Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09233.t1 | XP_003630495.1 | 74.6 | 236 | 56 | 2 | 1 | 233 | 1 | 235 | 1.10E-78 | 303.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09233.t1 | G7LHA8 | 74.6 | 236 | 56 | 2 | 1 | 233 | 1 | 235 | 7.8e-79 | 303.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene09233 | 0.845166 | 4.81E-59 | -1.69E-46 |
| MS.gene049343 | MS.gene09233 | 0.81752 | 3.16E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene09233 | 0.814009 | 1.92E-51 | -1.69E-46 |
| MS.gene049666 | MS.gene09233 | 0.843934 | 1.03E-58 | -1.69E-46 |
| MS.gene049825 | MS.gene09233 | 0.835822 | 1.34E-56 | -1.69E-46 |
| MS.gene049873 | MS.gene09233 | 0.832287 | 1.03E-55 | -1.69E-46 |
| MS.gene049977 | MS.gene09233 | 0.805773 | 1.14E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene09233 | 0.860469 | 2.02E-63 | -1.69E-46 |
| MS.gene050156 | MS.gene09233 | 0.806025 | 1.01E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene09233 | 0.825372 | 4.86E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene09233 | 0.801812 | 7.55E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene09233 | 0.804468 | 2.13E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene09233 | 0.807042 | 6.13E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene09233 | 0.821793 | 3.34E-53 | -1.69E-46 |
| MS.gene051332 | MS.gene09233 | 0.806262 | 8.96E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene09233 | 0.862618 | 4.46E-64 | -1.69E-46 |
| MS.gene051700 | MS.gene09233 | 0.812889 | 3.38E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene09233 | 0.838616 | 2.59E-57 | -1.69E-46 |
| MS.gene051957 | MS.gene09233 | 0.817844 | 2.67E-52 | -1.69E-46 |
| MS.gene052208 | MS.gene09233 | 0.820666 | 6.08E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene09233 | 0.859062 | 5.36E-63 | -1.69E-46 |
| MS.gene052534 | MS.gene09233 | 0.829179 | 5.95E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene09233 | 0.862779 | 3.98E-64 | -1.69E-46 |
| MS.gene052584 | MS.gene09233 | 0.87398 | 9.65E-68 | -1.69E-46 |
| MS.gene052586 | MS.gene09233 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene052685 | MS.gene09233 | 0.829998 | 3.76E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene09233 | 0.821271 | 4.41E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene09233 | 0.810318 | 1.22E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene09233 | 0.807288 | 5.44E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene09233 | 0.800601 | 1.33E-48 | -1.69E-46 |
| MS.gene053145 | MS.gene09233 | 0.805965 | 1.03E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene09233 | 0.87312 | 1.88E-67 | -1.69E-46 |
| MS.gene053592 | MS.gene09233 | 0.812215 | 4.74E-51 | -1.69E-46 |
| MS.gene05365 | MS.gene09233 | 0.841697 | 4.06E-58 | -1.69E-46 |
| MS.gene053974 | MS.gene09233 | 0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene09233 | 0.802508 | 5.43E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene09233 | 0.805053 | 1.61E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene09233 | 0.814793 | 1.29E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene09233 | 0.811201 | 7.88E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene09233 | 0.810183 | 1.31E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene09233 | 0.802552 | 5.32E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene09233 | 0.867196 | 1.64E-65 | -1.69E-46 |
| MS.gene054775 | MS.gene09233 | 0.845942 | 2.96E-59 | -1.69E-46 |
| MS.gene054967 | MS.gene09233 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene054991 | MS.gene09233 | 0.818965 | 1.49E-52 | -1.69E-46 |
| MS.gene055166 | MS.gene09233 | 0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene09233 | 0.80736 | 5.25E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene09233 | 0.828937 | 6.81E-55 | -1.69E-46 |
| MS.gene055694 | MS.gene09233 | 0.803282 | 3.76E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene09233 | 0.845419 | 4.11E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene09233 | 0.82806 | 1.11E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene09233 | 0.831163 | 1.95E-55 | -1.69E-46 |
| MS.gene056091 | MS.gene09233 | 0.806122 | 9.59E-50 | -1.69E-46 |
| MS.gene056162 | MS.gene09233 | 0.81212 | 4.98E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene09233 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene09233 | 0.839305 | 1.72E-57 | -1.69E-46 |
| MS.gene056215 | MS.gene09233 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene09233 | 0.811979 | 5.34E-51 | -1.69E-46 |
| MS.gene056498 | MS.gene09233 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene09233 | 0.817887 | 2.61E-52 | -1.69E-46 |
| MS.gene05659 | MS.gene09233 | 0.825724 | 4.01E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene09233 | 0.8346 | 2.73E-56 | -1.69E-46 |
| MS.gene05689 | MS.gene09233 | 0.820248 | 7.58E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene09233 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene09233 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene057027 | MS.gene09233 | 0.826769 | 2.26E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene09233 | 0.807669 | 4.52E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene09233 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene057314 | MS.gene09233 | 0.824865 | 6.40E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene09233 | 0.821308 | 4.33E-53 | -1.69E-46 |
| MS.gene057598 | MS.gene09233 | 0.814573 | 1.44E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene09233 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene09233 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene09233 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene09233 | 0.863657 | 2.13E-64 | -1.69E-46 |
| MS.gene058548 | MS.gene09233 | 0.804251 | 2.36E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene09233 | 0.849867 | 2.45E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene09233 | 0.820868 | 5.46E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene09233 | 0.834096 | 3.65E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene09233 | 0.830598 | 2.68E-55 | -1.69E-46 |
| MS.gene05954 | MS.gene09233 | 0.845888 | 3.07E-59 | -1.69E-46 |
| MS.gene059602 | MS.gene09233 | 0.805349 | 1.39E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene09233 | 0.865513 | 5.59E-65 | -1.69E-46 |
| MS.gene059842 | MS.gene09233 | 0.815903 | 7.28E-52 | -1.69E-46 |
| MS.gene059935 | MS.gene09233 | 0.851547 | 8.27E-61 | -1.69E-46 |
| MS.gene060258 | MS.gene09233 | 0.81148 | 6.85E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene09233 | 0.825352 | 4.91E-54 | -1.69E-46 |
| MS.gene060429 | MS.gene09233 | 0.827786 | 1.29E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene09233 | 0.852313 | 5.01E-61 | -1.69E-46 |
| MS.gene060716 | MS.gene09233 | 0.805749 | 1.15E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene09233 | -0.801059 | 1.08E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09233.t1 | MTR_8g097140 | 84.746 | 236 | 32 | 2 | 1 | 233 | 1 | 235 | 2.58e-134 | 377 |
| MS.gene09233.t1 | MTR_1g016270 | 47.909 | 263 | 85 | 8 | 3 | 218 | 4 | 261 | 1.97e-57 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 50 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAAATTGGAGAAAATTT+TGG | 0.213621 | 4.1:-14895048 | None:intergenic |
| AAATTCAATCAAGAAGTTAA+TGG | 0.280474 | 4.1:+14895281 | MS.gene09233:CDS |
| GGAGGCTATGATGTTATTCT+TGG | 0.292173 | 4.1:+14895092 | MS.gene09233:CDS |
| TCTGCTGACAATGGTGCTTC+AGG | 0.313597 | 4.1:+14895071 | MS.gene09233:CDS |
| AAAGAGTTTCGCAATGTTGA+TGG | 0.379797 | 4.1:+14895236 | MS.gene09233:CDS |
| GATTCACAACGACCGGTAAT+CGG | 0.388566 | 4.1:-14894996 | None:intergenic |
| CGAAATTCGATGCCGATTAC+CGG | 0.390204 | 4.1:+14894984 | None:intergenic |
| TGGAGGGCCGATGGGTCCTC+GGG | 0.410669 | 4.1:+14895529 | MS.gene09233:CDS |
| GTTTAAGTTCCTTGTGAAGC+TGG | 0.424424 | 4.1:-14895145 | None:intergenic |
| GTCCTCGGGACATAGAAATT+AGG | 0.434748 | 4.1:+14895543 | MS.gene09233:CDS |
| GTGGAGGGCCGATGGGTCCT+CGG | 0.438544 | 4.1:+14895528 | MS.gene09233:CDS |
| AACTTTATGCTGCGGAGAAA+AGG | 0.440522 | 4.1:+14895600 | MS.gene09233:CDS |
| ATTGTCAGCAGAGACAAAAT+TGG | 0.442188 | 4.1:-14895060 | None:intergenic |
| TTAAACTATCAAAATCTCAT+AGG | 0.445350 | 4.1:+14895162 | MS.gene09233:CDS |
| GAGAGAATTGAAAGTATGTC+GGG | 0.447028 | 4.1:+14895641 | MS.gene09233:CDS |
| CGGAGGGTTAGTTGCTCCTC+GGG | 0.449386 | 4.1:+14895361 | MS.gene09233:CDS |
| TATTCTTGGAAAGACTTTCA+AGG | 0.486432 | 4.1:+14895106 | MS.gene09233:CDS |
| AGAGAGAATTGAAAGTATGT+CGG | 0.498267 | 4.1:+14895640 | MS.gene09233:CDS |
| ACAAACAAGAAACTTGAAGT+AGG | 0.507231 | 4.1:+14895566 | MS.gene09233:CDS |
| TTTAGATGATTCACAACGAC+CGG | 0.509528 | 4.1:-14895003 | None:intergenic |
| TGCGAAGAGTGGAGGGCCGA+TGG | 0.514612 | 4.1:+14895520 | MS.gene09233:CDS |
| AAGAGTTTCGCAATGTTGAT+GGG | 0.523006 | 4.1:+14895237 | MS.gene09233:CDS |
| ATTCTTGGAAAGACTTTCAA+GGG | 0.523914 | 4.1:+14895107 | MS.gene09233:CDS |
| GGGACAAGAACAACAGAAAG+AGG | 0.527695 | 4.1:+14895475 | MS.gene09233:CDS |
| GCGAAGAGTGGAGGGCCGAT+GGG | 0.536215 | 4.1:+14895521 | MS.gene09233:CDS |
| CTCCTCGGGATGTAGAAGTC+AGG | 0.538589 | 4.1:+14895375 | MS.gene09233:CDS |
| TTTAGAAGTTGAAAATGCGA+AGG | 0.547721 | 4.1:+14895454 | MS.gene09233:CDS |
| GCGGAGGGTTAGTTGCTCCT+CGG | 0.558909 | 4.1:+14895360 | MS.gene09233:CDS |
| CAAACAAGAAACTTGAAGTA+GGG | 0.559654 | 4.1:+14895567 | MS.gene09233:CDS |
| AGCAATGATGCGAAGAGTGG+AGG | 0.563241 | 4.1:+14895512 | MS.gene09233:CDS |
| GCAATGATGCGAAGAGTGGA+GGG | 0.571141 | 4.1:+14895513 | MS.gene09233:CDS |
| GAATGAAGCCGTGAGTGAGA+AGG | 0.573910 | 4.1:+14895409 | MS.gene09233:CDS |
| TAAGAAGAAAATGAAACACT+AGG | 0.578476 | 4.1:+14895673 | MS.gene09233:CDS |
| TGAGAAGGAGAAAATGCAAA+GGG | 0.591298 | 4.1:+14895424 | MS.gene09233:CDS |
| AAGAAGAAAATGAAACACTA+GGG | 0.592449 | 4.1:+14895674 | MS.gene09233:CDS |
| GTCCTAATTTCTATGTCCCG+AGG | 0.595550 | 4.1:-14895545 | None:intergenic |
| TTCTAAGCAACAGAAAGAGA+TGG | 0.598515 | 4.1:+14895304 | MS.gene09233:CDS |
| CTAAGCAATGATGCGAAGAG+TGG | 0.602938 | 4.1:+14895509 | MS.gene09233:CDS |
| CTTGCTCAACCAGCTTCACA+AGG | 0.605167 | 4.1:+14895136 | MS.gene09233:CDS |
| AAAGATAAGTAACAATGCGA+AGG | 0.605305 | 4.1:+14895331 | MS.gene09233:CDS |
| TCTATGTCCCGAGGACCCAT+CGG | 0.610923 | 4.1:-14895536 | None:intergenic |
| TTAGAAGTTGAAAATGCGAA+GGG | 0.610992 | 4.1:+14895455 | MS.gene09233:CDS |
| GCTGACAATGGTGCTTCAGG+AGG | 0.622331 | 4.1:+14895074 | MS.gene09233:CDS |
| GAGAAAAGGAAGAATCAAGA+TGG | 0.623121 | 4.1:+14895614 | MS.gene09233:CDS |
| GACCTGACTTCTACATCCCG+AGG | 0.639086 | 4.1:-14895377 | None:intergenic |
| GTGAGAAGGAGAAAATGCAA+AGG | 0.641271 | 4.1:+14895423 | MS.gene09233:CDS |
| AATGCGAAGGTTGAAAGCGG+AGG | 0.641854 | 4.1:+14895344 | MS.gene09233:CDS |
| ATGCGAAGGTTGAAAGCGGA+GGG | 0.642455 | 4.1:+14895345 | MS.gene09233:CDS |
| TGAGAGTAAACTTTATGCTG+CGG | 0.645952 | 4.1:+14895592 | MS.gene09233:CDS |
| AACAATGCGAAGGTTGAAAG+CGG | 0.662379 | 4.1:+14895341 | MS.gene09233:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCAATCAAGAAGTTAA+TGG | + | chr4.1:14895281-14895300 | MS.gene09233:CDS | 20.0% |
| !! | TTAAACTATCAAAATCTCAT+AGG | + | chr4.1:14895162-14895181 | MS.gene09233:CDS | 20.0% |
| !! | GACAAAATTGGAGAAAATTT+TGG | - | chr4.1:14895051-14895070 | None:intergenic | 25.0% |
| AAAGATAAGTAACAATGCGA+AGG | + | chr4.1:14895331-14895350 | MS.gene09233:CDS | 30.0% | |
| ACAAACAAGAAACTTGAAGT+AGG | + | chr4.1:14895566-14895585 | MS.gene09233:CDS | 30.0% | |
| ATTCTTGGAAAGACTTTCAA+GGG | + | chr4.1:14895107-14895126 | MS.gene09233:CDS | 30.0% | |
| CAAACAAGAAACTTGAAGTA+GGG | + | chr4.1:14895567-14895586 | MS.gene09233:CDS | 30.0% | |
| TATTCTTGGAAAGACTTTCA+AGG | + | chr4.1:14895106-14895125 | MS.gene09233:CDS | 30.0% | |
| TTAGAAGTTGAAAATGCGAA+GGG | + | chr4.1:14895455-14895474 | MS.gene09233:CDS | 30.0% | |
| TTTAGAAGTTGAAAATGCGA+AGG | + | chr4.1:14895454-14895473 | MS.gene09233:CDS | 30.0% | |
| ! | AGAGAGAATTGAAAGTATGT+CGG | + | chr4.1:14895640-14895659 | MS.gene09233:CDS | 30.0% |
| AAAGAGTTTCGCAATGTTGA+TGG | + | chr4.1:14895236-14895255 | MS.gene09233:CDS | 35.0% | |
| AAGAGTTTCGCAATGTTGAT+GGG | + | chr4.1:14895237-14895256 | MS.gene09233:CDS | 35.0% | |
| ATTGTCAGCAGAGACAAAAT+TGG | - | chr4.1:14895063-14895082 | None:intergenic | 35.0% | |
| GAGAAAAGGAAGAATCAAGA+TGG | + | chr4.1:14895614-14895633 | MS.gene09233:CDS | 35.0% | |
| TAGAAGTCAGGTCAAAAAAG+AGG | + | chr4.1:14895387-14895406 | MS.gene09233:CDS | 35.0% | |
| TGAGAAGGAGAAAATGCAAA+GGG | + | chr4.1:14895424-14895443 | MS.gene09233:CDS | 35.0% | |
| TGAGAGTAAACTTTATGCTG+CGG | + | chr4.1:14895592-14895611 | MS.gene09233:CDS | 35.0% | |
| TTCTAAGCAACAGAAAGAGA+TGG | + | chr4.1:14895304-14895323 | MS.gene09233:CDS | 35.0% | |
| TTTAGATGATTCACAACGAC+CGG | - | chr4.1:14895006-14895025 | None:intergenic | 35.0% | |
| ! | AATTTTGTCTCTGCTGACAA+TGG | + | chr4.1:14895062-14895081 | MS.gene09233:CDS | 35.0% |
| ! | GAGAGAATTGAAAGTATGTC+GGG | + | chr4.1:14895641-14895660 | MS.gene09233:CDS | 35.0% |
| AACAATGCGAAGGTTGAAAG+CGG | + | chr4.1:14895341-14895360 | MS.gene09233:CDS | 40.0% | |
| AACTTTATGCTGCGGAGAAA+AGG | + | chr4.1:14895600-14895619 | MS.gene09233:CDS | 40.0% | |
| GGAGGCTATGATGTTATTCT+TGG | + | chr4.1:14895092-14895111 | MS.gene09233:CDS | 40.0% | |
| GTGAGAAGGAGAAAATGCAA+AGG | + | chr4.1:14895423-14895442 | MS.gene09233:CDS | 40.0% | |
| ! | CATTTTCTCCTTCTCACTCA+CGG | - | chr4.1:14895420-14895439 | None:intergenic | 40.0% |
| ! | GTTTAAGTTCCTTGTGAAGC+TGG | - | chr4.1:14895148-14895167 | None:intergenic | 40.0% |
| CTAAGCAATGATGCGAAGAG+TGG | + | chr4.1:14895509-14895528 | MS.gene09233:CDS | 45.0% | |
| GATTCACAACGACCGGTAAT+CGG | - | chr4.1:14894999-14895018 | None:intergenic | 45.0% | |
| GGGACAAGAACAACAGAAAG+AGG | + | chr4.1:14895475-14895494 | MS.gene09233:CDS | 45.0% | |
| GTCCTAATTTCTATGTCCCG+AGG | - | chr4.1:14895548-14895567 | None:intergenic | 45.0% | |
| GTCCTCGGGACATAGAAATT+AGG | + | chr4.1:14895543-14895562 | MS.gene09233:CDS | 45.0% | |
| !! | GGAGAAAATTTTGGCAGCTC+TGG | - | chr4.1:14895042-14895061 | None:intergenic | 45.0% |
| AATGCGAAGGTTGAAAGCGG+AGG | + | chr4.1:14895344-14895363 | MS.gene09233:CDS | 50.0% | |
| AGCAATGATGCGAAGAGTGG+AGG | + | chr4.1:14895512-14895531 | MS.gene09233:CDS | 50.0% | |
| ATGCGAAGGTTGAAAGCGGA+GGG | + | chr4.1:14895345-14895364 | MS.gene09233:CDS | 50.0% | |
| CTTGCTCAACCAGCTTCACA+AGG | + | chr4.1:14895136-14895155 | MS.gene09233:CDS | 50.0% | |
| GAATGAAGCCGTGAGTGAGA+AGG | + | chr4.1:14895409-14895428 | MS.gene09233:CDS | 50.0% | |
| GCAATGATGCGAAGAGTGGA+GGG | + | chr4.1:14895513-14895532 | MS.gene09233:CDS | 50.0% | |
| TCTGCTGACAATGGTGCTTC+AGG | + | chr4.1:14895071-14895090 | MS.gene09233:CDS | 50.0% | |
| CTCCTCGGGATGTAGAAGTC+AGG | + | chr4.1:14895375-14895394 | MS.gene09233:CDS | 55.0% | |
| GACCTGACTTCTACATCCCG+AGG | - | chr4.1:14895380-14895399 | None:intergenic | 55.0% | |
| GCTGACAATGGTGCTTCAGG+AGG | + | chr4.1:14895074-14895093 | MS.gene09233:CDS | 55.0% | |
| TCTATGTCCCGAGGACCCAT+CGG | - | chr4.1:14895539-14895558 | None:intergenic | 55.0% | |
| !! | CGGAGGGTTAGTTGCTCCTC+GGG | + | chr4.1:14895361-14895380 | MS.gene09233:CDS | 60.0% |
| !! | GCGGAGGGTTAGTTGCTCCT+CGG | + | chr4.1:14895360-14895379 | MS.gene09233:CDS | 60.0% |
| GCGAAGAGTGGAGGGCCGAT+GGG | + | chr4.1:14895521-14895540 | MS.gene09233:CDS | 65.0% | |
| TGCGAAGAGTGGAGGGCCGA+TGG | + | chr4.1:14895520-14895539 | MS.gene09233:CDS | 65.0% | |
| GTGGAGGGCCGATGGGTCCT+CGG | + | chr4.1:14895528-14895547 | MS.gene09233:CDS | 70.0% | |
| TGGAGGGCCGATGGGTCCTC+GGG | + | chr4.1:14895529-14895548 | MS.gene09233:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14894993 | 14895694 | 14894993 | ID=MS.gene09233 |
| chr4.1 | mRNA | 14894993 | 14895694 | 14894993 | ID=MS.gene09233.t1;Parent=MS.gene09233 |
| chr4.1 | exon | 14894993 | 14895694 | 14894993 | ID=MS.gene09233.t1.exon1;Parent=MS.gene09233.t1 |
| chr4.1 | CDS | 14894993 | 14895694 | 14894993 | ID=cds.MS.gene09233.t1;Parent=MS.gene09233.t1 |
| Gene Sequence |
| Protein sequence |
