Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08862.t1 | XP_003630495.1 | 73.3 | 236 | 59 | 2 | 1 | 233 | 1 | 235 | 1.00E-76 | 296.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08862.t1 | G7LHA8 | 73.3 | 236 | 59 | 2 | 1 | 233 | 1 | 235 | 7.3e-77 | 296.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene08862 | 0.844758 | 6.20E-59 | -1.69E-46 |
| MS.gene049499 | MS.gene08862 | 0.822415 | 2.40E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene08862 | 0.846684 | 1.86E-59 | -1.69E-46 |
| MS.gene049824 | MS.gene08862 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene08862 | 0.829152 | 6.04E-55 | -1.69E-46 |
| MS.gene049873 | MS.gene08862 | 0.840099 | 1.07E-57 | -1.69E-46 |
| MS.gene049977 | MS.gene08862 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene08862 | 0.832092 | 1.15E-55 | -1.69E-46 |
| MS.gene050355 | MS.gene08862 | 0.816446 | 5.51E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene08862 | 0.81779 | 2.75E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene08862 | 0.81173 | 6.05E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene08862 | 0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene08862 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene08862 | 0.821217 | 4.54E-53 | -1.69E-46 |
| MS.gene051332 | MS.gene08862 | 0.819311 | 1.24E-52 | -1.69E-46 |
| MS.gene051363 | MS.gene08862 | 0.832127 | 1.13E-55 | -1.69E-46 |
| MS.gene051365 | MS.gene08862 | 0.804714 | 1.89E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene08862 | 0.840818 | 6.92E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene08862 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene08862 | 0.820947 | 5.24E-53 | -1.69E-46 |
| MS.gene051957 | MS.gene08862 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene08862 | 0.804882 | 1.75E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene08862 | 0.80725 | 5.54E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene08862 | 0.855089 | 7.97E-62 | -1.69E-46 |
| MS.gene052534 | MS.gene08862 | 0.823098 | 1.66E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene08862 | 0.851991 | 6.19E-61 | -1.69E-46 |
| MS.gene052584 | MS.gene08862 | 0.867154 | 1.69E-65 | -1.69E-46 |
| MS.gene052586 | MS.gene08862 | 0.817619 | 3.00E-52 | -1.69E-46 |
| MS.gene052685 | MS.gene08862 | 0.828286 | 9.78E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene08862 | 0.820393 | 7.02E-53 | -1.69E-46 |
| MS.gene052954 | MS.gene08862 | 0.812286 | 4.58E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene08862 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene08862 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene08862 | 0.822572 | 2.20E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene08862 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene08862 | 0.874627 | 5.83E-68 | -1.69E-46 |
| MS.gene053294 | MS.gene08862 | 0.803985 | 2.68E-49 | -1.69E-46 |
| MS.gene053321 | MS.gene08862 | 0.805517 | 1.29E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene08862 | 0.8515 | 8.53E-61 | -1.69E-46 |
| MS.gene053931 | MS.gene08862 | 0.804116 | 2.52E-49 | -1.69E-46 |
| MS.gene053953 | MS.gene08862 | 0.80718 | 5.73E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene08862 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene08862 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene08862 | 0.867007 | 1.88E-65 | -1.69E-46 |
| MS.gene054775 | MS.gene08862 | 0.820306 | 7.36E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene08862 | 0.813553 | 2.41E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene08862 | 0.817774 | 2.77E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene08862 | 0.800079 | 1.71E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene08862 | 0.800528 | 1.38E-48 | -1.69E-46 |
| MS.gene055555 | MS.gene08862 | 0.816581 | 5.14E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene08862 | 0.819885 | 9.18E-53 | -1.69E-46 |
| MS.gene055589 | MS.gene08862 | 0.822667 | 2.10E-53 | -1.69E-46 |
| MS.gene055694 | MS.gene08862 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene08862 | 0.832592 | 8.66E-56 | -1.69E-46 |
| MS.gene055808 | MS.gene08862 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene08862 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene055841 | MS.gene08862 | 0.817548 | 3.12E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene08862 | 0.81876 | 1.66E-52 | -1.69E-46 |
| MS.gene056091 | MS.gene08862 | 0.823029 | 1.73E-53 | -1.69E-46 |
| MS.gene056162 | MS.gene08862 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene08862 | 0.836827 | 7.45E-57 | -1.69E-46 |
| MS.gene056215 | MS.gene08862 | 0.812175 | 4.84E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene08862 | 0.801436 | 9.01E-49 | -1.69E-46 |
| MS.gene056498 | MS.gene08862 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene08862 | 0.816575 | 5.15E-52 | -1.69E-46 |
| MS.gene05659 | MS.gene08862 | 0.827767 | 1.30E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene08862 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene08862 | 0.826608 | 2.47E-54 | -1.69E-46 |
| MS.gene05689 | MS.gene08862 | 0.84196 | 3.46E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene08862 | 0.811501 | 6.78E-51 | -1.69E-46 |
| MS.gene057027 | MS.gene08862 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene08862 | 0.807769 | 4.30E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene08862 | 0.806074 | 9.81E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene08862 | 0.856658 | 2.77E-62 | -1.69E-46 |
| MS.gene057314 | MS.gene08862 | 0.811633 | 6.35E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene08862 | 0.81221 | 4.75E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene08862 | 0.820998 | 5.10E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene08862 | 0.818827 | 1.60E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene08862 | 0.822964 | 1.79E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene08862 | 0.825727 | 4.00E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene08862 | 0.85051 | 1.62E-60 | -1.69E-46 |
| MS.gene058548 | MS.gene08862 | 0.812992 | 3.21E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene08862 | 0.846118 | 2.66E-59 | -1.69E-46 |
| MS.gene058781 | MS.gene08862 | 0.809702 | 1.66E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene08862 | 0.840222 | 9.90E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene08862 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene059272 | MS.gene08862 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene05953 | MS.gene08862 | 0.805364 | 1.38E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene08862 | 0.863511 | 2.36E-64 | -1.69E-46 |
| MS.gene059625 | MS.gene08862 | 0.850056 | 2.17E-60 | -1.69E-46 |
| MS.gene05979 | MS.gene08862 | 0.807837 | 4.16E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene08862 | 0.816448 | 5.50E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene08862 | -0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene08862 | 0.865231 | 6.86E-65 | -1.69E-46 |
| MS.gene060365 | MS.gene08862 | 0.84545 | 4.03E-59 | -1.69E-46 |
| MS.gene060429 | MS.gene08862 | 0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene060521 | MS.gene08862 | 0.846447 | 2.16E-59 | -1.69E-46 |
| MS.gene060572 | MS.gene08862 | 0.800967 | 1.12E-48 | -1.69E-46 |
| MS.gene060716 | MS.gene08862 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene08862 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene08862 | 0.814131 | 1.80E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08862.t1 | MTR_8g097140 | 84.322 | 236 | 33 | 2 | 1 | 233 | 1 | 235 | 1.96e-133 | 375 |
| MS.gene08862.t1 | MTR_1g016270 | 47.909 | 263 | 85 | 7 | 3 | 218 | 4 | 261 | 8.30e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 49 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAAATTGGAGAAAATTT+TGG | 0.213621 | 4.2:-13739214 | None:intergenic |
| GGAGGCTATGATGTTATTCT+TGG | 0.292173 | 4.2:+13739258 | MS.gene08862:CDS |
| TCTGCTGACAATGGTGCTTC+AGG | 0.313597 | 4.2:+13739237 | MS.gene08862:CDS |
| AAAGAGTTTCGCAATGTTGA+TGG | 0.333069 | 4.2:+13739402 | MS.gene08862:CDS |
| GATTCACAACGACCGGTAAT+CGG | 0.388566 | 4.2:-13739162 | None:intergenic |
| CGAAATTCGATGCCGATTAC+CGG | 0.390204 | 4.2:+13739150 | None:intergenic |
| TGGAGGGCCGATGGGTCCTC+GGG | 0.410669 | 4.2:+13739695 | MS.gene08862:CDS |
| GTTTAAGTTCCTTGTGAAGC+TGG | 0.424424 | 4.2:-13739311 | None:intergenic |
| GTCCTCGGGACATAGAAATT+AGG | 0.434748 | 4.2:+13739709 | MS.gene08862:CDS |
| AAATTCAATCAAGAAGTTAG+TGG | 0.438478 | 4.2:+13739447 | MS.gene08862:CDS |
| GTGGAGGGCCGATGGGTCCT+CGG | 0.438544 | 4.2:+13739694 | MS.gene08862:CDS |
| AACTTTATGCTGCGGAGAAA+AGG | 0.440522 | 4.2:+13739766 | MS.gene08862:CDS |
| ATTGTCAGCAGAGACAAAAT+TGG | 0.442188 | 4.2:-13739226 | None:intergenic |
| TTAAACTATCAAAATCTCAT+AGG | 0.445350 | 4.2:+13739328 | MS.gene08862:CDS |
| GAGAGAATTGAAAGTATGTC+GGG | 0.447028 | 4.2:+13739807 | MS.gene08862:CDS |
| CGGAGGGTTAGTTGCTCCTC+GGG | 0.449386 | 4.2:+13739527 | MS.gene08862:CDS |
| TATTCTTGGAAAGACTTTCA+AGG | 0.486432 | 4.2:+13739272 | MS.gene08862:CDS |
| AGAGAGAATTGAAAGTATGT+CGG | 0.498267 | 4.2:+13739806 | MS.gene08862:CDS |
| ACAAACAAGAAACTTGAAGT+AGG | 0.507231 | 4.2:+13739732 | MS.gene08862:CDS |
| TTTAGATGATTCACAACGAC+CGG | 0.509528 | 4.2:-13739169 | None:intergenic |
| TGCGAAGAGTGGAGGGCCGA+TGG | 0.514612 | 4.2:+13739686 | MS.gene08862:CDS |
| ATTCTTGGAAAGACTTTCAA+GGG | 0.523914 | 4.2:+13739273 | MS.gene08862:CDS |
| GGGACAAGAACAACAGAAAG+AGG | 0.527695 | 4.2:+13739641 | MS.gene08862:CDS |
| GCGAAGAGTGGAGGGCCGAT+GGG | 0.536215 | 4.2:+13739687 | MS.gene08862:CDS |
| CTCCTCGGGATGTAGAAGTC+AGG | 0.538589 | 4.2:+13739541 | MS.gene08862:CDS |
| TTTAGAAGTTGAAAATGCGA+AGG | 0.547721 | 4.2:+13739620 | MS.gene08862:CDS |
| GCGGAGGGTTAGTTGCTCCT+CGG | 0.558909 | 4.2:+13739526 | MS.gene08862:CDS |
| CAAACAAGAAACTTGAAGTA+GGG | 0.559654 | 4.2:+13739733 | MS.gene08862:CDS |
| AGCAATGATGCGAAGAGTGG+AGG | 0.563241 | 4.2:+13739678 | MS.gene08862:CDS |
| GCAATGATGCGAAGAGTGGA+GGG | 0.571141 | 4.2:+13739679 | MS.gene08862:CDS |
| GAATGAAGCCGTGAGTGAGA+AGG | 0.573910 | 4.2:+13739575 | MS.gene08862:CDS |
| TAAGAAGAAAATGAAACACT+AGG | 0.578476 | 4.2:+13739839 | MS.gene08862:CDS |
| TGAGAAGGAGAAAATGCAAA+GGG | 0.591298 | 4.2:+13739590 | MS.gene08862:CDS |
| AAGAAGAAAATGAAACACTA+GGG | 0.592449 | 4.2:+13739840 | MS.gene08862:CDS |
| GTCCTAATTTCTATGTCCCG+AGG | 0.595550 | 4.2:-13739711 | None:intergenic |
| TTCTAAGCAACAGAAAGAGA+TGG | 0.598515 | 4.2:+13739470 | MS.gene08862:CDS |
| CTAAGCAATGATGCGAAGAG+TGG | 0.602938 | 4.2:+13739675 | MS.gene08862:CDS |
| CTTGCTCAACCAGCTTCACA+AGG | 0.605167 | 4.2:+13739302 | MS.gene08862:CDS |
| AAAGATAAGTAACAATGCGA+AGG | 0.605305 | 4.2:+13739497 | MS.gene08862:CDS |
| TCTATGTCCCGAGGACCCAT+CGG | 0.610923 | 4.2:-13739702 | None:intergenic |
| TTAGAAGTTGAAAATGCGAA+GGG | 0.610992 | 4.2:+13739621 | MS.gene08862:CDS |
| GCTGACAATGGTGCTTCAGG+AGG | 0.622331 | 4.2:+13739240 | MS.gene08862:CDS |
| GAGAAAAGGAAGAATCAAGA+TGG | 0.623121 | 4.2:+13739780 | MS.gene08862:CDS |
| GACCTGACTTCTACATCCCG+AGG | 0.639086 | 4.2:-13739543 | None:intergenic |
| GTGAGAAGGAGAAAATGCAA+AGG | 0.641271 | 4.2:+13739589 | MS.gene08862:CDS |
| AATGCGAAGGTTGAAAGCGG+AGG | 0.641854 | 4.2:+13739510 | MS.gene08862:CDS |
| ATGCGAAGGTTGAAAGCGGA+GGG | 0.642455 | 4.2:+13739511 | MS.gene08862:CDS |
| TGAGAGTAAACTTTATGCTG+CGG | 0.645952 | 4.2:+13739758 | MS.gene08862:CDS |
| AACAATGCGAAGGTTGAAAG+CGG | 0.662379 | 4.2:+13739507 | MS.gene08862:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAACTATCAAAATCTCAT+AGG | + | chr4.2:13739328-13739347 | MS.gene08862:CDS | 20.0% |
| ! | AAATTCAATCAAGAAGTTAG+TGG | + | chr4.2:13739447-13739466 | MS.gene08862:CDS | 25.0% |
| !! | GACAAAATTGGAGAAAATTT+TGG | - | chr4.2:13739217-13739236 | None:intergenic | 25.0% |
| AAAGATAAGTAACAATGCGA+AGG | + | chr4.2:13739497-13739516 | MS.gene08862:CDS | 30.0% | |
| ACAAACAAGAAACTTGAAGT+AGG | + | chr4.2:13739732-13739751 | MS.gene08862:CDS | 30.0% | |
| ATTCTTGGAAAGACTTTCAA+GGG | + | chr4.2:13739273-13739292 | MS.gene08862:CDS | 30.0% | |
| CAAACAAGAAACTTGAAGTA+GGG | + | chr4.2:13739733-13739752 | MS.gene08862:CDS | 30.0% | |
| TATTCTTGGAAAGACTTTCA+AGG | + | chr4.2:13739272-13739291 | MS.gene08862:CDS | 30.0% | |
| TTAGAAGTTGAAAATGCGAA+GGG | + | chr4.2:13739621-13739640 | MS.gene08862:CDS | 30.0% | |
| TTTAGAAGTTGAAAATGCGA+AGG | + | chr4.2:13739620-13739639 | MS.gene08862:CDS | 30.0% | |
| ! | AGAGAGAATTGAAAGTATGT+CGG | + | chr4.2:13739806-13739825 | MS.gene08862:CDS | 30.0% |
| AAAGAGTTTCGCAATGTTGA+TGG | + | chr4.2:13739402-13739421 | MS.gene08862:CDS | 35.0% | |
| ATTGTCAGCAGAGACAAAAT+TGG | - | chr4.2:13739229-13739248 | None:intergenic | 35.0% | |
| GAGAAAAGGAAGAATCAAGA+TGG | + | chr4.2:13739780-13739799 | MS.gene08862:CDS | 35.0% | |
| TAGAAGTCAGGTCAAAAAAG+AGG | + | chr4.2:13739553-13739572 | MS.gene08862:CDS | 35.0% | |
| TGAGAAGGAGAAAATGCAAA+GGG | + | chr4.2:13739590-13739609 | MS.gene08862:CDS | 35.0% | |
| TGAGAGTAAACTTTATGCTG+CGG | + | chr4.2:13739758-13739777 | MS.gene08862:CDS | 35.0% | |
| TTCTAAGCAACAGAAAGAGA+TGG | + | chr4.2:13739470-13739489 | MS.gene08862:CDS | 35.0% | |
| TTTAGATGATTCACAACGAC+CGG | - | chr4.2:13739172-13739191 | None:intergenic | 35.0% | |
| ! | AATTTTGTCTCTGCTGACAA+TGG | + | chr4.2:13739228-13739247 | MS.gene08862:CDS | 35.0% |
| ! | GAGAGAATTGAAAGTATGTC+GGG | + | chr4.2:13739807-13739826 | MS.gene08862:CDS | 35.0% |
| AACAATGCGAAGGTTGAAAG+CGG | + | chr4.2:13739507-13739526 | MS.gene08862:CDS | 40.0% | |
| AACTTTATGCTGCGGAGAAA+AGG | + | chr4.2:13739766-13739785 | MS.gene08862:CDS | 40.0% | |
| GGAGGCTATGATGTTATTCT+TGG | + | chr4.2:13739258-13739277 | MS.gene08862:CDS | 40.0% | |
| GTGAGAAGGAGAAAATGCAA+AGG | + | chr4.2:13739589-13739608 | MS.gene08862:CDS | 40.0% | |
| ! | CATTTTCTCCTTCTCACTCA+CGG | - | chr4.2:13739586-13739605 | None:intergenic | 40.0% |
| ! | GTTTAAGTTCCTTGTGAAGC+TGG | - | chr4.2:13739314-13739333 | None:intergenic | 40.0% |
| CTAAGCAATGATGCGAAGAG+TGG | + | chr4.2:13739675-13739694 | MS.gene08862:CDS | 45.0% | |
| GATTCACAACGACCGGTAAT+CGG | - | chr4.2:13739165-13739184 | None:intergenic | 45.0% | |
| GGGACAAGAACAACAGAAAG+AGG | + | chr4.2:13739641-13739660 | MS.gene08862:CDS | 45.0% | |
| GTCCTAATTTCTATGTCCCG+AGG | - | chr4.2:13739714-13739733 | None:intergenic | 45.0% | |
| GTCCTCGGGACATAGAAATT+AGG | + | chr4.2:13739709-13739728 | MS.gene08862:CDS | 45.0% | |
| !! | GGAGAAAATTTTGGCAGCTC+TGG | - | chr4.2:13739208-13739227 | None:intergenic | 45.0% |
| AATGCGAAGGTTGAAAGCGG+AGG | + | chr4.2:13739510-13739529 | MS.gene08862:CDS | 50.0% | |
| AGCAATGATGCGAAGAGTGG+AGG | + | chr4.2:13739678-13739697 | MS.gene08862:CDS | 50.0% | |
| ATGCGAAGGTTGAAAGCGGA+GGG | + | chr4.2:13739511-13739530 | MS.gene08862:CDS | 50.0% | |
| CTTGCTCAACCAGCTTCACA+AGG | + | chr4.2:13739302-13739321 | MS.gene08862:CDS | 50.0% | |
| GAATGAAGCCGTGAGTGAGA+AGG | + | chr4.2:13739575-13739594 | MS.gene08862:CDS | 50.0% | |
| GCAATGATGCGAAGAGTGGA+GGG | + | chr4.2:13739679-13739698 | MS.gene08862:CDS | 50.0% | |
| TCTGCTGACAATGGTGCTTC+AGG | + | chr4.2:13739237-13739256 | MS.gene08862:CDS | 50.0% | |
| CTCCTCGGGATGTAGAAGTC+AGG | + | chr4.2:13739541-13739560 | MS.gene08862:CDS | 55.0% | |
| GACCTGACTTCTACATCCCG+AGG | - | chr4.2:13739546-13739565 | None:intergenic | 55.0% | |
| GCTGACAATGGTGCTTCAGG+AGG | + | chr4.2:13739240-13739259 | MS.gene08862:CDS | 55.0% | |
| TCTATGTCCCGAGGACCCAT+CGG | - | chr4.2:13739705-13739724 | None:intergenic | 55.0% | |
| !! | CGGAGGGTTAGTTGCTCCTC+GGG | + | chr4.2:13739527-13739546 | MS.gene08862:CDS | 60.0% |
| !! | GCGGAGGGTTAGTTGCTCCT+CGG | + | chr4.2:13739526-13739545 | MS.gene08862:CDS | 60.0% |
| GCGAAGAGTGGAGGGCCGAT+GGG | + | chr4.2:13739687-13739706 | MS.gene08862:CDS | 65.0% | |
| TGCGAAGAGTGGAGGGCCGA+TGG | + | chr4.2:13739686-13739705 | MS.gene08862:CDS | 65.0% | |
| GTGGAGGGCCGATGGGTCCT+CGG | + | chr4.2:13739694-13739713 | MS.gene08862:CDS | 70.0% | |
| TGGAGGGCCGATGGGTCCTC+GGG | + | chr4.2:13739695-13739714 | MS.gene08862:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13739159 | 13739860 | 13739159 | ID=MS.gene08862 |
| chr4.2 | mRNA | 13739159 | 13739860 | 13739159 | ID=MS.gene08862.t1;Parent=MS.gene08862 |
| chr4.2 | exon | 13739159 | 13739860 | 13739159 | ID=MS.gene08862.t1.exon1;Parent=MS.gene08862.t1 |
| chr4.2 | CDS | 13739159 | 13739860 | 13739159 | ID=cds.MS.gene08862.t1;Parent=MS.gene08862.t1 |
| Gene Sequence |
| Protein sequence |
