Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062121.t1 | RHN73728.1 | 96.2 | 523 | 20 | 0 | 1 | 523 | 1 | 523 | 1.20E-306 | 1061.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062121.t1 | Q9LMA1 | 62.0 | 510 | 192 | 2 | 12 | 520 | 11 | 519 | 1.8e-199 | 696.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062121.t1 | A0A396JBD7 | 96.2 | 523 | 20 | 0 | 1 | 523 | 1 | 523 | 8.4e-307 | 1061.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene062121 | -0.816077 | 6.66E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene062121 | 0.813127 | 3.00E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene062121 | -0.835813 | 1.35E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene062121 | -0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene062121 | -0.845642 | 3.57E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene062121 | -0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene062121 | -0.830083 | 3.59E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene062121 | -0.803906 | 2.79E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene062121 | -0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene062121 | 0.817517 | 3.17E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene062121 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene062121 | 0.841952 | 3.48E-58 | -1.69E-46 |
| MS.gene051366 | MS.gene062121 | 0.830914 | 2.25E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene062121 | 0.821522 | 3.86E-53 | -1.69E-46 |
| MS.gene051422 | MS.gene062121 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene062121 | -0.815643 | 8.32E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene062121 | -0.828397 | 9.20E-55 | -1.69E-46 |
| MS.gene052494 | MS.gene062121 | 0.801999 | 6.91E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene062121 | -0.81634 | 5.82E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene062121 | -0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene062121 | -0.827253 | 1.73E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene062121 | -0.817715 | 2.86E-52 | -1.69E-46 |
| MS.gene053083 | MS.gene062121 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene062121 | 0.811979 | 5.34E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene062121 | -0.819726 | 9.98E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene062121 | 0.813127 | 2.99E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene062121 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene062121 | 0.803651 | 3.15E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene062121 | -0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene062121 | -0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene054959 | MS.gene062121 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene062121 | -0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene062121 | -0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene062121 | -0.82545 | 4.66E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene062121 | -0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene062121 | 0.805242 | 1.47E-49 | -1.69E-46 |
| MS.gene056200 | MS.gene062121 | 0.822717 | 2.04E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene062121 | -0.848549 | 5.71E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene062121 | -0.819583 | 1.08E-52 | -1.69E-46 |
| MS.gene057261 | MS.gene062121 | 0.817579 | 3.07E-52 | -1.69E-46 |
| MS.gene05726 | MS.gene062121 | 0.837849 | 4.08E-57 | -1.69E-46 |
| MS.gene057499 | MS.gene062121 | 0.82126 | 4.44E-53 | -1.69E-46 |
| MS.gene057549 | MS.gene062121 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene062121 | 0.806821 | 6.83E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene062121 | 0.826485 | 2.64E-54 | -1.69E-46 |
| MS.gene058111 | MS.gene062121 | 0.841737 | 3.96E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene062121 | -0.842044 | 3.29E-58 | -1.69E-46 |
| MS.gene058268 | MS.gene062121 | 0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene058269 | MS.gene062121 | 0.823268 | 1.52E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene062121 | 0.818027 | 2.43E-52 | -1.69E-46 |
| MS.gene058382 | MS.gene062121 | 0.86837 | 6.87E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene062121 | -0.809254 | 2.07E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene062121 | -0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene062121 | -0.813603 | 2.35E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene062121 | -0.808109 | 3.64E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene062121 | -0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene062121 | -0.803089 | 4.12E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene062121 | 0.815208 | 1.04E-51 | -1.69E-46 |
| MS.gene059770 | MS.gene062121 | 0.803216 | 3.88E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene062121 | -0.805643 | 1.21E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene062121 | -0.806507 | 7.96E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene062121 | -0.826314 | 2.90E-54 | -1.69E-46 |
| MS.gene060187 | MS.gene062121 | 0.826006 | 3.44E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene062121 | 0.813296 | 2.75E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene062121 | 0.828883 | 7.02E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene062121 | -0.822404 | 2.41E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene062121 | -0.846309 | 2.36E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene062121 | -0.827116 | 1.87E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062121.t1 | MTR_2g044140 | 95.793 | 523 | 22 | 0 | 1 | 523 | 1 | 523 | 0.0 | 994 |
| MS.gene062121.t1 | MTR_2g043850 | 92.352 | 523 | 40 | 0 | 1 | 523 | 1 | 523 | 0.0 | 947 |
| MS.gene062121.t1 | MTR_2g020630 | 81.644 | 523 | 82 | 1 | 1 | 523 | 1 | 509 | 0.0 | 898 |
| MS.gene062121.t1 | MTR_4g124800 | 68.737 | 499 | 152 | 3 | 27 | 523 | 29 | 525 | 0.0 | 731 |
| MS.gene062121.t1 | MTR_2g450510 | 38.953 | 516 | 299 | 8 | 13 | 519 | 4 | 512 | 4.53e-132 | 394 |
| MS.gene062121.t1 | MTR_2g450310 | 41.875 | 480 | 268 | 8 | 13 | 486 | 4 | 478 | 1.71e-130 | 389 |
| MS.gene062121.t1 | MTR_1308s0010 | 42.208 | 154 | 88 | 1 | 239 | 391 | 4 | 157 | 3.02e-39 | 141 |
| MS.gene062121.t1 | MTR_1088s0010 | 36.029 | 136 | 83 | 3 | 13 | 145 | 4 | 138 | 2.79e-26 | 104 |
| MS.gene062121.t1 | MTR_1372s0010 | 53.333 | 75 | 35 | 0 | 158 | 232 | 5 | 79 | 8.00e-26 | 101 |
| MS.gene062121.t1 | MTR_6g037690 | 38.346 | 133 | 81 | 1 | 388 | 519 | 180 | 312 | 7.53e-24 | 102 |
| MS.gene062121.t1 | MTR_1g046230 | 26.178 | 382 | 218 | 16 | 6 | 381 | 16 | 339 | 4.77e-18 | 87.0 |
| MS.gene062121.t1 | MTR_8g037910 | 26.860 | 242 | 119 | 7 | 13 | 229 | 3 | 211 | 7.63e-17 | 81.3 |
| MS.gene062121.t1 | MTR_8g037910 | 26.860 | 242 | 119 | 7 | 13 | 229 | 3 | 211 | 1.38e-16 | 81.3 |
| MS.gene062121.t1 | MTR_8g037910 | 27.686 | 242 | 117 | 8 | 13 | 229 | 3 | 211 | 3.28e-16 | 81.3 |
| MS.gene062121.t1 | MTR_1g069275 | 26.216 | 370 | 210 | 16 | 16 | 381 | 27 | 337 | 1.93e-15 | 79.0 |
| MS.gene062121.t1 | MTR_2g044120 | 91.176 | 34 | 3 | 0 | 419 | 452 | 22 | 55 | 1.14e-14 | 69.3 |
| MS.gene062121.t1 | MTR_7g107710 | 27.966 | 236 | 126 | 9 | 16 | 246 | 8 | 204 | 1.23e-14 | 76.3 |
| MS.gene062121.t1 | MTR_7g099330 | 25.105 | 474 | 267 | 19 | 16 | 484 | 26 | 416 | 4.11e-14 | 74.7 |
| MS.gene062121.t1 | MTR_3g437580 | 29.167 | 240 | 121 | 9 | 14 | 227 | 13 | 229 | 8.13e-14 | 73.2 |
| MS.gene062121.t1 | MTR_3g437580 | 29.167 | 240 | 121 | 9 | 14 | 227 | 13 | 229 | 1.17e-13 | 73.6 |
| MS.gene062121.t1 | MTR_1g011630 | 24.054 | 370 | 215 | 14 | 16 | 381 | 18 | 325 | 2.30e-13 | 72.4 |
| MS.gene062121.t1 | MTR_4g124795 | 50.000 | 62 | 30 | 1 | 414 | 474 | 16 | 77 | 1.85e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062121.t1 | AT1G19250 | 61.598 | 513 | 195 | 2 | 9 | 520 | 8 | 519 | 0.0 | 697 |
| MS.gene062121.t1 | AT5G45180 | 55.876 | 485 | 174 | 4 | 12 | 496 | 11 | 455 | 0.0 | 572 |
| MS.gene062121.t1 | AT2G33230 | 27.202 | 386 | 190 | 20 | 16 | 381 | 34 | 348 | 2.78e-15 | 78.6 |
| MS.gene062121.t1 | AT1G04610 | 26.400 | 375 | 207 | 18 | 16 | 381 | 39 | 353 | 3.85e-14 | 75.1 |
| MS.gene062121.t1 | AT4G13260 | 26.104 | 249 | 144 | 9 | 16 | 262 | 30 | 240 | 1.80e-13 | 72.0 |
| MS.gene062121.t1 | AT4G13260 | 23.387 | 372 | 219 | 12 | 16 | 381 | 30 | 341 | 2.30e-13 | 72.4 |
| MS.gene062121.t1 | AT1G12200 | 27.027 | 259 | 134 | 8 | 1 | 231 | 1 | 232 | 2.91e-13 | 72.4 |
| MS.gene062121.t1 | AT1G12200 | 27.027 | 259 | 134 | 8 | 1 | 231 | 1 | 232 | 3.03e-13 | 72.0 |
| MS.gene062121.t1 | AT5G11320 | 25.543 | 368 | 210 | 15 | 16 | 381 | 19 | 324 | 6.54e-13 | 70.9 |
| MS.gene062121.t1 | AT5G11320 | 25.272 | 368 | 211 | 15 | 16 | 381 | 19 | 324 | 6.81e-13 | 70.5 |
| MS.gene062121.t1 | AT1G62620 | 23.887 | 247 | 134 | 7 | 14 | 233 | 13 | 232 | 5.49e-12 | 68.2 |
| MS.gene062121.t1 | AT1G62620 | 23.904 | 251 | 137 | 7 | 8 | 231 | 7 | 230 | 6.20e-12 | 68.2 |
| MS.gene062121.t1 | AT1G65860 | 26.190 | 252 | 124 | 11 | 9 | 231 | 8 | 226 | 6.89e-12 | 68.2 |
| MS.gene062121.t1 | AT1G62560 | 24.400 | 250 | 130 | 10 | 9 | 230 | 8 | 226 | 6.99e-12 | 67.8 |
| MS.gene062121.t1 | AT1G62560 | 24.303 | 251 | 131 | 10 | 9 | 231 | 8 | 227 | 8.44e-12 | 67.8 |
| MS.gene062121.t1 | AT1G63370 | 23.506 | 251 | 138 | 7 | 8 | 231 | 7 | 230 | 1.35e-11 | 67.0 |
| MS.gene062121.t1 | AT1G63370 | 23.320 | 253 | 140 | 7 | 8 | 233 | 7 | 232 | 1.54e-11 | 66.2 |
| MS.gene062121.t1 | AT5G61290 | 27.572 | 243 | 128 | 9 | 14 | 231 | 16 | 235 | 5.70e-11 | 65.1 |
Find 132 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTCATGCTGAGATTT+TGG | 0.081241 | 2.3:+45812643 | MS.gene062121:CDS |
| TCTTCCTCAAATGGGTGTTC+TGG | 0.276233 | 2.3:-45817228 | None:intergenic |
| AATGCTTTCACAAACAATTA+AGG | 0.289580 | 2.3:+45817923 | MS.gene062121:CDS |
| ATTGGACACTTCCACATTAT+AGG | 0.303294 | 2.3:+45816106 | MS.gene062121:CDS |
| CTAATTCAATTGGTGGTGTT+TGG | 0.306081 | 2.3:+45812525 | MS.gene062121:CDS |
| TGATGAAATATGTGAAGATT+TGG | 0.311891 | 2.3:+45818019 | MS.gene062121:CDS |
| TTGCGTCCGATTCATTAGTT+TGG | 0.314121 | 2.3:-45812835 | None:intergenic |
| CCAATTCTAGACACTATAAT+TGG | 0.315773 | 2.3:-45812425 | None:intergenic |
| ATTGTGCATGGTTGCCCTTC+TGG | 0.318883 | 2.3:-45816066 | None:intergenic |
| AAACTTCCGTTTGAGAAGTA+TGG | 0.319264 | 2.3:+45817198 | MS.gene062121:CDS |
| TAATGAATCGGACGCAATTC+AGG | 0.324489 | 2.3:+45812841 | MS.gene062121:CDS |
| TATTTACCATTGGAGATAAT+AGG | 0.327759 | 2.3:-45816227 | None:intergenic |
| GTGTCTAGAATTGGCATAAT+AGG | 0.345975 | 2.3:+45812434 | MS.gene062121:CDS |
| GATGCAAAATCTTCCTCAAA+TGG | 0.353751 | 2.3:-45817237 | None:intergenic |
| GGGAAAGAAGGTTGTGGTTG+TGG | 0.353865 | 2.3:+45813719 | MS.gene062121:CDS |
| TGAGCCTTTCTGTAGCTTGT+TGG | 0.361255 | 2.3:+45817452 | MS.gene062121:CDS |
| ATACGTTCCATGTGGCTTGC+TGG | 0.361433 | 2.3:+45817861 | MS.gene062121:CDS |
| AAGATTTGGGTTGGCATACT+TGG | 0.370246 | 2.3:+45818033 | MS.gene062121:CDS |
| AGCTACTAGTGACCTTGTTA+AGG | 0.378740 | 2.3:+45813698 | MS.gene062121:CDS |
| TTTGGAGACATTGTTCCTAT+AGG | 0.379655 | 2.3:+45812543 | MS.gene062121:CDS |
| CCAATTATAGTGTCTAGAAT+TGG | 0.380149 | 2.3:+45812425 | MS.gene062121:CDS |
| CCTCCACCAAACACCAAATC+AGG | 0.382770 | 2.3:+45816179 | MS.gene062121:CDS |
| AACACCACCAATTGAATTAG+TGG | 0.384296 | 2.3:-45812522 | None:intergenic |
| TTTGAAGCCACTAATTCAAT+TGG | 0.393284 | 2.3:+45812515 | MS.gene062121:CDS |
| TAACCCACAAAGGCCATGTT+TGG | 0.399285 | 2.3:-45817804 | None:intergenic |
| GATGTTGTTCTCCTTGCAAC+TGG | 0.404208 | 2.3:+45817393 | MS.gene062121:CDS |
| GTAAACCCTGATTTGGTGTT+TGG | 0.407304 | 2.3:-45816185 | None:intergenic |
| AGGAACTGCATCACAACATT+TGG | 0.413647 | 2.3:+45817984 | MS.gene062121:CDS |
| GGAAAGAAGGTTGTGGTTGT+GGG | 0.417388 | 2.3:+45813720 | MS.gene062121:CDS |
| GATGAAATATGTGAAGATTT+GGG | 0.417877 | 2.3:+45818020 | MS.gene062121:CDS |
| TGGTGGAAATGAAGTTTGTT+CGG | 0.419334 | 2.3:+45812729 | MS.gene062121:CDS |
| AAGTGGATTTCCGTGGTCAT+TGG | 0.424567 | 2.3:-45812783 | None:intergenic |
| GGTGGAAATGAAGTTTGTTC+GGG | 0.424789 | 2.3:+45812730 | MS.gene062121:CDS |
| GATTCCAAACATGGCCTTTG+TGG | 0.425206 | 2.3:+45817800 | MS.gene062121:CDS |
| AATTGTGTTTACCTGTATAG+TGG | 0.425289 | 2.3:-45817495 | None:intergenic |
| CTCCTTGCAACTGGTTATGA+TGG | 0.429093 | 2.3:+45817402 | MS.gene062121:CDS |
| ATCAAGTTTACAATAATCAA+TGG | 0.431413 | 2.3:-45813670 | None:intergenic |
| CATGGAAATGTTGGCATCAA+TGG | 0.446961 | 2.3:-45813606 | None:intergenic |
| ACCTTACCCTTGAACACCTC+AGG | 0.452350 | 2.3:-45813639 | None:intergenic |
| CAAGGGCCCTGAGGTGTTCA+AGG | 0.453652 | 2.3:+45813632 | MS.gene062121:CDS |
| CTTGAACACCTCAGGGCCCT+TGG | 0.455615 | 2.3:-45813631 | None:intergenic |
| GTGGTTTGCACTGGAAAATA+TGG | 0.455978 | 2.3:+45813576 | MS.gene062121:CDS |
| AGTGGATTTCCGTGGTCATT+GGG | 0.457189 | 2.3:-45812782 | None:intergenic |
| TTCAATCCATACTTCTCAAA+CGG | 0.458388 | 2.3:-45817204 | None:intergenic |
| CCCTGAGGTGTTCAAGGGTA+AGG | 0.458830 | 2.3:+45813638 | MS.gene062121:CDS |
| TTCTGTCCAAACTAATGAAT+CGG | 0.467681 | 2.3:+45812829 | MS.gene062121:CDS |
| CTGGTACCATGCCACTATAC+AGG | 0.469016 | 2.3:+45817484 | MS.gene062121:CDS |
| GCTACTAGTGACCTTGTTAA+GGG | 0.472706 | 2.3:+45813699 | MS.gene062121:CDS |
| CACTTCCACATTATAGGATG+TGG | 0.475745 | 2.3:+45816112 | MS.gene062121:CDS |
| AAGTTGCCTTGAGTGGCCAT+AGG | 0.476345 | 2.3:-45812401 | None:intergenic |
| GACCACGGAAATCCACTTCC+TGG | 0.476622 | 2.3:+45812788 | MS.gene062121:CDS |
| ATTCCAAACATGGCCTTTGT+GGG | 0.477703 | 2.3:+45817801 | MS.gene062121:CDS |
| AAACTTCATTTCCACCACTT+TGG | 0.481987 | 2.3:-45812723 | None:intergenic |
| TGACCTTGTTAAGGGAAAGA+AGG | 0.483185 | 2.3:+45813707 | MS.gene062121:CDS |
| GAAACCAGAACACCCATTTG+AGG | 0.486081 | 2.3:+45817224 | MS.gene062121:CDS |
| ACCTCAGGGCCCTTGGTGCA+TGG | 0.486162 | 2.3:-45813624 | None:intergenic |
| GTTTGCCTGTGCACATTCCA+TGG | 0.486634 | 2.3:-45813769 | None:intergenic |
| AACCATGCACAATGATCATA+AGG | 0.486955 | 2.3:+45816076 | MS.gene062121:CDS |
| ATGCAAAATCTTCCTCAAAT+GGG | 0.488179 | 2.3:-45817236 | None:intergenic |
| CACTTCCTGGTCGTCCTGTG+TGG | 0.488678 | 2.3:+45812801 | MS.gene062121:CDS |
| CCATCCATCGATTCCAAACA+TGG | 0.490544 | 2.3:+45817791 | MS.gene062121:CDS |
| TTATAGTCACCAGCAGTGTA+AGG | 0.496419 | 2.3:-45818089 | None:intergenic |
| GAAGCCACTAATTCAATTGG+TGG | 0.496741 | 2.3:+45812518 | MS.gene062121:CDS |
| AACCCTGATTTGGTGTTTGG+TGG | 0.497741 | 2.3:-45816182 | None:intergenic |
| GCATTTACTCCTTACACTGC+TGG | 0.499416 | 2.3:+45818080 | MS.gene062121:CDS |
| AGAATTGGCATAATAGGTGC+TGG | 0.502507 | 2.3:+45812440 | MS.gene062121:CDS |
| AGCTCCCACACAGGACGACC+AGG | 0.506825 | 2.3:-45812806 | None:intergenic |
| GAGTTTGTAGTGGTTTGCAC+TGG | 0.512700 | 2.3:+45813567 | MS.gene062121:CDS |
| AAGTTTGTTCGGGACAAAGA+AGG | 0.514045 | 2.3:+45812740 | MS.gene062121:CDS |
| CTGAAGCTTAGTACACCTAT+AGG | 0.515356 | 2.3:-45812558 | None:intergenic |
| TCCAAAATCTCAGCATGAGA+AGG | 0.520143 | 2.3:-45812644 | None:intergenic |
| ATGCCTCCTATTATCTCCAA+TGG | 0.520516 | 2.3:+45816221 | MS.gene062121:CDS |
| TGATCATAAGGAGTTTGCAT+TGG | 0.525875 | 2.3:+45816088 | MS.gene062121:CDS |
| CCTGATTTGGTGTTTGGTGG+AGG | 0.527093 | 2.3:-45816179 | None:intergenic |
| CAACCTTCTTTCCCTTAACA+AGG | 0.529813 | 2.3:-45813710 | None:intergenic |
| TCCCATCATAACCAGTTGCA+AGG | 0.534071 | 2.3:-45817404 | None:intergenic |
| AAGCCACATGGAACGTATCT+CGG | 0.538091 | 2.3:-45817856 | None:intergenic |
| ATTTGGGTTGGCATACTTGG+AGG | 0.538869 | 2.3:+45818036 | MS.gene062121:CDS |
| CCCTTGGTGCATGGAAATGT+TGG | 0.539920 | 2.3:-45813615 | None:intergenic |
| CCAAAATCTCAGCATGAGAA+GGG | 0.542021 | 2.3:-45812643 | None:intergenic |
| AATTGGTAAGTTGCCTTGAG+TGG | 0.544028 | 2.3:-45812408 | None:intergenic |
| ACTTCCTGGTCGTCCTGTGT+GGG | 0.544048 | 2.3:+45812802 | MS.gene062121:CDS |
| CACACAGGACGACCAGGAAG+TGG | 0.544605 | 2.3:-45812800 | None:intergenic |
| TCCTTGCAACTGGTTATGAT+GGG | 0.545738 | 2.3:+45817403 | MS.gene062121:CDS |
| AAGGCCATGTTTGGAATCGA+TGG | 0.546006 | 2.3:-45817795 | None:intergenic |
| TTACCATTGGAGATAATAGG+AGG | 0.558881 | 2.3:-45816224 | None:intergenic |
| CTAAGCTTCAGTCACAAACA+TGG | 0.565932 | 2.3:+45812570 | MS.gene062121:CDS |
| AACAAGCTACAGAAAGGCTC+AGG | 0.566868 | 2.3:-45817450 | None:intergenic |
| TCATAGAGTCCTACTTGCTG+TGG | 0.569108 | 2.3:+45817175 | MS.gene062121:CDS |
| GTTTGGAATCGATGGATGGA+CGG | 0.572935 | 2.3:-45817787 | None:intergenic |
| AGCTTGTTGGAATACCCTAC+TGG | 0.573175 | 2.3:+45817465 | MS.gene062121:CDS |
| TGTTAAGGGAAAGAAGGTTG+TGG | 0.573393 | 2.3:+45813713 | MS.gene062121:CDS |
| TATAGTGGCATGGTACCAGT+AGG | 0.579959 | 2.3:-45817480 | None:intergenic |
| CCATGTTTGGAATCGATGGA+TGG | 0.583448 | 2.3:-45817791 | None:intergenic |
| ATCAGCTATTGATCTAGCCA+TGG | 0.583633 | 2.3:+45813752 | MS.gene062121:CDS |
| AAATATGTGAAGATTTGGGT+TGG | 0.584905 | 2.3:+45818024 | MS.gene062121:CDS |
| ACTTGTTATGAAGGACCAGA+AGG | 0.585320 | 2.3:+45816051 | MS.gene062121:intron |
| TCAAAAGAGCATCAAAGTGG+TGG | 0.590237 | 2.3:+45817322 | MS.gene062121:CDS |
| ACTTCCACATTATAGGATGT+GGG | 0.591116 | 2.3:+45816113 | MS.gene062121:CDS |
| TTCACAAACAATTAAGGACA+TGG | 0.592895 | 2.3:+45817929 | MS.gene062121:CDS |
| TCTAGCCATGGAATGTGCAC+AGG | 0.594425 | 2.3:+45813764 | MS.gene062121:CDS |
| GTACCACTTCGAGTTTGTAG+TGG | 0.594431 | 2.3:+45813557 | MS.gene062121:CDS |
| TATTCCAACAAGCTACAGAA+AGG | 0.603701 | 2.3:-45817456 | None:intergenic |
| TGTTTACCTGTATAGTGGCA+TGG | 0.612113 | 2.3:-45817490 | None:intergenic |
| CGGAAGTTTCCACAGCAAGT+AGG | 0.614813 | 2.3:-45817184 | None:intergenic |
| AAGGGCCCTGAGGTGTTCAA+GGG | 0.617677 | 2.3:+45813633 | MS.gene062121:CDS |
| TACAGCCCTATGGCCACTCA+AGG | 0.619181 | 2.3:+45812395 | None:intergenic |
| ATGATATTAAACAGAGACGT+GGG | 0.621879 | 2.3:+45817142 | MS.gene062121:intron |
| CCTTACCCTTGAACACCTCA+GGG | 0.626128 | 2.3:-45813638 | None:intergenic |
| CTCCTTATGATCATTGTGCA+TGG | 0.626136 | 2.3:-45816078 | None:intergenic |
| CTCCACCAAACACCAAATCA+GGG | 0.629606 | 2.3:+45816180 | MS.gene062121:CDS |
| GCCAACATTTCCATGCACCA+AGG | 0.631300 | 2.3:+45813614 | MS.gene062121:CDS |
| TATGTTCAACACCAAAGTGG+TGG | 0.633153 | 2.3:+45812712 | MS.gene062121:CDS |
| TGGACAGAAAGCTCCCACAC+AGG | 0.633526 | 2.3:-45812815 | None:intergenic |
| ACTCCCCACATCCTATAATG+TGG | 0.633850 | 2.3:-45816117 | None:intergenic |
| CTTGTTATGAAGGACCAGAA+GGG | 0.637745 | 2.3:+45816052 | MS.gene062121:intron |
| AAACCACTACAAACTCGAAG+TGG | 0.640615 | 2.3:-45813560 | None:intergenic |
| ATAATAGGTGCTGGAGTGAG+TGG | 0.641778 | 2.3:+45812449 | MS.gene062121:CDS |
| TAATAGACCAGCAAGCCACA+TGG | 0.644884 | 2.3:-45817868 | None:intergenic |
| CCAACATTTCCATGCACCAA+GGG | 0.648361 | 2.3:+45813615 | MS.gene062121:CDS |
| CTTCCACATTATAGGATGTG+GGG | 0.652290 | 2.3:+45816114 | MS.gene062121:CDS |
| TCTTCAAAAGAGCATCAAAG+TGG | 0.668843 | 2.3:+45817319 | MS.gene062121:CDS |
| TCCATGCACCAAGGGCCCTG+AGG | 0.669783 | 2.3:+45813623 | MS.gene062121:CDS |
| GAATGTGCACAGGCAAACCA+AGG | 0.670081 | 2.3:+45813774 | MS.gene062121:CDS |
| ACTCTCAACATAACCCACAA+AGG | 0.682237 | 2.3:-45817814 | None:intergenic |
| TGTTATGTTCAACACCAAAG+TGG | 0.683704 | 2.3:+45812709 | MS.gene062121:CDS |
| GACCAGGAAGTGGATTTCCG+TGG | 0.691453 | 2.3:-45812790 | None:intergenic |
| GGACGTCTACCCAATGACCA+CGG | 0.697303 | 2.3:+45812773 | MS.gene062121:CDS |
| ATAGTGGCATGGTACCAGTA+GGG | 0.697965 | 2.3:-45817479 | None:intergenic |
| AATGATATTAAACAGAGACG+TGG | 0.716066 | 2.3:+45817141 | MS.gene062121:intron |
| CATCCGAGATACGTTCCATG+TGG | 0.741395 | 2.3:+45817853 | MS.gene062121:CDS |
| TGTTTGGTGGAGGAACTGTG+CGG | 0.784861 | 2.3:-45816169 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATATATTAATTAA+AGG | - | chr2.3:45814735-45814754 | None:intergenic | 0.0% |
| !!! | TTTAATTTTTTTTTTTTATA+CGG | - | chr2.3:45816784-45816803 | None:intergenic | 0.0% |
| !! | ATGACTATTATATAAATAAA+TGG | + | chr2.3:45814309-45814328 | MS.gene062121:intron | 10.0% |
| !! | CTAAAATTAGAATAATTATA+TGG | - | chr2.3:45814580-45814599 | None:intergenic | 10.0% |
| !! | GAATTTAAAAAATAATTCAA+TGG | - | chr2.3:45816267-45816286 | None:intergenic | 10.0% |
| !!! | AAAAATATCAAATTTTAACT+CGG | - | chr2.3:45813082-45813101 | None:intergenic | 10.0% |
| !!! | ACTAATTTTAAAAAATAAGA+AGG | + | chr2.3:45815292-45815311 | MS.gene062121:intron | 10.0% |
| !!! | ATATATTAAGTTACTTTTAT+AGG | + | chr2.3:45813201-45813220 | MS.gene062121:intron | 10.0% |
| !!! | TAAACAATTTCTTTTTATAA+GGG | + | chr2.3:45816991-45817010 | MS.gene062121:intron | 10.0% |
| !!! | TATATTAAGTTACTTTTATA+GGG | + | chr2.3:45813202-45813221 | MS.gene062121:intron | 10.0% |
| !! | AATAAGGAATCATAAAATAA+AGG | - | chr2.3:45815477-45815496 | None:intergenic | 15.0% |
| !! | ATCTTATCAATTAGAAATAA+TGG | - | chr2.3:45815790-45815809 | None:intergenic | 15.0% |
| !! | CAAATAAAGAAAAACATAAA+AGG | - | chr2.3:45815944-45815963 | None:intergenic | 15.0% |
| !! | GAGAAAGATAATATAAAATA+AGG | - | chr2.3:45815493-45815512 | None:intergenic | 15.0% |
| !! | TCTATAATTGAAAGATTATT+TGG | + | chr2.3:45816811-45816830 | MS.gene062121:intron | 15.0% |
| !! | TTAATTATTGTCTCTAAATA+TGG | + | chr2.3:45816669-45816688 | MS.gene062121:intron | 15.0% |
| !!! | AAAATATTTTTAGCTGAATA+TGG | - | chr2.3:45815392-45815411 | None:intergenic | 15.0% |
| !!! | AAAATGTACAATAATCTTTT+TGG | - | chr2.3:45814057-45814076 | None:intergenic | 15.0% |
| !!! | AAACAATTTCTTTTTATAAG+GGG | + | chr2.3:45816992-45817011 | MS.gene062121:intron | 15.0% |
| !!! | ATAGACTGTTAATTAATTTT+AGG | - | chr2.3:45817064-45817083 | None:intergenic | 15.0% |
| !!! | CTAAACAATTTCTTTTTATA+AGG | + | chr2.3:45816990-45817009 | MS.gene062121:intron | 15.0% |
| !!! | TAATTTTAAGTGTTTAATTG+TGG | - | chr2.3:45813009-45813028 | None:intergenic | 15.0% |
| !!! | TAGACTGTTAATTAATTTTA+GGG | - | chr2.3:45817063-45817082 | None:intergenic | 15.0% |
| !!! | TTGAATGATTTTTTTTTTTC+TGG | - | chr2.3:45815145-45815164 | None:intergenic | 15.0% |
| !!! | TTTAAAATGTCAAATGTTAT+TGG | + | chr2.3:45813107-45813126 | MS.gene062121:intron | 15.0% |
| !! | AAAATCATTCAAAAGAAAGA+TGG | + | chr2.3:45815153-45815172 | MS.gene062121:intron | 20.0% |
| !! | AAATCATTCAAAAGAAAGAT+GGG | + | chr2.3:45815154-45815173 | MS.gene062121:intron | 20.0% |
| !! | AACAAAAATTCAAATTTGTC+TGG | + | chr2.3:45813328-45813347 | MS.gene062121:intron | 20.0% |
| !! | AATAACTAAAATTTAGAGAC+TGG | + | chr2.3:45816318-45816337 | MS.gene062121:intron | 20.0% |
| !! | AATATATATGAGCTAAAACT+CGG | + | chr2.3:45814534-45814553 | MS.gene062121:intron | 20.0% |
| !! | AATTAACAAAAAAATCCACA+TGG | + | chr2.3:45814017-45814036 | MS.gene062121:intron | 20.0% |
| !! | AGATCATATTTATTTACCAT+TGG | - | chr2.3:45816240-45816259 | None:intergenic | 20.0% |
| !! | ATATAAATAAATGGATCGTT+TGG | + | chr2.3:45814318-45814337 | MS.gene062121:intron | 20.0% |
| !! | ATCAAGTTTACAATAATCAA+TGG | - | chr2.3:45813673-45813692 | None:intergenic | 20.0% |
| !! | CTTATCAAAAAAAATGTTGA+TGG | + | chr2.3:45816646-45816665 | MS.gene062121:intron | 20.0% |
| !! | GCATCAAATTTCAAAATTTA+AGG | + | chr2.3:45816846-45816865 | MS.gene062121:intron | 20.0% |
| !! | GTTAATATATGTTTATTCCT+CGG | - | chr2.3:45817041-45817060 | None:intergenic | 20.0% |
| !! | TAAAAAATCAAACGATTTCT+TGG | - | chr2.3:45814264-45814283 | None:intergenic | 20.0% |
| !! | TAACATAGTATAGAGAAAAT+TGG | + | chr2.3:45816391-45816410 | MS.gene062121:intron | 20.0% |
| !! | TAATCTTTCAATTATAGAGA+TGG | - | chr2.3:45816809-45816828 | None:intergenic | 20.0% |
| !! | TAGAAATATTAGTTATATCG+AGG | - | chr2.3:45814856-45814875 | None:intergenic | 20.0% |
| !! | TGAATATCTCATATATATCA+AGG | + | chr2.3:45813408-45813427 | MS.gene062121:intron | 20.0% |
| !! | TTAAAAAACGCAAAAGTTTA+TGG | - | chr2.3:45815999-45816018 | None:intergenic | 20.0% |
| !!! | AAATTAAAGTATTTGACCAA+TGG | - | chr2.3:45816620-45816639 | None:intergenic | 20.0% |
| !!! | AGATAAAATCATCTTATTTG+AGG | - | chr2.3:45813382-45813401 | None:intergenic | 20.0% |
| !!! | ATTGAAAGATTATTTGGTTT+TGG | + | chr2.3:45816817-45816836 | MS.gene062121:intron | 20.0% |
| !!! | ATTTTGATGTATTTTTTGTC+AGG | + | chr2.3:45817760-45817779 | MS.gene062121:intron | 20.0% |
| !!! | GATAAAATCATCTTATTTGA+GGG | - | chr2.3:45813381-45813400 | None:intergenic | 20.0% |
| !!! | TTTTAAATTCATGTGTTTAG+TGG | + | chr2.3:45816277-45816296 | MS.gene062121:intron | 20.0% |
| !!! | TTTTCATTGGTTAAAAACAA+TGG | + | chr2.3:45815588-45815607 | MS.gene062121:intron | 20.0% |
| !!! | TTTTGATGTATTTTTTGTCA+GGG | + | chr2.3:45817761-45817780 | MS.gene062121:intron | 20.0% |
| ! | AAACAATGAAAAAGTCTACA+AGG | + | chr2.3:45817952-45817971 | MS.gene062121:CDS | 25.0% |
| ! | AATGCTTTCACAAACAATTA+AGG | + | chr2.3:45817923-45817942 | MS.gene062121:CDS | 25.0% |
| ! | AGATTAAGAACTAGAAAGAA+AGG | + | chr2.3:45814469-45814488 | MS.gene062121:intron | 25.0% |
| ! | AGGGACAAAAAAAAATTATG+AGG | + | chr2.3:45813221-45813240 | MS.gene062121:intron | 25.0% |
| ! | ATATGTTATATATGCACTCA+GGG | - | chr2.3:45814821-45814840 | None:intergenic | 25.0% |
| ! | CTGAATAAATGAAAAATTCG+AGG | - | chr2.3:45815253-45815272 | None:intergenic | 25.0% |
| ! | GATGAAATATGTGAAGATTT+GGG | + | chr2.3:45818020-45818039 | MS.gene062121:CDS | 25.0% |
| ! | TAAACTCGGGTAAAATAATA+TGG | + | chr2.3:45814499-45814518 | MS.gene062121:intron | 25.0% |
| ! | TATTTACCATTGGAGATAAT+AGG | - | chr2.3:45816230-45816249 | None:intergenic | 25.0% |
| ! | TGATGAAATATGTGAAGATT+TGG | + | chr2.3:45818019-45818038 | MS.gene062121:CDS | 25.0% |
| ! | TTTAAACCATTCTTCTTATG+TGG | - | chr2.3:45814969-45814988 | None:intergenic | 25.0% |
| ! | TTTCCACCATAAATTAAACT+CGG | - | chr2.3:45814997-45815016 | None:intergenic | 25.0% |
| !! | ACGAAATTTTACTTACCTAA+CGG | + | chr2.3:45815026-45815045 | MS.gene062121:intron | 25.0% |
| !! | ATACTTGCTAACAAAGTTAT+AGG | - | chr2.3:45814684-45814703 | None:intergenic | 25.0% |
| !! | ATGAATTTAGTGATTTTCCA+TGG | + | chr2.3:45812597-45812616 | MS.gene062121:CDS | 25.0% |
| !! | CTCGAATTTTTCATTTATTC+AGG | + | chr2.3:45815251-45815270 | MS.gene062121:intron | 25.0% |
| !! | TACTTGCTAACAAAGTTATA+GGG | - | chr2.3:45814683-45814702 | None:intergenic | 25.0% |
| !! | TTGTTAGCAAGTATTTTACA+TGG | + | chr2.3:45814690-45814709 | MS.gene062121:intron | 25.0% |
| !!! | AATTTTGAAATTTGATGCCA+AGG | - | chr2.3:45816844-45816863 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAATTGACCATTT+CGG | + | chr2.3:45816451-45816470 | MS.gene062121:intron | 25.0% |
| !!! | ATAATATTCTAAAGCGAACA+CGG | + | chr2.3:45817551-45817570 | MS.gene062121:intron | 25.0% |
| !!! | ATTTTTAGCTGAATATGGTA+CGG | - | chr2.3:45815387-45815406 | None:intergenic | 25.0% |
| !!! | TCTTTTCTCTCTTTTTTCAT+TGG | + | chr2.3:45815575-45815594 | MS.gene062121:intron | 25.0% |
| !!! | TTTGATGTATTTTTTGTCAG+GGG | + | chr2.3:45817762-45817781 | MS.gene062121:intron | 25.0% |
| !!! | TTTTGTTGGTGTTATTCTTA+TGG | - | chr2.3:45815081-45815100 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTGGCTTAACTT+AGG | - | chr2.3:45815134-45815153 | None:intergenic | 25.0% |
| AAAAACCGCTAATATTAGAG+GGG | - | chr2.3:45816753-45816772 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr2.3:45815601-45815620 | MS.gene062121:intron | 30.0% | |
| AAAATCAAACGATTTCTTGG+AGG | - | chr2.3:45814261-45814280 | None:intergenic | 30.0% | |
| AAATATGTGAAGATTTGGGT+TGG | + | chr2.3:45818024-45818043 | MS.gene062121:CDS | 30.0% | |
| AAATCAACTACATCCACAAT+TGG | - | chr2.3:45814606-45814625 | None:intergenic | 30.0% | |
| AATACCTAATACCACCTAAA+AGG | - | chr2.3:45815747-45815766 | None:intergenic | 30.0% | |
| AATCAACTACATCCACAATT+GGG | - | chr2.3:45814605-45814624 | None:intergenic | 30.0% | |
| AATCATAATGCATACAAGTC+TGG | + | chr2.3:45813940-45813959 | MS.gene062121:intron | 30.0% | |
| AATGAAAAATTCGAGGTTTG+CGG | - | chr2.3:45815246-45815265 | None:intergenic | 30.0% | |
| AATGATATTAAACAGAGACG+TGG | + | chr2.3:45817141-45817160 | MS.gene062121:intron | 30.0% | |
| AATTCAAATTTGTCTGGTAG+TGG | + | chr2.3:45813334-45813353 | MS.gene062121:intron | 30.0% | |
| AATTGTGTTTACCTGTATAG+TGG | - | chr2.3:45817498-45817517 | None:intergenic | 30.0% | |
| AGAAAGGATACACATAAACT+CGG | + | chr2.3:45814485-45814504 | MS.gene062121:intron | 30.0% | |
| AGACATGCATGTGTAAAAAT+TGG | + | chr2.3:45813156-45813175 | MS.gene062121:intron | 30.0% | |
| ATGATATTAAACAGAGACGT+GGG | + | chr2.3:45817142-45817161 | MS.gene062121:intron | 30.0% | |
| ATGCAAAATCTTCCTCAAAT+GGG | - | chr2.3:45817239-45817258 | None:intergenic | 30.0% | |
| ATTCTCAACTATGCTTAGAA+AGG | - | chr2.3:45817730-45817749 | None:intergenic | 30.0% | |
| ATTGGTTGTAGGAATATCTT+TGG | + | chr2.3:45816587-45816606 | MS.gene062121:intron | 30.0% | |
| ATTTAGATATTGCGATTGTG+TGG | + | chr2.3:45815885-45815904 | MS.gene062121:intron | 30.0% | |
| CAAAAACCGCTAATATTAGA+GGG | - | chr2.3:45816754-45816773 | None:intergenic | 30.0% | |
| CAAGTATAACTTACTTAGCA+AGG | + | chr2.3:45815189-45815208 | MS.gene062121:intron | 30.0% | |
| CAGAATCATGAGGTATAATA+TGG | - | chr2.3:45816344-45816363 | None:intergenic | 30.0% | |
| CATTGACAACATCAAAATAG+TGG | + | chr2.3:45813051-45813070 | MS.gene062121:intron | 30.0% | |
| CCAATTCTAGACACTATAAT+TGG | - | chr2.3:45812428-45812447 | None:intergenic | 30.0% | |
| CCTGTAATTTGAGCAAATTT+CGG | + | chr2.3:45816880-45816899 | MS.gene062121:intron | 30.0% | |
| GATATGTTATATATGCACTC+AGG | - | chr2.3:45814822-45814841 | None:intergenic | 30.0% | |
| GTCAAAAAGTTGTCATAAAG+TGG | + | chr2.3:45815668-45815687 | MS.gene062121:intron | 30.0% | |
| GTTGCATAGAACATGAAAAA+TGG | - | chr2.3:45816144-45816163 | None:intergenic | 30.0% | |
| TAGTGGCTTCAAAAACAATA+GGG | - | chr2.3:45812508-45812527 | None:intergenic | 30.0% | |
| TAGTGTTAACGAAATTGAGA+TGG | + | chr2.3:45814437-45814456 | MS.gene062121:intron | 30.0% | |
| TATGTTATATATGCACTCAG+GGG | - | chr2.3:45814820-45814839 | None:intergenic | 30.0% | |
| TCAAAAACCGCTAATATTAG+AGG | - | chr2.3:45816755-45816774 | None:intergenic | 30.0% | |
| TTAGTGGCTTCAAAAACAAT+AGG | - | chr2.3:45812509-45812528 | None:intergenic | 30.0% | |
| TTCAATCCATACTTCTCAAA+CGG | - | chr2.3:45817207-45817226 | None:intergenic | 30.0% | |
| TTCACAAACAATTAAGGACA+TGG | + | chr2.3:45817929-45817948 | MS.gene062121:CDS | 30.0% | |
| TTCCACCATAAATTAAACTC+GGG | - | chr2.3:45814996-45815015 | None:intergenic | 30.0% | |
| TTCTGTCCAAACTAATGAAT+CGG | + | chr2.3:45812829-45812848 | MS.gene062121:CDS | 30.0% | |
| ! | AAAATCATCTTATTTGAGGG+TGG | - | chr2.3:45813378-45813397 | None:intergenic | 30.0% |
| ! | AACAACCCGAGTTTAATTTA+TGG | + | chr2.3:45814988-45815007 | MS.gene062121:intron | 30.0% |
| ! | AACAAGTTCTAGTAGTAAGT+AGG | - | chr2.3:45815109-45815128 | None:intergenic | 30.0% |
| ! | AATCCTAGTTTAGAGTCATT+TGG | - | chr2.3:45814130-45814149 | None:intergenic | 30.0% |
| ! | AATTTTTGTTCACTACGTTG+TGG | - | chr2.3:45813318-45813337 | None:intergenic | 30.0% |
| ! | ACTTGCTAACAAAGTTATAG+GGG | - | chr2.3:45814682-45814701 | None:intergenic | 30.0% |
| ! | AGTCTACAAGGTTTTACAAA+AGG | + | chr2.3:45817964-45817983 | MS.gene062121:CDS | 30.0% |
| ! | ATTTTTGTTCACTACGTTGT+GGG | - | chr2.3:45813317-45813336 | None:intergenic | 30.0% |
| ! | CCAATTATAGTGTCTAGAAT+TGG | + | chr2.3:45812425-45812444 | MS.gene062121:CDS | 30.0% |
| ! | GTAAGTAGGTAAACTTTTGT+TGG | - | chr2.3:45815095-45815114 | None:intergenic | 30.0% |
| ! | GTTCATTTCTTTTATCCATG+TGG | - | chr2.3:45814035-45814054 | None:intergenic | 30.0% |
| ! | TAAAGTATTTGACCAATGGT+AGG | - | chr2.3:45816616-45816635 | None:intergenic | 30.0% |
| ! | TAATCAGTACTCTCTCTTTT+AGG | - | chr2.3:45812623-45812642 | None:intergenic | 30.0% |
| ! | TTAGGTGGTATTAGGTATTT+TGG | + | chr2.3:45815748-45815767 | MS.gene062121:intron | 30.0% |
| ! | TTGTTACTTAACCAAGTGAT+TGG | + | chr2.3:45814923-45814942 | MS.gene062121:intron | 30.0% |
| ! | TTTGAAGCCACTAATTCAAT+TGG | + | chr2.3:45812515-45812534 | MS.gene062121:CDS | 30.0% |
| ! | TTTTCTTCTCTTTTCTCATG+AGG | - | chr2.3:45816488-45816507 | None:intergenic | 30.0% |
| !! | ACGTAACTTGTTCTAAATTG+CGG | + | chr2.3:45813849-45813868 | MS.gene062121:intron | 30.0% |
| !! | ACTCGAAGATTCTTTGATTT+TGG | - | chr2.3:45816956-45816975 | None:intergenic | 30.0% |
| !! | CTTTTAAGTAAACCCTGATT+TGG | - | chr2.3:45816195-45816214 | None:intergenic | 30.0% |
| !! | GGTGTTATTCTTATGGAAAA+AGG | - | chr2.3:45815074-45815093 | None:intergenic | 30.0% |
| !! | GTGTTCGCTTTAGAATATTA+TGG | - | chr2.3:45817552-45817571 | None:intergenic | 30.0% |
| !! | TTGCTTCAAACTTGTTATGA+AGG | + | chr2.3:45816042-45816061 | MS.gene062121:intron | 30.0% |
| !! | TTTTTCAATGAGGCTGATAA+GGG | + | chr2.3:45817288-45817307 | MS.gene062121:CDS | 30.0% |
| !!! | GACAAAGAAGGTTTTGATTT+CGG | + | chr2.3:45812752-45812771 | MS.gene062121:CDS | 30.0% |
| !!! | TTTTTTCAATGAGGCTGATA+AGG | + | chr2.3:45817287-45817306 | MS.gene062121:CDS | 30.0% |
| AAACTTCATTTCCACCACTT+TGG | - | chr2.3:45812726-45812745 | None:intergenic | 35.0% | |
| AAACTTCCGTTTGAGAAGTA+TGG | + | chr2.3:45817198-45817217 | MS.gene062121:CDS | 35.0% | |
| AAAGGAAGAGGAAGAATAAG+AGG | + | chr2.3:45815619-45815638 | MS.gene062121:intron | 35.0% | |
| AACACCACCAATTGAATTAG+TGG | - | chr2.3:45812525-45812544 | None:intergenic | 35.0% | |
| AACCATGCACAATGATCATA+AGG | + | chr2.3:45816076-45816095 | MS.gene062121:CDS | 35.0% | |
| AAGAGGATAATGTGAGTATG+AGG | + | chr2.3:45815636-45815655 | MS.gene062121:intron | 35.0% | |
| ACGAGACATCCAAATTCAAA+GGG | - | chr2.3:45813966-45813985 | None:intergenic | 35.0% | |
| ACTGTGCAAAATCGATGATA+TGG | - | chr2.3:45816917-45816936 | None:intergenic | 35.0% | |
| ACTTCCACATTATAGGATGT+GGG | + | chr2.3:45816113-45816132 | MS.gene062121:CDS | 35.0% | |
| AGAGGATAATGTGAGTATGA+GGG | + | chr2.3:45815637-45815656 | MS.gene062121:intron | 35.0% | |
| ATATACGACACTGACACTTA+TGG | + | chr2.3:45814379-45814398 | MS.gene062121:intron | 35.0% | |
| ATATTACACAATAGCACGCA+TGG | + | chr2.3:45814204-45814223 | MS.gene062121:intron | 35.0% | |
| ATCTGACTATCTGATCTCAA+TGG | + | chr2.3:45817635-45817654 | MS.gene062121:intron | 35.0% | |
| ATTGGACACTTCCACATTAT+AGG | + | chr2.3:45816106-45816125 | MS.gene062121:CDS | 35.0% | |
| CAAGGTCACTACGATATTAT+GGG | + | chr2.3:45815207-45815226 | MS.gene062121:intron | 35.0% | |
| CTAAGAGCAAATTGTTACCT+TGG | - | chr2.3:45813794-45813813 | None:intergenic | 35.0% | |
| GAAAGGATACACATAAACTC+GGG | + | chr2.3:45814486-45814505 | MS.gene062121:intron | 35.0% | |
| GAACCAAATGACTCTAAACT+AGG | + | chr2.3:45814124-45814143 | MS.gene062121:intron | 35.0% | |
| GATGCAAAATCTTCCTCAAA+TGG | - | chr2.3:45817240-45817259 | None:intergenic | 35.0% | |
| GTCACAAAAGTTGTCTCAAA+TGG | - | chr2.3:45815551-45815570 | None:intergenic | 35.0% | |
| GTCCATTTCTTATCCTTCTA+CGG | - | chr2.3:45813249-45813268 | None:intergenic | 35.0% | |
| GTTTACCCCTCTAATATTAG+CGG | + | chr2.3:45816745-45816764 | MS.gene062121:intron | 35.0% | |
| TACAAGCAATCATGTCATCA+GGG | + | chr2.3:45817593-45817612 | MS.gene062121:intron | 35.0% | |
| TACGAGACATCCAAATTCAA+AGG | - | chr2.3:45813967-45813986 | None:intergenic | 35.0% | |
| TATTCCAACAAGCTACAGAA+AGG | - | chr2.3:45817459-45817478 | None:intergenic | 35.0% | |
| TGAACTCCACATAAGAAGAA+TGG | + | chr2.3:45814960-45814979 | MS.gene062121:intron | 35.0% | |
| TGATCATAAGGAGTTTGCAT+TGG | + | chr2.3:45816088-45816107 | MS.gene062121:CDS | 35.0% | |
| TGCACAGTCAAAATTCATGA+AGG | + | chr2.3:45816929-45816948 | MS.gene062121:intron | 35.0% | |
| TGCTTGTAGATAATGACAAC+AGG | - | chr2.3:45817581-45817600 | None:intergenic | 35.0% | |
| TGTTATGTTCAACACCAAAG+TGG | + | chr2.3:45812709-45812728 | MS.gene062121:CDS | 35.0% | |
| TGTTTATTCCTCGGTATAGT+TGG | - | chr2.3:45817032-45817051 | None:intergenic | 35.0% | |
| TTAACGAAATTGAGATGGAG+AGG | + | chr2.3:45814442-45814461 | MS.gene062121:intron | 35.0% | |
| TTACCATTGGAGATAATAGG+AGG | - | chr2.3:45816227-45816246 | None:intergenic | 35.0% | |
| TTGTCTACTTGATGTTTCAG+CGG | + | chr2.3:45813535-45813554 | MS.gene062121:intron | 35.0% | |
| TTGTGAATGACAGAATCATG+AGG | - | chr2.3:45816354-45816373 | None:intergenic | 35.0% | |
| TTTGAGTGCCCCTAAAAATA+TGG | + | chr2.3:45814754-45814773 | MS.gene062121:intron | 35.0% | |
| TTTGGAGACATTGTTCCTAT+AGG | + | chr2.3:45812543-45812562 | MS.gene062121:CDS | 35.0% | |
| ! | AACCCGAGTTTAATTTATGG+TGG | + | chr2.3:45814991-45815010 | MS.gene062121:intron | 35.0% |
| ! | CCGAAATTTGCTCAAATTAC+AGG | - | chr2.3:45816883-45816902 | None:intergenic | 35.0% |
| ! | GTGTCTAGAATTGGCATAAT+AGG | + | chr2.3:45812434-45812453 | MS.gene062121:CDS | 35.0% |
| ! | TGGTGGAAATGAAGTTTGTT+CGG | + | chr2.3:45812729-45812748 | MS.gene062121:CDS | 35.0% |
| !! | CTAATTCAATTGGTGGTGTT+TGG | + | chr2.3:45812525-45812544 | MS.gene062121:CDS | 35.0% |
| !! | GAATGGCTTTACTGTTTTGA+TGG | + | chr2.3:45815446-45815465 | MS.gene062121:intron | 35.0% |
| !! | GTGTGATAGTTGTTTTGCTA+CGG | - | chr2.3:45812480-45812499 | None:intergenic | 35.0% |
| !! | TCTTCAAAAGAGCATCAAAG+TGG | + | chr2.3:45817319-45817338 | MS.gene062121:CDS | 35.0% |
| !!! | AAGTGGTGGTTTTGTAATGA+AGG | + | chr2.3:45817336-45817355 | MS.gene062121:CDS | 35.0% |
| !!! | ACCAGAGAGTTTTTTCAATG+AGG | + | chr2.3:45817278-45817297 | MS.gene062121:CDS | 35.0% |
| !!! | CTAATTTTAGAGCCCAATTG+TGG | + | chr2.3:45814590-45814609 | MS.gene062121:intron | 35.0% |
| !!! | GAAAGCATTTTCTCAGCATT+TGG | - | chr2.3:45817912-45817931 | None:intergenic | 35.0% |
| !!! | GATTATTTGGTTTTGGACCT+TGG | + | chr2.3:45816824-45816843 | MS.gene062121:intron | 35.0% |
| AAACCACTACAAACTCGAAG+TGG | - | chr2.3:45813563-45813582 | None:intergenic | 40.0% | |
| AATTGGTAAGTTGCCTTGAG+TGG | - | chr2.3:45812411-45812430 | None:intergenic | 40.0% | |
| ACAACCAATCCCATTTGTGT+CGG | - | chr2.3:45816576-45816595 | None:intergenic | 40.0% | |
| ACTCTCAACATAACCCACAA+AGG | - | chr2.3:45817817-45817836 | None:intergenic | 40.0% | |
| AGAATTGGCATAATAGGTGC+TGG | + | chr2.3:45812440-45812459 | MS.gene062121:CDS | 40.0% | |
| AGCTACTAGTGACCTTGTTA+AGG | + | chr2.3:45813698-45813717 | MS.gene062121:CDS | 40.0% | |
| AGGAACTGCATCACAACATT+TGG | + | chr2.3:45817984-45818003 | MS.gene062121:CDS | 40.0% | |
| ATATACCCAACCGACACAAA+TGG | + | chr2.3:45816563-45816582 | MS.gene062121:intron | 40.0% | |
| ATCAAACGATTTCTTGGAGG+AGG | - | chr2.3:45814258-45814277 | None:intergenic | 40.0% | |
| ATCACGTAAGTCCAATCACT+TGG | - | chr2.3:45814937-45814956 | None:intergenic | 40.0% | |
| ATCAGCTATTGATCTAGCCA+TGG | + | chr2.3:45813752-45813771 | MS.gene062121:CDS | 40.0% | |
| ATGCCTCCTATTATCTCCAA+TGG | + | chr2.3:45816221-45816240 | MS.gene062121:CDS | 40.0% | |
| ATGGAGAGAGAAAAAGGAAG+AGG | + | chr2.3:45815607-45815626 | MS.gene062121:intron | 40.0% | |
| ATTCCAAACATGGCCTTTGT+GGG | + | chr2.3:45817801-45817820 | MS.gene062121:CDS | 40.0% | |
| CAAAATCGATGATATGGCAG+GGG | - | chr2.3:45816911-45816930 | None:intergenic | 40.0% | |
| CAACCTTCTTTCCCTTAACA+AGG | - | chr2.3:45813713-45813732 | None:intergenic | 40.0% | |
| CACTTCCACATTATAGGATG+TGG | + | chr2.3:45816112-45816131 | MS.gene062121:CDS | 40.0% | |
| CATGGAAATGTTGGCATCAA+TGG | - | chr2.3:45813609-45813628 | None:intergenic | 40.0% | |
| CCAAAATCTCAGCATGAGAA+GGG | - | chr2.3:45812646-45812665 | None:intergenic | 40.0% | |
| CCCTAAAAATATGGTGCACT+GGG | + | chr2.3:45814763-45814782 | MS.gene062121:intron | 40.0% | |
| CTAAGCTTCAGTCACAAACA+TGG | + | chr2.3:45812570-45812589 | MS.gene062121:CDS | 40.0% | |
| CTACAAGCAATCATGTCATC+AGG | + | chr2.3:45817592-45817611 | MS.gene062121:intron | 40.0% | |
| CTCCTTATGATCATTGTGCA+TGG | - | chr2.3:45816081-45816100 | None:intergenic | 40.0% | |
| CTGAAGCTTAGTACACCTAT+AGG | - | chr2.3:45812561-45812580 | None:intergenic | 40.0% | |
| CTTCCACATTATAGGATGTG+GGG | + | chr2.3:45816114-45816133 | MS.gene062121:CDS | 40.0% | |
| GAAAATCGAGTCTGACAGAA+TGG | + | chr2.3:45813283-45813302 | MS.gene062121:intron | 40.0% | |
| GAAGCCACTAATTCAATTGG+TGG | + | chr2.3:45812518-45812537 | MS.gene062121:CDS | 40.0% | |
| GCAAAATCGATGATATGGCA+GGG | - | chr2.3:45816912-45816931 | None:intergenic | 40.0% | |
| GCAAGGTCACTACGATATTA+TGG | + | chr2.3:45815206-45815225 | MS.gene062121:intron | 40.0% | |
| GCCTCATTGAAAAAACTCTC+TGG | - | chr2.3:45817282-45817301 | None:intergenic | 40.0% | |
| GCTACTAGTGACCTTGTTAA+GGG | + | chr2.3:45813699-45813718 | MS.gene062121:CDS | 40.0% | |
| GTCACTACGATATTATGGGA+CGG | + | chr2.3:45815211-45815230 | MS.gene062121:intron | 40.0% | |
| GTGCAAAAAGAATACGAGTG+TGG | + | chr2.3:45814088-45814107 | MS.gene062121:intron | 40.0% | |
| GTTTAATTGTGGTCACGTCA+AGG | - | chr2.3:45812998-45813017 | None:intergenic | 40.0% | |
| TAAGCTGAAGTTTGACCGTT+AGG | - | chr2.3:45815044-45815063 | None:intergenic | 40.0% | |
| TAATGAATCGGACGCAATTC+AGG | + | chr2.3:45812841-45812860 | MS.gene062121:CDS | 40.0% | |
| TATACCCAACCGACACAAAT+GGG | + | chr2.3:45816564-45816583 | MS.gene062121:intron | 40.0% | |
| TATCTTTGGATGCCTACCAT+TGG | + | chr2.3:45816601-45816620 | MS.gene062121:intron | 40.0% | |
| TATGTTCAACACCAAAGTGG+TGG | + | chr2.3:45812712-45812731 | MS.gene062121:CDS | 40.0% | |
| TCCAAAATCTCAGCATGAGA+AGG | - | chr2.3:45812647-45812666 | None:intergenic | 40.0% | |
| TCCTTGCAACTGGTTATGAT+GGG | + | chr2.3:45817403-45817422 | MS.gene062121:CDS | 40.0% | |
| TGACCTTGTTAAGGGAAAGA+AGG | + | chr2.3:45813707-45813726 | MS.gene062121:CDS | 40.0% | |
| TGCAAAATCGATGATATGGC+AGG | - | chr2.3:45816913-45816932 | None:intergenic | 40.0% | |
| TGCCGTAGAAGGATAAGAAA+TGG | + | chr2.3:45813244-45813263 | MS.gene062121:intron | 40.0% | |
| TGTTAAGGGAAAGAAGGTTG+TGG | + | chr2.3:45813713-45813732 | MS.gene062121:CDS | 40.0% | |
| TGTTTACCTGTATAGTGGCA+TGG | - | chr2.3:45817493-45817512 | None:intergenic | 40.0% | |
| TTATAGTCACCAGCAGTGTA+AGG | - | chr2.3:45818092-45818111 | None:intergenic | 40.0% | |
| TTATTCCTCGGTATAGTTGG+TGG | - | chr2.3:45817029-45817048 | None:intergenic | 40.0% | |
| TTGCGTCCGATTCATTAGTT+TGG | - | chr2.3:45812838-45812857 | None:intergenic | 40.0% | |
| TTGCTCCCTTGATCAACTAT+GGG | - | chr2.3:45815426-45815445 | None:intergenic | 40.0% | |
| TTGGGTATATGTCCTCATGT+CGG | - | chr2.3:45816553-45816572 | None:intergenic | 40.0% | |
| ! | AAGTTTGTTCGGGACAAAGA+AGG | + | chr2.3:45812740-45812759 | MS.gene062121:CDS | 40.0% |
| ! | ACTATAGCTGCATGCCTTTT+AGG | + | chr2.3:45815730-45815749 | MS.gene062121:intron | 40.0% |
| ! | CTTGTTATGAAGGACCAGAA+GGG | + | chr2.3:45816052-45816071 | MS.gene062121:intron | 40.0% |
| ! | GACACTGACACTTATGGTTT+TGG | + | chr2.3:45814385-45814404 | MS.gene062121:intron | 40.0% |
| ! | GGTGGAAATGAAGTTTGTTC+GGG | + | chr2.3:45812730-45812749 | MS.gene062121:CDS | 40.0% |
| ! | GTGGTTTGCACTGGAAAATA+TGG | + | chr2.3:45813576-45813595 | MS.gene062121:CDS | 40.0% |
| !! | AAATTATGAGGTGCCGTAGA+AGG | + | chr2.3:45813233-45813252 | MS.gene062121:intron | 40.0% |
| !! | AAGATTTGGGTTGGCATACT+TGG | + | chr2.3:45818033-45818052 | MS.gene062121:CDS | 40.0% |
| !! | ACACAAATGGGATTGGTTGT+AGG | + | chr2.3:45816576-45816595 | MS.gene062121:intron | 40.0% |
| !! | ACTTGTTATGAAGGACCAGA+AGG | + | chr2.3:45816051-45816070 | MS.gene062121:intron | 40.0% |
| !! | CATGCCTTTTAGGTGGTATT+AGG | + | chr2.3:45815740-45815759 | MS.gene062121:intron | 40.0% |
| !! | CCCAGTGCACCATATTTTTA+GGG | - | chr2.3:45814766-45814785 | None:intergenic | 40.0% |
| !! | GTAAACCCTGATTTGGTGTT+TGG | - | chr2.3:45816188-45816207 | None:intergenic | 40.0% |
| !! | TCAAAAGAGCATCAAAGTGG+TGG | + | chr2.3:45817322-45817341 | MS.gene062121:CDS | 40.0% |
| !!! | CCAGTGCACCATATTTTTAG+GGG | - | chr2.3:45814765-45814784 | None:intergenic | 40.0% |
| AAACGATTTCTTGGAGGAGG+AGG | - | chr2.3:45814255-45814274 | None:intergenic | 45.0% | |
| AACAAGCTACAGAAAGGCTC+AGG | - | chr2.3:45817453-45817472 | None:intergenic | 45.0% | |
| AAGCCACATGGAACGTATCT+CGG | - | chr2.3:45817859-45817878 | None:intergenic | 45.0% | |
| ACTATGCTTAGAAAGGAGCG+CGG | - | chr2.3:45817723-45817742 | None:intergenic | 45.0% | |
| ACTCCCCACATCCTATAATG+TGG | - | chr2.3:45816120-45816139 | None:intergenic | 45.0% | |
| AGAAACCACCAACTATACCG+AGG | + | chr2.3:45817021-45817040 | MS.gene062121:intron | 45.0% | |
| ATAGTGGCATGGTACCAGTA+GGG | - | chr2.3:45817482-45817501 | None:intergenic | 45.0% | |
| CAAGTCTGGCCCTTTGAATT+TGG | + | chr2.3:45813954-45813973 | MS.gene062121:intron | 45.0% | |
| CACCACCCATAGTTGATCAA+GGG | + | chr2.3:45815418-45815437 | MS.gene062121:intron | 45.0% | |
| CCAACATTTCCATGCACCAA+GGG | + | chr2.3:45813615-45813634 | MS.gene062121:CDS | 45.0% | |
| CCCCTAAAAATATGGTGCAC+TGG | + | chr2.3:45814762-45814781 | MS.gene062121:intron | 45.0% | |
| CTCCACCAAACACCAAATCA+GGG | + | chr2.3:45816180-45816199 | MS.gene062121:CDS | 45.0% | |
| CTCCTTGCAACTGGTTATGA+TGG | + | chr2.3:45817402-45817421 | MS.gene062121:CDS | 45.0% | |
| CTTGCTCCCTTGATCAACTA+TGG | - | chr2.3:45815427-45815446 | None:intergenic | 45.0% | |
| GAAACCAGAACACCCATTTG+AGG | + | chr2.3:45817224-45817243 | MS.gene062121:CDS | 45.0% | |
| GATCTCCTTCGCTACATGAT+TGG | + | chr2.3:45817666-45817685 | MS.gene062121:intron | 45.0% | |
| GATGTTGTTCTCCTTGCAAC+TGG | + | chr2.3:45817393-45817412 | MS.gene062121:CDS | 45.0% | |
| GATTCCAAACATGGCCTTTG+TGG | + | chr2.3:45817800-45817819 | MS.gene062121:CDS | 45.0% | |
| GCATTTACTCCTTACACTGC+TGG | + | chr2.3:45818080-45818099 | MS.gene062121:CDS | 45.0% | |
| GGAAAGAAGGTTGTGGTTGT+GGG | + | chr2.3:45813720-45813739 | MS.gene062121:CDS | 45.0% | |
| GTATATGTCCTCATGTCGGT+AGG | - | chr2.3:45816549-45816568 | None:intergenic | 45.0% | |
| GTTGATCAAGGGAGCAAGAA+TGG | + | chr2.3:45815429-45815448 | MS.gene062121:intron | 45.0% | |
| TAACCCACAAAGGCCATGTT+TGG | - | chr2.3:45817807-45817826 | None:intergenic | 45.0% | |
| TAATAGACCAGCAAGCCACA+TGG | - | chr2.3:45817871-45817890 | None:intergenic | 45.0% | |
| TAGCTGAATATGGTACGGCT+CGG | - | chr2.3:45815382-45815401 | None:intergenic | 45.0% | |
| TATAGTGGCATGGTACCAGT+AGG | - | chr2.3:45817483-45817502 | None:intergenic | 45.0% | |
| TCACCACCCATAGTTGATCA+AGG | + | chr2.3:45815417-45815436 | MS.gene062121:intron | 45.0% | |
| TCCCATCATAACCAGTTGCA+AGG | - | chr2.3:45817407-45817426 | None:intergenic | 45.0% | |
| TCTTCCTCAAATGGGTGTTC+TGG | - | chr2.3:45817231-45817250 | None:intergenic | 45.0% | |
| TGCAACCAATCATGTAGCGA+AGG | - | chr2.3:45817674-45817693 | None:intergenic | 45.0% | |
| ! | AAGGCCATGTTTGGAATCGA+TGG | - | chr2.3:45817798-45817817 | None:intergenic | 45.0% |
| ! | AAGTGGATTTCCGTGGTCAT+TGG | - | chr2.3:45812786-45812805 | None:intergenic | 45.0% |
| ! | AGTGGATTTCCGTGGTCATT+GGG | - | chr2.3:45812785-45812804 | None:intergenic | 45.0% |
| ! | ATAGCTGCATGCCTTTTAGG+TGG | + | chr2.3:45815733-45815752 | MS.gene062121:intron | 45.0% |
| ! | CCATGTTTGGAATCGATGGA+TGG | - | chr2.3:45817794-45817813 | None:intergenic | 45.0% |
| ! | CCCTTCTCATGCTGAGATTT+TGG | + | chr2.3:45812643-45812662 | MS.gene062121:CDS | 45.0% |
| ! | CTGTCAGACTCGATTTTCGT+TGG | - | chr2.3:45813281-45813300 | None:intergenic | 45.0% |
| ! | GAGTTTGTAGTGGTTTGCAC+TGG | + | chr2.3:45813567-45813586 | MS.gene062121:CDS | 45.0% |
| ! | GCCCAGTGCACCATATTTTT+AGG | - | chr2.3:45814767-45814786 | None:intergenic | 45.0% |
| ! | GTACCACTTCGAGTTTGTAG+TGG | + | chr2.3:45813557-45813576 | MS.gene062121:CDS | 45.0% |
| ! | GTACTCTCTCTTTTAGGCCA+TGG | - | chr2.3:45812617-45812636 | None:intergenic | 45.0% |
| ! | GTTTGGAATCGATGGATGGA+CGG | - | chr2.3:45817790-45817809 | None:intergenic | 45.0% |
| ! | TCATAGAGTCCTACTTGCTG+TGG | + | chr2.3:45817175-45817194 | MS.gene062121:CDS | 45.0% |
| ! | TGAGCCTTTCTGTAGCTTGT+TGG | + | chr2.3:45817452-45817471 | MS.gene062121:CDS | 45.0% |
| !! | AACCCTGATTTGGTGTTTGG+TGG | - | chr2.3:45816185-45816204 | None:intergenic | 45.0% |
| !! | AGCTTGTTGGAATACCCTAC+TGG | + | chr2.3:45817465-45817484 | MS.gene062121:CDS | 45.0% |
| !! | ATAATAGGTGCTGGAGTGAG+TGG | + | chr2.3:45812449-45812468 | MS.gene062121:CDS | 45.0% |
| !! | ATTTGGGTTGGCATACTTGG+AGG | + | chr2.3:45818036-45818055 | MS.gene062121:CDS | 45.0% |
| !! | CAATCCCATTTGTGTCGGTT+GGG | - | chr2.3:45816571-45816590 | None:intergenic | 45.0% |
| !! | CCATCCATCGATTCCAAACA+TGG | + | chr2.3:45817791-45817810 | MS.gene062121:CDS | 45.0% |
| !! | TCGGTATAGTTGGTGGTTTC+TGG | - | chr2.3:45817022-45817041 | None:intergenic | 45.0% |
| !! | TTATATATAAGTAAAATTAA+GGG | + | chr2.3:45816713-45816732 | MS.gene062121:intron | 5.0% |
| !! | TTTATATATAAGTAAAATTA+AGG | + | chr2.3:45816712-45816731 | MS.gene062121:intron | 5.0% |
| ACCTTACCCTTGAACACCTC+AGG | - | chr2.3:45813642-45813661 | None:intergenic | 50.0% | |
| AGGCTGAATCGTCTCCGAAA+TGG | - | chr2.3:45816468-45816487 | None:intergenic | 50.0% | |
| ATTGTGCATGGTTGCCCTTC+TGG | - | chr2.3:45816069-45816088 | None:intergenic | 50.0% | |
| CATCCGAGATACGTTCCATG+TGG | + | chr2.3:45817853-45817872 | MS.gene062121:CDS | 50.0% | |
| CCAACCGACACAAATGGGAT+TGG | + | chr2.3:45816569-45816588 | MS.gene062121:intron | 50.0% | |
| CCTCCACCAAACACCAAATC+AGG | + | chr2.3:45816179-45816198 | MS.gene062121:CDS | 50.0% | |
| CCTTACCCTTGAACACCTCA+GGG | - | chr2.3:45813641-45813660 | None:intergenic | 50.0% | |
| CGGAAGTTTCCACAGCAAGT+AGG | - | chr2.3:45817187-45817206 | None:intergenic | 50.0% | |
| CTCCCTTGATCAACTATGGG+TGG | - | chr2.3:45815423-45815442 | None:intergenic | 50.0% | |
| CTGGTACCATGCCACTATAC+AGG | + | chr2.3:45817484-45817503 | MS.gene062121:CDS | 50.0% | |
| GAATGTGCACAGGCAAACCA+AGG | + | chr2.3:45813774-45813793 | MS.gene062121:CDS | 50.0% | |
| GATATCCTCCTACCGACATG+AGG | + | chr2.3:45816538-45816557 | MS.gene062121:intron | 50.0% | |
| GCCAACATTTCCATGCACCA+AGG | + | chr2.3:45813614-45813633 | MS.gene062121:CDS | 50.0% | |
| GGGAAAGAAGGTTGTGGTTG+TGG | + | chr2.3:45813719-45813738 | MS.gene062121:CDS | 50.0% | |
| GTTTGCCTGTGCACATTCCA+TGG | - | chr2.3:45813772-45813791 | None:intergenic | 50.0% | |
| TATGTCCTCATGTCGGTAGG+AGG | - | chr2.3:45816546-45816565 | None:intergenic | 50.0% | |
| TCTAGCCATGGAATGTGCAC+AGG | + | chr2.3:45813764-45813783 | MS.gene062121:CDS | 50.0% | |
| ! | ATACGTTCCATGTGGCTTGC+TGG | + | chr2.3:45817861-45817880 | MS.gene062121:CDS | 50.0% |
| ! | CCAATCCCATTTGTGTCGGT+TGG | - | chr2.3:45816572-45816591 | None:intergenic | 50.0% |
| ! | CCCTTGGTGCATGGAAATGT+TGG | - | chr2.3:45813618-45813637 | None:intergenic | 50.0% |
| ! | TGTTTGGTGGAGGAACTGTG+CGG | - | chr2.3:45816172-45816191 | None:intergenic | 50.0% |
| !! | CCTGATTTGGTGTTTGGTGG+AGG | - | chr2.3:45816182-45816201 | None:intergenic | 50.0% |
| ACTTCCTGGTCGTCCTGTGT+GGG | + | chr2.3:45812802-45812821 | MS.gene062121:CDS | 55.0% | |
| GACCACGGAAATCCACTTCC+TGG | + | chr2.3:45812788-45812807 | MS.gene062121:CDS | 55.0% | |
| GGACGTCTACCCAATGACCA+CGG | + | chr2.3:45812773-45812792 | MS.gene062121:CDS | 55.0% | |
| TGGACAGAAAGCTCCCACAC+AGG | - | chr2.3:45812818-45812837 | None:intergenic | 55.0% | |
| ! | AAGGGCCCTGAGGTGTTCAA+GGG | + | chr2.3:45813633-45813652 | MS.gene062121:CDS | 55.0% |
| ! | CCCTGAGGTGTTCAAGGGTA+AGG | + | chr2.3:45813638-45813657 | MS.gene062121:CDS | 55.0% |
| ! | GACCAGGAAGTGGATTTCCG+TGG | - | chr2.3:45812793-45812812 | None:intergenic | 55.0% |
| ACCCTGAGCATAGGCCGAAG+GGG | - | chr2.3:45814795-45814814 | None:intergenic | 60.0% | |
| CACACAGGACGACCAGGAAG+TGG | - | chr2.3:45812803-45812822 | None:intergenic | 60.0% | |
| CACTTCCTGGTCGTCCTGTG+TGG | + | chr2.3:45812801-45812820 | MS.gene062121:CDS | 60.0% | |
| CTTGAACACCTCAGGGCCCT+TGG | - | chr2.3:45813634-45813653 | None:intergenic | 60.0% | |
| GACCCTGAGCATAGGCCGAA+GGG | - | chr2.3:45814796-45814815 | None:intergenic | 60.0% | |
| TCAGGGGTGACCCTGAGCAT+AGG | - | chr2.3:45814804-45814823 | None:intergenic | 60.0% | |
| TGACCCTGAGCATAGGCCGA+AGG | - | chr2.3:45814797-45814816 | None:intergenic | 60.0% | |
| ! | CAAGGGCCCTGAGGTGTTCA+AGG | + | chr2.3:45813632-45813651 | MS.gene062121:CDS | 60.0% |
| AGCTCCCACACAGGACGACC+AGG | - | chr2.3:45812809-45812828 | None:intergenic | 65.0% | |
| CTGAGCATAGGCCGAAGGGG+CGG | - | chr2.3:45814792-45814811 | None:intergenic | 65.0% | |
| GCCCCTTCGGCCTATGCTCA+GGG | + | chr2.3:45814791-45814810 | MS.gene062121:intron | 65.0% | |
| TCCATGCACCAAGGGCCCTG+AGG | + | chr2.3:45813623-45813642 | MS.gene062121:CDS | 65.0% | |
| ! | ACCTCAGGGCCCTTGGTGCA+TGG | - | chr2.3:45813627-45813646 | None:intergenic | 65.0% |
| CGCCCCTTCGGCCTATGCTC+AGG | + | chr2.3:45814790-45814809 | MS.gene062121:intron | 70.0% | |
| GCACTGGGCTGCCGCCCCTT+CGG | + | chr2.3:45814778-45814797 | MS.gene062121:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 45812404 | 45818124 | 45812404 | ID=MS.gene062121 |
| chr2.3 | mRNA | 45812404 | 45818124 | 45812404 | ID=MS.gene062121.t1;Parent=MS.gene062121 |
| chr2.3 | exon | 45812404 | 45812862 | 45812404 | ID=MS.gene062121.t1.exon1;Parent=MS.gene062121.t1 |
| chr2.3 | CDS | 45812404 | 45812862 | 45812404 | ID=cds.MS.gene062121.t1;Parent=MS.gene062121.t1 |
| chr2.3 | exon | 45813555 | 45813795 | 45813555 | ID=MS.gene062121.t1.exon2;Parent=MS.gene062121.t1 |
| chr2.3 | CDS | 45813555 | 45813795 | 45813555 | ID=cds.MS.gene062121.t1;Parent=MS.gene062121.t1 |
| chr2.3 | exon | 45816064 | 45816242 | 45816064 | ID=MS.gene062121.t1.exon3;Parent=MS.gene062121.t1 |
| chr2.3 | CDS | 45816064 | 45816242 | 45816064 | ID=cds.MS.gene062121.t1;Parent=MS.gene062121.t1 |
| chr2.3 | exon | 45817156 | 45817505 | 45817156 | ID=MS.gene062121.t1.exon4;Parent=MS.gene062121.t1 |
| chr2.3 | CDS | 45817156 | 45817505 | 45817156 | ID=cds.MS.gene062121.t1;Parent=MS.gene062121.t1 |
| chr2.3 | exon | 45817782 | 45818124 | 45817782 | ID=MS.gene062121.t1.exon5;Parent=MS.gene062121.t1 |
| chr2.3 | CDS | 45817782 | 45818124 | 45817782 | ID=cds.MS.gene062121.t1;Parent=MS.gene062121.t1 |
| Gene Sequence |
| Protein sequence |
