AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069124


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069124.t1 MTR_5g031840 95.708 466 19 1 1 465 1 466 0.0 927
MS.gene069124.t1 MTR_5g031830 77.039 466 104 1 3 465 10 475 0.0 747
MS.gene069124.t1 MTR_5g031860 78.280 465 97 2 4 465 11 474 0.0 746
MS.gene069124.t1 MTR_5g464760 39.425 487 255 15 4 464 11 483 3.26e-98 303
MS.gene069124.t1 MTR_5g464810 38.351 485 251 12 5 460 12 477 2.28e-96 298
MS.gene069124.t1 MTR_5g064240 38.351 485 251 12 5 460 12 477 2.28e-96 298
MS.gene069124.t1 MTR_0036s0220 38.095 483 257 14 4 460 11 477 4.01e-94 293
MS.gene069124.t1 MTR_6g014187 34.105 475 291 8 4 460 9 479 5.17e-94 293
MS.gene069124.t1 MTR_6g013960 34.316 475 290 8 4 460 9 479 1.41e-93 291
MS.gene069124.t1 MTR_7g011470 36.809 470 267 10 4 460 9 461 4.86e-93 290
MS.gene069124.t1 MTR_7g011470 36.383 470 273 9 4 460 9 465 6.07e-93 290
MS.gene069124.t1 MTR_6g014040 35.983 478 279 11 4 460 9 480 5.64e-92 287
MS.gene069124.t1 MTR_6g013450 34.172 477 289 10 4 460 9 480 6.08e-92 287
MS.gene069124.t1 MTR_6g013900 36.632 475 274 11 4 458 9 476 2.06e-91 286
MS.gene069124.t1 MTR_5g058320 33.906 466 289 7 4 460 9 464 8.79e-91 284
MS.gene069124.t1 MTR_6g014270 33.891 478 290 9 4 460 6 478 1.20e-90 284
MS.gene069124.t1 MTR_6g013440 34.728 478 284 12 4 460 10 480 1.57e-90 284
MS.gene069124.t1 MTR_6g014220 35.654 474 283 11 4 460 9 477 2.16e-90 283
MS.gene069124.t1 MTR_8g059425 34.091 484 277 13 4 460 9 477 8.76e-89 279
MS.gene069124.t1 MTR_6g014200 34.737 475 288 8 4 460 6 476 6.64e-88 277
MS.gene069124.t1 MTR_6g014020 33.753 477 290 10 4 460 9 479 7.95e-88 277
MS.gene069124.t1 MTR_2g008210 35.881 471 284 9 4 460 10 476 4.47e-87 275
MS.gene069124.t1 MTR_6g013920 35.685 482 269 10 4 458 9 476 5.15e-87 275
MS.gene069124.t1 MTR_6g014250 33.898 472 292 10 5 460 10 477 6.83e-87 274
MS.gene069124.t1 MTR_6g013990 35.000 480 278 12 4 460 9 477 2.52e-86 273
MS.gene069124.t1 MTR_3g479520 34.096 481 285 11 2 460 12 482 4.09e-86 272
MS.gene069124.t1 MTR_4g094220 34.238 479 289 10 4 461 6 479 7.43e-86 271
MS.gene069124.t1 MTR_6g014050 35.565 478 280 12 4 460 10 480 1.13e-85 271
MS.gene069124.t1 MTR_0288s0020 33.333 477 273 10 4 460 9 460 2.78e-85 270
MS.gene069124.t1 MTR_6g014150 34.244 476 289 9 4 460 6 476 3.34e-85 270
MS.gene069124.t1 MTR_6g011340 34.034 476 290 9 4 460 9 479 1.22e-84 268
MS.gene069124.t1 MTR_6g014310 34.461 473 286 11 4 457 10 477 7.57e-84 266
MS.gene069124.t1 MTR_6g014290 33.475 472 292 11 4 458 9 475 3.05e-83 265
MS.gene069124.t1 MTR_3g008010 33.475 472 292 11 4 458 9 475 3.43e-83 265
MS.gene069124.t1 MTR_3g079480 32.708 480 289 12 2 458 18 486 1.76e-82 263
MS.gene069124.t1 MTR_3g479470 34.647 482 276 13 2 458 10 477 4.24e-82 262
MS.gene069124.t1 MTR_3g479490 34.526 475 279 13 5 457 6 470 1.13e-81 261
MS.gene069124.t1 MTR_6g014300 33.193 476 278 12 4 460 11 465 1.96e-81 259
MS.gene069124.t1 MTR_4g064987 34.519 478 261 16 6 464 9 453 7.69e-76 244
MS.gene069124.t1 MTR_6g014170 33.122 474 279 12 4 460 9 461 2.03e-75 244
MS.gene069124.t1 MTR_3g069710 32.347 473 274 13 6 463 13 454 2.13e-75 244
MS.gene069124.t1 MTR_3g069690 33.891 478 264 14 5 463 8 452 2.19e-74 241
MS.gene069124.t1 MTR_4g064987 34.310 478 256 17 6 464 9 447 1.11e-73 239
MS.gene069124.t1 MTR_6g014240 33.262 469 271 14 5 460 7 446 8.76e-73 237
MS.gene069124.t1 MTR_6g014190 39.789 284 167 3 180 460 4 286 3.44e-71 228
MS.gene069124.t1 MTR_7g013200 31.646 474 273 12 1 459 1 438 3.75e-65 216
MS.gene069124.t1 MTR_7g013220 31.950 482 276 13 1 461 1 451 2.61e-64 214
MS.gene069124.t1 MTR_8g088560 33.191 470 280 15 5 461 10 458 6.51e-64 214
MS.gene069124.t1 MTR_0477s0010 34.582 347 178 8 125 460 8 316 3.67e-63 207
MS.gene069124.t1 MTR_7g013240 30.835 467 279 12 4 459 5 438 1.25e-61 207
MS.gene069124.t1 MTR_7g080935 30.266 489 271 13 5 465 11 457 2.74e-61 207
MS.gene069124.t1 MTR_7g080940 30.444 473 284 15 5 463 11 452 5.15e-61 206
MS.gene069124.t1 MTR_0891s0010 36.491 285 174 4 180 458 4 287 1.14e-60 200
MS.gene069124.t1 MTR_6g038230 33.333 471 266 17 5 457 11 451 4.88e-60 203
MS.gene069124.t1 MTR_7g080950 30.208 480 276 16 5 463 6 447 5.79e-60 203
MS.gene069124.t1 MTR_6g038300 31.635 471 279 15 3 457 9 452 1.57e-59 202
MS.gene069124.t1 MTR_3g479610 36.458 288 174 5 180 460 27 312 1.80e-59 198
MS.gene069124.t1 MTR_6g014186 28.810 479 277 11 2 460 4 438 5.64e-59 200
MS.gene069124.t1 MTR_5g035560 31.635 471 277 15 5 460 11 451 2.05e-58 200
MS.gene069124.t1 MTR_7g013260 30.472 466 283 11 4 459 5 439 2.49e-57 196
MS.gene069124.t1 MTR_5g035580 30.021 473 282 15 5 460 13 453 5.52e-57 196
MS.gene069124.t1 MTR_6g038240 31.144 472 281 16 2 457 8 451 2.88e-56 193
MS.gene069124.t1 MTR_1g107380 29.895 475 299 12 5 460 13 472 1.89e-55 192
MS.gene069124.t1 MTR_8g007585 44.335 203 111 2 260 460 189 391 3.53e-55 189
MS.gene069124.t1 MTR_8g043470 31.267 371 210 7 98 460 44 377 3.88e-55 188
MS.gene069124.t1 MTR_3g084520 30.658 486 296 13 5 464 6 476 4.44e-55 191
MS.gene069124.t1 MTR_6g038200 30.913 482 263 17 5 457 11 451 2.59e-54 188
MS.gene069124.t1 MTR_8g066610 29.607 483 307 15 5 464 9 481 4.78e-54 188
MS.gene069124.t1 MTR_7g080900 29.114 474 291 15 5 463 12 455 2.08e-53 186
MS.gene069124.t1 MTR_6g038220 29.916 478 276 19 3 457 9 450 1.98e-52 183
MS.gene069124.t1 MTR_6g014160 33.217 286 155 5 108 388 104 358 1.51e-51 179
MS.gene069124.t1 MTR_8g083290 28.125 480 298 15 4 457 2 460 9.95e-51 179
MS.gene069124.t1 MTR_1g107350 29.918 488 292 19 2 461 4 469 5.64e-50 177
MS.gene069124.t1 MTR_3g084530 31.405 484 287 13 5 460 6 472 8.15e-50 176
MS.gene069124.t1 MTR_1g107315 29.835 486 290 19 5 462 8 470 1.03e-49 177
MS.gene069124.t1 MTR_1g032490 29.388 490 289 19 5 463 10 473 1.31e-49 176
MS.gene069124.t1 MTR_7g102450 29.243 489 293 15 1 460 7 471 7.52e-49 174
MS.gene069124.t1 MTR_7g102560 30.417 503 275 18 5 460 9 483 1.67e-48 173
MS.gene069124.t1 MTR_6g013680 30.362 359 191 7 108 460 69 374 2.20e-48 170
MS.gene069124.t1 MTR_3g084540 30.041 486 300 11 5 464 6 477 2.51e-48 172
MS.gene069124.t1 MTR_3g009510 27.789 511 291 15 1 464 1 480 3.17e-48 172
MS.gene069124.t1 MTR_4g485630 27.178 482 312 16 5 462 9 475 1.30e-47 171
MS.gene069124.t1 MTR_8g027885 29.787 470 268 16 4 444 17 453 3.70e-47 169
MS.gene069124.t1 MTR_4g094920 28.936 470 296 15 6 457 27 476 4.94e-47 170
MS.gene069124.t1 MTR_1g107375 28.243 478 291 15 5 461 8 454 5.19e-47 169
MS.gene069124.t1 MTR_5g016480 26.775 493 294 14 2 457 5 467 5.40e-47 169
MS.gene069124.t1 MTR_7g117405 29.167 504 280 19 2 460 9 480 5.41e-47 169
MS.gene069124.t1 MTR_7g013180 27.872 470 296 12 1 455 1 442 5.48e-47 168
MS.gene069124.t1 MTR_8g064870 28.247 485 299 18 6 462 12 475 7.19e-47 169
MS.gene069124.t1 MTR_8g090095 31.056 483 268 18 10 460 30 479 9.06e-47 169
MS.gene069124.t1 MTR_7g117170 29.878 492 272 20 4 456 14 471 1.86e-46 168
MS.gene069124.t1 MTR_1g107360 28.542 480 299 16 2 460 5 461 9.33e-46 166
MS.gene069124.t1 MTR_3g049970 28.189 486 305 15 2 462 5 471 1.19e-45 166
MS.gene069124.t1 MTR_8g083280 30.515 485 276 18 6 460 8 461 1.55e-45 165
MS.gene069124.t1 MTR_4g095008 28.542 480 287 18 5 457 11 461 1.90e-45 166
MS.gene069124.t1 MTR_6g033625 27.406 478 302 14 6 458 5 462 3.90e-45 164
MS.gene069124.t1 MTR_8g009063 28.106 491 286 18 2 456 10 469 6.93e-45 163
MS.gene069124.t1 MTR_5g072860 27.932 469 304 14 5 460 18 465 9.59e-45 163
MS.gene069124.t1 MTR_1g107365 28.392 479 297 15 2 461 41 492 1.70e-44 163
MS.gene069124.t1 MTR_8g009050 29.352 494 290 16 2 463 3 469 1.94e-44 162
MS.gene069124.t1 MTR_4g485620 31.738 397 235 15 87 463 77 457 2.83e-44 161
MS.gene069124.t1 MTR_8g027870 28.512 477 265 17 4 444 17 453 4.69e-44 161
MS.gene069124.t1 MTR_1g062380 28.169 497 297 20 5 460 16 493 8.87e-44 161
MS.gene069124.t1 MTR_6g033725 27.311 476 298 16 6 456 5 457 1.01e-43 160
MS.gene069124.t1 MTR_6g014185 35.409 257 130 5 211 463 123 347 2.68e-43 156
MS.gene069124.t1 MTR_7g070610 26.411 496 309 14 5 463 13 489 3.18e-43 159
MS.gene069124.t1 MTR_5g070090 29.916 478 283 18 7 460 12 461 3.66e-43 158
MS.gene069124.t1 MTR_8g064880 27.489 462 286 17 2 433 5 447 6.04e-43 158
MS.gene069124.t1 MTR_5g045960 27.586 493 304 16 5 460 9 485 7.54e-43 158
MS.gene069124.t1 MTR_8g008990 27.621 496 298 16 2 463 3 471 8.00e-43 157
MS.gene069124.t1 MTR_8g006710 27.292 480 311 13 4 462 5 467 1.36e-42 157
MS.gene069124.t1 MTR_5g045970 28.629 496 305 16 5 465 16 497 1.37e-42 157
MS.gene069124.t1 MTR_7g070660 27.823 496 297 18 5 463 11 482 1.85e-42 157
MS.gene069124.t1 MTR_7g071040 28.252 492 305 17 5 463 17 493 2.50e-42 157
MS.gene069124.t1 MTR_8g465670 28.024 496 277 18 6 457 8 467 2.87e-42 156
MS.gene069124.t1 MTR_8g077590 33.156 377 198 17 108 456 112 462 5.97e-42 155
MS.gene069124.t1 MTR_4g024020 28.138 494 308 17 5 463 9 490 2.43e-41 154
MS.gene069124.t1 MTR_8g009055 27.403 489 306 15 2 463 3 469 3.09e-41 153
MS.gene069124.t1 MTR_1g107285 25.786 477 312 12 6 461 9 464 4.82e-41 153
MS.gene069124.t1 MTR_5g090670 26.378 508 294 19 1 460 1 476 4.92e-41 153
MS.gene069124.t1 MTR_4g108250 27.237 503 299 18 5 463 11 490 6.74e-41 153
MS.gene069124.t1 MTR_8g006730 27.403 489 286 17 5 456 6 462 8.01e-41 152
MS.gene069124.t1 MTR_7g055710 27.423 485 305 14 5 457 11 480 9.87e-41 152
MS.gene069124.t1 MTR_7g070800 27.088 491 308 14 5 463 6 478 1.77e-40 152
MS.gene069124.t1 MTR_6g033615 26.316 475 297 12 6 458 5 448 1.78e-40 151
MS.gene069124.t1 MTR_7g102550 26.923 494 302 13 5 458 9 483 1.79e-40 151
MS.gene069124.t1 MTR_7g102490 27.347 490 310 17 5 460 9 486 2.82e-40 151
MS.gene069124.t1 MTR_7g070740 26.775 493 310 15 5 463 11 486 4.15e-40 150
MS.gene069124.t1 MTR_7g102520 30.181 497 290 19 5 462 12 490 4.41e-40 151
MS.gene069124.t1 MTR_1g019510 27.383 493 298 17 2 463 3 466 4.85e-40 150
MS.gene069124.t1 MTR_6g488280 29.106 481 284 17 6 456 7 460 1.09e-39 149
MS.gene069124.t1 MTR_0428s0010 29.106 481 284 17 6 456 7 460 1.09e-39 149
MS.gene069124.t1 MTR_6g035295 28.049 492 303 16 6 463 13 487 1.64e-39 149
MS.gene069124.t1 MTR_3g031450 27.615 478 280 15 5 460 18 451 2.06e-39 148
MS.gene069124.t1 MTR_5g016660 27.621 496 299 18 7 463 12 486 4.03e-39 148
MS.gene069124.t1 MTR_1g029540 34.586 266 148 5 213 460 202 459 4.65e-39 147
MS.gene069124.t1 MTR_5g075440 26.439 469 303 14 5 457 10 452 5.42e-39 147
MS.gene069124.t1 MTR_6g033675 26.708 483 295 16 6 456 5 460 6.31e-39 147
MS.gene069124.t1 MTR_8g009073 29.158 487 284 20 2 456 3 460 6.95e-39 147
MS.gene069124.t1 MTR_5g090580 26.190 504 298 17 1 460 1 474 9.61e-39 146
MS.gene069124.t1 MTR_8g009067 28.512 484 293 17 2 457 3 461 1.32e-38 146
MS.gene069124.t1 MTR_6g023665 28.099 484 285 19 6 456 14 467 1.45e-38 146
MS.gene069124.t1 MTR_4g008630 35.714 266 144 6 213 460 206 462 1.50e-38 145
MS.gene069124.t1 MTR_5g098960 27.546 432 276 11 1 420 3 409 1.59e-38 145
MS.gene069124.t1 MTR_0184s0030 30.704 355 206 12 117 449 120 456 1.84e-38 145
MS.gene069124.t1 MTR_4g031800 33.569 283 160 7 205 463 197 475 2.16e-38 145
MS.gene069124.t1 MTR_5g090700 26.087 506 298 20 1 460 1 476 5.10e-38 144
MS.gene069124.t1 MTR_8g006260 30.846 402 213 13 98 464 102 473 5.21e-38 144
MS.gene069124.t1 MTR_7g070940 26.559 497 297 14 5 463 9 475 5.43e-38 144
MS.gene069124.t1 MTR_6g005600 25.731 513 290 19 1 464 1 471 6.12e-38 144
MS.gene069124.t1 MTR_8g012650 31.351 370 207 15 108 449 110 460 6.18e-38 144
MS.gene069124.t1 MTR_5g072810 27.329 483 287 16 5 462 12 455 6.62e-38 144
MS.gene069124.t1 MTR_8g006270 31.852 270 147 5 213 457 203 460 9.50e-38 144
MS.gene069124.t1 MTR_6g033660 25.000 484 301 16 6 456 5 459 9.71e-38 144
MS.gene069124.t1 MTR_8g006220 28.458 506 271 19 6 457 7 475 1.03e-37 144
MS.gene069124.t1 MTR_0078s0010 26.600 500 292 19 5 464 6 470 1.10e-37 144
MS.gene069124.t1 MTR_5g087620 28.571 518 282 23 4 463 9 496 1.51e-37 144
MS.gene069124.t1 MTR_5g098930 26.008 496 302 16 1 460 1 467 1.54e-37 143
MS.gene069124.t1 MTR_7g047030 26.908 498 299 16 2 464 3 470 1.65e-37 143
MS.gene069124.t1 MTR_7g047270 26.908 498 299 16 2 464 3 470 1.65e-37 143
MS.gene069124.t1 MTR_7g070860 25.971 489 302 13 5 463 7 465 2.24e-37 143
MS.gene069124.t1 MTR_8g012730 35.317 252 140 7 220 448 45 296 2.96e-37 139
MS.gene069124.t1 MTR_5g066390 41.875 160 83 4 307 460 59 214 4.09e-37 135
MS.gene069124.t1 MTR_7g070930 26.273 491 316 16 5 463 14 490 4.61e-37 142
MS.gene069124.t1 MTR_7g102460 27.607 489 308 18 5 460 9 484 5.66e-37 142
MS.gene069124.t1 MTR_7g070810 25.050 503 300 16 5 463 9 478 6.03e-37 142
MS.gene069124.t1 MTR_3g031400 27.463 477 280 16 5 460 18 449 6.04e-37 141
MS.gene069124.t1 MTR_8g008970 28.893 488 284 19 2 456 3 460 6.34e-37 144
MS.gene069124.t1 MTR_8g008970 31.095 283 170 8 189 463 526 791 5.49e-30 124
MS.gene069124.t1 MTR_5g090600 25.255 491 298 17 1 460 1 453 7.62e-37 141
MS.gene069124.t1 MTR_7g070910 26.585 489 317 13 5 463 11 487 8.53e-37 141
MS.gene069124.t1 MTR_8g009067 30.194 361 208 12 121 457 3 343 1.71e-36 138
MS.gene069124.t1 MTR_8g009073 34.420 276 142 11 213 463 77 338 2.47e-36 137
MS.gene069124.t1 MTR_8g012630 38.835 206 104 6 270 453 203 408 2.55e-36 139
MS.gene069124.t1 MTR_5g090630 25.866 491 307 16 1 460 1 465 2.72e-36 139
MS.gene069124.t1 MTR_2g034990 26.273 491 303 16 10 463 16 484 2.85e-36 140
MS.gene069124.t1 MTR_8g012635 29.082 392 224 15 97 453 92 464 3.01e-36 139
MS.gene069124.t1 MTR_5g072830 26.371 474 300 14 5 462 10 450 4.30e-36 139
MS.gene069124.t1 MTR_8g012745 29.428 367 215 14 108 449 110 457 4.67e-36 139
MS.gene069124.t1 MTR_4g082820 34.686 271 142 10 211 458 203 461 4.99e-36 139
MS.gene069124.t1 MTR_5g070040 28.542 480 298 18 1 457 6 463 6.49e-36 139
MS.gene069124.t1 MTR_4g117960 26.639 488 304 17 10 463 16 483 7.71e-36 139
MS.gene069124.t1 MTR_5g067170 26.854 499 307 16 1 463 6 482 9.55e-36 138
MS.gene069124.t1 MTR_0536s0020 31.834 289 168 8 200 461 194 480 9.74e-36 138
MS.gene069124.t1 MTR_5g040030 27.548 363 234 9 122 463 136 490 1.09e-35 138
MS.gene069124.t1 MTR_5g072820 26.569 478 294 15 5 462 10 450 1.39e-35 137
MS.gene069124.t1 MTR_4g117980 26.978 493 297 18 10 463 16 484 1.88e-35 137
MS.gene069124.t1 MTR_2086s0010 36.872 179 94 4 293 460 1 171 1.92e-35 130
MS.gene069124.t1 MTR_1996s0010 36.872 179 94 4 293 460 1 171 1.92e-35 130
MS.gene069124.t1 MTR_2g035040 28.238 386 232 12 110 465 24 394 2.20e-35 135
MS.gene069124.t1 MTR_5g090660 25.150 501 305 17 1 460 1 472 2.60e-35 138
MS.gene069124.t1 MTR_4g485590 28.261 414 242 13 3 402 7 379 2.99e-35 135
MS.gene069124.t1 MTR_0078s0060 31.636 275 154 9 213 464 206 469 3.18e-35 137
MS.gene069124.t1 MTR_7g046490 30.556 360 203 14 123 457 123 460 3.92e-35 136
MS.gene069124.t1 MTR_4g485640 30.000 280 170 8 200 458 390 664 5.93e-35 138
MS.gene069124.t1 MTR_0009s0240 26.844 488 297 18 5 464 7 462 6.27e-35 135
MS.gene069124.t1 MTR_6g013435 28.280 343 190 8 120 460 18 306 6.51e-35 132
MS.gene069124.t1 MTR_4g082810 41.538 195 91 6 213 394 211 395 6.69e-35 135
MS.gene069124.t1 MTR_0184s0040 30.566 265 154 7 213 456 221 476 7.90e-35 135
MS.gene069124.t1 MTR_0078s0190 30.566 265 154 7 213 456 221 476 7.90e-35 135
MS.gene069124.t1 MTR_2g059240 27.406 478 305 16 4 460 12 468 9.99e-35 135
MS.gene069124.t1 MTR_4g118000 32.177 317 176 11 175 461 160 467 1.56e-34 135
MS.gene069124.t1 MTR_6g035185 26.923 520 279 22 1 461 6 483 2.13e-34 135
MS.gene069124.t1 MTR_7g070780 26.016 492 315 16 5 463 11 486 2.35e-34 134
MS.gene069124.t1 MTR_5g072840 26.708 483 287 16 5 462 10 450 4.11e-34 133
MS.gene069124.t1 MTR_4g128690 28.142 366 229 10 105 462 115 454 4.30e-34 133
MS.gene069124.t1 MTR_5g090620 24.600 500 312 16 1 460 1 475 5.33e-34 133
MS.gene069124.t1 MTR_5g004940 35.096 208 116 4 262 464 188 381 5.79e-34 132
MS.gene069124.t1 MTR_2g040530 27.344 384 239 12 96 458 98 462 1.13e-33 132
MS.gene069124.t1 MTR_6g035265 28.117 409 236 17 86 458 85 471 2.07e-33 132
MS.gene069124.t1 MTR_4g128720 25.424 472 317 16 1 462 11 457 4.51e-33 130
MS.gene069124.t1 MTR_2g098430 26.478 423 260 15 2 396 3 402 8.10e-33 130
MS.gene069124.t1 MTR_4g117950 25.911 494 306 17 1 463 1 465 1.98e-32 129
MS.gene069124.t1 MTR_8g044140 29.197 274 172 6 211 463 179 451 2.20e-32 129
MS.gene069124.t1 MTR_7g012120 27.439 492 293 21 10 463 21 486 3.82e-32 128
MS.gene069124.t1 MTR_5g019580 27.833 503 271 24 5 453 7 471 4.13e-32 128
MS.gene069124.t1 MTR_6g014000 43.284 134 75 1 327 459 21 154 5.24e-32 128
MS.gene069124.t1 MTR_7g070870 32.692 260 151 7 211 463 219 461 5.70e-32 127
MS.gene069124.t1 MTR_5g039900 25.306 490 317 16 6 463 14 486 6.13e-32 128
MS.gene069124.t1 MTR_8g071070 25.667 487 314 14 5 464 7 472 8.30e-32 127
MS.gene069124.t1 MTR_4g117890 29.693 293 176 8 199 463 187 477 8.56e-32 127
MS.gene069124.t1 MTR_5g019580 30.903 288 150 10 201 453 222 495 1.52e-31 127
MS.gene069124.t1 MTR_1g040310 31.148 244 151 4 237 463 243 486 1.93e-31 126
MS.gene069124.t1 MTR_2g046820 30.195 308 182 9 173 458 164 460 1.96e-31 126
MS.gene069124.t1 MTR_2g046750 29.167 264 160 6 214 458 208 463 3.44e-31 125
MS.gene069124.t1 MTR_2g035020 25.703 498 301 18 6 461 12 482 3.54e-31 125
MS.gene069124.t1 MTR_0536s0010 26.389 504 290 19 1 463 16 479 1.01e-30 124
MS.gene069124.t1 MTR_5g090610 25.253 495 302 16 1 461 1 461 2.75e-30 122
MS.gene069124.t1 MTR_1g019520 33.010 206 119 4 270 456 3 208 5.95e-30 116
MS.gene069124.t1 MTR_5g029800 26.113 494 292 17 10 461 16 478 8.11e-30 122
MS.gene069124.t1 MTR_7g039550 30.418 263 165 4 219 463 2 264 8.17e-30 117
MS.gene069124.t1 MTR_7g470610 33.182 220 138 5 214 427 74 290 1.75e-29 117
MS.gene069124.t1 MTR_7g070583 33.182 220 138 5 214 427 74 290 1.75e-29 117
MS.gene069124.t1 MTR_7g071050 26.897 435 256 13 5 431 13 393 2.98e-29 119
MS.gene069124.t1 MTR_8g032950 30.556 288 165 10 204 461 199 481 8.51e-29 119
MS.gene069124.t1 MTR_8g074550 28.859 298 150 11 211 460 205 488 1.42e-28 118
MS.gene069124.t1 MTR_6g013890 27.530 247 122 5 181 425 47 238 6.99e-28 112
MS.gene069124.t1 MTR_8g056740 33.333 234 136 7 204 427 103 326 8.70e-28 114
MS.gene069124.t1 MTR_6g078320 29.630 270 162 8 198 448 207 467 2.80e-27 114
MS.gene069124.t1 MTR_5g072850 29.221 308 164 9 164 457 111 378 5.74e-27 112
MS.gene069124.t1 MTR_7g067330 25.169 445 276 14 5 438 9 407 9.07e-27 112
MS.gene069124.t1 MTR_7g080960 32.990 194 83 4 270 463 324 470 5.75e-26 110
MS.gene069124.t1 MTR_8g009840 32.995 197 110 5 288 463 333 528 1.56e-25 109
MS.gene069124.t1 MTR_7g067120 24.944 449 276 16 5 440 9 409 2.40e-25 108
MS.gene069124.t1 MTR_5g027210 30.488 246 142 9 214 432 212 455 3.90e-25 108
MS.gene069124.t1 MTR_8g466240 23.918 485 307 16 5 463 8 456 1.04e-24 106
MS.gene069124.t1 MTR_7g070760 33.000 200 109 4 207 404 25 201 6.06e-24 99.8
MS.gene069124.t1 MTR_3g009490 34.946 186 95 6 297 458 3 186 7.54e-23 96.3
MS.gene069124.t1 MTR_8g007565 24.700 417 265 12 2 394 4 395 8.30e-23 101
MS.gene069124.t1 MTR_1g090270 24.499 449 286 17 5 431 15 432 1.40e-22 100
MS.gene069124.t1 MTR_8g007650 24.700 417 265 12 2 394 4 395 1.68e-22 100
MS.gene069124.t1 MTR_5g066410 41.667 132 71 5 268 394 241 371 4.03e-22 99.0
MS.gene069124.t1 MTR_0536s0030 35.849 159 85 4 322 463 196 354 5.50e-22 97.4
MS.gene069124.t1 MTR_8g068360 26.277 411 260 15 5 396 12 398 5.73e-22 98.6
MS.gene069124.t1 MTR_6g036650 25.791 411 260 14 5 396 18 402 1.60e-21 97.4
MS.gene069124.t1 MTR_2g008226 23.778 450 312 14 5 436 10 446 5.30e-21 95.9
MS.gene069124.t1 MTR_7g070995 34.247 146 81 2 333 463 2 147 9.55e-21 89.4
MS.gene069124.t1 MTR_8g068340 34.091 176 105 6 273 438 272 446 1.19e-20 94.7
MS.gene069124.t1 MTR_8g068330 36.719 128 77 2 273 396 268 395 1.92e-20 94.0
MS.gene069124.t1 MTR_2g008220 25.610 410 260 15 5 396 14 396 2.96e-20 93.6
MS.gene069124.t1 MTR_4g123553 24.450 409 261 13 5 396 15 392 4.37e-20 92.8
MS.gene069124.t1 MTR_1g107325 33.333 153 95 1 316 461 201 353 4.50e-20 92.0
MS.gene069124.t1 MTR_6g042310 23.620 453 303 16 5 440 18 444 5.32e-19 89.7
MS.gene069124.t1 MTR_3g435310 37.302 126 77 2 272 396 227 351 5.81e-19 89.4
MS.gene069124.t1 MTR_2g008225 24.882 422 248 16 5 396 15 397 5.88e-19 89.7
MS.gene069124.t1 MTR_4g079250 24.524 420 267 16 5 405 8 396 1.13e-18 88.6
MS.gene069124.t1 MTR_5g090690 25.784 287 141 9 108 372 69 305 1.30e-18 87.8
MS.gene069124.t1 MTR_8g006230 29.583 240 145 9 105 339 49 269 4.69e-18 84.7
MS.gene069124.t1 MTR_4g077960 25.122 410 237 17 15 396 2 369 4.16e-17 83.6
MS.gene069124.t1 MTR_3g479620 31.285 179 90 5 2 162 3 166 6.20e-17 79.0
MS.gene069124.t1 MTR_2g046620 23.040 421 252 14 5 396 16 393 3.33e-16 81.3
MS.gene069124.t1 MTR_4g079270 22.768 448 295 15 5 431 8 425 1.07e-15 79.7
MS.gene069124.t1 MTR_4g059370 32.374 139 86 4 273 404 190 327 1.54e-14 75.5
MS.gene069124.t1 MTR_2g014900 20.767 443 300 12 5 426 7 419 7.54e-14 73.9
MS.gene069124.t1 MTR_0199s0010 24.031 258 173 7 5 243 10 263 2.52e-13 70.5
MS.gene069124.t1 MTR_0475s0030 42.857 63 36 0 356 418 13 75 1.15e-12 64.3
MS.gene069124.t1 MTR_0078s0200 27.404 208 132 6 112 317 115 305 1.67e-12 68.6
MS.gene069124.t1 MTR_6g014195 26.866 201 126 8 4 186 9 206 6.97e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069124.t1 AT1G22380 35.537 484 274 11 2 460 10 480 1.96e-94 294
MS.gene069124.t1 AT1G22400 32.017 481 290 10 2 457 10 478 5.60e-88 277
MS.gene069124.t1 AT1G22360 33.128 486 277 11 5 460 10 477 3.36e-87 275
MS.gene069124.t1 AT1G22340 33.820 479 290 11 2 460 10 481 1.59e-85 271
MS.gene069124.t1 AT1G22360 33.126 483 269 12 5 460 10 465 9.88e-85 268
MS.gene069124.t1 AT1G78270 34.034 476 292 11 2 460 10 480 1.20e-84 269
MS.gene069124.t1 AT1G22370 33.128 486 278 11 2 460 10 475 3.02e-84 267
MS.gene069124.t1 AT3G11340 34.167 480 266 15 1 463 1 447 1.00e-76 247
MS.gene069124.t1 AT5G05880 32.770 473 273 11 5 462 8 450 9.83e-71 231
MS.gene069124.t1 AT5G05900 33.474 475 262 15 5 460 8 447 2.86e-70 230
MS.gene069124.t1 AT5G05890 32.347 473 279 14 5 462 8 454 3.84e-69 227
MS.gene069124.t1 AT3G55710 31.158 475 286 15 5 463 8 457 1.03e-66 221
MS.gene069124.t1 AT3G46660 33.403 479 263 15 6 463 15 458 1.94e-66 220
MS.gene069124.t1 AT3G46680 31.712 473 274 14 2 457 6 446 3.42e-66 219
MS.gene069124.t1 AT3G46670 32.558 473 275 14 5 463 9 451 4.17e-66 219
MS.gene069124.t1 AT3G46700 32.563 476 273 13 1 462 5 446 1.09e-65 218
MS.gene069124.t1 AT5G05860 32.696 471 270 14 5 460 9 447 2.07e-65 217
MS.gene069124.t1 AT3G55700 30.105 475 287 13 5 463 8 453 2.40e-64 215
MS.gene069124.t1 AT5G05870 30.962 478 277 12 5 460 8 454 7.86e-63 211
MS.gene069124.t1 AT3G46720 31.866 477 269 17 2 462 6 442 1.53e-61 207
MS.gene069124.t1 AT3G46690 31.942 479 277 15 1 462 5 451 2.63e-61 207
MS.gene069124.t1 AT5G59580 30.932 472 279 16 5 461 9 448 8.94e-61 205
MS.gene069124.t1 AT2G26480 29.828 466 289 15 5 460 8 445 1.20e-60 205
MS.gene069124.t1 AT2G43820 30.561 481 272 16 5 462 7 448 2.12e-60 204
MS.gene069124.t1 AT3G46650 30.655 473 267 13 5 463 10 435 2.94e-60 203
MS.gene069124.t1 AT5G38010 31.557 469 283 13 5 460 10 453 4.06e-60 204
MS.gene069124.t1 AT5G38040 31.887 461 268 15 13 458 18 447 6.18e-60 203
MS.gene069124.t1 AT3G02100 30.271 479 291 10 1 462 9 461 5.15e-59 201
MS.gene069124.t1 AT5G59590 30.335 478 267 16 5 457 10 446 8.89e-59 200
MS.gene069124.t1 AT1G22370 35.762 302 184 6 166 460 7 305 2.73e-58 194
MS.gene069124.t1 AT4G15480 28.481 474 307 10 5 460 19 478 6.27e-58 199
MS.gene069124.t1 AT2G43840 29.512 471 288 14 5 461 7 447 2.31e-57 196
MS.gene069124.t1 AT2G43840 29.536 474 284 15 5 461 7 447 2.38e-57 196
MS.gene069124.t1 AT3G21560 29.545 484 288 19 4 458 11 470 2.40e-56 194
MS.gene069124.t1 AT2G23260 31.197 468 286 18 5 460 10 453 2.69e-54 188
MS.gene069124.t1 AT4G15490 28.542 480 292 17 5 457 8 463 2.90e-53 186
MS.gene069124.t1 AT2G31750 29.079 478 286 16 5 460 8 454 4.38e-52 182
MS.gene069124.t1 AT4G15500 28.392 479 291 14 4 457 8 459 5.22e-52 182
MS.gene069124.t1 AT2G31750 29.253 482 287 17 5 463 8 458 5.23e-52 183
MS.gene069124.t1 AT2G36970 28.395 486 299 16 4 462 9 472 9.51e-52 182
MS.gene069124.t1 AT2G31790 28.205 468 299 15 5 457 8 453 2.86e-51 180
MS.gene069124.t1 AT5G17050 31.680 363 229 9 104 463 113 459 1.04e-50 179
MS.gene069124.t1 AT2G28080 28.409 440 271 13 10 427 23 440 1.76e-50 179
MS.gene069124.t1 AT2G23250 31.330 466 264 19 14 460 7 435 2.93e-50 177
MS.gene069124.t1 AT1G05675 29.764 467 297 9 2 457 3 449 4.18e-50 177
MS.gene069124.t1 AT1G05680 29.707 478 283 15 2 457 3 449 6.79e-50 176
MS.gene069124.t1 AT5G17040 30.220 364 227 9 104 463 102 442 3.01e-49 174
MS.gene069124.t1 AT4G15550 27.510 498 278 17 4 457 12 470 1.33e-48 173
MS.gene069124.t1 AT5G17040 31.803 305 191 7 163 463 49 340 3.63e-48 169
MS.gene069124.t1 AT2G36780 28.074 488 314 15 5 464 14 492 3.46e-47 170
MS.gene069124.t1 AT2G36770 28.543 494 304 18 5 462 14 494 8.96e-47 169
MS.gene069124.t1 AT2G36760 29.839 496 299 19 5 464 14 496 1.11e-46 169
MS.gene069124.t1 AT5G26310 29.615 493 266 20 4 453 6 460 2.98e-46 167
MS.gene069124.t1 AT2G15480 27.495 491 303 14 2 458 7 478 8.66e-46 166
MS.gene069124.t1 AT1G05560 28.252 492 280 19 1 460 1 451 1.44e-45 165
MS.gene069124.t1 AT4G01070 29.158 487 279 17 2 453 5 460 1.52e-45 165
MS.gene069124.t1 AT1G01420 30.462 476 261 18 3 443 6 446 1.71e-45 165
MS.gene069124.t1 AT1G01420 30.462 476 261 18 3 443 9 449 1.90e-45 165
MS.gene069124.t1 AT1G05560 28.252 492 280 19 1 460 51 501 3.29e-45 165
MS.gene069124.t1 AT5G17030 29.248 359 240 7 104 460 109 455 5.94e-45 163
MS.gene069124.t1 AT1G05530 28.112 498 276 19 1 460 1 454 1.18e-44 162
MS.gene069124.t1 AT1G30530 30.495 364 230 10 101 460 106 450 1.89e-44 162
MS.gene069124.t1 AT3G16520 27.158 475 301 15 6 458 6 457 1.89e-44 162
MS.gene069124.t1 AT1G24100 30.000 480 280 17 5 460 11 458 2.58e-44 161
MS.gene069124.t1 AT5G66690 29.814 483 268 18 4 449 6 454 2.91e-44 162
MS.gene069124.t1 AT2G15480 26.747 501 304 14 2 458 7 488 4.68e-44 161
MS.gene069124.t1 AT4G34138 26.844 488 301 14 5 458 11 476 3.06e-43 159
MS.gene069124.t1 AT2G15490 28.049 492 299 16 2 458 4 475 4.52e-43 159
MS.gene069124.t1 AT2G36800 27.439 492 313 17 5 464 12 491 6.62e-43 158
MS.gene069124.t1 AT2G15490 27.879 495 299 16 2 458 4 478 7.12e-43 158
MS.gene069124.t1 AT3G16520 27.133 457 286 15 6 436 6 441 7.69e-43 157
MS.gene069124.t1 AT3G16520 27.137 468 293 16 6 447 6 451 8.26e-43 157
MS.gene069124.t1 AT4G34131 26.931 505 289 18 5 462 10 481 9.37e-43 157
MS.gene069124.t1 AT3G53160 35.018 277 139 8 214 460 217 482 1.30e-42 157
MS.gene069124.t1 AT2G36790 28.106 491 310 17 5 464 13 491 6.25e-41 153
MS.gene069124.t1 AT1G01390 29.647 425 236 13 3 396 6 398 1.07e-40 152
MS.gene069124.t1 AT1G01390 29.647 425 236 13 3 396 23 415 1.11e-40 152
MS.gene069124.t1 AT2G36750 27.866 506 289 19 5 463 10 486 1.20e-40 152
MS.gene069124.t1 AT3G22250 25.546 458 299 15 2 439 5 440 3.51e-40 150
MS.gene069124.t1 AT4G14090 27.044 477 289 17 4 457 12 452 3.03e-39 147
MS.gene069124.t1 AT2G29710 25.410 488 306 12 1 458 1 460 8.42e-39 147
MS.gene069124.t1 AT3G50740 28.252 492 269 20 4 448 6 460 1.06e-38 147
MS.gene069124.t1 AT4G34135 27.126 494 303 12 5 462 11 483 2.16e-38 145
MS.gene069124.t1 AT5G03490 26.243 503 277 18 2 463 16 465 4.18e-38 144
MS.gene069124.t1 AT1G73880 27.629 485 298 17 5 464 14 470 4.56e-37 142
MS.gene069124.t1 AT5G14860 27.308 509 276 21 5 460 8 475 7.93e-37 141
MS.gene069124.t1 AT2G29730 23.577 492 324 14 1 465 1 467 1.25e-36 140
MS.gene069124.t1 AT1G10400 27.778 486 293 22 1 457 3 459 1.31e-36 140
MS.gene069124.t1 AT2G30140 27.215 474 291 17 5 460 13 450 2.29e-36 139
MS.gene069124.t1 AT2G30140 26.793 474 294 16 5 460 13 451 2.83e-36 139
MS.gene069124.t1 AT1G07250 27.743 483 281 21 7 449 7 461 1.25e-34 135
MS.gene069124.t1 AT3G21790 24.597 496 313 16 5 460 4 478 1.32e-34 135
MS.gene069124.t1 AT2G18570 26.824 507 269 24 1 453 1 459 2.57e-34 134
MS.gene069124.t1 AT3G53150 26.602 515 292 18 5 460 22 509 3.56e-33 132
MS.gene069124.t1 AT2G16890 25.364 481 312 15 5 460 9 467 2.89e-32 129
MS.gene069124.t1 AT4G36770 31.439 264 137 8 210 444 199 447 4.79e-32 127
MS.gene069124.t1 AT5G37950 33.094 278 161 8 106 379 81 337 9.14e-32 124
MS.gene069124.t1 AT2G18560 30.741 270 142 9 213 453 116 369 4.03e-31 124
MS.gene069124.t1 AT5G37950 32.616 279 167 9 106 379 81 343 4.48e-31 123
MS.gene069124.t1 AT2G30150 26.875 480 293 20 5 463 13 455 7.90e-31 124
MS.gene069124.t1 AT2G29740 25.820 488 300 17 7 457 9 471 8.75e-31 124
MS.gene069124.t1 AT4G15280 24.848 495 304 17 5 458 4 471 1.63e-30 124
MS.gene069124.t1 AT1G51210 24.561 456 280 14 4 436 19 433 1.71e-30 123
MS.gene069124.t1 AT3G21780 25.647 425 266 13 5 405 4 402 1.86e-30 123
MS.gene069124.t1 AT4G15280 24.848 495 304 17 5 458 36 503 2.43e-30 123
MS.gene069124.t1 AT4G15260 31.136 273 152 8 211 458 91 352 2.63e-30 121
MS.gene069124.t1 AT2G16890 26.379 417 269 13 5 405 9 403 2.70e-30 122
MS.gene069124.t1 AT1G07240 28.797 316 191 11 162 460 177 475 3.45e-30 122
MS.gene069124.t1 AT1G07260 29.658 263 157 8 212 457 217 468 3.86e-30 122
MS.gene069124.t1 AT2G29750 24.380 484 320 14 2 457 5 470 5.08e-30 122
MS.gene069124.t1 AT3G21750 26.471 442 253 16 5 411 4 408 6.24e-30 122
MS.gene069124.t1 AT2G30150 26.737 475 290 20 10 463 2 439 2.40e-29 119
MS.gene069124.t1 AT3G21760 24.424 434 274 11 5 406 4 415 2.72e-29 120
MS.gene069124.t1 AT3G21800 27.123 424 263 16 6 405 5 406 1.56e-28 118
MS.gene069124.t1 AT5G12890 37.895 190 98 7 213 391 224 404 3.40e-27 114
MS.gene069124.t1 AT5G65550 25.481 416 270 11 5 404 9 400 1.22e-26 112
MS.gene069124.t1 AT5G49690 25.684 475 300 17 2 460 7 444 1.36e-26 112
MS.gene069124.t1 AT1G06000 25.466 483 270 19 4 457 9 430 2.25e-26 111
MS.gene069124.t1 AT4G01070 27.879 330 195 11 2 317 5 305 3.04e-21 95.1
MS.gene069124.t1 AT5G54010 24.821 419 258 15 5 405 6 385 5.36e-21 95.5
MS.gene069124.t1 AT4G27560 23.261 417 264 17 5 404 7 384 9.41e-17 82.8
MS.gene069124.t1 AT2G22590 24.515 412 266 15 5 396 15 401 4.61e-16 80.9
MS.gene069124.t1 AT1G64910 24.344 419 260 16 2 405 3 379 8.82e-16 79.7
MS.gene069124.t1 AT4G27570 22.727 418 265 17 5 404 7 384 1.76e-15 79.0
MS.gene069124.t1 AT5G54060 22.059 476 331 11 6 462 14 468 9.14e-15 76.6
MS.gene069124.t1 AT5G53990 32.117 137 88 2 273 405 244 379 1.04e-14 76.6
MS.gene069124.t1 AT4G34135 24.926 337 208 9 5 317 11 326 3.38e-14 73.9
MS.gene069124.t1 AT1G50580 25.598 418 233 19 5 396 6 371 8.13e-14 73.6
MS.gene069124.t1 AT4G09500 25.362 414 254 17 5 404 6 378 2.05e-13 72.4
MS.gene069124.t1 AT2G22930 24.038 416 261 15 3 404 4 378 1.17e-12 70.1
MS.gene069124.t1 AT4G09500 33.846 130 79 4 280 404 226 353 2.44e-12 68.9

Find 95 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5.4:+21735304 MS.gene069124:CDS
TCTATCCACTTTGAAGAAAT+TGG 0.151742 5.4:-21736749 None:intergenic
TTATATACTGAATCAAATTT+TGG 0.160775 5.4:-21737326 None:intergenic
TGCTACTAAAATGGCGGATT+TGG 0.188389 5.4:+21737260 MS.gene069124:CDS
TGGGGAAGTGGAGACGAATT+TGG 0.191985 5.4:-21736654 None:intergenic
AGGCTTACCATACATATTTA+TGG 0.193194 5.4:-21735255 None:intergenic
TTCAAAATCTGCTACTAAAA+TGG 0.254659 5.4:+21737251 MS.gene069124:CDS
CTAACCCAAGCATCACTTAA+AGG 0.264331 5.4:+21736580 MS.gene069124:CDS
ACTGATTTGGCTCATGAGTT+TGG 0.265323 5.4:+21735350 MS.gene069124:CDS
GACGAATTTGGGAGAGAATT+GGG 0.288272 5.4:-21736642 None:intergenic
GAGAACAAATACTTGAGTTT+TGG 0.290736 5.4:+21736851 MS.gene069124:CDS
AAGGAAAAGCATCCTGGATT+TGG 0.312405 5.4:+21735206 MS.gene069124:CDS
CCAAACATGGTACAAGAAAA+AGG 0.313624 5.4:+21736919 MS.gene069124:CDS
GGGGAAGTGGAGACGAATTT+GGG 0.316790 5.4:-21736653 None:intergenic
AAAATTTGATTCAGTATATA+AGG 0.317414 5.4:+21737328 MS.gene069124:CDS
TTTCGGTACATCAAACAAAA+TGG 0.331422 5.4:+21736528 MS.gene069124:CDS
CTGATTTGGCTCATGAGTTT+GGG 0.337441 5.4:+21735351 MS.gene069124:CDS
AGTGCGTAGTATACCTCTAA+TGG 0.342564 5.4:-21735462 None:intergenic
AGACGAATTTGGGAGAGAAT+TGG 0.348002 5.4:-21736643 None:intergenic
GTAAGTGAGGTTTGGAAGCT+TGG 0.358809 5.4:+21737147 MS.gene069124:CDS
GGGCCAATAGTGTAGAGTTT+GGG 0.365185 5.4:-21736673 None:intergenic
CTGATCAACCACTTAATAGT+AGG 0.368297 5.4:+21737121 MS.gene069124:CDS
CATTGCCTTTAAGTGATGCT+TGG 0.369928 5.4:-21736585 None:intergenic
AAACTTTATCTAAAACGATA+TGG 0.371646 5.4:-21736552 None:intergenic
GAATATGGTGAATGATATTA+TGG 0.374024 5.4:+21737209 MS.gene069124:CDS
TTTCTGTATGCCCAAGCTCT+TGG 0.375016 5.4:+21735424 MS.gene069124:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5.4:+21737088 MS.gene069124:CDS
TCAGTTGTATATGTTAGTTT+TGG 0.386729 5.4:+21736808 MS.gene069124:CDS
CAAAATAAGGAAAAGCATCC+TGG 0.395550 5.4:+21735200 MS.gene069124:CDS
GAGAGGTTTGATTGTGGAGT+GGG 0.400334 5.4:+21736978 MS.gene069124:CDS
TGGGCCAATAGTGTAGAGTT+TGG 0.401252 5.4:-21736674 None:intergenic
TGGTGACCTTGCTACTGATT+TGG 0.401952 5.4:+21735337 MS.gene069124:CDS
TAGGAATGTTGTTGAGAATA+TGG 0.403651 5.4:+21737194 MS.gene069124:CDS
ATTGCCTTTAAGTGATGCTT+GGG 0.413731 5.4:-21736584 None:intergenic
TAGTGTAGAGTTTGGGGAAG+TGG 0.414276 5.4:-21736666 None:intergenic
TTCCCCAAACTCTACACTAT+TGG 0.415394 5.4:+21736670 MS.gene069124:CDS
ATGGTCTTGAATTGAAGCTT+AGG 0.425350 5.4:-21735167 None:intergenic
CTCGTTGCACTCCAAGAGCT+TGG 0.425822 5.4:-21735435 None:intergenic
TGAGGTTTGGAAGCTTGGAT+TGG 0.438209 5.4:+21737152 MS.gene069124:CDS
GTAGGTTTGTAAGTGAGGTT+TGG 0.440134 5.4:+21737139 MS.gene069124:CDS
CTTACAAACCTACTATTAAG+TGG 0.443768 5.4:-21737129 None:intergenic
AAATAAGGCCAACAAATCAT+AGG 0.459700 5.4:-21737096 None:intergenic
ACGAATTTGGGAGAGAATTG+GGG 0.461848 5.4:-21736641 None:intergenic
GCTTGAGCATTGTGTTTACA+TGG 0.467581 5.4:-21735031 None:intergenic
CAACTCCAATTTCTTCAAAG+TGG 0.471156 5.4:+21736744 MS.gene069124:CDS
TGTAGAGATCTTCCACGTTT+CGG 0.471834 5.4:+21736511 MS.gene069124:CDS
GTGCGTAGTATACCTCTAAT+GGG 0.477570 5.4:-21735461 None:intergenic
TGCAACGAGATTCCCATTAG+AGG 0.478288 5.4:+21735449 MS.gene069124:CDS
GTGTTTACATGGCCTTGTGC+TGG 0.482580 5.4:-21735020 None:intergenic
TAAGGAGAGAGGTTTGATTG+TGG 0.483641 5.4:+21736972 MS.gene069124:CDS
CTGTTGCTGCTAGTAGCGTC+TGG 0.486057 5.4:+21735396 MS.gene069124:CDS
ATTACCTCCATAAATATGTA+TGG 0.488296 5.4:+21735248 MS.gene069124:CDS
ACTTGAGGAAAAGACTAGTA+AGG 0.494052 5.4:+21736954 MS.gene069124:CDS
TCGTTGCACTCCAAGAGCTT+GGG 0.495331 5.4:-21735434 None:intergenic
TGGTCTTGAATTGAAGCTTA+GGG 0.509318 5.4:-21735166 None:intergenic
ACATGGCCTTGTGCTGGACA+TGG 0.511830 5.4:-21735014 None:intergenic
ACTTTGGAGAGTGTGGTTTG+TGG 0.513568 5.4:+21737069 MS.gene069124:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5.4:+21737175 MS.gene069124:CDS
ACAATAATATCTCTCAAAGA+AGG 0.522945 5.4:-21735275 None:intergenic
ATTTATAGGCGACGAGGACA+TGG 0.524524 5.4:+21736444 MS.gene069124:intron
TAGTGGATGGAATTCTACTT+TGG 0.524583 5.4:+21737053 MS.gene069124:CDS
TTGTTCTCTTGTCATTGTTG+TGG 0.527140 5.4:-21736836 None:intergenic
AGAGAGGTTTGATTGTGGAG+TGG 0.527185 5.4:+21736977 MS.gene069124:CDS
GAAAAGACTAGTAAGGAGAG+AGG 0.530175 5.4:+21736961 MS.gene069124:CDS
TAATAGTAGGTTTGTAAGTG+AGG 0.531816 5.4:+21737134 MS.gene069124:CDS
TTAAACTATTGAGTCTGTTG+TGG 0.536429 5.4:-21735112 None:intergenic
AGATTCGAGCCATGTCATGC+AGG 0.543292 5.4:-21736773 None:intergenic
AATAAGAAACGTGCCAGACA+TGG 0.547894 5.4:+21736474 MS.gene069124:CDS
TGATATTATGGTGAACAAGA+AGG 0.549365 5.4:+21737221 MS.gene069124:CDS
GTATTGAGGTGGTGGTGAAG+TGG 0.552097 5.4:-21736694 None:intergenic
CAAGCATCACTTAAAGGCAA+TGG 0.555557 5.4:+21736586 MS.gene069124:CDS
GTTGTTGTAGGAGGAACCAT+CGG 0.556378 5.4:-21737301 None:intergenic
ACCATCGGGACTTACACTCT+TGG 0.558630 5.4:-21737286 None:intergenic
GAATTCTACTTTGGAGAGTG+TGG 0.566333 5.4:+21737062 MS.gene069124:CDS
TTGTTGTAGGAGGAACCATC+GGG 0.572977 5.4:-21737300 None:intergenic
AGGACTAATAAAAGAACTTG+AGG 0.581885 5.4:+21736939 MS.gene069124:CDS
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5.4:-21735013 None:intergenic
TATTGAGGTGGTGGTGAAGT+GGG 0.589759 5.4:-21736693 None:intergenic
TGGATAGAACCTGCATGACA+TGG 0.591199 5.4:+21736764 MS.gene069124:CDS
TGTGGAGTGGGTTCCACAAG+AGG 0.592500 5.4:+21736990 MS.gene069124:CDS
TCCAAGAGTGTAAGTCCCGA+TGG 0.595995 5.4:+21737285 MS.gene069124:CDS
ATCTTCCCATGTCCAGCACA+AGG 0.602792 5.4:+21735008 MS.gene069124:CDS
GGAGTGGGTTCCACAAGAGG+AGG 0.608195 5.4:+21736993 MS.gene069124:CDS
TGTGACAAAACCTCCTCTTG+TGG 0.614832 5.4:-21737003 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.621309 5.4:-21736672 None:intergenic
ACATATACAACTGACTTCAA+CGG 0.624862 5.4:-21736799 None:intergenic
CTTACCATACATATTTATGG+AGG 0.631004 5.4:-21735252 None:intergenic
AAAATCTGCTACTAAAATGG+CGG 0.633747 5.4:+21737254 MS.gene069124:CDS
CATGAGCCAAATCAGTAGCA+AGG 0.637420 5.4:-21735343 None:intergenic
TATTATGGTGAACAAGAAGG+AGG 0.639898 5.4:+21737224 MS.gene069124:CDS
TTGTTTGATGTACCGAAACG+TGG 0.645855 5.4:-21736523 None:intergenic
GTGGGTGATTAGACCAAACA+TGG 0.685305 5.4:+21736906 MS.gene069124:CDS
TGTTTAATTTATAGGCGACG+AGG 0.686500 5.4:+21736438 MS.gene069124:intron
TGTGGATGTACTCAGTGTTG+AGG 0.705748 5.4:-21735094 None:intergenic
CATGGGAAGATTAACACATG+TGG 0.740669 5.4:-21734996 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAATCAAGAAATT+AGG - chr5.4:21735541-21735560 None:intergenic 10.0%
!! AGATAAGTTTAAATAAAATA+AGG - chr5.4:21736103-21736122 None:intergenic 10.0%
!! ATAATTAAATCAAGAAATTA+GGG - chr5.4:21735540-21735559 None:intergenic 10.0%
!! ATTAAGTAAAAAAAATTGAA+AGG - chr5.4:21736329-21736348 None:intergenic 10.0%
!!! AACTTATCTTTTATTTTATT+AGG + chr5.4:21736114-21736133 MS.gene069124:intron 10.0%
!! AAAATTTGATTCAGTATATA+AGG + chr5.4:21737328-21737347 MS.gene069124:CDS 15.0%
!! ACTACATAAATTATATAGTT+TGG - chr5.4:21735578-21735597 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG - chr5.4:21735539-21735558 None:intergenic 15.0%
!! TTAATTATTATACATATGCA+AGG + chr5.4:21735552-21735571 MS.gene069124:intron 15.0%
!!! CTTATGTATGTTTTATATTT+TGG - chr5.4:21736228-21736247 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5.4:21737329-21737348 None:intergenic 15.0%
!! TAAATAAAATAAGGCATATG+TGG - chr5.4:21736094-21736113 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG - chr5.4:21736555-21736574 None:intergenic 20.0%
!!! GAAAATAAGTTGCATTATTT+TGG + chr5.4:21735304-21735323 MS.gene069124:CDS 20.0%
!!! GTTTTGGTTGTTTAATTTAT+AGG + chr5.4:21736430-21736449 MS.gene069124:intron 20.0%
! AAGACTTTGTAAAAGAGATT+GGG + chr5.4:21735978-21735997 MS.gene069124:intron 25.0%
! ACAATAATATCTCTCAAAGA+AGG - chr5.4:21735278-21735297 None:intergenic 25.0%
! AGCTTATTGAATTATGACAT+AGG - chr5.4:21736043-21736062 None:intergenic 25.0%
! ATATGAAAGATGTTTGTGAT+AGG + chr5.4:21737175-21737194 MS.gene069124:CDS 25.0%
! ATCTTGGGAAAATACTTAAT+TGG + chr5.4:21735722-21735741 MS.gene069124:intron 25.0%
! ATTACCTCCATAAATATGTA+TGG + chr5.4:21735248-21735267 MS.gene069124:CDS 25.0%
! GAATATGGTGAATGATATTA+TGG + chr5.4:21737209-21737228 MS.gene069124:CDS 25.0%
! TAAGACTTTGTAAAAGAGAT+TGG + chr5.4:21735977-21735996 MS.gene069124:intron 25.0%
! TTCAAAATCTGCTACTAAAA+TGG + chr5.4:21737251-21737270 MS.gene069124:CDS 25.0%
!! AATGAGTTATATGTGTGTTT+TGG + chr5.4:21736414-21736433 MS.gene069124:intron 25.0%
!! ATGAAATATACTTTTGTGTG+TGG + chr5.4:21735844-21735863 MS.gene069124:intron 25.0%
!! CATCTCTGATTTTCAAAATA+AGG + chr5.4:21735187-21735206 MS.gene069124:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5.4:21737326-21737345 None:intergenic 25.0%
!! TGAAATATACTTTTGTGTGT+GGG + chr5.4:21735845-21735864 MS.gene069124:intron 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG + chr5.4:21735308-21735327 MS.gene069124:CDS 25.0%
!!! CTTATTTTGAAAATCAGAGA+TGG - chr5.4:21735189-21735208 None:intergenic 25.0%
!!! GTTTTATCTAATAAAAGCGT+AGG + chr5.4:21736247-21736266 MS.gene069124:intron 25.0%
!!! TCAGTTGTATATGTTAGTTT+TGG + chr5.4:21736808-21736827 MS.gene069124:CDS 25.0%
!!! TGATGATGTTGTTTTTTTCA+TGG - chr5.4:21736719-21736738 None:intergenic 25.0%
!!! TTGTTTTTTTCATGGTATTG+AGG - chr5.4:21736711-21736730 None:intergenic 25.0%
AAAATCTGCTACTAAAATGG+CGG + chr5.4:21737254-21737273 MS.gene069124:CDS 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5.4:21737099-21737118 None:intergenic 30.0%
AATGTTATAGACGAACATCT+TGG + chr5.4:21735706-21735725 MS.gene069124:intron 30.0%
ACAGCAAAAAAACATTCTTG+TGG + chr5.4:21736887-21736906 MS.gene069124:CDS 30.0%
AGGACTAATAAAAGAACTTG+AGG + chr5.4:21736939-21736958 MS.gene069124:CDS 30.0%
AGGCTTACCATACATATTTA+TGG - chr5.4:21735258-21735277 None:intergenic 30.0%
AGTGGTTGATCAGAAAAATA+AGG - chr5.4:21737114-21737133 None:intergenic 30.0%
ATGTTATAGACGAACATCTT+GGG + chr5.4:21735707-21735726 MS.gene069124:intron 30.0%
CAGCAAAAAAACATTCTTGT+GGG + chr5.4:21736888-21736907 MS.gene069124:CDS 30.0%
CATACCACAATTCAAAACTT+TGG + chr5.4:21736369-21736388 MS.gene069124:intron 30.0%
CTTACAAACCTACTATTAAG+TGG - chr5.4:21737132-21737151 None:intergenic 30.0%
CTTACCATACATATTTATGG+AGG - chr5.4:21735255-21735274 None:intergenic 30.0%
TAATAGTAGGTTTGTAAGTG+AGG + chr5.4:21737134-21737153 MS.gene069124:CDS 30.0%
TAGGAATGTTGTTGAGAATA+TGG + chr5.4:21737194-21737213 MS.gene069124:CDS 30.0%
TGATATTATGGTGAACAAGA+AGG + chr5.4:21737221-21737240 MS.gene069124:CDS 30.0%
TTAAACTATTGAGTCTGTTG+TGG - chr5.4:21735115-21735134 None:intergenic 30.0%
TTTCGGTACATCAAACAAAA+TGG + chr5.4:21736528-21736547 MS.gene069124:CDS 30.0%
! ACATATACAACTGACTTCAA+CGG - chr5.4:21736802-21736821 None:intergenic 30.0%
! GAGAACAAATACTTGAGTTT+TGG + chr5.4:21736851-21736870 MS.gene069124:CDS 30.0%
! TCTACTGTTCTTAGAGTTTT+TGG + chr5.4:21735597-21735616 MS.gene069124:intron 30.0%
! TCTATCCACTTTGAAGAAAT+TGG - chr5.4:21736752-21736771 None:intergenic 30.0%
!!! ACTACCAAAGTTTTGAATTG+TGG - chr5.4:21736376-21736395 None:intergenic 30.0%
!!! ATTATTTTGGATGGAGGTTT+TGG + chr5.4:21735317-21735336 MS.gene069124:CDS 30.0%
!!! TTTTTTTCATGGTATTGAGG+TGG - chr5.4:21736708-21736727 None:intergenic 30.0%
ACTTGAGGAAAAGACTAGTA+AGG + chr5.4:21736954-21736973 MS.gene069124:CDS 35.0%
ATTGCCTTTAAGTGATGCTT+GGG - chr5.4:21736587-21736606 None:intergenic 35.0%
CAACTCCAATTTCTTCAAAG+TGG + chr5.4:21736744-21736763 MS.gene069124:CDS 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5.4:21736919-21736938 MS.gene069124:CDS 35.0%
CTCACTCTAAGCAATTTATG+TGG + chr5.4:21736174-21736193 MS.gene069124:intron 35.0%
CTGATCAACCACTTAATAGT+AGG + chr5.4:21737121-21737140 MS.gene069124:CDS 35.0%
TACGTTAGATCTGTTTGGAT+TGG + chr5.4:21735925-21735944 MS.gene069124:intron 35.0%
TATTATGGTGAACAAGAAGG+AGG + chr5.4:21737224-21737243 MS.gene069124:CDS 35.0%
TCTTGTACGTTAGATCTGTT+TGG + chr5.4:21735920-21735939 MS.gene069124:intron 35.0%
TTGTTCTCTTGTCATTGTTG+TGG - chr5.4:21736839-21736858 None:intergenic 35.0%
! ACAATGTTTTCTCCAAATCC+AGG - chr5.4:21735221-21735240 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG - chr5.4:21735170-21735189 None:intergenic 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5.4:21736922-21736941 None:intergenic 35.0%
! CGAATTATGTTTTCCATGTC+TGG - chr5.4:21736490-21736509 None:intergenic 35.0%
! TAGTGGATGGAATTCTACTT+TGG + chr5.4:21737053-21737072 MS.gene069124:CDS 35.0%
! TGGTCTTGAATTGAAGCTTA+GGG - chr5.4:21735169-21735188 None:intergenic 35.0%
! TGTTTAATTTATAGGCGACG+AGG + chr5.4:21736438-21736457 MS.gene069124:intron 35.0%
!! CAAAATAAGGAAAAGCATCC+TGG + chr5.4:21735200-21735219 MS.gene069124:CDS 35.0%
!! CAAATACTTGAGTTTTGGCA+CGG + chr5.4:21736856-21736875 MS.gene069124:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5.4:21737316-21737335 None:intergenic 35.0%
!!! AGTTGCATTATTTTGGATGG+AGG + chr5.4:21735311-21735330 MS.gene069124:CDS 35.0%
!!! CTTTTTTGACACATAGTGGA+TGG + chr5.4:21737040-21737059 MS.gene069124:CDS 35.0%
AATAAGAAACGTGCCAGACA+TGG + chr5.4:21736474-21736493 MS.gene069124:CDS 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5.4:21736644-21736663 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5.4:21736646-21736665 None:intergenic 40.0%
AGTGCGTAGTATACCTCTAA+TGG - chr5.4:21735465-21735484 None:intergenic 40.0%
CAAGCATCACTTAAAGGCAA+TGG + chr5.4:21736586-21736605 MS.gene069124:CDS 40.0%
CATGGGAAGATTAACACATG+TGG - chr5.4:21734999-21735018 None:intergenic 40.0%
CATTGCCTTTAAGTGATGCT+TGG - chr5.4:21736588-21736607 None:intergenic 40.0%
CTAACCCAAGCATCACTTAA+AGG + chr5.4:21736580-21736599 MS.gene069124:CDS 40.0%
GAAAAGACTAGTAAGGAGAG+AGG + chr5.4:21736961-21736980 MS.gene069124:CDS 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5.4:21736645-21736664 None:intergenic 40.0%
GGCATATGTGGAATGAGAAA+AGG - chr5.4:21736082-21736101 None:intergenic 40.0%
GTAGGTTTGTAAGTGAGGTT+TGG + chr5.4:21737139-21737158 MS.gene069124:CDS 40.0%
GTGCGTAGTATACCTCTAAT+GGG - chr5.4:21735464-21735483 None:intergenic 40.0%
TAAGGAGAGAGGTTTGATTG+TGG + chr5.4:21736972-21736991 MS.gene069124:CDS 40.0%
TGTAGAGATCTTCCACGTTT+CGG + chr5.4:21736511-21736530 MS.gene069124:CDS 40.0%
TTCCCCAAACTCTACACTAT+TGG + chr5.4:21736670-21736689 MS.gene069124:CDS 40.0%
TTGTTTGATGTACCGAAACG+TGG - chr5.4:21736526-21736545 None:intergenic 40.0%
! GAATTCTACTTTGGAGAGTG+TGG + chr5.4:21737062-21737081 MS.gene069124:CDS 40.0%
! GCTTGAGCATTGTGTTTACA+TGG - chr5.4:21735034-21735053 None:intergenic 40.0%
! GTTTTGTCACACAAGGCAAT+TGG + chr5.4:21737015-21737034 MS.gene069124:CDS 40.0%
!! AAGGAAAAGCATCCTGGATT+TGG + chr5.4:21735206-21735225 MS.gene069124:CDS 40.0%
!! ACTGATTTGGCTCATGAGTT+TGG + chr5.4:21735350-21735369 MS.gene069124:CDS 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5.4:21737313-21737332 None:intergenic 40.0%
!! CTGATTTGGCTCATGAGTTT+GGG + chr5.4:21735351-21735370 MS.gene069124:CDS 40.0%
!! TGCTACTAAAATGGCGGATT+TGG + chr5.4:21737260-21737279 MS.gene069124:CDS 40.0%
!! TTTTCATGGTATTGAGGTGG+TGG - chr5.4:21736705-21736724 None:intergenic 40.0%
!!! GGTGCTTTTTTGACACATAG+TGG + chr5.4:21737036-21737055 MS.gene069124:CDS 40.0%
AGAGAGGTTTGATTGTGGAG+TGG + chr5.4:21736977-21736996 MS.gene069124:CDS 45.0%
ATGAGAAAAGGCAAAGCTCG+CGG - chr5.4:21736070-21736089 None:intergenic 45.0%
ATTTATAGGCGACGAGGACA+TGG + chr5.4:21736444-21736463 MS.gene069124:intron 45.0%
CATGAGCCAAATCAGTAGCA+AGG - chr5.4:21735346-21735365 None:intergenic 45.0%
GAGAGGTTTGATTGTGGAGT+GGG + chr5.4:21736978-21736997 MS.gene069124:CDS 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5.4:21736675-21736694 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5.4:21736676-21736695 None:intergenic 45.0%
GTAAGTGAGGTTTGGAAGCT+TGG + chr5.4:21737147-21737166 MS.gene069124:CDS 45.0%
GTGGGTGATTAGACCAAACA+TGG + chr5.4:21736906-21736925 MS.gene069124:CDS 45.0%
GTTGTTGTAGGAGGAACCAT+CGG - chr5.4:21737304-21737323 None:intergenic 45.0%
TAGTGTAGAGTTTGGGGAAG+TGG - chr5.4:21736669-21736688 None:intergenic 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG + chr5.4:21737152-21737171 MS.gene069124:CDS 45.0%
TGCAACGAGATTCCCATTAG+AGG + chr5.4:21735449-21735468 MS.gene069124:CDS 45.0%
TGGATAGAACCTGCATGACA+TGG + chr5.4:21736764-21736783 MS.gene069124:CDS 45.0%
TGGGCCAATAGTGTAGAGTT+TGG - chr5.4:21736677-21736696 None:intergenic 45.0%
TGTGACAAAACCTCCTCTTG+TGG - chr5.4:21737006-21737025 None:intergenic 45.0%
TGTGGATGTACTCAGTGTTG+AGG - chr5.4:21735097-21735116 None:intergenic 45.0%
TTGTTGTAGGAGGAACCATC+GGG - chr5.4:21737303-21737322 None:intergenic 45.0%
TTTCTGTATGCCCAAGCTCT+TGG + chr5.4:21735424-21735443 MS.gene069124:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5.4:21737069-21737088 MS.gene069124:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5.4:21737088-21737107 MS.gene069124:CDS 45.0%
! TATTGAGGTGGTGGTGAAGT+GGG - chr5.4:21736696-21736715 None:intergenic 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5.4:21735337-21735356 MS.gene069124:CDS 45.0%
!! AGAGGAGGTTTTGTCACACA+AGG + chr5.4:21737008-21737027 MS.gene069124:CDS 45.0%
!! TGGATTGGCTTAGCTTACGT+GGG + chr5.4:21735940-21735959 MS.gene069124:intron 45.0%
!! TTGGATTGGCTTAGCTTACG+TGG + chr5.4:21735939-21735958 MS.gene069124:intron 45.0%
ACCATCGGGACTTACACTCT+TGG - chr5.4:21737289-21737308 None:intergenic 50.0%
AGATTCGAGCCATGTCATGC+AGG - chr5.4:21736776-21736795 None:intergenic 50.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5.4:21735008-21735027 MS.gene069124:CDS 50.0%
GGGGAAGTGGAGACGAATTT+GGG - chr5.4:21736656-21736675 None:intergenic 50.0%
TCGTTGCACTCCAAGAGCTT+GGG - chr5.4:21735437-21735456 None:intergenic 50.0%
TGGGGAAGTGGAGACGAATT+TGG - chr5.4:21736657-21736676 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+TGG - chr5.4:21736697-21736716 None:intergenic 50.0%
! TCCAAGAGTGTAAGTCCCGA+TGG + chr5.4:21737285-21737304 MS.gene069124:CDS 50.0%
!! GTGTTTACATGGCCTTGTGC+TGG - chr5.4:21735023-21735042 None:intergenic 50.0%
AGAAAAGGCAAAGCTCGCGG+TGG - chr5.4:21736067-21736086 None:intergenic 55.0%
CTCGTTGCACTCCAAGAGCT+TGG - chr5.4:21735438-21735457 None:intergenic 55.0%
CTGTTGCTGCTAGTAGCGTC+TGG + chr5.4:21735396-21735415 MS.gene069124:CDS 55.0%
GAAAAGGCAAAGCTCGCGGT+GGG - chr5.4:21736066-21736085 None:intergenic 55.0%
! TGTGGAGTGGGTTCCACAAG+AGG + chr5.4:21736990-21737009 MS.gene069124:CDS 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5.4:21735017-21735036 None:intergenic 55.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5.4:21735016-21735035 None:intergenic 55.0%
! GGAGTGGGTTCCACAAGAGG+AGG + chr5.4:21736993-21737012 MS.gene069124:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 21734987 21737365 21734987 ID=MS.gene069124
chr5.4 mRNA 21734987 21737365 21734987 ID=MS.gene069124.t1;Parent=MS.gene069124
chr5.4 exon 21734987 21735470 21734987 ID=MS.gene069124.t1.exon1;Parent=MS.gene069124.t1
chr5.4 CDS 21734987 21735470 21734987 ID=cds.MS.gene069124.t1;Parent=MS.gene069124.t1
chr5.4 exon 21736452 21737365 21736452 ID=MS.gene069124.t1.exon2;Parent=MS.gene069124.t1
chr5.4 CDS 21736452 21737365 21736452 ID=cds.MS.gene069124.t1;Parent=MS.gene069124.t1
Gene Sequence

>MS.gene069124

ATGGAAACACCACATGTGTTAATCTTCCCATGTCCAGCACAAGGCCATGTAAACACAATGCTCAAGCTTGCTGAACTTCTTTTAATTCAAAATCTTCACATAACTTTCCTCAACACTGAGTACATCCACAACAGACTCAATAGTTTAAATGATGATGTTAAATCAATTTCACAATGTTACCCTAAGCTTCAATTCAAGACCATCTCTGATTTTCAAAATAAGGAAAAGCATCCTGGATTTGGAGAAAACATTGTAGATATAATTACCTCCATAAATATGTATGGTAAGCCTTCTTTGAGAGATATTATTGTCTCTGAGAAAATAAGTTGCATTATTTTGGATGGAGGTTTTGGTGACCTTGCTACTGATTTGGCTCATGAGTTTGGGATACAATTGATTCATTTTCGTACTGTTGCTGCTAGTAGCGTCTGGATTTATTTCTGTATGCCCAAGCTCTTGGAGTGCAACGAGATTCCCATTAGAGGTATACTACGCACTCTGAAACTGCTCTTAGAATTTTAATTATAATTTTTTTCTTCTTTTTAATTTCCCCTAATTTCTTGATTTAATTATTATACATATGCAAGGCCAAACTATATAATTTATGTAGTCTACTGTTCTTAGAGTTTTTGGCTTATTTTGATACACATTGCACATAATGAATATGAAACACTTCTAAAGTACATTGCACATAATGAATGTAAAACACTTCTAAAGTGAATGTTATAGACGAACATCTTGGGAAAATACTTAATTGGACACAAAAGTTTGAACACTAATTTTGAGTACACGTACATAATTGAAAAAAATGTAGAGAGAGAAAATAATTAAATTGTATTTCTTTTTTAAATAATTAAATGAAATATACTTTTGTGTGTGGGTGTCTAAGTGATGTGTTTAAAAGCTTGTGCTCAAACAAGTCTTTCTTGAACATCTTGTACGTTAGATCTGTTTGGATTGGCTTAGCTTACGTGGGCTTATATACTATCATAAGACTTTGTAAAAGAGATTGGGTAAATCAATAAATACAGCTTAATACAATTTCATAAGCTGCCTATGTCATAATTCAATAAGCTCCCACCGCGAGCTTTGCCTTTTCTCATTCCACATATGCCTTATTTTATTTAAACTTATCTTTTATTTTATTAGGAATTTTAGAAACACTCTTTTTAACATTTTCTCTAATACTCACTCTAAGCAATTTATGTGGTTCTCACTACTTTATGTGAGATCTATTTCCAAAATATAAAACATACATAAGTTTTATCTAATAAAAGCGTAGGTATTTAAGAGAGTGTTCACAACAGATTGTTAGCTAGCGCTCATCTTATTTTATACACCTTTCAATTTTTTTTACTTAATAAACTTATCTACTACTATTACATACCACAATTCAAAACTTTGGTAGTTCGTATATTTATGCAAATAATGAGTTATATGTGTGTTTTGGTTGTTTAATTTATAGGCGACGAGGACATGGATCGCATAATAAGAAACGTGCCAGACATGGAAAACATAATTCGATGTAGAGATCTTCCACGTTTCGGTACATCAAACAAAATGGACCATATCGTTTTAGATAAAGTTTTACAACTAACCCAAGCATCACTTAAAGGCAATGGAGTAATACTCAACACATTTGAAGATCTAGAATCCCCAATTCTCTCCCAAATTCGTCTCCACTTCCCCAAACTCTACACTATTGGCCCACTTCACCACCACCTCAATACCATGAAAAAAACAACATCATCATCTTTCAACTCCAATTTCTTCAAAGTGGATAGAACCTGCATGACATGGCTCGAATCTCAACCGTTGAAGTCAGTTGTATATGTTAGTTTTGGAAGCACCACAACAATGACAAGAGAACAAATACTTGAGTTTTGGCACGGTTTGTTGAACAGCAAAAAAACATTCTTGTGGGTGATTAGACCAAACATGGTACAAGAAAAAGGACTAATAAAAGAACTTGAGGAAAAGACTAGTAAGGAGAGAGGTTTGATTGTGGAGTGGGTTCCACAAGAGGAGGTTTTGTCACACAAGGCAATTGGTGCTTTTTTGACACATAGTGGATGGAATTCTACTTTGGAGAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTTCTGATCAACCACTTAATAGTAGGTTTGTAAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAATGTTGTTGAGAATATGGTGAATGATATTATGGTGAACAAGAAGGAGGAGTATTCAAAATCTGCTACTAAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCCGATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTATTAGCCCATAA

Protein sequence

>MS.gene069124.t1

METPHVLIFPCPAQGHVNTMLKLAELLLIQNLHITFLNTEYIHNRLNSLNDDVKSISQCYPKLQFKTISDFQNKEKHPGFGENIVDIITSINMYGKPSLRDIIVSEKISCIILDGGFGDLATDLAHEFGIQLIHFRTVAASSVWIYFCMPKLLECNEIPIRGDEDMDRIIRNVPDMENIIRCRDLPRFGTSNKMDHIVLDKVLQLTQASLKGNGVILNTFEDLESPILSQIRLHFPKLYTIGPLHHHLNTMKKTTSSSFNSNFFKVDRTCMTWLESQPLKSVVYVSFGSTTTMTREQILEFWHGLLNSKKTFLWVIRPNMVQEKGLIKELEEKTSKERGLIVEWVPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFSDQPLNSRFVSEVWKLGLDMKDVCDRNVVENMVNDIMVNKKEEYSKSATKMADLASKSVSPDGSSYNNLQNLIQYIRSISP