Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32444.t1 | XP_013465670.1 | 96.7 | 423 | 14 | 0 | 1 | 423 | 1 | 423 | 1.00E-239 | 839 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32444.t1 | Q8LPI7 | 59.8 | 415 | 147 | 3 | 1 | 407 | 1 | 403 | 1.7e-139 | 497.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32444.t1 | A0A072VDN0 | 96.7 | 423 | 14 | 0 | 1 | 423 | 1 | 423 | 7.2e-240 | 839.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene32444 | -0.819426 | 1.17E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene32444 | -0.81109 | 8.33E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene32444 | 0.851128 | 1.09E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene32444 | -0.810805 | 9.60E-51 | -1.69E-46 |
| MS.gene049313 | MS.gene32444 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene32444 | -0.841294 | 5.19E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene32444 | -0.800771 | 1.23E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene32444 | -0.828249 | 9.99E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene32444 | -0.824872 | 6.38E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene32444 | -0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene32444 | 0.813918 | 2.01E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene32444 | -0.846849 | 1.68E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene32444 | -0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene32444 | -0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene32444 | -0.82542 | 4.73E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene32444 | -0.844637 | 6.68E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene32444 | -0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene32444 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene32444 | -0.820104 | 8.18E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene32444 | 0.8246 | 7.39E-54 | -1.69E-46 |
| MS.gene051364 | MS.gene32444 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene051366 | MS.gene32444 | 0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene32444 | -0.811035 | 8.56E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene32444 | -0.832411 | 9.60E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene32444 | -0.831038 | 2.09E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene32444 | 0.817625 | 2.99E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene32444 | 0.805124 | 1.55E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene32444 | 0.802314 | 5.95E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene32444 | -0.801168 | 1.02E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene32444 | -0.828727 | 7.66E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene32444 | 0.809901 | 1.50E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene32444 | -0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene054959 | MS.gene32444 | 0.827468 | 1.54E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene32444 | 0.81662 | 5.03E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene32444 | -0.853791 | 1.89E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene32444 | -0.830184 | 3.39E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene32444 | -0.826523 | 2.59E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene32444 | -0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene32444 | -0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene32444 | 0.824357 | 8.43E-54 | -1.69E-46 |
| MS.gene056610 | MS.gene32444 | -0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene32444 | -0.82027 | 7.49E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene32444 | -0.809809 | 1.57E-50 | -1.69E-46 |
| MS.gene056761 | MS.gene32444 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene32444 | -0.833635 | 4.76E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene32444 | -0.822638 | 2.13E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene32444 | -0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene32444 | -0.86498 | 8.23E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene32444 | -0.811475 | 6.87E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene32444 | -0.848888 | 4.60E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene32444 | -0.824271 | 8.84E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene32444 | -0.80432 | 2.29E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene32444 | 0.804068 | 2.58E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene32444 | -0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene32444 | -0.841477 | 4.64E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene32444 | -0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene32444 | -0.813297 | 2.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32444.t1 | MTR_1g004990 | 96.690 | 423 | 14 | 0 | 1 | 423 | 1 | 423 | 0.0 | 852 |
| MS.gene32444.t1 | MTR_3g110180 | 62.617 | 428 | 153 | 2 | 1 | 421 | 1 | 428 | 0.0 | 534 |
| MS.gene32444.t1 | MTR_3g110180 | 62.617 | 428 | 152 | 3 | 1 | 421 | 1 | 427 | 0.0 | 530 |
| MS.gene32444.t1 | MTR_6g087070 | 72.000 | 325 | 88 | 2 | 1 | 323 | 1 | 324 | 1.47e-177 | 502 |
| MS.gene32444.t1 | MTR_8g102930 | 59.953 | 427 | 160 | 5 | 1 | 421 | 1 | 422 | 2.53e-177 | 501 |
| MS.gene32444.t1 | MTR_4g126010 | 66.869 | 329 | 106 | 1 | 1 | 326 | 1 | 329 | 8.37e-166 | 473 |
| MS.gene32444.t1 | MTR_2g099670 | 67.081 | 322 | 106 | 0 | 1 | 322 | 1 | 322 | 8.52e-165 | 472 |
| MS.gene32444.t1 | MTR_1g042280 | 65.766 | 333 | 109 | 1 | 1 | 333 | 2 | 329 | 6.13e-164 | 469 |
| MS.gene32444.t1 | MTR_2g039930 | 68.285 | 309 | 98 | 0 | 1 | 309 | 1 | 309 | 1.58e-163 | 468 |
| MS.gene32444.t1 | MTR_1g069720 | 70.169 | 295 | 88 | 0 | 1 | 295 | 1 | 295 | 4.02e-162 | 464 |
| MS.gene32444.t1 | MTR_1g075870 | 64.526 | 327 | 111 | 1 | 1 | 327 | 2 | 323 | 2.00e-161 | 457 |
| MS.gene32444.t1 | MTR_1g075870 | 64.526 | 327 | 111 | 1 | 1 | 327 | 2 | 323 | 7.41e-161 | 461 |
| MS.gene32444.t1 | MTR_8g018310 | 65.831 | 319 | 108 | 1 | 1 | 319 | 1 | 318 | 1.22e-159 | 459 |
| MS.gene32444.t1 | MTR_8g018310 | 65.831 | 319 | 108 | 1 | 1 | 319 | 1 | 318 | 1.85e-158 | 453 |
| MS.gene32444.t1 | MTR_7g097160 | 68.121 | 298 | 95 | 0 | 1 | 298 | 1 | 298 | 8.85e-158 | 453 |
| MS.gene32444.t1 | MTR_1g042280 | 67.014 | 288 | 90 | 1 | 40 | 327 | 9 | 291 | 4.44e-144 | 413 |
| MS.gene32444.t1 | MTR_0492s0030 | 61.661 | 313 | 118 | 1 | 1 | 311 | 1 | 313 | 1.37e-141 | 409 |
| MS.gene32444.t1 | MTR_0543s0020 | 61.661 | 313 | 118 | 1 | 1 | 311 | 1 | 313 | 1.37e-141 | 409 |
| MS.gene32444.t1 | MTR_1g075870 | 65.926 | 270 | 87 | 1 | 58 | 327 | 2 | 266 | 2.28e-134 | 387 |
| MS.gene32444.t1 | MTR_2g099670 | 67.433 | 261 | 85 | 0 | 62 | 322 | 10 | 270 | 8.45e-133 | 388 |
| MS.gene32444.t1 | MTR_2g039930 | 68.860 | 228 | 71 | 0 | 82 | 309 | 1 | 228 | 1.98e-119 | 353 |
| MS.gene32444.t1 | MTR_7g097160 | 72.258 | 155 | 43 | 0 | 144 | 298 | 25 | 179 | 8.78e-79 | 247 |
| MS.gene32444.t1 | MTR_1g007150 | 37.809 | 283 | 162 | 7 | 2 | 273 | 114 | 393 | 4.19e-54 | 191 |
| MS.gene32444.t1 | MTR_1g116210 | 37.500 | 280 | 161 | 6 | 5 | 273 | 113 | 389 | 6.74e-54 | 190 |
| MS.gene32444.t1 | MTR_7g006030 | 35.439 | 285 | 165 | 6 | 5 | 273 | 31 | 312 | 6.86e-53 | 186 |
| MS.gene32444.t1 | MTR_3g110240 | 36.749 | 283 | 165 | 7 | 2 | 273 | 111 | 390 | 3.95e-52 | 186 |
| MS.gene32444.t1 | MTR_7g085540 | 35.106 | 282 | 167 | 5 | 9 | 277 | 147 | 425 | 2.94e-49 | 178 |
| MS.gene32444.t1 | MTR_8g014050 | 34.043 | 282 | 164 | 6 | 9 | 273 | 128 | 404 | 6.10e-46 | 169 |
| MS.gene32444.t1 | MTR_7g116400 | 44.444 | 81 | 37 | 2 | 82 | 154 | 3 | 83 | 1.83e-15 | 72.0 |
| MS.gene32444.t1 | MTR_5g022030 | 27.854 | 219 | 142 | 5 | 2 | 213 | 92 | 301 | 1.69e-14 | 75.9 |
| MS.gene32444.t1 | MTR_5g022030 | 27.854 | 219 | 142 | 5 | 2 | 213 | 92 | 301 | 2.09e-14 | 75.5 |
| MS.gene32444.t1 | MTR_5g009830 | 28.182 | 220 | 132 | 6 | 5 | 213 | 63 | 267 | 1.87e-13 | 72.0 |
| MS.gene32444.t1 | MTR_8g099095 | 29.717 | 212 | 131 | 7 | 9 | 213 | 66 | 266 | 1.88e-13 | 72.4 |
| MS.gene32444.t1 | MTR_5g075060 | 27.016 | 248 | 146 | 9 | 3 | 236 | 6 | 232 | 1.89e-13 | 72.4 |
| MS.gene32444.t1 | MTR_8g079790 | 26.106 | 226 | 144 | 5 | 1 | 213 | 117 | 332 | 1.91e-13 | 72.4 |
| MS.gene32444.t1 | MTR_4g132860 | 27.881 | 269 | 164 | 9 | 11 | 269 | 82 | 330 | 2.15e-13 | 71.6 |
| MS.gene32444.t1 | MTR_5g009830 | 28.182 | 220 | 132 | 6 | 5 | 213 | 63 | 267 | 2.67e-13 | 72.0 |
| MS.gene32444.t1 | MTR_0028s0170 | 30.000 | 220 | 128 | 8 | 5 | 213 | 74 | 278 | 2.80e-13 | 72.0 |
| MS.gene32444.t1 | MTR_3g098090 | 29.185 | 233 | 144 | 7 | 9 | 234 | 32 | 250 | 2.94e-13 | 71.6 |
| MS.gene32444.t1 | MTR_3g466400 | 27.500 | 240 | 153 | 9 | 4 | 236 | 9 | 234 | 4.82e-13 | 70.9 |
| MS.gene32444.t1 | MTR_4g128820 | 28.326 | 233 | 144 | 8 | 7 | 232 | 8 | 224 | 4.91e-13 | 70.9 |
| MS.gene32444.t1 | MTR_5g067150 | 25.877 | 228 | 150 | 6 | 7 | 227 | 7 | 222 | 2.61e-12 | 68.2 |
| MS.gene32444.t1 | MTR_5g067150 | 26.638 | 229 | 147 | 7 | 7 | 227 | 7 | 222 | 2.89e-12 | 68.2 |
| MS.gene32444.t1 | MTR_7g116390 | 25.000 | 236 | 158 | 5 | 8 | 237 | 15 | 237 | 3.01e-12 | 67.4 |
| MS.gene32444.t1 | MTR_1g101630 | 26.582 | 237 | 155 | 7 | 8 | 238 | 40 | 263 | 3.04e-12 | 68.6 |
| MS.gene32444.t1 | MTR_5g067150 | 26.638 | 229 | 147 | 7 | 7 | 227 | 7 | 222 | 3.81e-12 | 68.2 |
| MS.gene32444.t1 | MTR_7g072710 | 26.897 | 290 | 166 | 14 | 11 | 278 | 47 | 312 | 4.47e-12 | 67.4 |
| MS.gene32444.t1 | MTR_7g118020 | 25.339 | 221 | 145 | 5 | 3 | 213 | 138 | 348 | 6.83e-12 | 67.8 |
| MS.gene32444.t1 | MTR_7g073520 | 26.496 | 234 | 150 | 7 | 9 | 236 | 148 | 365 | 7.95e-12 | 67.4 |
| MS.gene32444.t1 | MTR_5g017890 | 24.252 | 301 | 195 | 10 | 8 | 293 | 371 | 653 | 8.57e-12 | 67.4 |
| MS.gene32444.t1 | MTR_8g095440 | 27.014 | 211 | 138 | 5 | 9 | 213 | 30 | 230 | 1.19e-11 | 66.6 |
| MS.gene32444.t1 | MTR_3g099920 | 26.271 | 236 | 128 | 8 | 9 | 224 | 19 | 228 | 1.61e-11 | 66.2 |
| MS.gene32444.t1 | MTR_1g026190 | 27.660 | 235 | 149 | 7 | 9 | 234 | 78 | 300 | 1.68e-11 | 66.2 |
| MS.gene32444.t1 | MTR_8g095440 | 27.014 | 211 | 138 | 5 | 9 | 213 | 30 | 230 | 2.87e-11 | 65.5 |
| MS.gene32444.t1 | MTR_2g049790 | 29.279 | 222 | 128 | 11 | 6 | 214 | 20 | 225 | 2.91e-11 | 65.5 |
| MS.gene32444.t1 | MTR_7g106730 | 25.822 | 213 | 142 | 5 | 9 | 215 | 88 | 290 | 2.91e-11 | 65.1 |
| MS.gene32444.t1 | MTR_4g066660 | 29.586 | 169 | 109 | 4 | 8 | 167 | 71 | 238 | 3.57e-11 | 65.5 |
| MS.gene32444.t1 | MTR_8g024100 | 26.897 | 290 | 179 | 12 | 1 | 282 | 8 | 272 | 3.84e-11 | 65.5 |
| MS.gene32444.t1 | MTR_4g086660 | 25.778 | 225 | 143 | 6 | 1 | 213 | 129 | 341 | 4.24e-11 | 65.1 |
| MS.gene32444.t1 | MTR_5g007590 | 44.776 | 67 | 29 | 1 | 79 | 145 | 61 | 119 | 4.78e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32444.t1 | AT4G28860 | 59.615 | 416 | 148 | 3 | 1 | 408 | 1 | 404 | 1.89e-179 | 506 |
| MS.gene32444.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 7.91e-177 | 500 |
| MS.gene32444.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 7.91e-177 | 500 |
| MS.gene32444.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 7.91e-177 | 500 |
| MS.gene32444.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 7.91e-177 | 500 |
| MS.gene32444.t1 | AT4G28860 | 70.154 | 325 | 96 | 1 | 1 | 325 | 1 | 324 | 5.97e-176 | 496 |
| MS.gene32444.t1 | AT5G57015 | 67.702 | 322 | 102 | 1 | 1 | 320 | 1 | 322 | 7.53e-166 | 473 |
| MS.gene32444.t1 | AT4G26100 | 55.990 | 409 | 166 | 5 | 1 | 405 | 1 | 399 | 1.49e-165 | 473 |
| MS.gene32444.t1 | AT3G23340 | 64.832 | 327 | 111 | 1 | 1 | 327 | 1 | 323 | 7.36e-160 | 458 |
| MS.gene32444.t1 | AT1G72710 | 66.144 | 319 | 107 | 1 | 1 | 319 | 1 | 318 | 8.55e-160 | 459 |
| MS.gene32444.t1 | AT5G44100 | 68.792 | 298 | 93 | 0 | 1 | 298 | 1 | 298 | 4.54e-159 | 457 |
| MS.gene32444.t1 | AT5G44100 | 68.792 | 298 | 93 | 0 | 1 | 298 | 1 | 298 | 4.54e-159 | 457 |
| MS.gene32444.t1 | AT1G03930 | 67.450 | 298 | 97 | 0 | 1 | 298 | 1 | 298 | 4.50e-158 | 454 |
| MS.gene32444.t1 | AT2G19470 | 54.279 | 409 | 172 | 3 | 1 | 409 | 1 | 394 | 6.57e-158 | 452 |
| MS.gene32444.t1 | AT4G28540 | 66.780 | 295 | 98 | 0 | 1 | 295 | 5 | 299 | 2.84e-155 | 447 |
| MS.gene32444.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 7.66e-155 | 447 |
| MS.gene32444.t1 | AT4G14340 | 62.385 | 327 | 119 | 1 | 1 | 327 | 7 | 329 | 1.36e-153 | 442 |
| MS.gene32444.t1 | AT1G04440 | 66.443 | 298 | 100 | 0 | 1 | 298 | 1 | 298 | 2.59e-153 | 442 |
| MS.gene32444.t1 | AT4G14340 | 62.385 | 327 | 119 | 1 | 1 | 327 | 7 | 329 | 3.34e-153 | 438 |
| MS.gene32444.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 5.33e-153 | 438 |
| MS.gene32444.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 5.33e-153 | 438 |
| MS.gene32444.t1 | AT3G23340 | 60.856 | 327 | 110 | 2 | 1 | 327 | 1 | 309 | 8.16e-146 | 422 |
| MS.gene32444.t1 | AT4G08800 | 57.718 | 298 | 94 | 2 | 1 | 298 | 1 | 266 | 1.37e-123 | 360 |
| MS.gene32444.t1 | AT2G25760 | 36.786 | 280 | 162 | 4 | 9 | 273 | 107 | 386 | 6.05e-55 | 193 |
| MS.gene32444.t1 | AT2G25760 | 36.786 | 280 | 159 | 5 | 9 | 273 | 107 | 383 | 1.50e-53 | 189 |
| MS.gene32444.t1 | AT3G13670 | 35.640 | 289 | 167 | 6 | 5 | 277 | 131 | 416 | 1.56e-53 | 190 |
| MS.gene32444.t1 | AT3G03940 | 35.461 | 282 | 166 | 5 | 9 | 277 | 140 | 418 | 3.00e-50 | 181 |
| MS.gene32444.t1 | AT5G18190 | 35.106 | 282 | 167 | 5 | 9 | 277 | 130 | 408 | 3.57e-50 | 180 |
| MS.gene32444.t1 | AT5G18190 | 35.106 | 282 | 167 | 5 | 9 | 277 | 130 | 408 | 3.57e-50 | 180 |
| MS.gene32444.t1 | AT3G06030 | 28.571 | 245 | 144 | 8 | 8 | 237 | 67 | 295 | 1.80e-14 | 75.9 |
| MS.gene32444.t1 | AT4G36070 | 27.982 | 218 | 140 | 6 | 8 | 217 | 70 | 278 | 2.15e-14 | 75.5 |
| MS.gene32444.t1 | AT2G17890 | 28.169 | 213 | 137 | 5 | 8 | 213 | 107 | 310 | 2.32e-14 | 75.5 |
| MS.gene32444.t1 | AT4G36070 | 27.982 | 218 | 140 | 6 | 8 | 217 | 70 | 278 | 3.18e-14 | 75.1 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 3.83e-14 | 74.3 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 3.83e-14 | 74.3 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 3.99e-14 | 74.3 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 4.01e-14 | 74.3 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 4.74e-14 | 74.3 |
| MS.gene32444.t1 | AT5G66210 | 28.302 | 212 | 136 | 5 | 9 | 213 | 62 | 264 | 4.74e-14 | 74.3 |
| MS.gene32444.t1 | AT2G46700 | 27.354 | 223 | 138 | 7 | 3 | 213 | 137 | 347 | 8.91e-14 | 73.6 |
| MS.gene32444.t1 | AT5G66850 | 27.039 | 233 | 147 | 7 | 5 | 224 | 342 | 564 | 2.14e-13 | 72.8 |
| MS.gene32444.t1 | AT5G66850 | 27.039 | 233 | 147 | 7 | 5 | 224 | 342 | 564 | 2.30e-13 | 72.4 |
| MS.gene32444.t1 | AT3G49370 | 27.854 | 219 | 138 | 6 | 7 | 215 | 140 | 348 | 3.63e-13 | 71.6 |
| MS.gene32444.t1 | AT1G62400 | 28.090 | 267 | 162 | 9 | 11 | 267 | 88 | 334 | 4.13e-13 | 70.9 |
| MS.gene32444.t1 | AT5G25110 | 25.726 | 241 | 158 | 8 | 3 | 236 | 37 | 263 | 5.29e-13 | 70.9 |
| MS.gene32444.t1 | AT3G50530 | 26.009 | 223 | 145 | 5 | 1 | 213 | 140 | 352 | 9.80e-13 | 70.5 |
| MS.gene32444.t1 | AT3G53930 | 24.627 | 268 | 175 | 6 | 5 | 254 | 16 | 274 | 1.09e-12 | 70.5 |
| MS.gene32444.t1 | AT3G53930 | 24.627 | 268 | 175 | 6 | 5 | 254 | 16 | 274 | 1.22e-12 | 70.1 |
| MS.gene32444.t1 | AT4G23650 | 29.032 | 217 | 130 | 6 | 9 | 215 | 78 | 280 | 1.62e-12 | 69.7 |
| MS.gene32444.t1 | AT4G14580 | 26.749 | 243 | 146 | 9 | 2 | 227 | 10 | 237 | 1.74e-12 | 69.3 |
| MS.gene32444.t1 | AT5G10930 | 25.620 | 242 | 158 | 8 | 3 | 236 | 6 | 233 | 1.91e-12 | 69.3 |
| MS.gene32444.t1 | AT3G23000 | 26.068 | 234 | 152 | 8 | 3 | 227 | 19 | 240 | 3.63e-12 | 68.2 |
| MS.gene32444.t1 | AT2G31500 | 28.111 | 217 | 130 | 7 | 8 | 213 | 65 | 266 | 4.03e-12 | 68.6 |
| MS.gene32444.t1 | AT1G01140 | 27.686 | 242 | 145 | 12 | 7 | 236 | 17 | 240 | 6.38e-12 | 67.4 |
| MS.gene32444.t1 | AT1G51660 | 25.882 | 255 | 156 | 10 | 12 | 255 | 82 | 314 | 6.52e-12 | 67.0 |
| MS.gene32444.t1 | AT3G08720 | 25.000 | 232 | 155 | 6 | 9 | 236 | 140 | 356 | 7.00e-12 | 67.4 |
| MS.gene32444.t1 | AT3G08720 | 25.000 | 232 | 155 | 6 | 9 | 236 | 140 | 356 | 7.00e-12 | 67.4 |
| MS.gene32444.t1 | AT3G08720 | 25.000 | 232 | 155 | 6 | 9 | 236 | 140 | 356 | 7.00e-12 | 67.4 |
| MS.gene32444.t1 | AT3G08720 | 25.000 | 232 | 155 | 6 | 9 | 236 | 140 | 356 | 7.00e-12 | 67.4 |
| MS.gene32444.t1 | AT1G08650 | 27.236 | 246 | 146 | 9 | 8 | 240 | 14 | 239 | 8.03e-12 | 65.9 |
| MS.gene32444.t1 | AT1G01140 | 27.686 | 242 | 145 | 12 | 7 | 236 | 17 | 240 | 8.25e-12 | 67.0 |
| MS.gene32444.t1 | AT1G08650 | 26.446 | 242 | 153 | 7 | 8 | 240 | 14 | 239 | 1.01e-11 | 65.9 |
| MS.gene32444.t1 | AT5G24430 | 27.397 | 219 | 139 | 7 | 7 | 215 | 141 | 349 | 1.78e-11 | 66.6 |
| MS.gene32444.t1 | AT4G24400 | 25.200 | 250 | 156 | 8 | 7 | 249 | 7 | 232 | 1.97e-11 | 65.9 |
| MS.gene32444.t1 | AT3G08730 | 25.630 | 238 | 157 | 7 | 4 | 236 | 128 | 350 | 2.06e-11 | 65.9 |
| MS.gene32444.t1 | AT3G08730 | 25.630 | 238 | 157 | 7 | 4 | 236 | 128 | 350 | 2.06e-11 | 65.9 |
| MS.gene32444.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 19 | 217 | 2.41e-11 | 65.9 |
| MS.gene32444.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 19 | 217 | 2.41e-11 | 65.9 |
| MS.gene32444.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 42 | 240 | 2.61e-11 | 65.9 |
| MS.gene32444.t1 | AT2G17530 | 31.973 | 147 | 88 | 4 | 2 | 136 | 31 | 177 | 2.88e-11 | 65.1 |
| MS.gene32444.t1 | AT4G24400 | 25.200 | 250 | 156 | 8 | 7 | 249 | 7 | 232 | 2.88e-11 | 65.5 |
| MS.gene32444.t1 | AT1G35670 | 27.586 | 232 | 149 | 7 | 9 | 234 | 26 | 244 | 3.24e-11 | 65.5 |
| MS.gene32444.t1 | AT2G17530 | 31.973 | 147 | 88 | 4 | 2 | 136 | 31 | 177 | 3.26e-11 | 65.5 |
| MS.gene32444.t1 | AT2G17530 | 31.973 | 147 | 88 | 4 | 2 | 136 | 31 | 177 | 3.26e-11 | 65.5 |
| MS.gene32444.t1 | AT1G01140 | 27.686 | 242 | 147 | 12 | 7 | 236 | 17 | 242 | 3.91e-11 | 65.1 |
| MS.gene32444.t1 | AT5G21326 | 26.104 | 249 | 140 | 10 | 7 | 236 | 11 | 234 | 3.95e-11 | 65.1 |
| MS.gene32444.t1 | AT4G32830 | 26.582 | 237 | 144 | 9 | 9 | 236 | 31 | 246 | 4.02e-11 | 63.9 |
| MS.gene32444.t1 | AT1G67580 | 27.848 | 237 | 143 | 8 | 14 | 240 | 411 | 629 | 4.72e-11 | 65.5 |
| MS.gene32444.t1 | AT1G67580 | 27.848 | 237 | 143 | 8 | 14 | 240 | 411 | 629 | 4.72e-11 | 65.5 |
| MS.gene32444.t1 | AT1G63700 | 26.293 | 232 | 141 | 9 | 6 | 224 | 397 | 611 | 6.72e-11 | 65.1 |
| MS.gene32444.t1 | AT1G63700 | 26.293 | 232 | 141 | 9 | 6 | 224 | 397 | 611 | 6.72e-11 | 65.1 |
| MS.gene32444.t1 | AT2G41860 | 26.415 | 212 | 140 | 6 | 8 | 213 | 53 | 254 | 7.04e-11 | 64.3 |
| MS.gene32444.t1 | AT1G12580 | 25.581 | 215 | 142 | 6 | 8 | 215 | 43 | 246 | 1.00e-10 | 63.9 |
Find 102 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTAGTTCTTGAACTTA+TGG | 0.162372 | 1.4:-12344235 | MS.gene32444:CDS |
| GAGGTTTCCACAGTCGTTTC+TGG | 0.189583 | 1.4:+12341439 | None:intergenic |
| TCCACAGTCGTTTCTGGTTT+TGG | 0.193952 | 1.4:+12341445 | None:intergenic |
| GTACCAAACCATTTCATTCT+TGG | 0.227657 | 1.4:+12344273 | None:intergenic |
| CATTAGACTAACCTTCTTAA+TGG | 0.235709 | 1.4:+12345066 | None:intergenic |
| CAGGTTTGTATGATTGATTT+TGG | 0.247101 | 1.4:-12343431 | MS.gene32444:CDS |
| CAAACCGGATAACTTTCTTA+TGG | 0.257400 | 1.4:-12343605 | MS.gene32444:CDS |
| TCATTTGGTGAAATTTATAT+TGG | 0.266055 | 1.4:-12345207 | MS.gene32444:intron |
| TTTGATCAACGACCAGATTA+TGG | 0.266409 | 1.4:-12342447 | MS.gene32444:CDS |
| AAGTTATATAATATTCTTAA+AGG | 0.281266 | 1.4:-12344417 | MS.gene32444:CDS |
| TATAGAATTGGTAGGAAAAT+TGG | 0.283963 | 1.4:-12345237 | MS.gene32444:CDS |
| GTTCTAGTTCTTGAACTTAT+GGG | 0.300809 | 1.4:-12344234 | MS.gene32444:CDS |
| GCAAAGCCGCAGAGATGATT+TGG | 0.307778 | 1.4:-12342897 | MS.gene32444:CDS |
| TCAAACCCGGATGGTGTGTT+AGG | 0.332269 | 1.4:-12341418 | MS.gene32444:CDS |
| AAACCGGATAACTTTCTTAT+GGG | 0.337171 | 1.4:-12343604 | MS.gene32444:CDS |
| CGTGAATTGTTCACTTCTAA+AGG | 0.340115 | 1.4:-12342405 | MS.gene32444:intron |
| GTCCCCTACCGTCTAATTGA+TGG | 0.360338 | 1.4:+12341342 | None:intergenic |
| GATAACTTTCTTATGGGTCT+TGG | 0.366159 | 1.4:-12343598 | MS.gene32444:CDS |
| GTTGGAGGAAAGTATAGAAT+TGG | 0.371829 | 1.4:-12345249 | MS.gene32444:CDS |
| GTTACAAGCATATCCCTTAC+AGG | 0.376749 | 1.4:-12343379 | MS.gene32444:intron |
| TCAGGAGATTCAACAGATAA+AGG | 0.377164 | 1.4:-12342147 | MS.gene32444:CDS |
| CGCTTCAAATATCCATAATC+TGG | 0.378050 | 1.4:+12342435 | None:intergenic |
| TTGGACTTTCAAAAGGATAC+AGG | 0.395538 | 1.4:-12343412 | MS.gene32444:CDS |
| AAAATTGGTAGTGGATCATT+TGG | 0.395776 | 1.4:-12345222 | MS.gene32444:CDS |
| AGATTGGTAGGCACGGCAAC+TGG | 0.403926 | 1.4:+12341904 | None:intergenic |
| CACGTGTTTGTATGAAGCTC+AGG | 0.404014 | 1.4:-12341682 | MS.gene32444:CDS |
| AGCAATACTCACAAAGGAAT+TGG | 0.405316 | 1.4:-12343012 | MS.gene32444:intron |
| TAAAGAATCTTATACCTGTA+AGG | 0.409911 | 1.4:+12343365 | None:intergenic |
| ATTCCAAGAATGAAATGGTT+TGG | 0.419642 | 1.4:-12344276 | MS.gene32444:CDS |
| ATAACTTTCTTATGGGTCTT+GGG | 0.425665 | 1.4:-12343597 | MS.gene32444:CDS |
| CATACAAACACGTGGACGTT+CGG | 0.428322 | 1.4:+12341691 | None:intergenic |
| TTTGATGTTGGCCGATCAAA+TGG | 0.434639 | 1.4:-12344154 | MS.gene32444:intron |
| GACAGTGGAAACAGGTAAAT+CGG | 0.439640 | 1.4:+12341486 | None:intergenic |
| CACATCCCCTGGTTCAAGAT+TGG | 0.445224 | 1.4:+12341888 | None:intergenic |
| GTGGTATTCCAAGAATGAAA+TGG | 0.445472 | 1.4:-12344281 | MS.gene32444:CDS |
| TTACTCCCTAACACACCATC+CGG | 0.448736 | 1.4:+12341412 | None:intergenic |
| ATGCTGACTATTTATATGAC+TGG | 0.453335 | 1.4:-12342184 | MS.gene32444:CDS |
| AAGTGAACAATTCACGAAAC+AGG | 0.453549 | 1.4:+12342412 | None:intergenic |
| GATAGAGTATTTACATTCCA+AGG | 0.456851 | 1.4:-12343647 | MS.gene32444:CDS |
| AGAGATGATTTGGAGTCTCT+TGG | 0.463429 | 1.4:-12342887 | MS.gene32444:CDS |
| TCTTGGGAAGAAAGCAAATC+AGG | 0.466032 | 1.4:-12343581 | MS.gene32444:intron |
| TAACACACCATCCGGGTTTG+AGG | 0.472391 | 1.4:+12341420 | None:intergenic |
| CAATCTTGAACCAGGGGATG+TGG | 0.472799 | 1.4:-12341887 | MS.gene32444:CDS |
| CATGATCCGCATACCTCAAT+GGG | 0.474980 | 1.4:+12342636 | None:intergenic |
| ATCTCTGTGTAGTAATCCCT+TGG | 0.476514 | 1.4:+12343630 | None:intergenic |
| TGAGCTTGTGGCCATTAAGA+AGG | 0.478601 | 1.4:-12345077 | MS.gene32444:intron |
| GTAGGCATGACAGTGGAAAC+AGG | 0.480866 | 1.4:+12341478 | None:intergenic |
| TTGATGGAAAAGGTTGTTGG+AGG | 0.500008 | 1.4:-12345264 | MS.gene32444:CDS |
| ACATGATCCGCATACCTCAA+TGG | 0.503636 | 1.4:+12342635 | None:intergenic |
| CAAACCCGGATGGTGTGTTA+GGG | 0.506212 | 1.4:-12341417 | MS.gene32444:CDS |
| ACAACCACAGCTACTATATG+AGG | 0.509476 | 1.4:-12344442 | MS.gene32444:CDS |
| ACTTCCCACTACAGTAGTAA+AGG | 0.514128 | 1.4:+12344193 | None:intergenic |
| ATCAATGATTACCATTTGAT+CGG | 0.515460 | 1.4:+12344143 | None:intergenic |
| ATGTGGTGCTTCTGATGACT+TGG | 0.519856 | 1.4:-12341389 | MS.gene32444:CDS |
| TGTTGTGACTTCTGAGCTTG+TGG | 0.519886 | 1.4:-12345089 | MS.gene32444:CDS |
| AAAGAATCTTATACCTGTAA+GGG | 0.525824 | 1.4:+12343366 | None:intergenic |
| ATGAAATGGTTTGGTACTGA+TGG | 0.526555 | 1.4:-12344267 | MS.gene32444:CDS |
| GGGATATGCTTGTAACTGAT+AGG | 0.529353 | 1.4:+12343386 | None:intergenic |
| GTATGCTCATCCACATCCCC+TGG | 0.539165 | 1.4:+12341877 | None:intergenic |
| GGGGATGTGGATGAGCATAC+AGG | 0.543688 | 1.4:-12341874 | MS.gene32444:intron |
| ATTGGTAGGAAAATTGGTAG+TGG | 0.545412 | 1.4:-12345231 | MS.gene32444:CDS |
| AGACCCATAAGAAAGTTATC+CGG | 0.547262 | 1.4:+12343601 | None:intergenic |
| CTTGCAGACCTTGCCAAGGA+AGG | 0.550925 | 1.4:+12342712 | None:intergenic |
| TTCTAGTTCTTGAACTTATG+GGG | 0.551546 | 1.4:-12344233 | MS.gene32444:CDS |
| TAAAGGAGGTCGTCGAGACT+CGG | 0.558842 | 1.4:+12344210 | None:intergenic |
| TTATATAATATTCTTAAAGG+AGG | 0.558963 | 1.4:-12344414 | MS.gene32444:CDS |
| GTGCCTACCAATCTTGAACC+AGG | 0.566503 | 1.4:-12341895 | MS.gene32444:CDS |
| ACGTTGACAATCTTGACGAT+GGG | 0.568014 | 1.4:-12341652 | MS.gene32444:CDS |
| ATAGAGTATTTACATTCCAA+GGG | 0.572950 | 1.4:-12343646 | MS.gene32444:CDS |
| ACCTCCTTTACTACTGTAGT+GGG | 0.573795 | 1.4:-12344197 | MS.gene32444:CDS |
| TACTCCCTAACACACCATCC+GGG | 0.576302 | 1.4:+12341413 | None:intergenic |
| TGCCTACCAATCTTGAACCA+GGG | 0.576514 | 1.4:-12341894 | MS.gene32444:CDS |
| GACCTCCTTTACTACTGTAG+TGG | 0.577698 | 1.4:-12344198 | MS.gene32444:CDS |
| TTTGCCTCATATAGTAGCTG+TGG | 0.584195 | 1.4:+12344438 | None:intergenic |
| TGGACTTTCAAAAGGATACA+GGG | 0.587624 | 1.4:-12343411 | MS.gene32444:CDS |
| GACTGTGGAAACCTCAAACC+CGG | 0.587686 | 1.4:-12341431 | MS.gene32444:CDS |
| ACTACACAGAGATATCAAAC+CGG | 0.594392 | 1.4:-12343620 | MS.gene32444:CDS |
| GATGAAACTCGGTGTAGTGA+AGG | 0.600695 | 1.4:+12341364 | None:intergenic |
| TGTTTCCACTGTCATGCCTA+CGG | 0.604626 | 1.4:-12341476 | MS.gene32444:CDS |
| GAGGAAAGTATAGAATTGGT+AGG | 0.607818 | 1.4:-12345245 | MS.gene32444:CDS |
| AACGTTGACAATCTTGACGA+TGG | 0.608606 | 1.4:-12341653 | MS.gene32444:CDS |
| GCCTACCAATCTTGAACCAG+GGG | 0.621460 | 1.4:-12341893 | MS.gene32444:CDS |
| TCCCCTGGTTCAAGATTGGT+AGG | 0.622845 | 1.4:+12341892 | None:intergenic |
| TGGTTCAAGATTGGTAGGCA+CGG | 0.626202 | 1.4:+12341897 | None:intergenic |
| TTTGATGACAGCAGCTTACG+AGG | 0.629738 | 1.4:-12343669 | MS.gene32444:intron |
| AAGTAAGAAGCAAACTCCAC+GGG | 0.633022 | 1.4:+12342492 | None:intergenic |
| TGGTCGTTGATCAAATGTCA+AGG | 0.635061 | 1.4:+12342455 | None:intergenic |
| AAAGTAAGAAGCAAACTCCA+CGG | 0.637426 | 1.4:+12342491 | None:intergenic |
| GCAAGTAGCAATACTCACAA+AGG | 0.640002 | 1.4:-12343018 | MS.gene32444:CDS |
| TCTAATTGATGGATGAAACT+CGG | 0.642707 | 1.4:+12341353 | None:intergenic |
| GCAGCTTGCAGACCTTGCCA+AGG | 0.651297 | 1.4:+12342708 | None:intergenic |
| ACGTGTTTGTATGAAGCTCA+GGG | 0.653358 | 1.4:-12341681 | MS.gene32444:CDS |
| GAAGTTAAACACTCCCATTG+AGG | 0.660651 | 1.4:-12342649 | MS.gene32444:intron |
| GTGGAAACCTCAAACCCGGA+TGG | 0.660831 | 1.4:-12341427 | MS.gene32444:CDS |
| CTGAGCTTCATACAAACACG+TGG | 0.660997 | 1.4:+12341683 | None:intergenic |
| ACTTTGCAAGTCATGTCCCG+TGG | 0.667670 | 1.4:-12342508 | MS.gene32444:CDS |
| GGTGTGTTAGGGAGTAAATG+TGG | 0.675214 | 1.4:-12341406 | MS.gene32444:CDS |
| ATCTTCCGTAGGCATGACAG+TGG | 0.675961 | 1.4:+12341471 | None:intergenic |
| GTTGATCAAATGTCAAGGAG+CGG | 0.678095 | 1.4:+12342460 | None:intergenic |
| TCCAAAACCAGAAACGACTG+TGG | 0.684719 | 1.4:-12341446 | MS.gene32444:CDS |
| TCCCACTACAGTAGTAAAGG+AGG | 0.693375 | 1.4:+12344196 | None:intergenic |
| GAGACTCCAAATCATCTCTG+CGG | 0.717836 | 1.4:+12342891 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAAGAAAAAAAAT+AGG | + | chr1.4:12341617-12341636 | None:intergenic | 10.0% |
| !! | AAGTTATATAATATTCTTAA+AGG | - | chr1.4:12342198-12342217 | MS.gene32444:intron | 10.0% |
| !! | TATAATTAAATTTACACATT+TGG | - | chr1.4:12345058-12345077 | MS.gene32444:intron | 10.0% |
| !!! | ATTACATCATTTTTATATTT+TGG | - | chr1.4:12341945-12341964 | MS.gene32444:intron | 10.0% |
| !!! | TTACATCATTTTTATATTTT+GGG | - | chr1.4:12341946-12341965 | MS.gene32444:intron | 10.0% |
| !! | AAAAAAAATAGGAAAATTCT+TGG | + | chr1.4:12341606-12341625 | None:intergenic | 15.0% |
| !! | AAAGAAGACAAATTTAAAAA+CGG | + | chr1.4:12342532-12342551 | None:intergenic | 15.0% |
| !! | AAATGATGTAATCAAATTTA+AGG | + | chr1.4:12341937-12341956 | None:intergenic | 15.0% |
| !! | ATATAGTTAAATTCAAACTT+TGG | - | chr1.4:12344550-12344569 | MS.gene32444:intron | 15.0% |
| !! | GTTAAAAATTGGAAATATAT+AGG | + | chr1.4:12343133-12343152 | None:intergenic | 15.0% |
| !! | TTATATAATATTCTTAAAGG+AGG | - | chr1.4:12342201-12342220 | MS.gene32444:intron | 15.0% |
| !!! | TTTTTACATATGTTTAATAC+CGG | + | chr1.4:12344028-12344047 | None:intergenic | 15.0% |
| !! | ATATCTTAAGACAATAAAGA+AGG | + | chr1.4:12343650-12343669 | None:intergenic | 20.0% |
| !! | ATCACTATAATGAATTAGAA+AGG | + | chr1.4:12342304-12342323 | None:intergenic | 20.0% |
| !! | ATGAAAATTTAACCATGAAA+AGG | + | chr1.4:12344580-12344599 | None:intergenic | 20.0% |
| !! | TAAAAATTGAAGCTTATCAA+AGG | + | chr1.4:12344521-12344540 | None:intergenic | 20.0% |
| !! | TATCATCATACGTTAAAAAT+TGG | + | chr1.4:12343144-12343163 | None:intergenic | 20.0% |
| !! | TGAAAATTTAACCATGAAAA+GGG | + | chr1.4:12344579-12344598 | None:intergenic | 20.0% |
| !! | TTGTTGTAATAATTGTGATT+AGG | - | chr1.4:12341632-12341651 | MS.gene32444:intron | 20.0% |
| !! | TTTCTAATTCATTATAGTGA+TGG | - | chr1.4:12342303-12342322 | MS.gene32444:intron | 20.0% |
| !!! | AAAAAGTACATGTACTTATT+TGG | - | chr1.4:12344043-12344062 | MS.gene32444:intron | 20.0% |
| !!! | AACGGGAATTTTTTTTTTTT+CGG | + | chr1.4:12341834-12341853 | None:intergenic | 20.0% |
| !!! | ATTTTTATCATGTGAATTCT+TGG | - | chr1.4:12343396-12343415 | MS.gene32444:CDS | 20.0% |
| !!! | CTTCGATTTTTTTTTCTAAA+AGG | - | chr1.4:12343442-12343461 | MS.gene32444:intron | 20.0% |
| !!! | GATTGTTAATTTACATCTTT+TGG | - | chr1.4:12342067-12342086 | MS.gene32444:intron | 20.0% |
| !!! | GTTAATTTATGATCATTTTC+AGG | - | chr1.4:12341497-12341516 | MS.gene32444:CDS | 20.0% |
| !!! | TCATTTGGTGAAATTTATAT+TGG | - | chr1.4:12341408-12341427 | MS.gene32444:CDS | 20.0% |
| !!! | TTATCATTTGTTGTATCATA+AGG | - | chr1.4:12343327-12343346 | MS.gene32444:intron | 20.0% |
| !!! | TTTTCATGGTTAAATGTATA+TGG | - | chr1.4:12344619-12344638 | MS.gene32444:intron | 20.0% |
| !!! | TTTTTCATATTTTTGCATTC+TGG | + | chr1.4:12343935-12343954 | None:intergenic | 20.0% |
| ! | AAAGAAATAAAACAGGCTTA+GGG | + | chr1.4:12342929-12342948 | None:intergenic | 25.0% |
| ! | AAAGAATCTTATACCTGTAA+GGG | + | chr1.4:12343252-12343271 | None:intergenic | 25.0% |
| ! | AACAAAGGAAAAATATTGTG+AGG | + | chr1.4:12342273-12342292 | None:intergenic | 25.0% |
| ! | AATAAGCTAAACACAACTAA+TGG | - | chr1.4:12342835-12342854 | MS.gene32444:intron | 25.0% |
| ! | ACAAAGGAAAAATATTGTGA+GGG | + | chr1.4:12342272-12342291 | None:intergenic | 25.0% |
| ! | AGACAAATTTAAAAACGGAA+AGG | + | chr1.4:12342527-12342546 | None:intergenic | 25.0% |
| ! | ATAAAGTAACTCACTTGAAT+TGG | - | chr1.4:12345081-12345100 | MS.gene32444:CDS | 25.0% |
| ! | ATAGATAGCAAAATTCAAAG+TGG | + | chr1.4:12343497-12343516 | None:intergenic | 25.0% |
| ! | ATCAATGATTACCATTTGAT+CGG | + | chr1.4:12342475-12342494 | None:intergenic | 25.0% |
| ! | ATGAAATATGTTACATTCAC+AGG | - | chr1.4:12343165-12343184 | MS.gene32444:intron | 25.0% |
| ! | ATGGTAAAAGTAGAATCAAT+AGG | + | chr1.4:12343795-12343814 | None:intergenic | 25.0% |
| ! | CATATATCAGCAAACATAAA+TGG | - | chr1.4:12343085-12343104 | MS.gene32444:intron | 25.0% |
| ! | CTCAAATAAGTAAATCAAAC+AGG | - | chr1.4:12342903-12342922 | MS.gene32444:intron | 25.0% |
| ! | TAAAGAATCTTATACCTGTA+AGG | + | chr1.4:12343253-12343272 | None:intergenic | 25.0% |
| ! | TATAGAATTGGTAGGAAAAT+TGG | - | chr1.4:12341378-12341397 | MS.gene32444:CDS | 25.0% |
| ! | TATGAATTACAAATACTCCT+GGG | - | chr1.4:12341719-12341738 | MS.gene32444:CDS | 25.0% |
| ! | TCACTTCCTAAATTTATGTT+TGG | - | chr1.4:12344399-12344418 | MS.gene32444:intron | 25.0% |
| ! | TCTCCTATAAAACAAGAATA+TGG | + | chr1.4:12342140-12342159 | None:intergenic | 25.0% |
| ! | TGTCATCAAAGAAATAAAAC+AGG | + | chr1.4:12342936-12342955 | None:intergenic | 25.0% |
| !! | AAATATTTTCCGTATTGTGA+AGG | - | chr1.4:12344808-12344827 | MS.gene32444:intron | 25.0% |
| !! | ATAGAGTATTTACATTCCAA+GGG | - | chr1.4:12342969-12342988 | MS.gene32444:intron | 25.0% |
| !! | CAATCATTGTATTCTGAAAA+AGG | + | chr1.4:12344869-12344888 | None:intergenic | 25.0% |
| !! | CATTATAGTGATGGAATTTA+AGG | - | chr1.4:12342312-12342331 | MS.gene32444:intron | 25.0% |
| !! | TTGAGCACATTAGTTTAAAA+TGG | - | chr1.4:12342636-12342655 | MS.gene32444:intron | 25.0% |
| !! | TTTCAAGGATTTTCAATTTC+AGG | - | chr1.4:12344296-12344315 | MS.gene32444:intron | 25.0% |
| !!! | ATGCTCAAACATTTTTTTCA+TGG | - | chr1.4:12344605-12344624 | MS.gene32444:intron | 25.0% |
| !!! | ATTGATTTTGGACTTTCAAA+AGG | - | chr1.4:12343196-12343215 | MS.gene32444:intron | 25.0% |
| !!! | CAATACGGAAAATATTTTGA+AGG | + | chr1.4:12344805-12344824 | None:intergenic | 25.0% |
| !!! | GAAATTGTTGCTTTGATTTT+TGG | - | chr1.4:12341574-12341593 | MS.gene32444:intron | 25.0% |
| !!! | GTTCTTTTGTACTTTTTAAG+AGG | - | chr1.4:12343755-12343774 | MS.gene32444:intron | 25.0% |
| !!! | TAGCCATATTCTTGTTTTAT+AGG | - | chr1.4:12342134-12342153 | MS.gene32444:CDS | 25.0% |
| !!! | TTTATATTTTGGGTAGTACA+TGG | - | chr1.4:12341956-12341975 | MS.gene32444:intron | 25.0% |
| !!! | TTTTGTACTTTTTAAGAGGA+AGG | - | chr1.4:12343759-12343778 | MS.gene32444:intron | 25.0% |
| AAACCGGATAACTTTCTTAT+GGG | - | chr1.4:12343011-12343030 | MS.gene32444:intron | 30.0% | |
| AAAGGAAAAGATGCATTCAA+CGG | + | chr1.4:12342509-12342528 | None:intergenic | 30.0% | |
| AAATCGAGAGTGAAAATTGT+AGG | + | chr1.4:12343680-12343699 | None:intergenic | 30.0% | |
| ACAACGAATTTCTTGTTCTT+AGG | - | chr1.4:12344083-12344102 | MS.gene32444:intron | 30.0% | |
| ACTAAGATACACCTATTCTT+AGG | + | chr1.4:12341754-12341773 | None:intergenic | 30.0% | |
| AGAAAGGACTAAGAAAACAA+AGG | + | chr1.4:12342288-12342307 | None:intergenic | 30.0% | |
| AGAGAGAACAAAAACTTAAC+TGG | - | chr1.4:12343561-12343580 | MS.gene32444:intron | 30.0% | |
| ATAACTTTCTTATGGGTCTT+GGG | - | chr1.4:12343018-12343037 | MS.gene32444:CDS | 30.0% | |
| ATCCTGCCAAACATAAATTT+AGG | + | chr1.4:12344408-12344427 | None:intergenic | 30.0% | |
| ATCGTGAGTATCAAACAATT+TGG | + | chr1.4:12344354-12344373 | None:intergenic | 30.0% | |
| ATTCCAAGAATGAAATGGTT+TGG | - | chr1.4:12342339-12342358 | MS.gene32444:intron | 30.0% | |
| ATTTCTCGTTGACAATTTGT+AGG | - | chr1.4:12344686-12344705 | MS.gene32444:intron | 30.0% | |
| CAAAGAAATAAAACAGGCTT+AGG | + | chr1.4:12342930-12342949 | None:intergenic | 30.0% | |
| CATTAGACTAACCTTCTTAA+TGG | + | chr1.4:12341552-12341571 | None:intergenic | 30.0% | |
| CTATGAATTACAAATACTCC+TGG | - | chr1.4:12341718-12341737 | MS.gene32444:CDS | 30.0% | |
| GCAAGTTTGATGTAAAAAGA+AGG | + | chr1.4:12342606-12342625 | None:intergenic | 30.0% | |
| TACATATGTTTAATACCGGA+GGG | + | chr1.4:12344024-12344043 | None:intergenic | 30.0% | |
| TAGCAAAATTCAAAGTGGTA+AGG | + | chr1.4:12343492-12343511 | None:intergenic | 30.0% | |
| TATAAACCATCACATAGTTG+AGG | + | chr1.4:12342113-12342132 | None:intergenic | 30.0% | |
| TCCAAGGTATATAAAAGCAA+CGG | + | chr1.4:12341852-12341871 | None:intergenic | 30.0% | |
| TGTTTGATCTCTTCTTGATA+TGG | - | chr1.4:12343297-12343316 | MS.gene32444:intron | 30.0% | |
| TTACATATGTTTAATACCGG+AGG | + | chr1.4:12344025-12344044 | None:intergenic | 30.0% | |
| TTCCTAAATTTATGTTTGGC+AGG | - | chr1.4:12344403-12344422 | MS.gene32444:intron | 30.0% | |
| ! | ACAATTTTCACTCTCGATTT+TGG | - | chr1.4:12343680-12343699 | MS.gene32444:intron | 30.0% |
| ! | AGCACATTAGTTTAAAATGG+AGG | - | chr1.4:12342639-12342658 | MS.gene32444:intron | 30.0% |
| ! | AGTTAAGTTTTTGTTCTCTC+TGG | + | chr1.4:12343562-12343581 | None:intergenic | 30.0% |
| ! | ATGCTGACTATTTATATGAC+TGG | - | chr1.4:12344431-12344450 | MS.gene32444:CDS | 30.0% |
| ! | GATAGAGTATTTACATTCCA+AGG | - | chr1.4:12342968-12342987 | MS.gene32444:intron | 30.0% |
| ! | GCACATTAGTTTAAAATGGA+GGG | - | chr1.4:12342640-12342659 | MS.gene32444:intron | 30.0% |
| ! | TATAGTGATGGAATTTAAGG+TGG | - | chr1.4:12342315-12342334 | MS.gene32444:intron | 30.0% |
| ! | TGACAGAAAAGCTGTTATTT+AGG | + | chr1.4:12343370-12343389 | None:intergenic | 30.0% |
| !! | AAAATTGGTAGTGGATCATT+TGG | - | chr1.4:12341393-12341412 | MS.gene32444:CDS | 30.0% |
| !! | CAGGTTTGTATGATTGATTT+TGG | - | chr1.4:12343184-12343203 | MS.gene32444:intron | 30.0% |
| !! | CATTAAGAAGGTTAGTCTAA+TGG | - | chr1.4:12341550-12341569 | MS.gene32444:intron | 30.0% |
| !! | GCAATTTACATGTTGTTTCA+AGG | - | chr1.4:12344281-12344300 | MS.gene32444:CDS | 30.0% |
| !! | GGTAATCATTGATTCATCTA+TGG | - | chr1.4:12342482-12342501 | MS.gene32444:CDS | 30.0% |
| !! | GTTCTAGTTCTTGAACTTAT+GGG | - | chr1.4:12342381-12342400 | MS.gene32444:intron | 30.0% |
| !! | TGTTCTAGTTCTTGAACTTA+TGG | - | chr1.4:12342380-12342399 | MS.gene32444:intron | 30.0% |
| !! | TTCATATTTTTGCATTCTGG+TGG | + | chr1.4:12343932-12343951 | None:intergenic | 30.0% |
| !! | TTCTAGTTCTTGAACTTATG+GGG | - | chr1.4:12342382-12342401 | MS.gene32444:intron | 30.0% |
| !!! | CTGGACGATTTTAAAATATC+AGG | - | chr1.4:12344450-12344469 | MS.gene32444:CDS | 30.0% |
| !!! | TCGGTATAGATTTTTGGTTT+TGG | + | chr1.4:12344908-12344927 | None:intergenic | 30.0% |
| AAAAGTCCTCAACTATGTGA+TGG | - | chr1.4:12342104-12342123 | MS.gene32444:intron | 35.0% | |
| AAACGTTAGACCTGACTATT+TGG | - | chr1.4:12343866-12343885 | MS.gene32444:intron | 35.0% | |
| AAAGTAAGAAGCAAACTCCA+CGG | + | chr1.4:12344127-12344146 | None:intergenic | 35.0% | |
| AAAGTCATTACAACATGCTC+TGG | + | chr1.4:12344842-12344861 | None:intergenic | 35.0% | |
| AAGTGAACAATTCACGAAAC+AGG | + | chr1.4:12344206-12344225 | None:intergenic | 35.0% | |
| AATAACTTTAGCATGCAGAG+AGG | + | chr1.4:12345012-12345031 | None:intergenic | 35.0% | |
| AATGCAACAACCAAATAGTC+AGG | + | chr1.4:12343879-12343898 | None:intergenic | 35.0% | |
| ACACATTCTAGTCACAGTTA+CGG | - | chr1.4:12341881-12341900 | MS.gene32444:CDS | 35.0% | |
| ACTACACAGAGATATCAAAC+CGG | - | chr1.4:12342995-12343014 | MS.gene32444:intron | 35.0% | |
| AGACCCATAAGAAAGTTATC+CGG | + | chr1.4:12343017-12343036 | None:intergenic | 35.0% | |
| AGCAACATCTTTATGATGCA+TGG | + | chr1.4:12343814-12343833 | None:intergenic | 35.0% | |
| AGCAATACTCACAAAGGAAT+TGG | - | chr1.4:12343603-12343622 | MS.gene32444:CDS | 35.0% | |
| AGTCACAGTTACGGTAATAA+TGG | - | chr1.4:12341890-12341909 | MS.gene32444:CDS | 35.0% | |
| ATGGATGAAGCTTAAAGACT+AGG | - | chr1.4:12341979-12341998 | MS.gene32444:intron | 35.0% | |
| ATTGGTAGGAAAATTGGTAG+TGG | - | chr1.4:12341384-12341403 | MS.gene32444:CDS | 35.0% | |
| CAAACCGGATAACTTTCTTA+TGG | - | chr1.4:12343010-12343029 | MS.gene32444:intron | 35.0% | |
| CCAAGGTATATAAAAGCAAC+GGG | + | chr1.4:12341851-12341870 | None:intergenic | 35.0% | |
| CGCTTCAAATATCCATAATC+TGG | + | chr1.4:12344183-12344202 | None:intergenic | 35.0% | |
| CGTGAATTGTTCACTTCTAA+AGG | - | chr1.4:12344210-12344229 | MS.gene32444:CDS | 35.0% | |
| GATAACTTTCTTATGGGTCT+TGG | - | chr1.4:12343017-12343036 | MS.gene32444:CDS | 35.0% | |
| GTACCAAACCATTTCATTCT+TGG | + | chr1.4:12342345-12342364 | None:intergenic | 35.0% | |
| GTGGTATTCCAAGAATGAAA+TGG | - | chr1.4:12342334-12342353 | MS.gene32444:intron | 35.0% | |
| TCAGGAGATTCAACAGATAA+AGG | - | chr1.4:12344468-12344487 | MS.gene32444:intron | 35.0% | |
| TGGACTTTCAAAAGGATACA+GGG | - | chr1.4:12343204-12343223 | MS.gene32444:intron | 35.0% | |
| TTACAAATACTCCTGGGATT+AGG | - | chr1.4:12341725-12341744 | MS.gene32444:CDS | 35.0% | |
| TTGGACTTTCAAAAGGATAC+AGG | - | chr1.4:12343203-12343222 | MS.gene32444:intron | 35.0% | |
| TTTGATCAACGACCAGATTA+TGG | - | chr1.4:12344168-12344187 | MS.gene32444:CDS | 35.0% | |
| ! | GAGGAAAGTATAGAATTGGT+AGG | - | chr1.4:12341370-12341389 | MS.gene32444:CDS | 35.0% |
| ! | GTTGGAGGAAAGTATAGAAT+TGG | - | chr1.4:12341366-12341385 | MS.gene32444:CDS | 35.0% |
| ! | TAGCAACAGCTTGTTTAAGA+TGG | - | chr1.4:12344259-12344278 | MS.gene32444:CDS | 35.0% |
| ! | TCATGTTTTCTGTATGCTGT+TGG | - | chr1.4:12342558-12342577 | MS.gene32444:intron | 35.0% |
| ! | TGGGAAGTTTTCGCTAAAAT+CGG | - | chr1.4:12342437-12342456 | MS.gene32444:CDS | 35.0% |
| !! | ATGAAATGGTTTGGTACTGA+TGG | - | chr1.4:12342348-12342367 | MS.gene32444:intron | 35.0% |
| !! | GCTAAAATCGGTTTTGATGT+TGG | - | chr1.4:12342449-12342468 | MS.gene32444:CDS | 35.0% |
| !! | TATTTTGGGTAGTACATGGA+TGG | - | chr1.4:12341960-12341979 | MS.gene32444:intron | 35.0% |
| AACGTTGACAATCTTGACGA+TGG | - | chr1.4:12344962-12344981 | MS.gene32444:intron | 40.0% | |
| AAGCTATCTGAGAGAGCTTA+TGG | - | chr1.4:12342811-12342830 | MS.gene32444:intron | 40.0% | |
| AAGTAAGAAGCAAACTCCAC+GGG | + | chr1.4:12344126-12344145 | None:intergenic | 40.0% | |
| ACAACCACAGCTACTATATG+AGG | - | chr1.4:12342173-12342192 | MS.gene32444:CDS | 40.0% | |
| ACCTCCTTTACTACTGTAGT+GGG | - | chr1.4:12342418-12342437 | MS.gene32444:CDS | 40.0% | |
| ACGTGTTTGTATGAAGCTCA+GGG | - | chr1.4:12344934-12344953 | MS.gene32444:intron | 40.0% | |
| ACGTTGACAATCTTGACGAT+GGG | - | chr1.4:12344963-12344982 | MS.gene32444:intron | 40.0% | |
| ACTTCCCACTACAGTAGTAA+AGG | + | chr1.4:12342425-12342444 | None:intergenic | 40.0% | |
| ATCTCTGTGTAGTAATCCCT+TGG | + | chr1.4:12342988-12343007 | None:intergenic | 40.0% | |
| CTCTCTGGATGAGTTTATCA+AGG | + | chr1.4:12343547-12343566 | None:intergenic | 40.0% | |
| GAAGTTAAACACTCCCATTG+AGG | - | chr1.4:12343966-12343985 | MS.gene32444:intron | 40.0% | |
| GACAGTGGAAACAGGTAAAT+CGG | + | chr1.4:12345132-12345151 | None:intergenic | 40.0% | |
| GAGTGCATTCCTTCACAATA+CGG | + | chr1.4:12344820-12344839 | None:intergenic | 40.0% | |
| GCAAGTAGCAATACTCACAA+AGG | - | chr1.4:12343597-12343616 | MS.gene32444:CDS | 40.0% | |
| GGATTAGGCATCCTAAGAAT+AGG | - | chr1.4:12341740-12341759 | MS.gene32444:CDS | 40.0% | |
| GGGATATGCTTGTAACTGAT+AGG | + | chr1.4:12343232-12343251 | None:intergenic | 40.0% | |
| GTTACAAGCATATCCCTTAC+AGG | - | chr1.4:12343236-12343255 | MS.gene32444:intron | 40.0% | |
| GTTGATCAAATGTCAAGGAG+CGG | + | chr1.4:12344158-12344177 | None:intergenic | 40.0% | |
| TCTTGGGAAGAAAGCAAATC+AGG | - | chr1.4:12343034-12343053 | MS.gene32444:CDS | 40.0% | |
| TGGTCGTTGATCAAATGTCA+AGG | + | chr1.4:12344163-12344182 | None:intergenic | 40.0% | |
| TTTGATGTTGGCCGATCAAA+TGG | - | chr1.4:12342461-12342480 | MS.gene32444:CDS | 40.0% | |
| TTTGCCTCATATAGTAGCTG+TGG | + | chr1.4:12342180-12342199 | None:intergenic | 40.0% | |
| ! | AACTTTGGTCACCCTTTTCA+TGG | - | chr1.4:12344565-12344584 | MS.gene32444:intron | 40.0% |
| ! | AGAGATGATTTGGAGTCTCT+TGG | - | chr1.4:12343728-12343747 | MS.gene32444:intron | 40.0% |
| ! | ATGTTGCTTGTGACTCTCAA+CGG | - | chr1.4:12343826-12343845 | MS.gene32444:intron | 40.0% |
| ! | GGACGTTCGGTATAGATTTT+TGG | + | chr1.4:12344914-12344933 | None:intergenic | 40.0% |
| !! | AATGTGTTCGAGAGTATCCA+AGG | + | chr1.4:12341868-12341887 | None:intergenic | 40.0% |
| !! | TGTTGCATTTTAGCCTTCCT+TGG | - | chr1.4:12343890-12343909 | MS.gene32444:intron | 40.0% |
| !!! | CCCGTTGCTTTTATATACCT+TGG | - | chr1.4:12341848-12341867 | MS.gene32444:intron | 40.0% |
| AACACTCCCATTGAGGTATG+CGG | - | chr1.4:12343973-12343992 | MS.gene32444:intron | 45.0% | |
| ACATGATCCGCATACCTCAA+TGG | + | chr1.4:12343983-12344002 | None:intergenic | 45.0% | |
| ATGTGGTGCTTCTGATGACT+TGG | - | chr1.4:12345226-12345245 | MS.gene32444:CDS | 45.0% | |
| CACGTGTTTGTATGAAGCTC+AGG | - | chr1.4:12344933-12344952 | MS.gene32444:intron | 45.0% | |
| CATACAAACACGTGGACGTT+CGG | + | chr1.4:12344927-12344946 | None:intergenic | 45.0% | |
| CATGATCCGCATACCTCAAT+GGG | + | chr1.4:12343982-12344001 | None:intergenic | 45.0% | |
| CTGAGCTTCATACAAACACG+TGG | + | chr1.4:12344935-12344954 | None:intergenic | 45.0% | |
| GACCTCCTTTACTACTGTAG+TGG | - | chr1.4:12342417-12342436 | MS.gene32444:CDS | 45.0% | |
| GAGACTCCAAATCATCTCTG+CGG | + | chr1.4:12343727-12343746 | None:intergenic | 45.0% | |
| GGTGTGTTAGGGAGTAAATG+TGG | - | chr1.4:12345209-12345228 | MS.gene32444:CDS | 45.0% | |
| GTTGTCAGACATGTGTTGCA+CGG | + | chr1.4:12341798-12341817 | None:intergenic | 45.0% | |
| TCCAAAACCAGAAACGACTG+TGG | - | chr1.4:12345169-12345188 | MS.gene32444:intron | 45.0% | |
| TCCCACTACAGTAGTAAAGG+AGG | + | chr1.4:12342422-12342441 | None:intergenic | 45.0% | |
| TGAGCTTGTGGCCATTAAGA+AGG | - | chr1.4:12341538-12341557 | MS.gene32444:intron | 45.0% | |
| TGCCTACCAATCTTGAACCA+GGG | - | chr1.4:12344721-12344740 | MS.gene32444:intron | 45.0% | |
| TGGTTCAAGATTGGTAGGCA+CGG | + | chr1.4:12344721-12344740 | None:intergenic | 45.0% | |
| TGTTGTGACTTCTGAGCTTG+TGG | - | chr1.4:12341526-12341545 | MS.gene32444:intron | 45.0% | |
| TGTTTCCACTGTCATGCCTA+CGG | - | chr1.4:12345139-12345158 | MS.gene32444:intron | 45.0% | |
| TTACTCCCTAACACACCATC+CGG | + | chr1.4:12345206-12345225 | None:intergenic | 45.0% | |
| TTCTTAGGATGCCTAATCCC+AGG | + | chr1.4:12341739-12341758 | None:intergenic | 45.0% | |
| ! | TCAACGGTGCACGGTTATTT+TGG | - | chr1.4:12343842-12343861 | MS.gene32444:intron | 45.0% |
| ! | TTTGATGACAGCAGCTTACG+AGG | - | chr1.4:12342946-12342965 | MS.gene32444:intron | 45.0% |
| !! | CATTTTAGCCTTCCTTGGCA+AGG | - | chr1.4:12343895-12343914 | MS.gene32444:intron | 45.0% |
| !! | GATGAAACTCGGTGTAGTGA+AGG | + | chr1.4:12345254-12345273 | None:intergenic | 45.0% |
| !!! | GGTTTTGGAACATCTTCCGT+AGG | + | chr1.4:12345158-12345177 | None:intergenic | 45.0% |
| !!! | TCCACAGTCGTTTCTGGTTT+TGG | + | chr1.4:12345173-12345192 | None:intergenic | 45.0% |
| !! | TGTAAATTTAATTATAATAT+TGG | + | chr1.4:12345054-12345073 | None:intergenic | 5.0% |
| ACTTTGCAAGTCATGTCCCG+TGG | - | chr1.4:12344107-12344126 | MS.gene32444:intron | 50.0% | |
| ATCTTCCGTAGGCATGACAG+TGG | + | chr1.4:12345147-12345166 | None:intergenic | 50.0% | |
| CAAACCCGGATGGTGTGTTA+GGG | - | chr1.4:12345198-12345217 | MS.gene32444:intron | 50.0% | |
| CAATCTTGAACCAGGGGATG+TGG | - | chr1.4:12344728-12344747 | MS.gene32444:intron | 50.0% | |
| CACATCCCCTGGTTCAAGAT+TGG | + | chr1.4:12344730-12344749 | None:intergenic | 50.0% | |
| GACTGTGGAAACCTCAAACC+CGG | - | chr1.4:12345184-12345203 | MS.gene32444:intron | 50.0% | |
| GAGGTTTCCACAGTCGTTTC+TGG | + | chr1.4:12345179-12345198 | None:intergenic | 50.0% | |
| GCAAAGCCGCAGAGATGATT+TGG | - | chr1.4:12343718-12343737 | MS.gene32444:intron | 50.0% | |
| GCCTACCAATCTTGAACCAG+GGG | - | chr1.4:12344722-12344741 | MS.gene32444:intron | 50.0% | |
| GTAGGCATGACAGTGGAAAC+AGG | + | chr1.4:12345140-12345159 | None:intergenic | 50.0% | |
| GTGCCTACCAATCTTGAACC+AGG | - | chr1.4:12344720-12344739 | MS.gene32444:intron | 50.0% | |
| TAAAGGAGGTCGTCGAGACT+CGG | + | chr1.4:12342408-12342427 | None:intergenic | 50.0% | |
| TAACACACCATCCGGGTTTG+AGG | + | chr1.4:12345198-12345217 | None:intergenic | 50.0% | |
| TACTCCCTAACACACCATCC+GGG | + | chr1.4:12345205-12345224 | None:intergenic | 50.0% | |
| TCAAACCCGGATGGTGTGTT+AGG | - | chr1.4:12345197-12345216 | MS.gene32444:intron | 50.0% | |
| TCCCCTGGTTCAAGATTGGT+AGG | + | chr1.4:12344726-12344745 | None:intergenic | 50.0% | |
| TTGTGACTCTCAACGGTGCA+CGG | - | chr1.4:12343833-12343852 | MS.gene32444:intron | 50.0% | |
| AGATTGGTAGGCACGGCAAC+TGG | + | chr1.4:12344714-12344733 | None:intergenic | 55.0% | |
| CTTGCAGACCTTGCCAAGGA+AGG | + | chr1.4:12343906-12343925 | None:intergenic | 55.0% | |
| GGGGATGTGGATGAGCATAC+AGG | - | chr1.4:12344741-12344760 | MS.gene32444:intron | 55.0% | |
| GTATGCTCATCCACATCCCC+TGG | + | chr1.4:12344741-12344760 | None:intergenic | 55.0% | |
| GTGGAAACCTCAAACCCGGA+TGG | - | chr1.4:12345188-12345207 | MS.gene32444:intron | 55.0% | |
| CCCTTGCTACGTACTCCCTC+CGG | - | chr1.4:12344006-12344025 | MS.gene32444:intron | 60.0% | |
| GCAGCTTGCAGACCTTGCCA+AGG | + | chr1.4:12343910-12343929 | None:intergenic | 60.0% | |
| ! | ACCGGAGGGAGTACGTAGCA+AGG | + | chr1.4:12344010-12344029 | None:intergenic | 60.0% |
| ! | CCGGAGGGAGTACGTAGCAA+GGG | + | chr1.4:12344009-12344028 | None:intergenic | 60.0% |
| ! | CGGAGGGAGTACGTAGCAAG+GGG | + | chr1.4:12344008-12344027 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 12341354 | 12345283 | 12341354 | ID=MS.gene32444 |
| chr1.4 | mRNA | 12341354 | 12345283 | 12341354 | ID=MS.gene32444.t1;Parent=MS.gene32444 |
| chr1.4 | exon | 12345208 | 12345283 | 12345208 | ID=MS.gene32444.t1.exon1;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12345208 | 12345283 | 12345208 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12345078 | 12345118 | 12345078 | ID=MS.gene32444.t1.exon2;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12345078 | 12345118 | 12345078 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12344412 | 12344481 | 12344412 | ID=MS.gene32444.t1.exon3;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12344412 | 12344481 | 12344412 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12344155 | 12344303 | 12344155 | ID=MS.gene32444.t1.exon4;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12344155 | 12344303 | 12344155 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12343582 | 12343677 | 12343582 | ID=MS.gene32444.t1.exon5;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12343582 | 12343677 | 12343582 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12343380 | 12343450 | 12343380 | ID=MS.gene32444.t1.exon6;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12343380 | 12343450 | 12343380 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12343013 | 12343074 | 12343013 | ID=MS.gene32444.t1.exon7;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12343013 | 12343074 | 12343013 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12342857 | 12342920 | 12342857 | ID=MS.gene32444.t1.exon8;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12342857 | 12342920 | 12342857 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12342650 | 12342734 | 12342650 | ID=MS.gene32444.t1.exon9;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12342650 | 12342734 | 12342650 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12342406 | 12342532 | 12342406 | ID=MS.gene32444.t1.exon10;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12342406 | 12342532 | 12342406 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12342130 | 12342212 | 12342130 | ID=MS.gene32444.t1.exon11;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12342130 | 12342212 | 12342130 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12341875 | 12341929 | 12341875 | ID=MS.gene32444.t1.exon12;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12341875 | 12341929 | 12341875 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12341634 | 12341761 | 12341634 | ID=MS.gene32444.t1.exon13;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12341634 | 12341761 | 12341634 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| chr1.4 | exon | 12341354 | 12341518 | 12341354 | ID=MS.gene32444.t1.exon14;Parent=MS.gene32444.t1 |
| chr1.4 | CDS | 12341354 | 12341518 | 12341354 | ID=cds.MS.gene32444.t1;Parent=MS.gene32444.t1 |
| Gene Sequence |
| Protein sequence |
