Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45938.t1 | XP_013448606.1 | 93.3 | 436 | 25 | 2 | 1 | 434 | 1 | 434 | 2.20E-226 | 794.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45938.t1 | Q9LFC0 | 43.8 | 377 | 156 | 9 | 1 | 367 | 1 | 331 | 5.6e-69 | 263.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45938.t1 | A0A072U0F7 | 93.3 | 436 | 25 | 2 | 1 | 434 | 1 | 434 | 1.6e-226 | 794.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene45938 | -0.818118 | 2.32E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene45938 | -0.830565 | 2.73E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene45938 | -0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene45938 | -0.812829 | 3.48E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene45938 | -0.833883 | 4.13E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene45938 | -0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene45938 | -0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene45938 | -0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene45938 | -0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene45938 | -0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene45938 | -0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene45938 | -0.811831 | 5.75E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene45938 | -0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene45938 | -0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene45938 | -0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene45938 | -0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene45938 | -0.80168 | 8.03E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene45938 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene45938 | -0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene45938 | -0.818878 | 1.56E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene45938 | -0.807579 | 4.72E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene45938 | -0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene45938 | -0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene45938 | -0.810251 | 1.26E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene45938 | -0.812923 | 3.32E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene45938 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene45938 | -0.807926 | 3.98E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene45938 | -0.816618 | 5.04E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene45938 | -0.826537 | 2.57E-54 | -1.69E-46 |
| MS.gene053054 | MS.gene45938 | 0.84361 | 1.26E-58 | -1.69E-46 |
| MS.gene053166 | MS.gene45938 | -0.8278 | 1.28E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene45938 | -0.824326 | 8.58E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene45938 | -0.82029 | 7.42E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene45938 | 0.848365 | 6.42E-60 | -1.69E-46 |
| MS.gene054467 | MS.gene45938 | -0.821473 | 3.96E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene45938 | -0.8269 | 2.10E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene45938 | -0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene45938 | -0.830598 | 2.68E-55 | -1.69E-46 |
| MS.gene054657 | MS.gene45938 | -0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene45938 | -0.809438 | 1.89E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene45938 | -0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene45938 | -0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene45938 | -0.811461 | 6.92E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene45938 | -0.832057 | 1.17E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene45938 | -0.830855 | 2.32E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene45938 | -0.839924 | 1.18E-57 | -1.69E-46 |
| MS.gene05604 | MS.gene45938 | -0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene45938 | -0.811084 | 8.36E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene45938 | -0.826647 | 2.42E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene45938 | -0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene45938 | -0.823346 | 1.46E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene45938 | -0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene45938 | -0.818284 | 2.12E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene45938 | -0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene45938 | -0.801246 | 9.86E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene45938 | -0.810197 | 1.30E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene45938 | -0.826499 | 2.62E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene45938 | -0.828902 | 6.94E-55 | -1.69E-46 |
| MS.gene059161 | MS.gene45938 | -0.801904 | 7.23E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene45938 | -0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene45938 | -0.803894 | 2.80E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene45938 | 0.86146 | 1.01E-63 | -1.69E-46 |
| MS.gene060322 | MS.gene45938 | -0.836443 | 9.33E-57 | -1.69E-46 |
| MS.gene06052 | MS.gene45938 | -0.824687 | 7.05E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene45938 | -0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene060634 | MS.gene45938 | 0.818003 | 2.46E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene45938 | -0.806496 | 8.00E-50 | -1.69E-46 |
| MS.gene060690 | MS.gene45938 | -0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene45938 | -0.810151 | 1.33E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene45938 | -0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene45938 | -0.817414 | 3.34E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45938.t1 | MTR_7g056183 | 97.018 | 436 | 9 | 2 | 1 | 434 | 1 | 434 | 0.0 | 856 |
| MS.gene45938.t1 | MTR_7g066710 | 95.872 | 436 | 14 | 3 | 1 | 434 | 1 | 434 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45938.t1 | AT5G01160 | 45.270 | 444 | 142 | 16 | 1 | 430 | 1 | 357 | 1.88e-103 | 311 |
| MS.gene45938.t1 | AT5G01160 | 45.270 | 444 | 142 | 16 | 1 | 430 | 1 | 357 | 1.88e-103 | 311 |
Find 160 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATAATTTACTTGAAAATT+TGG | 0.099183 | 7.2:-45137898 | None:intergenic |
| GGGTAACCCATTAATGAATT+TGG | 0.140474 | 7.2:-45137856 | None:intergenic |
| CTTTGATGGTCTGAATCTTC+TGG | 0.197972 | 7.2:-45137177 | None:intergenic |
| CAGCATTGGGTTTGGGTGTG+GGG | 0.211301 | 7.2:-45137719 | None:intergenic |
| TTCAGCATTGGGTTTGGGTG+TGG | 0.242330 | 7.2:-45137721 | None:intergenic |
| TGCTGCATTGCTGGCCTTGA+AGG | 0.252713 | 7.2:-45137481 | None:intergenic |
| GGAACATTGGTGGGTTGTGC+AGG | 0.262651 | 7.2:-45137697 | None:intergenic |
| CCGTCTTCTTTATCTGCATT+GGG | 0.270406 | 7.2:-45137307 | None:intergenic |
| TGGAGACCCAAATTCATTAA+TGG | 0.271048 | 7.2:+45137849 | MS.gene45938:CDS |
| GTGGGTTCAGCATTGGGTTT+GGG | 0.273827 | 7.2:-45137726 | None:intergenic |
| GATAGTCGTGACAGCTTTAA+TGG | 0.284126 | 7.2:+45138120 | MS.gene45938:CDS |
| AGGAACACCTGCTGCATTCC+AGG | 0.286287 | 7.2:-45137926 | None:intergenic |
| TCAGCATTGGGTTTGGGTGT+GGG | 0.290806 | 7.2:-45137720 | None:intergenic |
| ACTTGAAAATTTGGGCCATT+TGG | 0.295474 | 7.2:-45137889 | None:intergenic |
| GGTGGGTTCAGCATTGGGTT+TGG | 0.296312 | 7.2:-45137727 | None:intergenic |
| TCCGTCTTCTTTATCTGCAT+TGG | 0.301508 | 7.2:-45137308 | None:intergenic |
| CTACTGCTTCTTCTGTTGTT+AGG | 0.306448 | 7.2:+45134731 | MS.gene45938:CDS |
| CTTGAAAATTTGGGCCATTT+GGG | 0.308245 | 7.2:-45137888 | None:intergenic |
| GATTCCTTCCATCACTTTGA+TGG | 0.317698 | 7.2:-45137191 | None:intergenic |
| AATGAGGAGCTGCACATATT+AGG | 0.326464 | 7.2:-45137213 | None:intergenic |
| ATGGTTGAGCTCGGTCTTGC+GGG | 0.329657 | 7.2:-45137774 | None:intergenic |
| GAAGATCGGCGTGGAATTCA+TGG | 0.334875 | 7.2:-45137279 | None:intergenic |
| ACCTGCTGCATTCCAGGGCT+GGG | 0.348172 | 7.2:-45137920 | None:intergenic |
| TGGGCCGGAGGTGGTGGTGG+TGG | 0.350803 | 7.2:-45138030 | None:intergenic |
| CACCTGCTGCATTCCAGGGC+TGG | 0.351191 | 7.2:-45137921 | None:intergenic |
| GGTAACCCATTAATGAATTT+GGG | 0.353294 | 7.2:-45137855 | None:intergenic |
| GATAATTTACTTGAAAATTT+GGG | 0.364463 | 7.2:-45137897 | None:intergenic |
| GGTTGTGCAGGGTGCATTGT+TGG | 0.367244 | 7.2:-45137685 | None:intergenic |
| TGAGCTCGGTCTTGCGGGAA+AGG | 0.367370 | 7.2:-45137769 | None:intergenic |
| CTTGAAGGAGCTTGATCTCT+TGG | 0.368073 | 7.2:-45137466 | None:intergenic |
| AAGGGATTCCAAAGGTATAT+TGG | 0.369838 | 7.2:+45137981 | MS.gene45938:CDS |
| GCCGGAGGTGGTGGTGGTGG+TGG | 0.369989 | 7.2:-45138027 | None:intergenic |
| GGCCATTTGGGACCCCTTGT+GGG | 0.369999 | 7.2:-45137876 | None:intergenic |
| GGAGACCCAAATTCATTAAT+GGG | 0.371180 | 7.2:+45137850 | MS.gene45938:CDS |
| CTTCCTGTTGCAAAGGGTAT+TGG | 0.371327 | 7.2:+45134703 | MS.gene45938:CDS |
| GGTGGTGGTGGGAGAGCCAT+GGG | 0.371510 | 7.2:-45138012 | None:intergenic |
| AACATGTGGGCCGGAGGTGG+TGG | 0.373736 | 7.2:-45138036 | None:intergenic |
| GCACAGGTGGGTTCAGCATT+GGG | 0.376338 | 7.2:-45137732 | None:intergenic |
| TCATAGGGAGCAGCATAAAA+TGG | 0.377461 | 7.2:-45137793 | None:intergenic |
| TGGTGGTGGTGGGAGAGCCA+TGG | 0.377827 | 7.2:-45138013 | None:intergenic |
| TACTCAGGAAATGAGTTATC+TGG | 0.380101 | 7.2:-45137661 | None:intergenic |
| GGACATGATGGTCAAGGTTA+TGG | 0.385999 | 7.2:+45138087 | MS.gene45938:CDS |
| ATCTCTTGGTGGTTGGCGAC+GGG | 0.388590 | 7.2:-45137452 | None:intergenic |
| GGTGGGAGAGCCATGGGCTG+TGG | 0.398629 | 7.2:-45138006 | None:intergenic |
| GATCTCTTGGTGGTTGGCGA+CGG | 0.401185 | 7.2:-45137453 | None:intergenic |
| ATGTGGGCCGGAGGTGGTGG+TGG | 0.401538 | 7.2:-45138033 | None:intergenic |
| ATACCTTGTGCTTGTTCAAA+AGG | 0.403352 | 7.2:-45137946 | None:intergenic |
| CAAGAGATCAAGCTCCTTCA+AGG | 0.403818 | 7.2:+45137467 | MS.gene45938:CDS |
| CACCCTTCAGATTCCATGTC+TGG | 0.408210 | 7.2:+45137532 | MS.gene45938:CDS |
| CAGGACTCGTCTTCTGATAT+TGG | 0.415458 | 7.2:+45137826 | MS.gene45938:CDS |
| TCAGCAAGGACCAAGTGGTC+AGG | 0.416666 | 7.2:-45134679 | None:intergenic |
| GAGCTCGGTCTTGCGGGAAA+GGG | 0.418923 | 7.2:-45137768 | None:intergenic |
| TTCAACATGTGGGCCGGAGG+TGG | 0.422807 | 7.2:-45138039 | None:intergenic |
| GTCCTGCCTAGGCATATCAT+AGG | 0.422973 | 7.2:-45137809 | None:intergenic |
| AACTACTATCCTGGTGATCA+TGG | 0.429087 | 7.2:+45138066 | MS.gene45938:CDS |
| ATTGAAATATGCTTCAGATT+CGG | 0.433005 | 7.2:+45134581 | None:intergenic |
| GGCACAGGTGGGTTCAGCAT+TGG | 0.438653 | 7.2:-45137733 | None:intergenic |
| GACATGATGGTCAAGGTTAT+GGG | 0.439128 | 7.2:+45138088 | MS.gene45938:CDS |
| TGCTGATCTTCCTGTTGCAA+AGG | 0.449994 | 7.2:+45134696 | MS.gene45938:CDS |
| GGTTGCCTGCCCTGACCACT+TGG | 0.452783 | 7.2:+45134669 | MS.gene45938:CDS |
| TAAACTGAACAGGTTCTTGT+GGG | 0.455113 | 7.2:-45137615 | None:intergenic |
| GTACCAATACCCTTTGCAAC+AGG | 0.456253 | 7.2:-45134706 | None:intergenic |
| GGGCCATTTGGGACCCCTTG+TGG | 0.457407 | 7.2:-45137877 | None:intergenic |
| TGCCTGTCGGTAAACTGAAC+AGG | 0.458587 | 7.2:-45137625 | None:intergenic |
| GCTGATCTTCCTGTTGCAAA+GGG | 0.461785 | 7.2:+45134697 | MS.gene45938:CDS |
| TCTTCTGTTGTTAGGAATGT+GGG | 0.464732 | 7.2:+45134739 | MS.gene45938:CDS |
| AGCTCGGTCTTGCGGGAAAG+GGG | 0.473849 | 7.2:-45137767 | None:intergenic |
| TTCTGTCGGAGGTATGCAGC+AGG | 0.474582 | 7.2:+45137555 | MS.gene45938:CDS |
| CTGAACCCACCTGTGCCATT+TGG | 0.475075 | 7.2:+45137739 | MS.gene45938:CDS |
| GAACATTGGTGGGTTGTGCA+GGG | 0.476226 | 7.2:-45137696 | None:intergenic |
| AAATTCTCAACATCATGATC+TGG | 0.477320 | 7.2:+45137420 | MS.gene45938:CDS |
| AATATACCTTTGGAATCCCT+TGG | 0.478258 | 7.2:-45137979 | None:intergenic |
| AAGGACCAAGTGGTCAGGGC+AGG | 0.482039 | 7.2:-45134674 | None:intergenic |
| TTCTTCTGTTGTTAGGAATG+TGG | 0.483220 | 7.2:+45134738 | MS.gene45938:CDS |
| AGCATTGGGTTTGGGTGTGG+GGG | 0.486521 | 7.2:-45137718 | None:intergenic |
| CGTAGATCCCGTCGCCAGCT+TGG | 0.487970 | 7.2:+45134763 | MS.gene45938:CDS |
| CCATCCTCTGATGGGTCGGC+AGG | 0.488214 | 7.2:+45134616 | MS.gene45938:CDS |
| GAAGGAGCTTGATCTCTTGG+TGG | 0.489730 | 7.2:-45137463 | None:intergenic |
| CTCGCTCACCAAGCTGGCGA+CGG | 0.489987 | 7.2:-45134771 | None:intergenic |
| AAGTAAATTATCCCCAGCCC+TGG | 0.490191 | 7.2:+45137908 | MS.gene45938:CDS |
| TACCCACAAGGGGTCCCAAA+TGG | 0.492495 | 7.2:+45137874 | MS.gene45938:CDS |
| TTCGGTTTCAACATGTGGGC+CGG | 0.502632 | 7.2:-45138045 | None:intergenic |
| AGTAAGAATCCATCCTCTGA+TGG | 0.503238 | 7.2:+45134607 | MS.gene45938:CDS |
| TGCATTGGGGCGAAGAAGAT+CGG | 0.503512 | 7.2:-45137293 | None:intergenic |
| CTGTGGTGCCAATATACCTT+TGG | 0.504496 | 7.2:-45137989 | None:intergenic |
| TCGCTCACCAAGCTGGCGAC+GGG | 0.507248 | 7.2:-45134770 | None:intergenic |
| CCCCAGCCCTGGAATGCAGC+AGG | 0.510080 | 7.2:+45137919 | MS.gene45938:CDS |
| TGATCACCAGGATAGTAGTT+CGG | 0.511490 | 7.2:-45138063 | None:intergenic |
| GAGCTTGATCTCTTGGTGGT+TGG | 0.512157 | 7.2:-45137459 | None:intergenic |
| AGCCTTCCATAAATCGCAAT+CGG | 0.515681 | 7.2:-45134820 | None:intergenic |
| GCAACCGTAACAGTCTCAAC+AGG | 0.518643 | 7.2:-45134652 | None:intergenic |
| GGGTGCATTGTTGGATACTC+AGG | 0.520311 | 7.2:-45137676 | None:intergenic |
| CCATCATGTCCATGATCACC+AGG | 0.520401 | 7.2:-45138075 | None:intergenic |
| TCCCTATGATATGCCTAGGC+AGG | 0.521544 | 7.2:+45137807 | MS.gene45938:CDS |
| TTGAAACCGAACTACTATCC+TGG | 0.523205 | 7.2:+45138057 | MS.gene45938:CDS |
| AAGGTATGGCTGTGGATCCA+AGG | 0.529270 | 7.2:+45137962 | MS.gene45938:CDS |
| GCCTCGAGCAGTGGAGTCTG+AGG | 0.531560 | 7.2:-45137368 | None:intergenic |
| GGATAACCAAATGGCACAGG+TGG | 0.535200 | 7.2:-45137745 | None:intergenic |
| AATGGTTGAGCTCGGTCTTG+CGG | 0.535415 | 7.2:-45137775 | None:intergenic |
| GACTCGTCTTCTGATATTGG+TGG | 0.536749 | 7.2:+45137829 | MS.gene45938:CDS |
| CAGCAAGGACCAAGTGGTCA+GGG | 0.538041 | 7.2:-45134678 | None:intergenic |
| AATGAACTCGCTCACCAAGC+TGG | 0.540474 | 7.2:-45134777 | None:intergenic |
| GATTGCGATTTATGGAAGGC+TGG | 0.540765 | 7.2:+45134822 | MS.gene45938:CDS |
| AGTAGTTCGGTTTCAACATG+TGG | 0.541723 | 7.2:-45138050 | None:intergenic |
| GGAACACCTGCTGCATTCCA+GGG | 0.546459 | 7.2:-45137925 | None:intergenic |
| CTGCTCCCTATGATATGCCT+AGG | 0.547789 | 7.2:+45137803 | MS.gene45938:CDS |
| CACGCCTGCCGACCCATCAG+AGG | 0.549823 | 7.2:-45134620 | None:intergenic |
| GATTCCATGTCTGGTTCTGT+CGG | 0.551833 | 7.2:+45137541 | MS.gene45938:CDS |
| TTCCGATTGCGATTTATGGA+AGG | 0.551908 | 7.2:+45134818 | MS.gene45938:CDS |
| TGATGTTGAGAATTTGAACC+TGG | 0.554957 | 7.2:-45137412 | None:intergenic |
| ATCGCCTGTTGAGACTGTTA+CGG | 0.555682 | 7.2:+45134648 | MS.gene45938:CDS |
| GATTCAGACCATCAAAGTGA+TGG | 0.557253 | 7.2:+45137183 | MS.gene45938:CDS |
| CGTGACAGCTTTAATGGTCA+AGG | 0.563604 | 7.2:+45138126 | MS.gene45938:CDS |
| TCATTAATGGGTTACCCACA+AGG | 0.563876 | 7.2:+45137862 | MS.gene45938:CDS |
| GTAAGAATCCATCCTCTGAT+GGG | 0.571956 | 7.2:+45134608 | MS.gene45938:CDS |
| AGACAGAAAGCATGGTCACA+AGG | 0.574248 | 7.2:-45135701 | None:intergenic |
| ACCGACAGGCAGCAATCAGT+TGG | 0.574383 | 7.2:+45137637 | MS.gene45938:CDS |
| CGTCTTCTTTATCTGCATTG+GGG | 0.576168 | 7.2:-45137306 | None:intergenic |
| AACTGAACAGGTTCTTGTGG+GGG | 0.577843 | 7.2:-45137613 | None:intergenic |
| AACCTGTTCAGTTTACCGAC+AGG | 0.578186 | 7.2:+45137623 | MS.gene45938:CDS |
| TCAGAAGACGAGTCCTGCCT+AGG | 0.578719 | 7.2:-45137820 | None:intergenic |
| TCCATGTCTGGTTCTGTCGG+AGG | 0.578843 | 7.2:+45137544 | MS.gene45938:CDS |
| CCTGCTGCATTCCAGGGCTG+GGG | 0.580828 | 7.2:-45137919 | None:intergenic |
| GCCTCAGACTCCACTGCTCG+AGG | 0.582998 | 7.2:+45137367 | MS.gene45938:CDS |
| CAGCATAAAATGGTTGAGCT+CGG | 0.584595 | 7.2:-45137783 | None:intergenic |
| CATTAATGGGTTACCCACAA+GGG | 0.586355 | 7.2:+45137863 | MS.gene45938:CDS |
| CCCAATGCAGATAAAGAAGA+CGG | 0.586916 | 7.2:+45137307 | MS.gene45938:CDS |
| ACCTCCGACAGAACCAGACA+TGG | 0.587248 | 7.2:-45137545 | None:intergenic |
| TATATTGGCACCACAGCCCA+TGG | 0.593045 | 7.2:+45137996 | MS.gene45938:CDS |
| GAATCCATCCTCTGATGGGT+CGG | 0.593309 | 7.2:+45134612 | MS.gene45938:CDS |
| CACAATCGAGACAGAAAGCA+TGG | 0.596409 | 7.2:-45135709 | None:intergenic |
| GAACCAGACATGGAATCTGA+AGG | 0.597386 | 7.2:-45137535 | None:intergenic |
| AAACTGAACAGGTTCTTGTG+GGG | 0.598299 | 7.2:-45137614 | None:intergenic |
| GCTCGGTCTTGCGGGAAAGG+GGG | 0.598520 | 7.2:-45137766 | None:intergenic |
| AGGTATGGCTGTGGATCCAA+GGG | 0.599892 | 7.2:+45137963 | MS.gene45938:CDS |
| TCCTGCCTAGGCATATCATA+GGG | 0.602568 | 7.2:-45137808 | None:intergenic |
| CCTGCCGACCCATCAGAGGA+TGG | 0.603028 | 7.2:-45134616 | None:intergenic |
| GGTTTCAACATGTGGGCCGG+AGG | 0.606586 | 7.2:-45138042 | None:intergenic |
| TCCTTGGTACACAGGTGTGA+AGG | 0.607570 | 7.2:+45137148 | MS.gene45938:intron |
| CCTGGTGATCATGGACATGA+TGG | 0.612495 | 7.2:+45138075 | MS.gene45938:CDS |
| ACAAGCACAAGGTATGGCTG+TGG | 0.613276 | 7.2:+45137954 | MS.gene45938:CDS |
| AATCTGAAGGGTGATGTTGT+TGG | 0.613708 | 7.2:-45137522 | None:intergenic |
| GTAAACTGAACAGGTTCTTG+TGG | 0.615838 | 7.2:-45137616 | None:intergenic |
| CAGACCATCAAAGTGATGGA+AGG | 0.617026 | 7.2:+45137187 | MS.gene45938:CDS |
| AAGAATGACTTGAGACAATG+AGG | 0.625934 | 7.2:-45137229 | None:intergenic |
| GCAGTGGAGTCTGAGGCTGT+AGG | 0.627157 | 7.2:-45137361 | None:intergenic |
| AACCAGACATGGAATCTGAA+GGG | 0.638886 | 7.2:-45137534 | None:intergenic |
| ATTAATGGGTTACCCACAAG+GGG | 0.640262 | 7.2:+45137864 | MS.gene45938:CDS |
| GATAACCAAATGGCACAGGT+GGG | 0.645127 | 7.2:-45137744 | None:intergenic |
| ACCAACTGATTGCTGCCTGT+CGG | 0.646600 | 7.2:-45137638 | None:intergenic |
| TCTGTCGGAGGTATGCAGCA+GGG | 0.647007 | 7.2:+45137556 | MS.gene45938:CDS |
| GACAGAAAGCATGGTCACAA+GGG | 0.652892 | 7.2:-45135700 | None:intergenic |
| ACTGAACAGGTTCTTGTGGG+GGG | 0.661044 | 7.2:-45137612 | None:intergenic |
| GTAGTTCGGTTTCAACATGT+GGG | 0.667790 | 7.2:-45138049 | None:intergenic |
| GAAGATCAGCAAGGACCAAG+TGG | 0.668699 | 7.2:-45134684 | None:intergenic |
| GTGGATCCAAGGGATTCCAA+AGG | 0.678283 | 7.2:+45137973 | MS.gene45938:CDS |
| ATGATGGTCAAGGTTATGGG+TGG | 0.681116 | 7.2:+45138091 | MS.gene45938:CDS |
| GATCATGGACATGATGGTCA+AGG | 0.690856 | 7.2:+45138081 | MS.gene45938:CDS |
| TTGCAACAGGAAGATCAGCA+AGG | 0.700122 | 7.2:-45134693 | None:intergenic |
| TGGGGCGAAGAAGATCGGCG+TGG | 0.733508 | 7.2:-45137288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTACTTTACTATAA+TGG | + | chr7.2:45135342-45135361 | MS.gene45938:intron | 10.0% |
| !!! | ATTAAAAAACTTGAATTTTT+GGG | + | chr7.2:45137005-45137024 | MS.gene45938:intron | 10.0% |
| !!! | TATTAAAAAACTTGAATTTT+TGG | + | chr7.2:45137004-45137023 | MS.gene45938:intron | 10.0% |
| !! | ATATTGTTTGTATGTTAAAA+AGG | + | chr7.2:45137114-45137133 | MS.gene45938:intron | 15.0% |
| !! | ATTTATAAAATGATATCAAG+TGG | + | chr7.2:45136472-45136491 | MS.gene45938:intron | 15.0% |
| !! | CTATAAACATTTAATAAAGT+TGG | + | chr7.2:45135128-45135147 | MS.gene45938:intron | 15.0% |
| !! | GATAATTTACTTGAAAATTT+GGG | - | chr7.2:45137900-45137919 | None:intergenic | 15.0% |
| !! | TAGTAAAGTAATATATTTCA+AGG | - | chr7.2:45135339-45135358 | None:intergenic | 15.0% |
| !! | TATTGTTTGTATGTTAAAAA+GGG | + | chr7.2:45137115-45137134 | MS.gene45938:intron | 15.0% |
| !!! | AAAATTTTGATTTTGATAGT+GGG | + | chr7.2:45135593-45135612 | MS.gene45938:intron | 15.0% |
| !!! | TAAAATTTTGATTTTGATAG+TGG | + | chr7.2:45135592-45135611 | MS.gene45938:intron | 15.0% |
| !!! | TAAGATATTTCTATAACAAA+AGG | - | chr7.2:45135075-45135094 | None:intergenic | 15.0% |
| !! | AAAAACTGCATAAGAAAAAA+AGG | - | chr7.2:45135487-45135506 | None:intergenic | 20.0% |
| !! | AAGATAAGAAAAATACTTAC+AGG | - | chr7.2:45135757-45135776 | None:intergenic | 20.0% |
| !! | ATACTAGTAACCTTTATATT+TGG | + | chr7.2:45134943-45134962 | MS.gene45938:intron | 20.0% |
| !! | ATTTACAAAACAACTAAAAG+TGG | - | chr7.2:45135982-45136001 | None:intergenic | 20.0% |
| !! | CATAAACACTTATCATATAA+GGG | - | chr7.2:45135108-45135127 | None:intergenic | 20.0% |
| !! | GGATAATTTACTTGAAAATT+TGG | - | chr7.2:45137901-45137920 | None:intergenic | 20.0% |
| !! | TACTAGTAACCTTTATATTT+GGG | + | chr7.2:45134944-45134963 | MS.gene45938:intron | 20.0% |
| !! | TTTACAAAACAACTAAAAGT+GGG | - | chr7.2:45135981-45136000 | None:intergenic | 20.0% |
| !!! | AGGTGAATAATATTTCTATA+GGG | + | chr7.2:45136072-45136091 | MS.gene45938:intron | 20.0% |
| !!! | TAGGTGAATAATATTTCTAT+AGG | + | chr7.2:45136071-45136090 | MS.gene45938:intron | 20.0% |
| !!! | TATCTATTTTATTGCAAAGT+GGG | - | chr7.2:45136342-45136361 | None:intergenic | 20.0% |
| !!! | TTTGCATTTTATCAGAAATT+TGG | + | chr7.2:45135421-45135440 | MS.gene45938:intron | 20.0% |
| ! | AATATTATTCACCTATTGAC+TGG | - | chr7.2:45136066-45136085 | None:intergenic | 25.0% |
| ! | CAATAAAATAGATACTAGAG+TGG | + | chr7.2:45136348-45136367 | MS.gene45938:intron | 25.0% |
| ! | GCATAAACACTTATCATATA+AGG | - | chr7.2:45135109-45135128 | None:intergenic | 25.0% |
| ! | TCCACTAATAAAAAGCTTAA+TGG | + | chr7.2:45136871-45136890 | MS.gene45938:intron | 25.0% |
| ! | TTACAAAACAACTAAAAGTG+GGG | - | chr7.2:45135980-45135999 | None:intergenic | 25.0% |
| ! | TTTCAAAATTGTATGTCCAT+AGG | - | chr7.2:45136113-45136132 | None:intergenic | 25.0% |
| !! | ACCATTAAGCTTTTTATTAG+TGG | - | chr7.2:45136875-45136894 | None:intergenic | 25.0% |
| !! | ACTAAAGTACTAAACTCTAA+TGG | + | chr7.2:45136820-45136839 | MS.gene45938:intron | 25.0% |
| !! | ATCTATTTTATTGCAAAGTG+GGG | - | chr7.2:45136341-45136360 | None:intergenic | 25.0% |
| !! | GATTATGTTTTGCAATTGAT+AGG | + | chr7.2:45137058-45137077 | MS.gene45938:intron | 25.0% |
| !! | GTATCTATTTTATTGCAAAG+TGG | - | chr7.2:45136343-45136362 | None:intergenic | 25.0% |
| !!! | AGTTTTTTAATATAAGCGTG+TGG | - | chr7.2:45136996-45137015 | None:intergenic | 25.0% |
| !!! | CTAACCTGTTTTTTTCATTT+AGG | + | chr7.2:45134863-45134882 | MS.gene45938:intron | 25.0% |
| !!! | GATTTTAATCTTTGTGAAGA+TGG | - | chr7.2:45136257-45136276 | None:intergenic | 25.0% |
| !!! | TGTTTCTGCAATGAATTTTT+TGG | - | chr7.2:45135190-45135209 | None:intergenic | 25.0% |
| AAAAGTCAACACCAAATCAA+AGG | - | chr7.2:45135302-45135321 | None:intergenic | 30.0% | |
| AAATTCTCAACATCATGATC+TGG | + | chr7.2:45137420-45137439 | MS.gene45938:CDS | 30.0% | |
| AAATTGTATGTCCATAGGAA+AGG | - | chr7.2:45136108-45136127 | None:intergenic | 30.0% | |
| AACCTTTATATTTGGGCTTA+GGG | + | chr7.2:45134951-45134970 | MS.gene45938:intron | 30.0% | |
| CTAGAGTTTGGAAAAAATCT+AGG | + | chr7.2:45136496-45136515 | MS.gene45938:intron | 30.0% | |
| GAAGCCTAAATGAAAAAAAC+AGG | - | chr7.2:45134870-45134889 | None:intergenic | 30.0% | |
| GGTAACCCATTAATGAATTT+GGG | - | chr7.2:45137858-45137877 | None:intergenic | 30.0% | |
| TAACCTTTATATTTGGGCTT+AGG | + | chr7.2:45134950-45134969 | MS.gene45938:intron | 30.0% | |
| TTAGAATGATGACTCAACAA+GGG | - | chr7.2:45136183-45136202 | None:intergenic | 30.0% | |
| TTTACTCAGTTAGTTCAGTT+AGG | - | chr7.2:45136689-45136708 | None:intergenic | 30.0% | |
| ! | ACCATTTTCATCTATTCAAG+TGG | - | chr7.2:45136283-45136302 | None:intergenic | 30.0% |
| ! | CCATTTTCATCTATTCAAGT+GGG | - | chr7.2:45136282-45136301 | None:intergenic | 30.0% |
| ! | CTTTTCATTTTCCAGTCAAT+AGG | + | chr7.2:45136052-45136071 | MS.gene45938:intron | 30.0% |
| ! | TAACATCTAGAACTCTAAAC+AGG | - | chr7.2:45135521-45135540 | None:intergenic | 30.0% |
| ! | TATATCTGAGACAAAACACA+AGG | - | chr7.2:45136403-45136422 | None:intergenic | 30.0% |
| ! | TGAGTCTTATGACTTATGAT+AGG | - | chr7.2:45136646-45136665 | None:intergenic | 30.0% |
| !! | GCTGAAGAACTTTTTGTTTA+AGG | + | chr7.2:45136442-45136461 | MS.gene45938:intron | 30.0% |
| !!! | AATTTTTTGGAGTGAACACA+TGG | - | chr7.2:45135177-45135196 | None:intergenic | 30.0% |
| !!! | GAAAAAAAGGTGTTTTGATG+CGG | - | chr7.2:45135474-45135493 | None:intergenic | 30.0% |
| AACCCTAAGCCCAAATATAA+AGG | - | chr7.2:45134956-45134975 | None:intergenic | 35.0% | |
| AACCTTAATGTTGACCTTCA+GGG | + | chr7.2:45137036-45137055 | MS.gene45938:intron | 35.0% | |
| AAGAATGACTTGAGACAATG+AGG | - | chr7.2:45137232-45137251 | None:intergenic | 35.0% | |
| ACTTGAAAATTTGGGCCATT+TGG | - | chr7.2:45137892-45137911 | None:intergenic | 35.0% | |
| AGTTACACTTACATGTCTGT+GGG | + | chr7.2:45136230-45136249 | MS.gene45938:intron | 35.0% | |
| ATACCTTGTGCTTGTTCAAA+AGG | - | chr7.2:45137949-45137968 | None:intergenic | 35.0% | |
| ATTCTAACCTGACATGTTGA+GGG | + | chr7.2:45136196-45136215 | MS.gene45938:intron | 35.0% | |
| CAAGGAAACTAACAAGTTCT+AGG | - | chr7.2:45135645-45135664 | None:intergenic | 35.0% | |
| CCCACTTGAATAGATGAAAA+TGG | + | chr7.2:45136279-45136298 | MS.gene45938:intron | 35.0% | |
| CTTGAAAATTTGGGCCATTT+GGG | - | chr7.2:45137891-45137910 | None:intergenic | 35.0% | |
| GAAAAGATAACTTCTACCCA+TGG | - | chr7.2:45137086-45137105 | None:intergenic | 35.0% | |
| GGAGACCCAAATTCATTAAT+GGG | + | chr7.2:45137850-45137869 | MS.gene45938:CDS | 35.0% | |
| GGGTAACCCATTAATGAATT+TGG | - | chr7.2:45137859-45137878 | None:intergenic | 35.0% | |
| GTTAGAATGATGACTCAACA+AGG | - | chr7.2:45136184-45136203 | None:intergenic | 35.0% | |
| GTTGCATTATGCATGCTTTA+AGG | + | chr7.2:45136926-45136945 | MS.gene45938:intron | 35.0% | |
| TAAACTGAACAGGTTCTTGT+GGG | - | chr7.2:45137618-45137637 | None:intergenic | 35.0% | |
| TACTCAGGAAATGAGTTATC+TGG | - | chr7.2:45137664-45137683 | None:intergenic | 35.0% | |
| TAGAATGATGACTCAACAAG+GGG | - | chr7.2:45136182-45136201 | None:intergenic | 35.0% | |
| TAGTTACACTTACATGTCTG+TGG | + | chr7.2:45136229-45136248 | MS.gene45938:intron | 35.0% | |
| TCTATTGACATAAGCTCTCT+AGG | + | chr7.2:45135002-45135021 | MS.gene45938:intron | 35.0% | |
| TCTTCTGTTGTTAGGAATGT+GGG | + | chr7.2:45134739-45134758 | MS.gene45938:CDS | 35.0% | |
| TGATGTTGAGAATTTGAACC+TGG | - | chr7.2:45137415-45137434 | None:intergenic | 35.0% | |
| TGCTAAAGAACAAAACCACA+AGG | - | chr7.2:45135368-45135387 | None:intergenic | 35.0% | |
| TGCTAATTACTTAAGCAGTG+AGG | + | chr7.2:45135837-45135856 | MS.gene45938:intron | 35.0% | |
| TGGAGAAAAAACTTGCCTTT+GGG | - | chr7.2:45137395-45137414 | None:intergenic | 35.0% | |
| TGGAGACCCAAATTCATTAA+TGG | + | chr7.2:45137849-45137868 | MS.gene45938:CDS | 35.0% | |
| TTCTTCTGTTGTTAGGAATG+TGG | + | chr7.2:45134738-45134757 | MS.gene45938:CDS | 35.0% | |
| TTGCAAAACATAATCCCTGA+AGG | - | chr7.2:45137053-45137072 | None:intergenic | 35.0% | |
| TTGCAATTGATAGGTTCCAT+GGG | + | chr7.2:45137067-45137086 | MS.gene45938:intron | 35.0% | |
| TTTATCACGAAAGAGCCTAT+TGG | - | chr7.2:45136952-45136971 | None:intergenic | 35.0% | |
| TTTGCAATTGATAGGTTCCA+TGG | + | chr7.2:45137066-45137085 | MS.gene45938:intron | 35.0% | |
| ! | AAAGGGTTTTTCATCTTCCT+TGG | + | chr7.2:45137132-45137151 | MS.gene45938:intron | 35.0% |
| ! | AAGGGATTCCAAAGGTATAT+TGG | + | chr7.2:45137981-45138000 | MS.gene45938:CDS | 35.0% |
| ! | ACTTTACTATAATGGCCTTG+TGG | + | chr7.2:45135350-45135369 | MS.gene45938:intron | 35.0% |
| ! | ATATCAAGTGGTCTAGAGTT+TGG | + | chr7.2:45136484-45136503 | MS.gene45938:intron | 35.0% |
| ! | CTTGTTAGTTTCCTTGATGT+TGG | + | chr7.2:45135649-45135668 | MS.gene45938:intron | 35.0% |
| ! | GATTTTCCGATTGCGATTTA+TGG | + | chr7.2:45134814-45134833 | MS.gene45938:CDS | 35.0% |
| ! | TTTTGAACAAGCACAAGGTA+TGG | + | chr7.2:45137948-45137967 | MS.gene45938:CDS | 35.0% |
| !! | AATATACCTTTGGAATCCCT+TGG | - | chr7.2:45137982-45138001 | None:intergenic | 35.0% |
| !! | AGCTTTTTATTAGTGGACAC+TGG | - | chr7.2:45136868-45136887 | None:intergenic | 35.0% |
| !! | CTTGATGTTGGCTTACTATA+GGG | + | chr7.2:45135661-45135680 | MS.gene45938:intron | 35.0% |
| !!! | GCTTGGTTTGTTTTGTGATT+TGG | + | chr7.2:45135559-45135578 | MS.gene45938:intron | 35.0% |
| AAAACAAACCAAGCCACCTT+TGG | - | chr7.2:45135553-45135572 | None:intergenic | 40.0% | |
| AAACTGAACAGGTTCTTGTG+GGG | - | chr7.2:45137617-45137636 | None:intergenic | 40.0% | |
| AACCAGACATGGAATCTGAA+GGG | - | chr7.2:45137537-45137556 | None:intergenic | 40.0% | |
| AACTACTATCCTGGTGATCA+TGG | + | chr7.2:45138066-45138085 | MS.gene45938:CDS | 40.0% | |
| AATCTGAAGGGTGATGTTGT+TGG | - | chr7.2:45137525-45137544 | None:intergenic | 40.0% | |
| AATGAGGAGCTGCACATATT+AGG | - | chr7.2:45137216-45137235 | None:intergenic | 40.0% | |
| AATGTGCTGAACTCCATTCA+TGG | - | chr7.2:45136777-45136796 | None:intergenic | 40.0% | |
| AGCCTTCCATAAATCGCAAT+CGG | - | chr7.2:45134823-45134842 | None:intergenic | 40.0% | |
| AGTAAGAATCCATCCTCTGA+TGG | + | chr7.2:45134607-45134626 | MS.gene45938:CDS | 40.0% | |
| AGTAGTTCGGTTTCAACATG+TGG | - | chr7.2:45138053-45138072 | None:intergenic | 40.0% | |
| ATCCCTGAAGGTCAACATTA+AGG | - | chr7.2:45137041-45137060 | None:intergenic | 40.0% | |
| ATTGCTGGGCAGTAATTTAG+TGG | + | chr7.2:45135244-45135263 | MS.gene45938:intron | 40.0% | |
| CAACCTTAATGTTGACCTTC+AGG | + | chr7.2:45137035-45137054 | MS.gene45938:intron | 40.0% | |
| CACCAAATCAAAGGCAAACA+AGG | - | chr7.2:45135293-45135312 | None:intergenic | 40.0% | |
| CAGCATAAAATGGTTGAGCT+CGG | - | chr7.2:45137786-45137805 | None:intergenic | 40.0% | |
| CATTCTAACCTGACATGTTG+AGG | + | chr7.2:45136195-45136214 | MS.gene45938:intron | 40.0% | |
| CCCAATGCAGATAAAGAAGA+CGG | + | chr7.2:45137307-45137326 | MS.gene45938:CDS | 40.0% | |
| CCGTCTTCTTTATCTGCATT+GGG | - | chr7.2:45137310-45137329 | None:intergenic | 40.0% | |
| CCTATAGTAAGCCAACATCA+AGG | - | chr7.2:45135663-45135682 | None:intergenic | 40.0% | |
| CGTCTTCTTTATCTGCATTG+GGG | - | chr7.2:45137309-45137328 | None:intergenic | 40.0% | |
| CTACTGCTTCTTCTGTTGTT+AGG | + | chr7.2:45134731-45134750 | MS.gene45938:CDS | 40.0% | |
| CTGGAGAAAAAACTTGCCTT+TGG | - | chr7.2:45137396-45137415 | None:intergenic | 40.0% | |
| GAAAATGGTGTCCATGCTAT+TGG | + | chr7.2:45136294-45136313 | MS.gene45938:intron | 40.0% | |
| GACATGATGGTCAAGGTTAT+GGG | + | chr7.2:45138088-45138107 | MS.gene45938:CDS | 40.0% | |
| GAGAAAAAACTTGCCTTTGG+GGG | - | chr7.2:45137393-45137412 | None:intergenic | 40.0% | |
| GATGCGTTAAACCTTTCCTA+TGG | + | chr7.2:45136094-45136113 | MS.gene45938:intron | 40.0% | |
| GATTCAGACCATCAAAGTGA+TGG | + | chr7.2:45137183-45137202 | MS.gene45938:CDS | 40.0% | |
| GATTCCTTCCATCACTTTGA+TGG | - | chr7.2:45137194-45137213 | None:intergenic | 40.0% | |
| GCAAGTGTAAGAACCATGAA+TGG | + | chr7.2:45136761-45136780 | MS.gene45938:intron | 40.0% | |
| GCAGTAATTTAGTGGAGTAG+TGG | + | chr7.2:45135252-45135271 | MS.gene45938:intron | 40.0% | |
| GCTTCAAAGCTAAGAGTCAA+TGG | - | chr7.2:45135809-45135828 | None:intergenic | 40.0% | |
| GGAGAAAAAACTTGCCTTTG+GGG | - | chr7.2:45137394-45137413 | None:intergenic | 40.0% | |
| GTAAACTGAACAGGTTCTTG+TGG | - | chr7.2:45137619-45137638 | None:intergenic | 40.0% | |
| GTAAGAATCCATCCTCTGAT+GGG | + | chr7.2:45134608-45134627 | MS.gene45938:CDS | 40.0% | |
| GTAGTTCGGTTTCAACATGT+GGG | - | chr7.2:45138052-45138071 | None:intergenic | 40.0% | |
| TCAACAAGGGGAAAAGTAGA+GGG | - | chr7.2:45136170-45136189 | None:intergenic | 40.0% | |
| TCATAGGGAGCAGCATAAAA+TGG | - | chr7.2:45137796-45137815 | None:intergenic | 40.0% | |
| TCCGTCTTCTTTATCTGCAT+TGG | - | chr7.2:45137311-45137330 | None:intergenic | 40.0% | |
| TGATCACCAGGATAGTAGTT+CGG | - | chr7.2:45138066-45138085 | None:intergenic | 40.0% | |
| TGATGTTGTTGGCCGAAAAA+TGG | - | chr7.2:45137514-45137533 | None:intergenic | 40.0% | |
| TTCCGATTGCGATTTATGGA+AGG | + | chr7.2:45134818-45134837 | MS.gene45938:CDS | 40.0% | |
| TTGAAACCGAACTACTATCC+TGG | + | chr7.2:45138057-45138076 | MS.gene45938:CDS | 40.0% | |
| TTTCATCTTCCTTGGTACAC+AGG | + | chr7.2:45137140-45137159 | MS.gene45938:intron | 40.0% | |
| ! | ATTTGGGCTTAGGGTTTGTT+TGG | + | chr7.2:45134960-45134979 | MS.gene45938:intron | 40.0% |
| ! | CTTTGATGGTCTGAATCTTC+TGG | - | chr7.2:45137180-45137199 | None:intergenic | 40.0% |
| ! | GATAGTCGTGACAGCTTTAA+TGG | + | chr7.2:45138120-45138139 | MS.gene45938:CDS | 40.0% |
| ! | GTCCTTGTTTGCCTTTGATT+TGG | + | chr7.2:45135288-45135307 | MS.gene45938:intron | 40.0% |
| ! | GTTCCTTTTGAACAAGCACA+AGG | + | chr7.2:45137943-45137962 | MS.gene45938:CDS | 40.0% |
| !! | ATGCATGCTTTAAGGCCAAT+AGG | + | chr7.2:45136934-45136953 | MS.gene45938:intron | 40.0% |
| !! | ATTAATGGGTTACCCACAAG+GGG | + | chr7.2:45137864-45137883 | MS.gene45938:CDS | 40.0% |
| !! | CAGCAAAAGCCACCATTTTT+CGG | + | chr7.2:45137499-45137518 | MS.gene45938:CDS | 40.0% |
| !! | CATTAATGGGTTACCCACAA+GGG | + | chr7.2:45137863-45137882 | MS.gene45938:CDS | 40.0% |
| !! | CCTTGATGTTGGCTTACTAT+AGG | + | chr7.2:45135660-45135679 | MS.gene45938:intron | 40.0% |
| !! | TCATTAATGGGTTACCCACA+AGG | + | chr7.2:45137862-45137881 | MS.gene45938:CDS | 40.0% |
| !!! | CAAAGGCAAGTTTTTTCTCC+AGG | + | chr7.2:45137394-45137413 | MS.gene45938:CDS | 40.0% |
| AACCTGTTCAGTTTACCGAC+AGG | + | chr7.2:45137623-45137642 | MS.gene45938:CDS | 45.0% | |
| AACTGAACAGGTTCTTGTGG+GGG | - | chr7.2:45137616-45137635 | None:intergenic | 45.0% | |
| AAGCATGCTAGCTGAATTGC+TGG | + | chr7.2:45135229-45135248 | MS.gene45938:intron | 45.0% | |
| AAGTAAATTATCCCCAGCCC+TGG | + | chr7.2:45137908-45137927 | MS.gene45938:CDS | 45.0% | |
| ACAGCCTTACACTTGCACAT+AGG | - | chr7.2:45136908-45136927 | None:intergenic | 45.0% | |
| AGCATGCGAACAAGACGATT+AGG | - | chr7.2:45135897-45135916 | None:intergenic | 45.0% | |
| AGCATGCTAGCTGAATTGCT+GGG | + | chr7.2:45135230-45135249 | MS.gene45938:intron | 45.0% | |
| ATCGCCTGTTGAGACTGTTA+CGG | + | chr7.2:45134648-45134667 | MS.gene45938:CDS | 45.0% | |
| ATGATGGTCAAGGTTATGGG+TGG | + | chr7.2:45138091-45138110 | MS.gene45938:CDS | 45.0% | |
| CAAGAGATCAAGCTCCTTCA+AGG | + | chr7.2:45137467-45137486 | MS.gene45938:CDS | 45.0% | |
| CACAATCGAGACAGAAAGCA+TGG | - | chr7.2:45135712-45135731 | None:intergenic | 45.0% | |
| CAGGACTCGTCTTCTGATAT+TGG | + | chr7.2:45137826-45137845 | MS.gene45938:CDS | 45.0% | |
| CATTTAGGCTTCTGCTTGCT+AGG | + | chr7.2:45134878-45134897 | MS.gene45938:intron | 45.0% | |
| CGAACAAGACGATTAGGACA+CGG | - | chr7.2:45135891-45135910 | None:intergenic | 45.0% | |
| CTACATGCATGCCAATAGCA+TGG | - | chr7.2:45136308-45136327 | None:intergenic | 45.0% | |
| CTCAACAAGGGGAAAAGTAG+AGG | - | chr7.2:45136171-45136190 | None:intergenic | 45.0% | |
| CTTGAAGGAGCTTGATCTCT+TGG | - | chr7.2:45137469-45137488 | None:intergenic | 45.0% | |
| GAACCAGACATGGAATCTGA+AGG | - | chr7.2:45137538-45137557 | None:intergenic | 45.0% | |
| GACTCGTCTTCTGATATTGG+TGG | + | chr7.2:45137829-45137848 | MS.gene45938:CDS | 45.0% | |
| GATAACCAAATGGCACAGGT+GGG | - | chr7.2:45137747-45137766 | None:intergenic | 45.0% | |
| GATCATGGACATGATGGTCA+AGG | + | chr7.2:45138081-45138100 | MS.gene45938:CDS | 45.0% | |
| GATTGCGATTTATGGAAGGC+TGG | + | chr7.2:45134822-45134841 | MS.gene45938:CDS | 45.0% | |
| GCTGATCTTCCTGTTGCAAA+GGG | + | chr7.2:45134697-45134716 | MS.gene45938:CDS | 45.0% | |
| GGACATGATGGTCAAGGTTA+TGG | + | chr7.2:45138087-45138106 | MS.gene45938:CDS | 45.0% | |
| GTACCAATACCCTTTGCAAC+AGG | - | chr7.2:45134709-45134728 | None:intergenic | 45.0% | |
| TCCTGCCTAGGCATATCATA+GGG | - | chr7.2:45137811-45137830 | None:intergenic | 45.0% | |
| TGAGCCTATGTGCAAGTGTA+AGG | + | chr7.2:45136901-45136920 | MS.gene45938:intron | 45.0% | |
| TGCTGATCTTCCTGTTGCAA+AGG | + | chr7.2:45134696-45134715 | MS.gene45938:CDS | 45.0% | |
| TGTTGTTGGCCGAAAAATGG+TGG | - | chr7.2:45137511-45137530 | None:intergenic | 45.0% | |
| TTGCAACAGGAAGATCAGCA+AGG | - | chr7.2:45134696-45134715 | None:intergenic | 45.0% | |
| ! | AGACAGAAAGCATGGTCACA+AGG | - | chr7.2:45135704-45135723 | None:intergenic | 45.0% |
| ! | CAGACCATCAAAGTGATGGA+AGG | + | chr7.2:45137187-45137206 | MS.gene45938:CDS | 45.0% |
| ! | CGTGACAGCTTTAATGGTCA+AGG | + | chr7.2:45138126-45138145 | MS.gene45938:CDS | 45.0% |
| ! | CTGTGGTGCCAATATACCTT+TGG | - | chr7.2:45137992-45138011 | None:intergenic | 45.0% |
| ! | CTTCCTGTTGCAAAGGGTAT+TGG | + | chr7.2:45134703-45134722 | MS.gene45938:CDS | 45.0% |
| ! | GACAGAAAGCATGGTCACAA+GGG | - | chr7.2:45135703-45135722 | None:intergenic | 45.0% |
| !! | GATTCCATGTCTGGTTCTGT+CGG | + | chr7.2:45137541-45137560 | MS.gene45938:CDS | 45.0% |
| AAAGCCTCCCTCAACATGTC+AGG | - | chr7.2:45136206-45136225 | None:intergenic | 50.0% | |
| AAGGTATGGCTGTGGATCCA+AGG | + | chr7.2:45137962-45137981 | MS.gene45938:CDS | 50.0% | |
| AATGAACTCGCTCACCAAGC+TGG | - | chr7.2:45134780-45134799 | None:intergenic | 50.0% | |
| AATGGTTGAGCTCGGTCTTG+CGG | - | chr7.2:45137778-45137797 | None:intergenic | 50.0% | |
| ACAAACCAAGCCACCTTTGG+AGG | - | chr7.2:45135550-45135569 | None:intergenic | 50.0% | |
| ACAAGCACAAGGTATGGCTG+TGG | + | chr7.2:45137954-45137973 | MS.gene45938:CDS | 50.0% | |
| ACCAACTGATTGCTGCCTGT+CGG | - | chr7.2:45137641-45137660 | None:intergenic | 50.0% | |
| ACTGAACAGGTTCTTGTGGG+GGG | - | chr7.2:45137615-45137634 | None:intergenic | 50.0% | |
| AGGTATGGCTGTGGATCCAA+GGG | + | chr7.2:45137963-45137982 | MS.gene45938:CDS | 50.0% | |
| CACCCTTCAGATTCCATGTC+TGG | + | chr7.2:45137532-45137551 | MS.gene45938:CDS | 50.0% | |
| CCATCATGTCCATGATCACC+AGG | - | chr7.2:45138078-45138097 | None:intergenic | 50.0% | |
| CCTGGTGATCATGGACATGA+TGG | + | chr7.2:45138075-45138094 | MS.gene45938:CDS | 50.0% | |
| CTAACCTGACATGTTGAGGG+AGG | + | chr7.2:45136199-45136218 | MS.gene45938:intron | 50.0% | |
| CTGCTCCCTATGATATGCCT+AGG | + | chr7.2:45137803-45137822 | MS.gene45938:CDS | 50.0% | |
| GAAGATCAGCAAGGACCAAG+TGG | - | chr7.2:45134687-45134706 | None:intergenic | 50.0% | |
| GAAGATCGGCGTGGAATTCA+TGG | - | chr7.2:45137282-45137301 | None:intergenic | 50.0% | |
| GAAGGAGCTTGATCTCTTGG+TGG | - | chr7.2:45137466-45137485 | None:intergenic | 50.0% | |
| GATGTTATGCACGCCTCCAA+AGG | + | chr7.2:45135534-45135553 | MS.gene45938:intron | 50.0% | |
| GCAACCGTAACAGTCTCAAC+AGG | - | chr7.2:45134655-45134674 | None:intergenic | 50.0% | |
| GGATAACCAAATGGCACAGG+TGG | - | chr7.2:45137748-45137767 | None:intergenic | 50.0% | |
| GGGAAAGGGGGATAACCAAA+TGG | - | chr7.2:45137757-45137776 | None:intergenic | 50.0% | |
| GGGTGCATTGTTGGATACTC+AGG | - | chr7.2:45137679-45137698 | None:intergenic | 50.0% | |
| GTCCTGCCTAGGCATATCAT+AGG | - | chr7.2:45137812-45137831 | None:intergenic | 50.0% | |
| GTGGATCCAAGGGATTCCAA+AGG | + | chr7.2:45137973-45137992 | MS.gene45938:CDS | 50.0% | |
| TATATTGGCACCACAGCCCA+TGG | + | chr7.2:45137996-45138015 | MS.gene45938:CDS | 50.0% | |
| TCAGTTAGGCTGAGTCAGCT+AGG | - | chr7.2:45136675-45136694 | None:intergenic | 50.0% | |
| TCCCTATGATATGCCTAGGC+AGG | + | chr7.2:45137807-45137826 | MS.gene45938:CDS | 50.0% | |
| TCCTTCACACCTGTGTACCA+AGG | - | chr7.2:45137152-45137171 | None:intergenic | 50.0% | |
| TCCTTGGTACACAGGTGTGA+AGG | + | chr7.2:45137148-45137167 | MS.gene45938:intron | 50.0% | |
| TGCATTGGGGCGAAGAAGAT+CGG | - | chr7.2:45137296-45137315 | None:intergenic | 50.0% | |
| TGCCTGTCGGTAAACTGAAC+AGG | - | chr7.2:45137628-45137647 | None:intergenic | 50.0% | |
| TTCGGTTTCAACATGTGGGC+CGG | - | chr7.2:45138048-45138067 | None:intergenic | 50.0% | |
| ! | GAATCCATCCTCTGATGGGT+CGG | + | chr7.2:45134612-45134631 | MS.gene45938:CDS | 50.0% |
| ! | GAGCTTGATCTCTTGGTGGT+TGG | - | chr7.2:45137462-45137481 | None:intergenic | 50.0% |
| ! | GTGGGTTCAGCATTGGGTTT+GGG | - | chr7.2:45137729-45137748 | None:intergenic | 50.0% |
| ! | TAGGCTTCTGCTTGCTAGGA+TGG | + | chr7.2:45134882-45134901 | MS.gene45938:intron | 50.0% |
| ! | TCAGCATTGGGTTTGGGTGT+GGG | - | chr7.2:45137723-45137742 | None:intergenic | 50.0% |
| ! | TTCAGCATTGGGTTTGGGTG+TGG | - | chr7.2:45137724-45137743 | None:intergenic | 50.0% |
| !! | GAACATTGGTGGGTTGTGCA+GGG | - | chr7.2:45137699-45137718 | None:intergenic | 50.0% |
| ACCGACAGGCAGCAATCAGT+TGG | + | chr7.2:45137637-45137656 | MS.gene45938:CDS | 55.0% | |
| ACCTCCGACAGAACCAGACA+TGG | - | chr7.2:45137548-45137567 | None:intergenic | 55.0% | |
| ACGATTAGGACACGGAGCAG+TGG | - | chr7.2:45135883-45135902 | None:intergenic | 55.0% | |
| AGGAACACCTGCTGCATTCC+AGG | - | chr7.2:45137929-45137948 | None:intergenic | 55.0% | |
| ATGGTTGAGCTCGGTCTTGC+GGG | - | chr7.2:45137777-45137796 | None:intergenic | 55.0% | |
| CAGCAAGGACCAAGTGGTCA+GGG | - | chr7.2:45134681-45134700 | None:intergenic | 55.0% | |
| GGAACACCTGCTGCATTCCA+GGG | - | chr7.2:45137928-45137947 | None:intergenic | 55.0% | |
| GGGGGATAACCAAATGGCAC+AGG | - | chr7.2:45137751-45137770 | None:intergenic | 55.0% | |
| GGTTGTGCAGGGTGCATTGT+TGG | - | chr7.2:45137688-45137707 | None:intergenic | 55.0% | |
| GTTATGCACGCCTCCAAAGG+TGG | + | chr7.2:45135537-45135556 | MS.gene45938:intron | 55.0% | |
| GTTTGGGTGTGGGGGAACAT+TGG | - | chr7.2:45137713-45137732 | None:intergenic | 55.0% | |
| TACCCACAAGGGGTCCCAAA+TGG | + | chr7.2:45137874-45137893 | MS.gene45938:CDS | 55.0% | |
| TCAGAAGACGAGTCCTGCCT+AGG | - | chr7.2:45137823-45137842 | None:intergenic | 55.0% | |
| TCAGCAAGGACCAAGTGGTC+AGG | - | chr7.2:45134682-45134701 | None:intergenic | 55.0% | |
| ! | AGCATTGGGTTTGGGTGTGG+GGG | - | chr7.2:45137721-45137740 | None:intergenic | 55.0% |
| ! | ATCTCTTGGTGGTTGGCGAC+GGG | - | chr7.2:45137455-45137474 | None:intergenic | 55.0% |
| ! | CAGCATTGGGTTTGGGTGTG+GGG | - | chr7.2:45137722-45137741 | None:intergenic | 55.0% |
| ! | CTGAACCCACCTGTGCCATT+TGG | + | chr7.2:45137739-45137758 | MS.gene45938:CDS | 55.0% |
| ! | GATCTCTTGGTGGTTGGCGA+CGG | - | chr7.2:45137456-45137475 | None:intergenic | 55.0% |
| ! | GCACAGGTGGGTTCAGCATT+GGG | - | chr7.2:45137735-45137754 | None:intergenic | 55.0% |
| ! | GGTGGCTTTTGCTGCATTGC+TGG | - | chr7.2:45137493-45137512 | None:intergenic | 55.0% |
| ! | GGTGGGTTCAGCATTGGGTT+TGG | - | chr7.2:45137730-45137749 | None:intergenic | 55.0% |
| ! | TCTGTCGGAGGTATGCAGCA+GGG | + | chr7.2:45137556-45137575 | MS.gene45938:CDS | 55.0% |
| ! | TTCTGTCGGAGGTATGCAGC+AGG | + | chr7.2:45137555-45137574 | MS.gene45938:CDS | 55.0% |
| !! | GGAACATTGGTGGGTTGTGC+AGG | - | chr7.2:45137700-45137719 | None:intergenic | 55.0% |
| !! | TCCATGTCTGGTTCTGTCGG+AGG | + | chr7.2:45137544-45137563 | MS.gene45938:CDS | 55.0% |
| !! | TGCTGCATTGCTGGCCTTGA+AGG | - | chr7.2:45137484-45137503 | None:intergenic | 55.0% |
| AAGGACCAAGTGGTCAGGGC+AGG | - | chr7.2:45134677-45134696 | None:intergenic | 60.0% | |
| ACCTGCTGCATTCCAGGGCT+GGG | - | chr7.2:45137923-45137942 | None:intergenic | 60.0% | |
| AGCTCGGTCTTGCGGGAAAG+GGG | - | chr7.2:45137770-45137789 | None:intergenic | 60.0% | |
| GAGCTCGGTCTTGCGGGAAA+GGG | - | chr7.2:45137771-45137790 | None:intergenic | 60.0% | |
| GGGTGTGGGGGAACATTGGT+GGG | - | chr7.2:45137709-45137728 | None:intergenic | 60.0% | |
| GGTTTCAACATGTGGGCCGG+AGG | - | chr7.2:45138045-45138064 | None:intergenic | 60.0% | |
| TGAGCTCGGTCTTGCGGGAA+AGG | - | chr7.2:45137772-45137791 | None:intergenic | 60.0% | |
| TGGGTGTGGGGGAACATTGG+TGG | - | chr7.2:45137710-45137729 | None:intergenic | 60.0% | |
| TTCAACATGTGGGCCGGAGG+TGG | - | chr7.2:45138042-45138061 | None:intergenic | 60.0% | |
| ! | GCAGTGGAGTCTGAGGCTGT+AGG | - | chr7.2:45137364-45137383 | None:intergenic | 60.0% |
| ! | GGCACAGGTGGGTTCAGCAT+TGG | - | chr7.2:45137736-45137755 | None:intergenic | 60.0% |
| ! | GGCCATTTGGGACCCCTTGT+GGG | - | chr7.2:45137879-45137898 | None:intergenic | 60.0% |
| AACATGTGGGCCGGAGGTGG+TGG | - | chr7.2:45138039-45138058 | None:intergenic | 65.0% | |
| ACCACCACCACCACCACCTC+CGG | + | chr7.2:45138026-45138045 | MS.gene45938:CDS | 65.0% | |
| CACCTGCTGCATTCCAGGGC+TGG | - | chr7.2:45137924-45137943 | None:intergenic | 65.0% | |
| CCTGCCGACCCATCAGAGGA+TGG | - | chr7.2:45134619-45134638 | None:intergenic | 65.0% | |
| CCTGCTGCATTCCAGGGCTG+GGG | - | chr7.2:45137922-45137941 | None:intergenic | 65.0% | |
| CGTAGATCCCGTCGCCAGCT+TGG | + | chr7.2:45134763-45134782 | MS.gene45938:CDS | 65.0% | |
| CTCGCTCACCAAGCTGGCGA+CGG | - | chr7.2:45134774-45134793 | None:intergenic | 65.0% | |
| GCACGCCTCCAAAGGTGGCT+TGG | + | chr7.2:45135542-45135561 | MS.gene45938:intron | 65.0% | |
| GCCTCAGACTCCACTGCTCG+AGG | + | chr7.2:45137367-45137386 | MS.gene45938:CDS | 65.0% | |
| GCCTCGAGCAGTGGAGTCTG+AGG | - | chr7.2:45137371-45137390 | None:intergenic | 65.0% | |
| GCTCGGTCTTGCGGGAAAGG+GGG | - | chr7.2:45137769-45137788 | None:intergenic | 65.0% | |
| GGTTGCCTGCCCTGACCACT+TGG | + | chr7.2:45134669-45134688 | MS.gene45938:CDS | 65.0% | |
| TCGCTCACCAAGCTGGCGAC+GGG | - | chr7.2:45134773-45134792 | None:intergenic | 65.0% | |
| TGGGGCGAAGAAGATCGGCG+TGG | - | chr7.2:45137291-45137310 | None:intergenic | 65.0% | |
| ! | CCATCCTCTGATGGGTCGGC+AGG | + | chr7.2:45134616-45134635 | MS.gene45938:CDS | 65.0% |
| ! | GGGCCATTTGGGACCCCTTG+TGG | - | chr7.2:45137880-45137899 | None:intergenic | 65.0% |
| !! | GAGGTGGTGGTGGTGGTGGT+GGG | - | chr7.2:45138026-45138045 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGGAGAGCCAT+GGG | - | chr7.2:45138015-45138034 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGGAGAGCCA+TGG | - | chr7.2:45138016-45138035 | None:intergenic | 65.0% |
| CACGCCTGCCGACCCATCAG+AGG | - | chr7.2:45134623-45134642 | None:intergenic | 70.0% | |
| CCACTGCTCGAGGCCCCCAA+AGG | + | chr7.2:45137377-45137396 | MS.gene45938:CDS | 70.0% | |
| CCCCAGCCCTGGAATGCAGC+AGG | + | chr7.2:45137919-45137938 | MS.gene45938:CDS | 70.0% | |
| ! | ATGTGGGCCGGAGGTGGTGG+TGG | - | chr7.2:45138036-45138055 | None:intergenic | 70.0% |
| ! | CCTTTGGGGGCCTCGAGCAG+TGG | - | chr7.2:45137380-45137399 | None:intergenic | 70.0% |
| ! | GGTGGGAGAGCCATGGGCTG+TGG | - | chr7.2:45138009-45138028 | None:intergenic | 70.0% |
| !! | GGAGGTGGTGGTGGTGGTGG+TGG | - | chr7.2:45138027-45138046 | None:intergenic | 70.0% |
| !! | GCCGGAGGTGGTGGTGGTGG+TGG | - | chr7.2:45138030-45138049 | None:intergenic | 75.0% |
| !! | TGGGCCGGAGGTGGTGGTGG+TGG | - | chr7.2:45138033-45138052 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 45134589 | 45138152 | 45134589 | ID=MS.gene45938 |
| chr7.2 | mRNA | 45134589 | 45138152 | 45134589 | ID=MS.gene45938.t1;Parent=MS.gene45938 |
| chr7.2 | exon | 45134589 | 45134843 | 45134589 | ID=MS.gene45938.t1.exon1;Parent=MS.gene45938.t1 |
| chr7.2 | CDS | 45134589 | 45134843 | 45134589 | ID=cds.MS.gene45938.t1;Parent=MS.gene45938.t1 |
| chr7.2 | exon | 45135698 | 45135756 | 45135698 | ID=MS.gene45938.t1.exon2;Parent=MS.gene45938.t1 |
| chr7.2 | CDS | 45135698 | 45135756 | 45135698 | ID=cds.MS.gene45938.t1;Parent=MS.gene45938.t1 |
| chr7.2 | exon | 45137162 | 45138152 | 45137162 | ID=MS.gene45938.t1.exon3;Parent=MS.gene45938.t1 |
| chr7.2 | CDS | 45137162 | 45138152 | 45137162 | ID=cds.MS.gene45938.t1;Parent=MS.gene45938.t1 |
| Gene Sequence |
| Protein sequence |
