Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51620.t1 | XP_003598253.1 | 96.1 | 491 | 19 | 0 | 1 | 491 | 1 | 491 | 4.70E-265 | 923.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51620.t1 | Q5B5X8 | 33.4 | 341 | 169 | 14 | 176 | 469 | 59 | 388 | 5.6e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51620.t1 | G7IYK7 | 96.1 | 491 | 19 | 0 | 1 | 491 | 1 | 491 | 3.4e-265 | 923.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene51620 | -0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene050095 | MS.gene51620 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene51620 | -0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene51620 | -0.818722 | 1.69E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene51620 | 0.829585 | 4.74E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene51620 | -0.832046 | 1.18E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene51620 | -0.808034 | 3.78E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene51620 | -0.807382 | 5.19E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene51620 | -0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene51620 | -0.847328 | 1.24E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene51620 | -0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene051044 | MS.gene51620 | 0.809496 | 1.84E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene51620 | 0.814521 | 1.48E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene51620 | 0.816587 | 5.12E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene51620 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene51620 | -0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene51620 | -0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene052566 | MS.gene51620 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene51620 | -0.82047 | 6.74E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene51620 | -0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene51620 | 0.818933 | 1.51E-52 | -1.69E-46 |
| MS.gene053488 | MS.gene51620 | 0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene51620 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene054054 | MS.gene51620 | 0.824181 | 9.27E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene51620 | -0.809001 | 2.35E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene51620 | 0.804884 | 1.74E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene51620 | 0.847002 | 1.52E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene51620 | -0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene51620 | -0.813547 | 2.42E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene51620 | -0.835013 | 2.15E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene51620 | -0.813957 | 1.97E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene51620 | -0.834298 | 3.25E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene51620 | -0.81171 | 6.11E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene51620 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene51620 | -0.82536 | 4.89E-54 | -1.69E-46 |
| MS.gene058093 | MS.gene51620 | 0.824833 | 6.51E-54 | -1.69E-46 |
| MS.gene058099 | MS.gene51620 | 0.845893 | 3.06E-59 | -1.69E-46 |
| MS.gene058109 | MS.gene51620 | 0.804043 | 2.61E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene51620 | -0.804516 | 2.08E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene51620 | 0.86004 | 2.72E-63 | -1.69E-46 |
| MS.gene058173 | MS.gene51620 | 0.84489 | 5.71E-59 | -1.69E-46 |
| MS.gene058175 | MS.gene51620 | 0.853114 | 2.96E-61 | -1.69E-46 |
| MS.gene058179 | MS.gene51620 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene51620 | 0.828787 | 7.40E-55 | -1.69E-46 |
| MS.gene059037 | MS.gene51620 | 0.860299 | 2.28E-63 | -1.69E-46 |
| MS.gene059038 | MS.gene51620 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene51620 | 0.865758 | 4.68E-65 | -1.69E-46 |
| MS.gene059367 | MS.gene51620 | -0.825462 | 4.63E-54 | -1.69E-46 |
| MS.gene059699 | MS.gene51620 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene059701 | MS.gene51620 | 0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene51620 | 0.829891 | 3.99E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene51620 | -0.844887 | 5.72E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene51620 | -0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene51620 | -0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene51620 | 0.813717 | 2.22E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene51620 | -0.847585 | 1.05E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene51620 | -0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene51620 | -0.81687 | 4.43E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene51620 | 0.812408 | 4.30E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51620.t1 | MTR_3g009020 | 95.723 | 491 | 21 | 0 | 1 | 491 | 1 | 491 | 0.0 | 979 |
| MS.gene51620.t1 | MTR_3g009010 | 83.333 | 468 | 76 | 2 | 6 | 473 | 97 | 562 | 0.0 | 815 |
| MS.gene51620.t1 | MTR_3g009030 | 82.415 | 472 | 81 | 2 | 3 | 473 | 27 | 497 | 0.0 | 813 |
| MS.gene51620.t1 | MTR_3g008960 | 80.128 | 468 | 89 | 2 | 6 | 473 | 26 | 489 | 0.0 | 781 |
| MS.gene51620.t1 | MTR_8g091310 | 66.807 | 476 | 153 | 3 | 3 | 473 | 31 | 506 | 0.0 | 677 |
| MS.gene51620.t1 | MTR_5g062190 | 57.917 | 480 | 189 | 7 | 3 | 473 | 32 | 507 | 0.0 | 575 |
| MS.gene51620.t1 | MTR_5g062290 | 56.118 | 474 | 197 | 6 | 7 | 473 | 36 | 505 | 0.0 | 555 |
| MS.gene51620.t1 | MTR_3g086750 | 49.792 | 480 | 228 | 9 | 2 | 473 | 31 | 505 | 2.48e-161 | 468 |
| MS.gene51620.t1 | MTR_4g035760 | 49.593 | 123 | 61 | 1 | 352 | 473 | 57 | 179 | 3.31e-38 | 138 |
| MS.gene51620.t1 | MTR_5g061980 | 57.009 | 107 | 44 | 2 | 141 | 246 | 87 | 192 | 1.78e-35 | 135 |
| MS.gene51620.t1 | MTR_5g061980 | 46.739 | 92 | 47 | 2 | 329 | 418 | 219 | 310 | 3.09e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 105 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTATCAAGGCACAAAT+TGG | 0.213760 | 3.4:-4140139 | MS.gene51620:CDS |
| TGCATTACTACAATATGTTT+TGG | 0.227561 | 3.4:-4137620 | MS.gene51620:CDS |
| TTCAGATTTATGTCACAAAA+TGG | 0.249547 | 3.4:-4139868 | MS.gene51620:CDS |
| CAACATTTGGATGGGCTTAT+TGG | 0.274922 | 3.4:-4137263 | MS.gene51620:CDS |
| AAGAAACATTTCAAATTATA+AGG | 0.276598 | 3.4:-4140961 | MS.gene51620:CDS |
| GCAATTGAAGGTTCTCAAAA+TGG | 0.284192 | 3.4:-4138320 | MS.gene51620:CDS |
| GCCAACCGTGGTTCACCTTC+TGG | 0.286700 | 3.4:-4141336 | MS.gene51620:CDS |
| ATTGCGCTTGGGCGAAGTTT+TGG | 0.287207 | 3.4:+4137304 | None:intergenic |
| ACGATTAAACTGACATTTGT+AGG | 0.319818 | 3.4:+4137239 | None:intergenic |
| ACAAAAGGCTTAGGTGGATT+TGG | 0.325909 | 3.4:+4139799 | None:intergenic |
| AAGACTTGAGGGGCTCTATC+TGG | 0.327001 | 3.4:+4140035 | None:intergenic |
| GCTCTTCTCTCATTTGTTAG+TGG | 0.361357 | 3.4:-4137666 | MS.gene51620:CDS |
| AATCAATCACAGCGACTGTC+TGG | 0.363135 | 3.4:+4138240 | None:intergenic |
| AAACTTCGCCCAAGCGCAAT+TGG | 0.377941 | 3.4:-4137301 | MS.gene51620:CDS |
| TATGGTAATAAACCAAGTTT+AGG | 0.379061 | 3.4:-4137831 | MS.gene51620:CDS |
| CTTAGGTGGATTTGGATCAT+AGG | 0.380775 | 3.4:+4139807 | None:intergenic |
| CGCAATTGGATGTGTATTCT+CGG | 0.384741 | 3.4:-4137287 | MS.gene51620:CDS |
| GTTGAACACCCTAAAATTGA+AGG | 0.385361 | 3.4:+4141057 | None:intergenic |
| GAATCTAGGAAACTGGCTTT+TGG | 0.389983 | 3.4:-4141615 | MS.gene51620:CDS |
| CAAAATGGCAATGAACATAG+TGG | 0.392126 | 3.4:-4138305 | MS.gene51620:CDS |
| GTGTATTCTCGGGCAACATT+TGG | 0.393337 | 3.4:-4137276 | MS.gene51620:CDS |
| TCATTAATTTGCAGCTTTGG+AGG | 0.400954 | 3.4:-4141093 | MS.gene51620:intron |
| ATAGAGCCCCTCAAGTCTTA+AGG | 0.401028 | 3.4:-4140031 | MS.gene51620:CDS |
| CCATACAAAGCTGTGAATCT+AGG | 0.407481 | 3.4:-4141629 | MS.gene51620:CDS |
| AAGCTGTGAATCTAGGAAAC+TGG | 0.408682 | 3.4:-4141622 | MS.gene51620:CDS |
| CCGTGGTTCACCTTCTGGTT+GGG | 0.410067 | 3.4:-4141331 | MS.gene51620:CDS |
| CAAGAGATGGATATATAGAA+TGG | 0.417101 | 3.4:-4138280 | MS.gene51620:CDS |
| ATGCTTTGATTCGAACTTTG+AGG | 0.417179 | 3.4:+4140924 | None:intergenic |
| CCTAGATTCACAGCTTTGTA+TGG | 0.417981 | 3.4:+4141629 | None:intergenic |
| ATGAAACCTTCTCTCTTTGA+AGG | 0.421131 | 3.4:-4141581 | MS.gene51620:CDS |
| AAATATCTTTGTGCTGAAGA+TGG | 0.433448 | 3.4:-4141378 | MS.gene51620:CDS |
| AAGAGATGGATATATAGAAT+GGG | 0.434894 | 3.4:-4138279 | MS.gene51620:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.439502 | 3.4:-4140059 | MS.gene51620:CDS |
| TGTTTGCTTTGCAGGACCAT+TGG | 0.444914 | 3.4:-4139915 | MS.gene51620:intron |
| AGCTCTATTCCTCCTAAACT+TGG | 0.449256 | 3.4:+4137819 | None:intergenic |
| TTCTCGGGCAACATTTGGAT+GGG | 0.450046 | 3.4:-4137271 | MS.gene51620:CDS |
| TAGAGCCCCTCAAGTCTTAA+GGG | 0.451932 | 3.4:-4140030 | MS.gene51620:intron |
| AATATCTTTGTGCTGAAGAT+GGG | 0.456726 | 3.4:-4141377 | MS.gene51620:CDS |
| TTCTCACCCTTAAGACTTGA+GGG | 0.457721 | 3.4:+4140024 | None:intergenic |
| TGCTTTGATTCGAACTTTGA+GGG | 0.457798 | 3.4:+4140925 | None:intergenic |
| GAAAGAGCATCAGATCTTGC+TGG | 0.479776 | 3.4:-4137546 | MS.gene51620:CDS |
| ACCGTGGTTCACCTTCTGGT+TGG | 0.489604 | 3.4:-4141332 | MS.gene51620:CDS |
| TAGGCTATCCACCATCCAAC+AGG | 0.491070 | 3.4:+4139826 | None:intergenic |
| CCACAATCACTTTCATCCCA+TGG | 0.493223 | 3.4:+4138351 | None:intergenic |
| AATTGTCAACAAAGATCTCT+TGG | 0.493359 | 3.4:-4141558 | MS.gene51620:intron |
| TGAAATGTTTCTTTGTTGCT+AGG | 0.493913 | 3.4:+4140971 | None:intergenic |
| GTTCGAATCAAAGCATCAAA+TGG | 0.495106 | 3.4:-4140917 | MS.gene51620:CDS |
| GTGGACTTGCATGCAATTGA+AGG | 0.498572 | 3.4:-4138332 | MS.gene51620:CDS |
| CATTAATTTGCAGCTTTGGA+GGG | 0.502035 | 3.4:-4141092 | MS.gene51620:intron |
| ATTCTCGGGCAACATTTGGA+TGG | 0.503691 | 3.4:-4137272 | MS.gene51620:CDS |
| AATACACATCCAATTGCGCT+TGG | 0.507025 | 3.4:+4137292 | None:intergenic |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3.4:-4139759 | MS.gene51620:CDS |
| TTTGTGGGGTTAAATACTAT+AGG | 0.509718 | 3.4:-4141028 | MS.gene51620:CDS |
| GGAGAGTACCAACTTACTAA+TGG | 0.515314 | 3.4:-4140065 | MS.gene51620:CDS |
| GACCATAACCATTAGTAAGT+TGG | 0.516537 | 3.4:+4140057 | None:intergenic |
| AAATTATCAAGGCACAAATT+GGG | 0.518686 | 3.4:-4140138 | MS.gene51620:CDS |
| AAAATGGATTAGATGCTGTC+AGG | 0.519664 | 3.4:-4139852 | MS.gene51620:CDS |
| ATCAATCACAGCGACTGTCT+GGG | 0.521320 | 3.4:+4138241 | None:intergenic |
| ACAAATGTCAGTTTAATCGT+TGG | 0.527570 | 3.4:-4137236 | MS.gene51620:CDS |
| TAGGGGAATGGACGGGTGAG+TGG | 0.529808 | 3.4:-4137356 | MS.gene51620:CDS |
| CTCAAGTGGATGATCGAGAA+TGG | 0.534717 | 3.4:-4137210 | MS.gene51620:CDS |
| GGTAATAAACCAAGTTTAGG+AGG | 0.535992 | 3.4:-4137828 | MS.gene51620:CDS |
| ATACACATCCAATTGCGCTT+GGG | 0.537002 | 3.4:+4137293 | None:intergenic |
| TGTGATCATGTCAAATCCAT+TGG | 0.540561 | 3.4:-4137703 | MS.gene51620:CDS |
| GCTTTAGAATCTCCATCCAA+TGG | 0.542610 | 3.4:+4137687 | None:intergenic |
| GAACATAGTGGGACAAGAGA+TGG | 0.543354 | 3.4:-4138293 | MS.gene51620:CDS |
| ACCAACAGATAGCTTTCGAC+AGG | 0.544967 | 3.4:-4137160 | MS.gene51620:CDS |
| ACAATTCCTTCAAAGAGAGA+AGG | 0.552174 | 3.4:+4141575 | None:intergenic |
| CCATGGGATGAAAGTGATTG+TGG | 0.555733 | 3.4:-4138351 | MS.gene51620:CDS |
| GCAATTGGATGTGTATTCTC+GGG | 0.557257 | 3.4:-4137286 | MS.gene51620:CDS |
| ATATCTTTGTGCTGAAGATG+GGG | 0.558601 | 3.4:-4141376 | MS.gene51620:CDS |
| ATTCTCACCCTTAAGACTTG+AGG | 0.559378 | 3.4:+4140023 | None:intergenic |
| TCCTGTCGAAAGCTATCTGT+TGG | 0.560585 | 3.4:+4137159 | None:intergenic |
| CAGTTATGTATGAATTCCAA+TGG | 0.561323 | 3.4:+4139899 | None:intergenic |
| GGGTTAAATACTATAGGAGG+AGG | 0.574219 | 3.4:-4141022 | MS.gene51620:CDS |
| ACCAGAAGGTGAACCACGGT+TGG | 0.574519 | 3.4:+4141335 | None:intergenic |
| ACAATTGTAAACACATTACA+AGG | 0.575947 | 3.4:-4140086 | MS.gene51620:CDS |
| TTAGTGACAGCAAATTATCA+AGG | 0.576262 | 3.4:-4140149 | MS.gene51620:CDS |
| CTGTCAGGATACCTGTTGGA+TGG | 0.577394 | 3.4:-4139837 | MS.gene51620:CDS |
| AGATTCACAGCTTTGTATGG+CGG | 0.583970 | 3.4:+4141632 | None:intergenic |
| TTGGGATGACAATGATCCAT+CGG | 0.585148 | 3.4:-4140120 | MS.gene51620:CDS |
| TTAATCGTTGGAGTCTCAAG+TGG | 0.586204 | 3.4:-4137224 | MS.gene51620:CDS |
| GTGGGGTTAAATACTATAGG+AGG | 0.586439 | 3.4:-4141025 | MS.gene51620:CDS |
| TTGAATGTTTCCCAACCAGA+AGG | 0.591163 | 3.4:+4141321 | None:intergenic |
| GCTTTGATTCGAACTTTGAG+GGG | 0.596734 | 3.4:+4140926 | None:intergenic |
| ATCATGTCAAATCCATTGGA+TGG | 0.600387 | 3.4:-4137699 | MS.gene51620:CDS |
| TCAATCACAGCGACTGTCTG+GGG | 0.606862 | 3.4:+4138242 | None:intergenic |
| AAAATGGCAATGAACATAGT+GGG | 0.608116 | 3.4:-4138304 | MS.gene51620:CDS |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3.4:+4137628 | None:intergenic |
| ATAGCTTTCGACAGGATGTG+AGG | 0.613651 | 3.4:-4137152 | MS.gene51620:CDS |
| CTATCAAGATTGACACCTTG+TGG | 0.620469 | 3.4:+4137786 | None:intergenic |
| TAGCTTTCGACAGGATGTGA+GGG | 0.624203 | 3.4:-4137151 | MS.gene51620:CDS |
| TGATTGATTTCTTAGCACAA+AGG | 0.624556 | 3.4:-4138226 | MS.gene51620:intron |
| TAGTCTAAAGAAGTATTACA+AGG | 0.625277 | 3.4:-4137766 | MS.gene51620:CDS |
| AGAGATGGATATATAGAATG+GGG | 0.625469 | 3.4:-4138278 | MS.gene51620:CDS |
| TCAGGATACCTGTTGGATGG+TGG | 0.627765 | 3.4:-4139834 | MS.gene51620:CDS |
| GATGCTGTCAGGATACCTGT+TGG | 0.641176 | 3.4:-4139841 | MS.gene51620:CDS |
| TCTCACCCTTAAGACTTGAG+GGG | 0.663932 | 3.4:+4140025 | None:intergenic |
| CCCAACCAGAAGGTGAACCA+CGG | 0.677633 | 3.4:+4141331 | None:intergenic |
| TTTATGATTGCAGAAACCAT+GGG | 0.680212 | 3.4:-4138367 | MS.gene51620:intron |
| TATCTTTGTGCTGAAGATGG+GGG | 0.680990 | 3.4:-4141375 | MS.gene51620:CDS |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3.4:-4139758 | MS.gene51620:CDS |
| ACTGCTATTGTAGCCAACCG+TGG | 0.690449 | 3.4:-4141348 | MS.gene51620:CDS |
| TGTGAGAAAATACAACTCAG+AGG | 0.726959 | 3.4:-4137730 | MS.gene51620:CDS |
| GAGCTGATGAATGAGCCACA+AGG | 0.730017 | 3.4:-4137801 | MS.gene51620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAAAATAATAAAATC+TGG | - | chr3.4:4139386-4139405 | MS.gene51620:intron | 10.0% |
| !! | ATATGTTACAATTTAATTAA+AGG | + | chr3.4:4140343-4140362 | None:intergenic | 10.0% |
| !! | TAATACATATATATGAAATA+TGG | - | chr3.4:4141341-4141360 | MS.gene51620:CDS | 10.0% |
| !!! | ATAAAATGAAATATTTTCTT+GGG | + | chr3.4:4140096-4140115 | None:intergenic | 10.0% |
| !!! | ATGATTTTTTATTTTTTTTG+TGG | + | chr3.4:4137325-4137344 | None:intergenic | 10.0% |
| !!! | TATAAAATGAAATATTTTCT+TGG | + | chr3.4:4140097-4140116 | None:intergenic | 10.0% |
| !!! | TATAATTTTAGATTTTGAAA+TGG | + | chr3.4:4139680-4139699 | None:intergenic | 10.0% |
| !!! | TCTGAAATTTTAAAAAATTT+GGG | + | chr3.4:4139705-4139724 | None:intergenic | 10.0% |
| !!! | TTCTGAAATTTTAAAAAATT+TGG | + | chr3.4:4139706-4139725 | None:intergenic | 10.0% |
| !!! | TTTTTGAAATAGAAATTAAT+TGG | + | chr3.4:4139886-4139905 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAAATACTTCAT+CGG | + | chr3.4:4137630-4137649 | None:intergenic | 15.0% |
| !! | AAATAATTAGAACTTACAAA+GGG | + | chr3.4:4137666-4137685 | None:intergenic | 15.0% |
| !! | AAGAAACATTTCAAATTATA+AGG | - | chr3.4:4137820-4137839 | MS.gene51620:CDS | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr3.4:4139578-4139597 | MS.gene51620:intron | 15.0% |
| !! | AGATAATTTATATGATTTGA+TGG | + | chr3.4:4138201-4138220 | None:intergenic | 15.0% |
| !! | ATGTAATAAAGAAACAATTT+AGG | + | chr3.4:4138050-4138069 | None:intergenic | 15.0% |
| !! | CAAAATCTTGAATTAAAATA+GGG | + | chr3.4:4139652-4139671 | None:intergenic | 15.0% |
| !! | CCTATTTATAAAAGAAATTT+AGG | + | chr3.4:4137606-4137625 | None:intergenic | 15.0% |
| !! | GATTTCAAATTTAAAAATGT+CGG | - | chr3.4:4140267-4140286 | MS.gene51620:intron | 15.0% |
| !! | GTTATGTTAAATTAAAAATG+AGG | + | chr3.4:4138397-4138416 | None:intergenic | 15.0% |
| !! | TCAAAATCTTGAATTAAAAT+AGG | + | chr3.4:4139653-4139672 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr3.4:4139505-4139486 | None:intergenic | 15.0% |
| !!! | ATATGTTTTTTCTTTTTGTA+GGG | - | chr3.4:4141407-4141426 | MS.gene51620:CDS | 15.0% |
| !!! | CCTAAATTTCTTTTATAAAT+AGG | - | chr3.4:4137603-4137622 | MS.gene51620:CDS | 15.0% |
| !!! | TAAAGGTTTAAATAAACTTT+TGG | + | chr3.4:4140326-4140345 | None:intergenic | 15.0% |
| !!! | TATATGTTTTTTCTTTTTGT+AGG | - | chr3.4:4141406-4141425 | MS.gene51620:CDS | 15.0% |
| !!! | TGTTTTGAAACTTTAAAAAT+TGG | - | chr3.4:4140236-4140255 | MS.gene51620:intron | 15.0% |
| !!! | TTAAAATTTAGATGTACTTT+TGG | - | chr3.4:4139073-4139092 | MS.gene51620:intron | 15.0% |
| !! | AAAAAAAACTCCAAATTCAA+TGG | - | chr3.4:4140206-4140225 | MS.gene51620:intron | 20.0% |
| !! | AAAAACATAATAACCGATAT+AGG | + | chr3.4:4138022-4138041 | None:intergenic | 20.0% |
| !! | AACTCATGCATATTATATAT+TGG | - | chr3.4:4141376-4141395 | MS.gene51620:CDS | 20.0% |
| !! | AATGTATCTGGTTAAAAAAT+TGG | + | chr3.4:4137571-4137590 | None:intergenic | 20.0% |
| !! | AATTTGAACTTCTTAATACT+AGG | + | chr3.4:4137301-4137320 | None:intergenic | 20.0% |
| !! | ACCTAAATGTCTTTAATAAA+TGG | + | chr3.4:4137525-4137544 | None:intergenic | 20.0% |
| !! | ACTCATGCATATTATATATT+GGG | - | chr3.4:4141377-4141396 | MS.gene51620:CDS | 20.0% |
| !! | ATAAATGAAGAATATATGAG+AGG | - | chr3.4:4140665-4140684 | MS.gene51620:intron | 20.0% |
| !! | ATCTAATTTCTTCTCTATAT+TGG | - | chr3.4:4140596-4140615 | MS.gene51620:intron | 20.0% |
| !! | CAAATAATTAGAACTTACAA+AGG | + | chr3.4:4137667-4137686 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr3.4:4139515-4139534 | MS.gene51620:intron | 20.0% |
| !! | TAATAAAGAAACAATTTAGG+TGG | + | chr3.4:4138047-4138066 | None:intergenic | 20.0% |
| !! | TCAACAAAAATTAATGTATC+TGG | + | chr3.4:4137583-4137602 | None:intergenic | 20.0% |
| !! | TCACAAGTGATATTATAAAA+GGG | + | chr3.4:4140153-4140172 | None:intergenic | 20.0% |
| !! | TCCATTTATTAAAGACATTT+AGG | - | chr3.4:4137521-4137540 | MS.gene51620:CDS | 20.0% |
| !!! | AATGCTCTAAATAAAATTGA+GGG | + | chr3.4:4137256-4137275 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr3.4:4139421-4139440 | MS.gene51620:intron | 20.0% |
| !!! | AGTTTTTTTTATGATGCATT+AGG | + | chr3.4:4140196-4140215 | None:intergenic | 20.0% |
| !!! | GTTTGATCATTTTTCTAAAT+TGG | + | chr3.4:4138487-4138506 | None:intergenic | 20.0% |
| !!! | TAATGCTCTAAATAAAATTG+AGG | + | chr3.4:4137257-4137276 | None:intergenic | 20.0% |
| !!! | TACAAGGTCATTATTTTATA+GGG | + | chr3.4:4139133-4139152 | None:intergenic | 20.0% |
| !!! | TATGTTTTTTCTTTTTGTAG+GGG | - | chr3.4:4141408-4141427 | MS.gene51620:CDS | 20.0% |
| !!! | TTACAAGGTCATTATTTTAT+AGG | + | chr3.4:4139134-4139153 | None:intergenic | 20.0% |
| !!! | TTTGAAACTTTAAAAATTGG+AGG | - | chr3.4:4140239-4140258 | MS.gene51620:intron | 20.0% |
| !!! | TTTTAATCAAGTTATGTACT+CGG | - | chr3.4:4137940-4137959 | MS.gene51620:intron | 20.0% |
| !!! | TTTTGGTCTCATATTTTAAT+GGG | - | chr3.4:4139090-4139109 | MS.gene51620:intron | 20.0% |
| ! | AAAAGGGAGATATTAACAAT+GGG | + | chr3.4:4140137-4140156 | None:intergenic | 25.0% |
| ! | AAATTATCAAGGCACAAATT+GGG | - | chr3.4:4138643-4138662 | MS.gene51620:intron | 25.0% |
| ! | AAGAGATGGATATATAGAAT+GGG | - | chr3.4:4140502-4140521 | MS.gene51620:intron | 25.0% |
| ! | AAGATCTAATCCAAATAACA+CGG | + | chr3.4:4138328-4138347 | None:intergenic | 25.0% |
| ! | AAGTAAAGACTAAACTTACA+AGG | + | chr3.4:4139149-4139168 | None:intergenic | 25.0% |
| ! | ACAATTGTAAACACATTACA+AGG | - | chr3.4:4138695-4138714 | MS.gene51620:intron | 25.0% |
| ! | AGGGCAAAAAAACAAAATTA+GGG | - | chr3.4:4139549-4139568 | MS.gene51620:intron | 25.0% |
| ! | ATGCATTAGGTTAAAAAATG+AGG | + | chr3.4:4140183-4140202 | None:intergenic | 25.0% |
| ! | ATGTCTTTAATAAATGGAAC+TGG | + | chr3.4:4137519-4137538 | None:intergenic | 25.0% |
| ! | ATTGAGCCTTCATAAATATA+TGG | + | chr3.4:4138604-4138623 | None:intergenic | 25.0% |
| ! | CATCATATATCATATATTCC+TGG | + | chr3.4:4140878-4140897 | None:intergenic | 25.0% |
| ! | CTCATGCATATTATATATTG+GGG | - | chr3.4:4141378-4141397 | MS.gene51620:CDS | 25.0% |
| ! | GAAAAAAGATGTTATGACAT+TGG | + | chr3.4:4138274-4138293 | None:intergenic | 25.0% |
| ! | GTCACAAGTGATATTATAAA+AGG | + | chr3.4:4140154-4140173 | None:intergenic | 25.0% |
| ! | GTCACATATTGGATATTAAT+AGG | - | chr3.4:4140642-4140661 | MS.gene51620:intron | 25.0% |
| ! | GTGTTCAACAAAAAATTTGT+GGG | - | chr3.4:4137738-4137757 | MS.gene51620:CDS | 25.0% |
| ! | TAAAAGGGAGATATTAACAA+TGG | + | chr3.4:4140138-4140157 | None:intergenic | 25.0% |
| ! | TATAATATGCATGAGTTAGT+TGG | + | chr3.4:4141373-4141392 | None:intergenic | 25.0% |
| ! | TATGATTAACAAGTGTCTTA+AGG | + | chr3.4:4139935-4139954 | None:intergenic | 25.0% |
| ! | TATGGTAATAAACCAAGTTT+AGG | - | chr3.4:4140950-4140969 | MS.gene51620:CDS | 25.0% |
| ! | TATTGGAATTTAAGTATGAG+TGG | - | chr3.4:4140613-4140632 | MS.gene51620:intron | 25.0% |
| ! | TGTATACAGAATAAATGTAG+TGG | - | chr3.4:4140693-4140712 | MS.gene51620:intron | 25.0% |
| ! | TGTTCAACAAAAAATTTGTG+GGG | - | chr3.4:4137739-4137758 | MS.gene51620:CDS | 25.0% |
| ! | TTCAGATTTATGTCACAAAA+TGG | - | chr3.4:4138913-4138932 | MS.gene51620:intron | 25.0% |
| !! | AATTCAAATTGATTAGCTAG+AGG | + | chr3.4:4137919-4137938 | None:intergenic | 25.0% |
| !! | GCATTACTACAATATGTTTT+GGG | - | chr3.4:4141162-4141181 | MS.gene51620:intron | 25.0% |
| !! | GTTTGATCATTTTCCTATAT+CGG | - | chr3.4:4138006-4138025 | MS.gene51620:intron | 25.0% |
| !! | TGCATTACTACAATATGTTT+TGG | - | chr3.4:4141161-4141180 | MS.gene51620:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr3.4:4139226-4139245 | None:intergenic | 25.0% |
| !!! | ACAAATGCTCTTACTTTTAT+AGG | - | chr3.4:4141268-4141287 | MS.gene51620:intron | 25.0% |
| !!! | CATTGTGTATGTTTTGATTT+AGG | - | chr3.4:4137342-4137361 | MS.gene51620:CDS | 25.0% |
| !!! | CTTTTGGTCTCATATTTTAA+TGG | - | chr3.4:4139089-4139108 | MS.gene51620:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr3.4:4139227-4139246 | None:intergenic | 25.0% |
| !!! | TAGTCTAAAGAAGTATTACA+AGG | - | chr3.4:4141015-4141034 | MS.gene51620:CDS | 25.0% |
| AAAAACTCCAAATTCAATGG+TGG | - | chr3.4:4140209-4140228 | MS.gene51620:intron | 30.0% | |
| AAAACTCCAAATTCAATGGT+GGG | - | chr3.4:4140210-4140229 | MS.gene51620:intron | 30.0% | |
| AAAATGGCAATGAACATAGT+GGG | - | chr3.4:4140477-4140496 | MS.gene51620:intron | 30.0% | |
| AAAGGGAGATATTAACAATG+GGG | + | chr3.4:4140136-4140155 | None:intergenic | 30.0% | |
| AAATATCTTTGTGCTGAAGA+TGG | - | chr3.4:4137403-4137422 | MS.gene51620:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | - | chr3.4:4139593-4139612 | MS.gene51620:intron | 30.0% | |
| AATATCTTTGTGCTGAAGAT+GGG | - | chr3.4:4137404-4137423 | MS.gene51620:intron | 30.0% | |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3.4:4137223-4137242 | MS.gene51620:CDS | 30.0% | |
| AATTTCTTAACAACTGTCCT+AGG | + | chr3.4:4139783-4139802 | None:intergenic | 30.0% | |
| ACAAATGTCAGTTTAATCGT+TGG | - | chr3.4:4141545-4141564 | MS.gene51620:intron | 30.0% | |
| ACGATTAAACTGACATTTGT+AGG | + | chr3.4:4141545-4141564 | None:intergenic | 30.0% | |
| AGAGATGGATATATAGAATG+GGG | - | chr3.4:4140503-4140522 | MS.gene51620:intron | 30.0% | |
| ATTGTCATATGAAAAACCGA+TGG | + | chr3.4:4138680-4138699 | None:intergenic | 30.0% | |
| ATTTCTTAACAACTGTCCTA+GGG | + | chr3.4:4139782-4139801 | None:intergenic | 30.0% | |
| CAAATTATCAAGGCACAAAT+TGG | - | chr3.4:4138642-4138661 | MS.gene51620:intron | 30.0% | |
| CAAGAGATGGATATATAGAA+TGG | - | chr3.4:4140501-4140520 | MS.gene51620:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr3.4:4139289-4139308 | MS.gene51620:intron | 30.0% | |
| CAGGGCAAAAAAACAAAATT+AGG | - | chr3.4:4139548-4139567 | MS.gene51620:intron | 30.0% | |
| CAGTTATGTATGAATTCCAA+TGG | + | chr3.4:4138885-4138904 | None:intergenic | 30.0% | |
| CATTAGGTTAAAAAATGAGG+TGG | + | chr3.4:4140180-4140199 | None:intergenic | 30.0% | |
| CTCTGACCATATATTTATGA+AGG | - | chr3.4:4138595-4138614 | MS.gene51620:intron | 30.0% | |
| CTTCATAAATATATGGTCAG+AGG | + | chr3.4:4138597-4138616 | None:intergenic | 30.0% | |
| GGTGTTCAACAAAAAATTTG+TGG | - | chr3.4:4137737-4137756 | MS.gene51620:CDS | 30.0% | |
| GTTAGTGCAATTGAAAACAT+CGG | - | chr3.4:4138109-4138128 | MS.gene51620:intron | 30.0% | |
| TAATTAGAACTTACAAAGGG+TGG | + | chr3.4:4137663-4137682 | None:intergenic | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3.4:4138722-4138741 | MS.gene51620:intron | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3.4:4141156-4141175 | None:intergenic | 30.0% | |
| TCTATGACTTTCAAACTCAT+TGG | + | chr3.4:4139966-4139985 | None:intergenic | 30.0% | |
| TGAAATGTTTCTTTGTTGCT+AGG | + | chr3.4:4137813-4137832 | None:intergenic | 30.0% | |
| TTAGTGACAGCAAATTATCA+AGG | - | chr3.4:4138632-4138651 | MS.gene51620:intron | 30.0% | |
| TTAGTGCAATTGAAAACATC+GGG | - | chr3.4:4138110-4138129 | MS.gene51620:intron | 30.0% | |
| TTGAACTTCTTAATACTAGG+AGG | + | chr3.4:4137298-4137317 | None:intergenic | 30.0% | |
| TTTATGATTGCAGAAACCAT+GGG | - | chr3.4:4140414-4140433 | MS.gene51620:intron | 30.0% | |
| TTTGTGGGGTTAAATACTAT+AGG | - | chr3.4:4137753-4137772 | MS.gene51620:CDS | 30.0% | |
| ! | ATGACTCATCCTTCAATTTT+AGG | - | chr3.4:4137715-4137734 | MS.gene51620:CDS | 30.0% |
| ! | CTATTTCCCACCTTTAAAAA+CGG | - | chr3.4:4138087-4138106 | MS.gene51620:intron | 30.0% |
| ! | TGACTCATCCTTCAATTTTA+GGG | - | chr3.4:4137716-4137735 | MS.gene51620:CDS | 30.0% |
| ! | TGATTGATTTCTTAGCACAA+AGG | - | chr3.4:4140555-4140574 | MS.gene51620:intron | 30.0% |
| ! | TTGCTTAGATGCATTTTGTA+TGG | + | chr3.4:4141452-4141471 | None:intergenic | 30.0% |
| ! | TTTTATGATTGCAGAAACCA+TGG | - | chr3.4:4140413-4140432 | MS.gene51620:intron | 30.0% |
| ! | TTTTTCTTTTTGTAGGGGAA+TGG | - | chr3.4:4141413-4141432 | MS.gene51620:CDS | 30.0% |
| !! | ATTGAATTTGTTGACAGGTA+TGG | - | chr3.4:4140932-4140951 | MS.gene51620:CDS | 30.0% |
| !! | ATTGCACTAACCGTTTTTAA+AGG | + | chr3.4:4138100-4138119 | None:intergenic | 30.0% |
| !! | ATTTGATGGATGTTTTCTGA+AGG | + | chr3.4:4138187-4138206 | None:intergenic | 30.0% |
| !! | CTTGAATTGAATTTGTTGAC+AGG | - | chr3.4:4140927-4140946 | MS.gene51620:CDS | 30.0% |
| !! | GTTTTCTGAAGGGTTATTAT+GGG | + | chr3.4:4138176-4138195 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr3.4:4139609-4139628 | MS.gene51620:intron | 30.0% |
| !! | TGTTTTCTGAAGGGTTATTA+TGG | + | chr3.4:4138177-4138196 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr3.4:4139608-4139627 | MS.gene51620:intron | 30.0% |
| !! | TTTGATGGATGTTTTCTGAA+GGG | + | chr3.4:4138186-4138205 | None:intergenic | 30.0% |
| !!! | ATCAAATGGTCTATTTTTGC+AGG | - | chr3.4:4137878-4137897 | MS.gene51620:intron | 30.0% |
| !!! | ATGTTTTGGGACAAATTCAA+TGG | - | chr3.4:4141175-4141194 | MS.gene51620:intron | 30.0% |
| !!! | GTGTATGTTTTGATTTAGGA+TGG | - | chr3.4:4137346-4137365 | MS.gene51620:CDS | 30.0% |
| AAACTCCAAATTCAATGGTG+GGG | - | chr3.4:4140211-4140230 | MS.gene51620:intron | 35.0% | |
| ACAATTCCTTCAAAGAGAGA+AGG | + | chr3.4:4137209-4137228 | None:intergenic | 35.0% | |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3.4:4139023-4139042 | MS.gene51620:intron | 35.0% | |
| ATATCTTTGTGCTGAAGATG+GGG | - | chr3.4:4137405-4137424 | MS.gene51620:intron | 35.0% | |
| ATCATGTCAAATCCATTGGA+TGG | - | chr3.4:4141082-4141101 | MS.gene51620:CDS | 35.0% | |
| ATGAAACCTTCTCTCTTTGA+AGG | - | chr3.4:4137200-4137219 | MS.gene51620:CDS | 35.0% | |
| ATTAGCTAGAGGATGGAATA+AGG | + | chr3.4:4137908-4137927 | None:intergenic | 35.0% | |
| CAAAATGGCAATGAACATAG+TGG | - | chr3.4:4140476-4140495 | MS.gene51620:intron | 35.0% | |
| GACCATAACCATTAGTAAGT+TGG | + | chr3.4:4138727-4138746 | None:intergenic | 35.0% | |
| GCAATTGAAGGTTCTCAAAA+TGG | - | chr3.4:4140461-4140480 | MS.gene51620:intron | 35.0% | |
| GGTAATAAACCAAGTTTAGG+AGG | - | chr3.4:4140953-4140972 | MS.gene51620:CDS | 35.0% | |
| GTTGAACACCCTAAAATTGA+AGG | + | chr3.4:4137727-4137746 | None:intergenic | 35.0% | |
| TAAAGGTGGGAAATAGACTA+CGG | + | chr3.4:4138083-4138102 | None:intergenic | 35.0% | |
| TAACCAATGTGTGTGTGATA+GGG | - | chr3.4:4141305-4141324 | MS.gene51620:intron | 35.0% | |
| TACGCTTGAGACAAACATAT+AGG | + | chr3.4:4140744-4140763 | None:intergenic | 35.0% | |
| TGACTTTCAAACTCATTGGT+CGG | + | chr3.4:4139962-4139981 | None:intergenic | 35.0% | |
| TGAGTAGGAACTAATACTCA+GGG | - | chr3.4:4139530-4139549 | MS.gene51620:intron | 35.0% | |
| TGGAATTTAAGTATGAGTGG+TGG | - | chr3.4:4140616-4140635 | MS.gene51620:intron | 35.0% | |
| TGTGAGAAAATACAACTCAG+AGG | - | chr3.4:4141051-4141070 | MS.gene51620:CDS | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3.4:4141078-4141097 | MS.gene51620:CDS | 35.0% | |
| TTGAGTAGGAACTAATACTC+AGG | - | chr3.4:4139529-4139548 | MS.gene51620:intron | 35.0% | |
| ! | ATCAACTTGACCGTGTTATT+TGG | - | chr3.4:4138315-4138334 | MS.gene51620:CDS | 35.0% |
| ! | ATGCTTTGATTCGAACTTTG+AGG | + | chr3.4:4137860-4137879 | None:intergenic | 35.0% |
| ! | CAAATTGATTAGCTAGAGGA+TGG | + | chr3.4:4137915-4137934 | None:intergenic | 35.0% |
| ! | GTTCGAATCAAAGCATCAAA+TGG | - | chr3.4:4137864-4137883 | MS.gene51620:intron | 35.0% |
| ! | TGCTTTGATTCGAACTTTGA+GGG | + | chr3.4:4137859-4137878 | None:intergenic | 35.0% |
| ! | TTTTCACTTGCAAAGTAGCT+TGG | - | chr3.4:4138289-4138308 | MS.gene51620:CDS | 35.0% |
| !! | AAAATGGATTAGATGCTGTC+AGG | - | chr3.4:4138929-4138948 | MS.gene51620:intron | 35.0% |
| !! | CACTAACCGTTTTTAAAGGT+GGG | + | chr3.4:4138096-4138115 | None:intergenic | 35.0% |
| !! | CATTAATTTGCAGCTTTGGA+GGG | - | chr3.4:4137689-4137708 | MS.gene51620:CDS | 35.0% |
| !! | GACTTGTTGAAATTCTTCGT+TGG | - | chr3.4:4138808-4138827 | MS.gene51620:intron | 35.0% |
| !! | TCATTAATTTGCAGCTTTGG+AGG | - | chr3.4:4137688-4137707 | MS.gene51620:CDS | 35.0% |
| !! | TGCTCATTAATTTGCAGCTT+TGG | - | chr3.4:4137685-4137704 | MS.gene51620:CDS | 35.0% |
| !!! | TTTGCGATAATTTTTTGCGG+AGG | - | chr3.4:4139424-4139443 | MS.gene51620:intron | 35.0% |
| AAGCTGTGAATCTAGGAAAC+TGG | - | chr3.4:4137159-4137178 | MS.gene51620:CDS | 40.0% | |
| AATACACATCCAATTGCGCT+TGG | + | chr3.4:4141492-4141511 | None:intergenic | 40.0% | |
| ACATTCCCCACCATTGAATT+TGG | + | chr3.4:4140219-4140238 | None:intergenic | 40.0% | |
| AGCTCTATTCCTCCTAAACT+TGG | + | chr3.4:4140965-4140984 | None:intergenic | 40.0% | |
| ATACACATCCAATTGCGCTT+GGG | + | chr3.4:4141491-4141510 | None:intergenic | 40.0% | |
| ATGGGAGACATATATTCTCC+CGG | + | chr3.4:4138158-4138177 | None:intergenic | 40.0% | |
| ATTCTCACCCTTAAGACTTG+AGG | + | chr3.4:4138761-4138780 | None:intergenic | 40.0% | |
| CACTTGACAATGCTTTCACA+TGG | - | chr3.4:4139022-4139041 | MS.gene51620:intron | 40.0% | |
| CCATACAAAGCTGTGAATCT+AGG | - | chr3.4:4137152-4137171 | MS.gene51620:CDS | 40.0% | |
| CGCAATTGGATGTGTATTCT+CGG | - | chr3.4:4141494-4141513 | MS.gene51620:intron | 40.0% | |
| CTAACCAATGTGTGTGTGAT+AGG | - | chr3.4:4141304-4141323 | MS.gene51620:intron | 40.0% | |
| CTATCAAGATTGACACCTTG+TGG | + | chr3.4:4140998-4141017 | None:intergenic | 40.0% | |
| GCAATGGACAAAGACCTTAA+TGG | + | chr3.4:4138136-4138155 | None:intergenic | 40.0% | |
| GCAATTGGATGTGTATTCTC+GGG | - | chr3.4:4141495-4141514 | MS.gene51620:intron | 40.0% | |
| GGGTTAAATACTATAGGAGG+AGG | - | chr3.4:4137759-4137778 | MS.gene51620:CDS | 40.0% | |
| GTGGGGTTAAATACTATAGG+AGG | - | chr3.4:4137756-4137775 | MS.gene51620:CDS | 40.0% | |
| TATCTTTGTGCTGAAGATGG+GGG | - | chr3.4:4137406-4137425 | MS.gene51620:intron | 40.0% | |
| TCCACTCACACTTAAATTCC+AGG | - | chr3.4:4140857-4140876 | MS.gene51620:intron | 40.0% | |
| TCCTGGAATTTAAGTGTGAG+TGG | + | chr3.4:4140861-4140880 | None:intergenic | 40.0% | |
| TGTCTTAATCGTTGCTGACA+GGG | + | chr3.4:4138237-4138256 | None:intergenic | 40.0% | |
| TTAAGGTCTTTGTCCATTGC+CGG | - | chr3.4:4138136-4138155 | MS.gene51620:intron | 40.0% | |
| TTAATCGTTGGAGTCTCAAG+TGG | - | chr3.4:4141557-4141576 | MS.gene51620:intron | 40.0% | |
| TTCTCACCCTTAAGACTTGA+GGG | + | chr3.4:4138760-4138779 | None:intergenic | 40.0% | |
| TTGAAAACATCGGGCCATTA+AGG | - | chr3.4:4138119-4138138 | MS.gene51620:intron | 40.0% | |
| TTGAATGTTTCCCAACCAGA+AGG | + | chr3.4:4137463-4137482 | None:intergenic | 40.0% | |
| TTGGGATGACAATGATCCAT+CGG | - | chr3.4:4138661-4138680 | MS.gene51620:intron | 40.0% | |
| ! | AATCCACCTAAGCCTTTTGT+CGG | - | chr3.4:4138985-4139004 | MS.gene51620:intron | 40.0% |
| ! | ACAAAAGGCTTAGGTGGATT+TGG | + | chr3.4:4138985-4139004 | None:intergenic | 40.0% |
| ! | AGATTCACAGCTTTGTATGG+CGG | + | chr3.4:4137152-4137171 | None:intergenic | 40.0% |
| ! | AGTGGTGGTTAGTCACATAT+TGG | - | chr3.4:4140631-4140650 | MS.gene51620:intron | 40.0% |
| ! | CAACATTTGGATGGGCTTAT+TGG | - | chr3.4:4141518-4141537 | MS.gene51620:intron | 40.0% |
| ! | CACACACATTGGTTAGGATT+TGG | + | chr3.4:4141300-4141319 | None:intergenic | 40.0% |
| ! | CCTAGATTCACAGCTTTGTA+TGG | + | chr3.4:4137155-4137174 | None:intergenic | 40.0% |
| ! | CTATCACACACACATTGGTT+AGG | + | chr3.4:4141306-4141325 | None:intergenic | 40.0% |
| ! | CTTAGGTGGATTTGGATCAT+AGG | + | chr3.4:4138977-4138996 | None:intergenic | 40.0% |
| ! | CTTTTCTCGAATCACTGACA+TGG | + | chr3.4:4138358-4138377 | None:intergenic | 40.0% |
| ! | GCTCTTCTCTCATTTGTTAG+TGG | - | chr3.4:4141115-4141134 | MS.gene51620:intron | 40.0% |
| ! | GCTTTGATTCGAACTTTGAG+GGG | + | chr3.4:4137858-4137877 | None:intergenic | 40.0% |
| ! | TCTTTTTGTAGGGGAATGGA+CGG | - | chr3.4:4141417-4141436 | MS.gene51620:CDS | 40.0% |
| !! | GCACTAACCGTTTTTAAAGG+TGG | + | chr3.4:4138097-4138116 | None:intergenic | 40.0% |
| !! | GCTTTAGAATCTCCATCCAA+TGG | + | chr3.4:4141097-4141116 | None:intergenic | 40.0% |
| !! | GGAGAGTACCAACTTACTAA+TGG | - | chr3.4:4138716-4138735 | MS.gene51620:intron | 40.0% |
| !! | TTGAGCTTTGTTTGCTTTGC+AGG | - | chr3.4:4138858-4138877 | MS.gene51620:intron | 40.0% |
| !!! | GAATCTAGGAAACTGGCTTT+TGG | - | chr3.4:4137166-4137185 | MS.gene51620:CDS | 40.0% |
| AATCAATCACAGCGACTGTC+TGG | + | chr3.4:4140544-4140563 | None:intergenic | 45.0% | |
| ACCAACAGATAGCTTTCGAC+AGG | - | chr3.4:4141621-4141640 | MS.gene51620:CDS | 45.0% | |
| ATAGAGCCCCTCAAGTCTTA+AGG | - | chr3.4:4138750-4138769 | MS.gene51620:intron | 45.0% | |
| ATAGCTTTCGACAGGATGTG+AGG | - | chr3.4:4141629-4141648 | MS.gene51620:CDS | 45.0% | |
| ATCAATCACAGCGACTGTCT+GGG | + | chr3.4:4140543-4140562 | None:intergenic | 45.0% | |
| ATTCTCGGGCAACATTTGGA+TGG | - | chr3.4:4141509-4141528 | MS.gene51620:intron | 45.0% | |
| CATCCCTATCACACACACAT+TGG | + | chr3.4:4141311-4141330 | None:intergenic | 45.0% | |
| CCACAATCACTTTCATCCCA+TGG | + | chr3.4:4140433-4140452 | None:intergenic | 45.0% | |
| CCATGGGATGAAAGTGATTG+TGG | - | chr3.4:4140430-4140449 | MS.gene51620:intron | 45.0% | |
| CTCAAGTGGATGATCGAGAA+TGG | - | chr3.4:4141571-4141590 | MS.gene51620:CDS | 45.0% | |
| GAAATGCTAACAAGTGCCCT+AGG | - | chr3.4:4139763-4139782 | MS.gene51620:CDS | 45.0% | |
| GACATATATTCTCCCGGCAA+TGG | + | chr3.4:4138152-4138171 | None:intergenic | 45.0% | |
| GTCAGAGGATTCACACTTCT+AGG | + | chr3.4:4138582-4138601 | None:intergenic | 45.0% | |
| GTGGACTTGCATGCAATTGA+AGG | - | chr3.4:4140449-4140468 | MS.gene51620:intron | 45.0% | |
| GTGTATTCTCGGGCAACATT+TGG | - | chr3.4:4141505-4141524 | MS.gene51620:intron | 45.0% | |
| GTGTCTTAATCGTTGCTGAC+AGG | + | chr3.4:4138238-4138257 | None:intergenic | 45.0% | |
| TAAGGTCTTTGTCCATTGCC+GGG | - | chr3.4:4138137-4138156 | MS.gene51620:intron | 45.0% | |
| TAGAGCCCCTCAAGTCTTAA+GGG | - | chr3.4:4138751-4138770 | MS.gene51620:intron | 45.0% | |
| TAGCTTTCGACAGGATGTGA+GGG | - | chr3.4:4141630-4141649 | MS.gene51620:CDS | 45.0% | |
| TCCTGTCGAAAGCTATCTGT+TGG | + | chr3.4:4141625-4141644 | None:intergenic | 45.0% | |
| TCTCACCCTTAAGACTTGAG+GGG | + | chr3.4:4138759-4138778 | None:intergenic | 45.0% | |
| TGTTTGCTTTGCAGGACCAT+TGG | - | chr3.4:4138866-4138885 | MS.gene51620:intron | 45.0% | |
| TTCTCGGGCAACATTTGGAT+GGG | - | chr3.4:4141510-4141529 | MS.gene51620:intron | 45.0% | |
| ! | ATCCACCTAAGCCTTTTGTC+GGG | - | chr3.4:4138986-4139005 | MS.gene51620:intron | 45.0% |
| ! | CTTTTTGTAGGGGAATGGAC+GGG | - | chr3.4:4141418-4141437 | MS.gene51620:CDS | 45.0% |
| ! | GAACATAGTGGGACAAGAGA+TGG | - | chr3.4:4140488-4140507 | MS.gene51620:intron | 45.0% |
| !! | GAAAGAGCATCAGATCTTGC+TGG | - | chr3.4:4141235-4141254 | MS.gene51620:intron | 45.0% |
| !! | AAATAGAATAATATATTAAA+TGG | + | chr3.4:4140819-4140838 | None:intergenic | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr3.4:4139194-4139213 | None:intergenic | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr3.4:4139193-4139212 | None:intergenic | 5.0% |
| AAACTTCGCCCAAGCGCAAT+TGG | - | chr3.4:4141480-4141499 | MS.gene51620:intron | 50.0% | |
| AAGACTTGAGGGGCTCTATC+TGG | + | chr3.4:4138749-4138768 | None:intergenic | 50.0% | |
| ACTGCTATTGTAGCCAACCG+TGG | - | chr3.4:4137433-4137452 | MS.gene51620:intron | 50.0% | |
| CTGTCAGGATACCTGTTGGA+TGG | - | chr3.4:4138944-4138963 | MS.gene51620:intron | 50.0% | |
| GAGCTGATGAATGAGCCACA+AGG | - | chr3.4:4140980-4140999 | MS.gene51620:CDS | 50.0% | |
| GATGCTGTCAGGATACCTGT+TGG | - | chr3.4:4138940-4138959 | MS.gene51620:intron | 50.0% | |
| TAGGCTATCCACCATCCAAC+AGG | + | chr3.4:4138958-4138977 | None:intergenic | 50.0% | |
| TCAATCACAGCGACTGTCTG+GGG | + | chr3.4:4140542-4140561 | None:intergenic | 50.0% | |
| TCAGGATACCTGTTGGATGG+TGG | - | chr3.4:4138947-4138966 | MS.gene51620:intron | 50.0% | |
| ! | ATTGCGCTTGGGCGAAGTTT+TGG | + | chr3.4:4141480-4141499 | None:intergenic | 50.0% |
| ! | TCCACCTAAGCCTTTTGTCG+GGG | - | chr3.4:4138987-4139006 | MS.gene51620:intron | 50.0% |
| !!! | AGGAAACTGGCTTTTGGCTG+AGG | - | chr3.4:4137172-4137191 | MS.gene51620:CDS | 50.0% |
| !!! | GGAAACTGGCTTTTGGCTGA+GGG | - | chr3.4:4137173-4137192 | MS.gene51620:CDS | 50.0% |
| ACCAGAAGGTGAACCACGGT+TGG | + | chr3.4:4137449-4137468 | None:intergenic | 55.0% | |
| ACCGTGGTTCACCTTCTGGT+TGG | - | chr3.4:4137449-4137468 | MS.gene51620:intron | 55.0% | |
| CCCAACCAGAAGGTGAACCA+CGG | + | chr3.4:4137453-4137472 | None:intergenic | 55.0% | |
| CTTTGTGCTGAAGATGGGGG+AGG | - | chr3.4:4137409-4137428 | MS.gene51620:intron | 55.0% | |
| GATCCCCCGACAAAAGGCTT+AGG | + | chr3.4:4138994-4139013 | None:intergenic | 55.0% | |
| GCCAAAGATCCCCCGACAAA+AGG | + | chr3.4:4139000-4139019 | None:intergenic | 55.0% | |
| ! | CCACCTAAGCCTTTTGTCGG+GGG | - | chr3.4:4138988-4139007 | MS.gene51620:intron | 55.0% |
| ! | CCGTGGTTCACCTTCTGGTT+GGG | - | chr3.4:4137450-4137469 | MS.gene51620:intron | 55.0% |
| ! | GCCTTTTGTCGGGGGATCTT+TGG | - | chr3.4:4138996-4139015 | MS.gene51620:intron | 55.0% |
| !!! | ACTGGCTTTTGGCTGAGGGA+TGG | - | chr3.4:4137177-4137196 | MS.gene51620:CDS | 55.0% |
| CCCCCGACAAAAGGCTTAGG+TGG | + | chr3.4:4138991-4139010 | None:intergenic | 60.0% | |
| GCCAACCGTGGTTCACCTTC+TGG | - | chr3.4:4137445-4137464 | MS.gene51620:intron | 60.0% | |
| TAGGGGAATGGACGGGTGAG+TGG | - | chr3.4:4141425-4141444 | MS.gene51620:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 4137140 | 4141663 | 4137140 | ID=MS.gene51620 |
| chr3.4 | mRNA | 4137140 | 4141663 | 4137140 | ID=MS.gene51620.t1;Parent=MS.gene51620 |
| chr3.4 | exon | 4141559 | 4141663 | 4141559 | ID=MS.gene51620.t1.exon1;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4141559 | 4141663 | 4141559 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4141320 | 4141439 | 4141320 | ID=MS.gene51620.t1.exon2;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4141320 | 4141439 | 4141320 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4140904 | 4141101 | 4140904 | ID=MS.gene51620.t1.exon3;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4140904 | 4141101 | 4140904 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4140031 | 4140186 | 4140031 | ID=MS.gene51620.t1.exon4;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4140031 | 4140186 | 4140031 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4139754 | 4139923 | 4139754 | ID=MS.gene51620.t1.exon5;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4139754 | 4139923 | 4139754 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4138227 | 4138376 | 4138227 | ID=MS.gene51620.t1.exon6;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4138227 | 4138376 | 4138227 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4137514 | 4137854 | 4137514 | ID=MS.gene51620.t1.exon7;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4137514 | 4137854 | 4137514 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| chr3.4 | exon | 4137140 | 4137375 | 4137140 | ID=MS.gene51620.t1.exon8;Parent=MS.gene51620.t1 |
| chr3.4 | CDS | 4137140 | 4137375 | 4137140 | ID=cds.MS.gene51620.t1;Parent=MS.gene51620.t1 |
| Gene Sequence |
| Protein sequence |
