AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54372


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54372.t1 MTR_7g005940 94.222 1073 52 1 1 1063 1 1073 0.0 2040
MS.gene54372.t1 MTR_7g005940 94.203 1035 50 1 1 1025 1 1035 0.0 1960
MS.gene54372.t1 MTR_4g083620 41.778 225 121 6 195 410 98 321 7.21e-43 160
MS.gene54372.t1 MTR_2g028940 30.130 385 261 4 682 1063 566 945 4.00e-37 152
MS.gene54372.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 3.21e-32 136
MS.gene54372.t1 MTR_2g028940 30.925 346 231 4 682 1024 566 906 2.05e-33 139
MS.gene54372.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 2.43e-32 136
MS.gene54372.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 1.32e-32 136
MS.gene54372.t1 MTR_2g028940 32.468 154 102 2 682 833 566 719 2.84e-13 74.7
MS.gene54372.t1 MTR_1g090320 28.095 420 269 13 627 1041 776 1167 1.51e-25 115
MS.gene54372.t1 MTR_1g090320 36.667 120 76 0 586 705 514 633 8.89e-21 99.8
MS.gene54372.t1 MTR_1g090320 26.141 241 137 5 200 405 15 249 4.74e-14 77.8
MS.gene54372.t1 MTR_1g090320 28.095 420 269 13 627 1041 778 1169 1.51e-25 115
MS.gene54372.t1 MTR_1g090320 36.667 120 76 0 586 705 516 635 8.45e-21 99.8
MS.gene54372.t1 MTR_1g090320 26.141 241 137 5 200 405 17 251 4.58e-14 77.8
MS.gene54372.t1 MTR_8g103227 46.739 92 47 1 562 653 374 463 1.72e-20 98.6
MS.gene54372.t1 MTR_8g103227 25.648 347 248 7 682 1025 658 997 2.62e-16 85.1
MS.gene54372.t1 MTR_7g059405 38.136 118 66 4 536 652 219 330 2.07e-15 81.3
MS.gene54372.t1 MTR_7g117890 30.675 163 104 3 587 749 257 410 2.69e-15 81.6
MS.gene54372.t1 MTR_7g078330 41.573 89 48 2 564 652 256 340 2.40e-13 74.7
MS.gene54372.t1 MTR_5g034440 29.371 143 75 4 588 729 283 400 3.06e-13 74.3
MS.gene54372.t1 MTR_4g063800 39.437 71 42 1 582 652 252 321 3.24e-12 71.2
MS.gene54372.t1 MTR_3g096370 44.286 70 36 2 584 652 9 76 4.32e-12 69.7
MS.gene54372.t1 MTR_2g436530 22.016 377 276 7 682 1057 484 843 4.88e-12 70.9
MS.gene54372.t1 MTR_4g107010 26.768 198 113 6 586 779 281 450 1.59e-11 68.9
MS.gene54372.t1 MTR_7g053260 40.580 69 40 1 584 652 77 144 1.59e-11 68.6
MS.gene54372.t1 MTR_4g085720 43.478 69 36 2 585 652 14 80 2.28e-11 67.8
MS.gene54372.t1 MTR_5g077510 41.429 70 38 2 584 652 34 101 2.28e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54372.t1 AT1G76390 38.095 105 52 4 575 672 20 118 2.07e-12 72.0
MS.gene54372.t1 AT1G76390 38.095 105 52 4 575 672 20 118 2.07e-12 72.0
MS.gene54372.t1 AT5G42340 40.000 80 47 1 573 652 278 356 8.06e-12 70.1
MS.gene54372.t1 AT1G68940 27.542 236 128 9 587 793 301 522 1.12e-11 69.7
MS.gene54372.t1 AT1G68940 27.542 236 128 9 587 793 248 469 1.14e-11 69.7
MS.gene54372.t1 AT1G68940 27.542 236 128 9 587 793 301 522 1.19e-11 69.7
MS.gene54372.t1 AT1G49780 43.478 69 36 2 585 652 14 80 2.79e-11 67.4
MS.gene54372.t1 AT3G07360 40.580 69 40 1 584 652 73 140 3.39e-11 67.4
MS.gene54372.t1 AT1G20780 37.895 95 51 3 585 672 23 116 4.63e-11 67.8
MS.gene54372.t1 AT1G20780 37.895 95 51 3 585 672 23 116 4.63e-11 67.8
MS.gene54372.t1 AT1G20780 37.895 95 51 3 585 672 23 116 4.63e-11 67.8
MS.gene54372.t1 AT1G23030 38.889 72 43 1 584 655 240 310 9.88e-11 66.2

Find 150 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTCATTATACACTTTC+TGG 0.079952 7.4:-93744181 None:intergenic
ATAGTAGGGGTTATCTTATT+TGG 0.182015 7.4:-93745141 None:intergenic
CGATCAAACGCTTCAAAATA+AGG 0.183245 7.4:-93745457 None:intergenic
GCTAAGCATATAATCTCTTT+AGG 0.228808 7.4:+93745638 MS.gene54372:CDS
AAACTTTATGATTCTTTCTT+TGG 0.229672 7.4:+93744589 MS.gene54372:CDS
ATGGAGTAGTTGATGTATTA+TGG 0.230031 7.4:+93747915 MS.gene54372:CDS
AGTATAAATGGCTTCATCTT+TGG 0.231855 7.4:+93743023 None:intergenic
ACTGTTTAAATTAGTTTCTA+TGG 0.282515 7.4:-93745058 None:intergenic
CTAAGCATATAATCTCTTTA+GGG 0.289542 7.4:+93745639 MS.gene54372:CDS
AAGTGATCCTCTTCACTCTT+TGG 0.296475 7.4:+93743128 MS.gene54372:CDS
TTCAACTTCAGTAAAATATC+AGG 0.299538 7.4:+93747382 MS.gene54372:CDS
TTGCTTTATATTACAAAGAT+TGG 0.314400 7.4:+93744225 MS.gene54372:CDS
TATAATGAAAGTTTGGATTC+AGG 0.314769 7.4:+93744191 MS.gene54372:CDS
GAGGTTTGAACAAGGAAATT+TGG 0.318367 7.4:+93745682 MS.gene54372:CDS
ATGCAGCTTAGCATTATTAC+TGG 0.324069 7.4:+93743858 MS.gene54372:CDS
AAAGGTTTGACCTGACTCTA+AGG 0.329503 7.4:-93745339 None:intergenic
GAAAGTGTATAATGAAAGTT+TGG 0.337823 7.4:+93744184 MS.gene54372:CDS
GATATTGCTCCCCTTCTTCA+TGG 0.340657 7.4:+93747896 MS.gene54372:CDS
GATATTGTTGCCTGAACTTT+GGG 0.343487 7.4:+93744052 MS.gene54372:CDS
AACTGTGAGAGAGGTTCTTA+TGG 0.343570 7.4:+93744667 MS.gene54372:CDS
TTCAAAATAAGGTTGCTAAA+TGG 0.346748 7.4:-93745446 None:intergenic
CAGATTCTCCCTATACAAAA+TGG 0.348155 7.4:-93747957 None:intergenic
GGAAGATGAAGAAGAAGAAA+TGG 0.363565 7.4:+93747093 MS.gene54372:intron
AAGAAAGCAGGTTATAATAA+TGG 0.369011 7.4:+93746880 MS.gene54372:CDS
TCTAAAGTATTTCCTGTTAC+CGG 0.369352 7.4:-93745410 None:intergenic
AACTTTCTGATTTGAAGAAA+TGG 0.370655 7.4:+93744093 MS.gene54372:CDS
CAAAGAAAAGAAGGAACAAT+TGG 0.374214 7.4:+93743413 MS.gene54372:CDS
TGACCTGACTCTAAGGTAAC+TGG 0.378146 7.4:-93745332 None:intergenic
CGATATTGTTGCCTGAACTT+TGG 0.378191 7.4:+93744051 MS.gene54372:CDS
CTTATTACACTTTGAACTAC+TGG 0.379975 7.4:+93746385 MS.gene54372:CDS
AAGATAACCCCTACTATTGA+TGG 0.384414 7.4:+93745147 MS.gene54372:CDS
CACTTCTTTCATAAGTGGCT+TGG 0.399869 7.4:+93746274 MS.gene54372:CDS
AACAGAACATGTCCGGTAAC+AGG 0.401864 7.4:+93745398 MS.gene54372:CDS
GGGTTCTTTCGTTTCTCTGT+AGG 0.417240 7.4:+93745660 MS.gene54372:CDS
ATAACCTGCTTTCTTTAAGA+TGG 0.427114 7.4:-93746872 None:intergenic
AATTCATCAGATAGTGATAG+TGG 0.427587 7.4:+93743345 MS.gene54372:CDS
AGAAATGGATGAAGAGTTCA+TGG 0.427897 7.4:+93747108 MS.gene54372:CDS
AATTCATGAACTGGTACTCT+TGG 0.428025 7.4:-93744769 None:intergenic
CATCAAGGCATGGTTTCAAA+AGG 0.431872 7.4:+93745373 MS.gene54372:CDS
TCTTGAGCTTCTTCACAGTA+AGG 0.432710 7.4:+93745802 MS.gene54372:CDS
AAGAAAACTAACCGACGAAA+TGG 0.434545 7.4:-93746959 None:intergenic
AAAGAAAAGAAGGAACAATT+GGG 0.435116 7.4:+93743414 MS.gene54372:CDS
TTCTTTCATAAGTGGCTTGG+TGG 0.436399 7.4:+93746277 MS.gene54372:CDS
TGAAGCGTTTGATCGATAAC+TGG 0.436744 7.4:+93745465 MS.gene54372:CDS
AATATCGTCCGCGCCTGAAA+AGG 0.442304 7.4:-93744035 None:intergenic
GATGTCACTTCTTTCATAAG+TGG 0.443620 7.4:+93746269 MS.gene54372:CDS
ATAAATTCCTGTGGTATGCT+TGG 0.444770 7.4:-93745278 None:intergenic
TCTGACAAGAAATATCTTTG+AGG 0.446797 7.4:+93745307 MS.gene54372:CDS
AATAGACGCTCCCAAAGTTC+AGG 0.451875 7.4:-93744062 None:intergenic
AACCTTGTCATCATTTAAGC+TGG 0.455375 7.4:-93746773 None:intergenic
CAAGGACAGCTGCAGAAGAA+TGG 0.461431 7.4:+93744995 MS.gene54372:CDS
CTTTCTAAACAGTATAATGC+TGG 0.465237 7.4:+93747262 MS.gene54372:CDS
AATGGAAACTAGTGCTTTCA+CGG 0.469991 7.4:-93743625 None:intergenic
TTCTATGTATCCATTCAGAA+TGG 0.471459 7.4:-93743643 None:intergenic
GCACTAGTTTCCATTCTGAA+TGG 0.474787 7.4:+93743633 MS.gene54372:CDS
AACTTGTTAGAATCAATGAT+TGG 0.475567 7.4:+93747133 MS.gene54372:CDS
AAAGAGAAGAATTCCAGAAA+TGG 0.476144 7.4:+93745018 MS.gene54372:CDS
TAATACCTGTCGACTCGTAA+TGG 0.478741 7.4:-93744303 None:intergenic
CAAGTGTCTAATGTGAAAAG+AGG 0.484843 7.4:+93743390 MS.gene54372:CDS
GCCGTTGATCCTCTTCATCA+AGG 0.486422 7.4:-93746927 None:intergenic
ATCTCCTAGCCTTGATGAAG+AGG 0.488093 7.4:+93746918 MS.gene54372:CDS
CTGAGAGATGATAGCTAAGA+AGG 0.488827 7.4:-93747299 None:intergenic
GGCATATAGAATTCATGAAC+TGG 0.491434 7.4:-93744778 None:intergenic
CATCAACTACTCCATGAAGA+AGG 0.492239 7.4:-93747907 None:intergenic
TTTGAATTTCATTCAACTTG+AGG 0.494489 7.4:+93743722 MS.gene54372:CDS
ACCATTGCCTGTGGCGAGAA+TGG 0.494969 7.4:-93744559 None:intergenic
GCTCAAGTTCTTCATTCTCA+AGG 0.497709 7.4:-93747333 None:intergenic
AGCATATATGAATCCTTCAA+TGG 0.500188 7.4:-93743444 None:intergenic
TCAAGATCTTCTTTCCATCA+TGG 0.500865 7.4:+93743099 MS.gene54372:CDS
CTTGTCTAATAACTGTTACA+TGG 0.501990 7.4:+93747227 MS.gene54372:CDS
ATTCCGATGGAAGGAATAGT+TGG 0.504559 7.4:-93744269 None:intergenic
GTAGTTCAAAGTGTAATAAG+AGG 0.504871 7.4:-93746382 None:intergenic
AGAATCTAAACATCTAGATA+TGG 0.504905 7.4:-93747182 None:intergenic
TCTTTCATAAGTGGCTTGGT+GGG 0.512051 7.4:+93746278 MS.gene54372:CDS
CGAATTTCCCACAGTTTGAG+AGG 0.512056 7.4:-93745522 None:intergenic
CTTTGAAAGAAAAGCCATCA+AGG 0.514152 7.4:+93745358 MS.gene54372:CDS
TTTGGAGCAGCTTCTTGCAC+AGG 0.514480 7.4:+93743041 MS.gene54372:CDS
TTCTTTCGTTTCTCTGTAGG+AGG 0.515913 7.4:+93745663 MS.gene54372:CDS
ATTATCTTCCTTGAAAGAAG+AGG 0.516340 7.4:+93745601 MS.gene54372:CDS
GAAAAGAGGCAAAGAAAAGA+AGG 0.518665 7.4:+93743404 MS.gene54372:CDS
GAACCAGTTACCTTAGAGTC+AGG 0.520909 7.4:+93745329 MS.gene54372:CDS
ATTGCTTATCTGATATCTTG+AGG 0.529217 7.4:-93743214 None:intergenic
TCAAAGATATTTCTTGTCAG+AGG 0.534699 7.4:-93745305 None:intergenic
TCATTGACAAAAGTTCAGTA+AGG 0.539896 7.4:-93745856 None:intergenic
TAATGACAGGGAAGTTCACT+TGG 0.540383 7.4:+93744505 MS.gene54372:intron
AGCAGCTTCTTGCACAGGAA+GGG 0.540666 7.4:+93743046 MS.gene54372:CDS
AAAGGGAAACAGAACATGTC+CGG 0.542373 7.4:+93745391 MS.gene54372:CDS
ACCATTCTCGCCACAGGCAA+TGG 0.544070 7.4:+93744558 MS.gene54372:CDS
CTCTGTAGGAGGTTTGAACA+AGG 0.545055 7.4:+93745674 MS.gene54372:CDS
GAGATGATAGCTAAGAAGGC+AGG 0.545629 7.4:-93747295 None:intergenic
CGACTCGTAATGGATAATGA+TGG 0.548637 7.4:-93744293 None:intergenic
ACTACCATCTTAAAGAAAGC+AGG 0.549148 7.4:+93746868 MS.gene54372:CDS
GGCATCAAGTGCCTCTGCAA+TGG 0.549842 7.4:-93746752 None:intergenic
TAATAAGAGGACAGCGATGA+GGG 0.550715 7.4:-93746369 None:intergenic
CTCAAGACTTGTAATCACCT+TGG 0.550915 7.4:-93743763 None:intergenic
ATCAACTACTCCATGAAGAA+GGG 0.554248 7.4:-93747906 None:intergenic
CTAGACATGTAGATTTGATG+AGG 0.555129 7.4:+93747203 MS.gene54372:CDS
GTTGCATATATAAGATAGCA+AGG 0.557196 7.4:+93745759 MS.gene54372:CDS
GCCTTGATGAAGAGGATCAA+CGG 0.558378 7.4:+93746926 MS.gene54372:CDS
ATCAAGGCATGGTTTCAAAA+GGG 0.559344 7.4:+93745374 MS.gene54372:CDS
TTAGAATCAATGATTGGTGA+TGG 0.561943 7.4:+93747139 MS.gene54372:CDS
ATTATCCATTACGAGTCGAC+AGG 0.568253 7.4:+93744298 MS.gene54372:CDS
TCAAACTGTGGGAAATTCGA+AGG 0.569601 7.4:+93745526 MS.gene54372:CDS
AAAGAAAAGCCATCAAGGCA+TGG 0.569716 7.4:+93745363 MS.gene54372:CDS
ATTATACTGTTTAGAAAGTG+AGG 0.571728 7.4:-93747257 None:intergenic
ACTTCAACTTCATAGACTTG+AGG 0.573701 7.4:-93744619 None:intergenic
TAGACATGTAGATTTGATGA+GGG 0.575230 7.4:+93747204 MS.gene54372:CDS
ATTATTTGTTATCATTCCAG+TGG 0.576441 7.4:-93746845 None:intergenic
TTGCATATATAAGATAGCAA+GGG 0.577003 7.4:+93745760 MS.gene54372:CDS
TGATCCTCTTCATCAAGGCT+AGG 0.580353 7.4:-93746922 None:intergenic
AATAATATTTGACAGCGGAA+AGG 0.581020 7.4:+93744967 MS.gene54372:intron
CAACGAACCATTCTCGCCAC+AGG 0.582453 7.4:+93744552 MS.gene54372:CDS
AATGATGGAATTCCGATGGA+AGG 0.584929 7.4:-93744278 None:intergenic
AGCTTTGAAAACTGTGAGAG+AGG 0.585518 7.4:+93744658 MS.gene54372:CDS
TACAAAGATTGGCTCAGTGA+AGG 0.585870 7.4:+93744236 MS.gene54372:CDS
GAGCAGCTTCTTGCACAGGA+AGG 0.586816 7.4:+93743045 MS.gene54372:CDS
GCTATCATCTCTCAGCTGAA+AGG 0.587912 7.4:+93747307 MS.gene54372:CDS
GGATAATGATGGAATTCCGA+TGG 0.588555 7.4:-93744282 None:intergenic
CTATCTTCCAAAGAGTGAAG+AGG 0.591307 7.4:-93743135 None:intergenic
GGAAACAAGTTAAATAACGA+AGG 0.597175 7.4:+93743285 MS.gene54372:CDS
GATCACTTGAATTACCATGA+TGG 0.601325 7.4:-93743113 None:intergenic
ATATGCAACTAGAATCTGAT+CGG 0.602029 7.4:-93745745 None:intergenic
ATATTCTCCAAGCATACCAC+AGG 0.604413 7.4:+93745271 MS.gene54372:CDS
TATATGCTTAGACAATTGAG+TGG 0.608616 7.4:+93743459 MS.gene54372:CDS
CAGGAAGGGTTCAAAGCAAG+CGG 0.609110 7.4:+93743060 MS.gene54372:CDS
TTTCTTACCATCAATAGTAG+GGG 0.612144 7.4:-93745154 None:intergenic
TGCCAGCTTAAATGATGACA+AGG 0.619717 7.4:+93746771 MS.gene54372:CDS
GTTTAGCATATACATAGAGA+TGG 0.619765 7.4:+93746720 MS.gene54372:CDS
GAAACAAGTTAAATAACGAA+GGG 0.623558 7.4:+93743286 MS.gene54372:CDS
ACTCCAACTATTCCTTCCAT+CGG 0.626415 7.4:+93744266 MS.gene54372:CDS
AGAGCGCAATTCTGAGACCA+AGG 0.627342 7.4:+93743746 MS.gene54372:CDS
TGCATATATAAGATAGCAAG+GGG 0.634241 7.4:+93745761 MS.gene54372:CDS
TCAACTACTCCATGAAGAAG+GGG 0.634314 7.4:-93747905 None:intergenic
TTTGAGAGGCAAAATCAAGA+AGG 0.635942 7.4:-93745508 None:intergenic
TAAGCATATAATCTCTTTAG+GGG 0.637602 7.4:+93745640 MS.gene54372:CDS
GCTAAATGTAACCATTTCGT+CGG 0.644677 7.4:+93746948 MS.gene54372:CDS
CTGTGGCGAGAATGGTTCGT+TGG 0.657069 7.4:-93744551 None:intergenic
GAAGAAATGGTATGACAACA+AGG 0.658330 7.4:+93744106 MS.gene54372:CDS
GACAGCGGAAAGGAACATCA+AGG 0.658940 7.4:+93744977 MS.gene54372:intron
AAGTTGAATGAAATTCAAAG+AGG 0.660155 7.4:-93743718 None:intergenic
CAAGCGGCAGAAAAGTGCAA+AGG 0.663772 7.4:+93743076 MS.gene54372:CDS
GTAATAAGAGGACAGCGATG+AGG 0.664032 7.4:-93746370 None:intergenic
TCAAAGAGGAGAAACAATTG+TGG 0.665172 7.4:-93743704 None:intergenic
GGCTGTGAATGCCATTGCAG+AGG 0.666777 7.4:+93746741 MS.gene54372:CDS
CTATGAAGTTGAAGTTGATG+AGG 0.667707 7.4:+93744627 MS.gene54372:CDS
AAGAAAAGAAGGAACAATTG+GGG 0.676981 7.4:+93743415 MS.gene54372:CDS
AGAAAAGAAGGAACAATTGG+GGG 0.678559 7.4:+93743416 MS.gene54372:CDS
AGAGGACAAATAAATTCCTG+TGG 0.684769 7.4:-93745287 None:intergenic
AATAAGAGGACAGCGATGAG+GGG 0.685162 7.4:-93746368 None:intergenic
GGATCAAATATACAACACTG+AGG 0.761941 7.4:-93743959 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAAAGACAAAA+AGG - chr7.4:93744820-93744839 None:intergenic 10.0%
!!! TTCATTTTACATAAAATTTT+TGG + chr7.4:93745239-93745258 MS.gene54372:intron 10.0%
!! ACTAAAATATTCAAATTCAT+TGG + chr7.4:93747577-93747596 MS.gene54372:intron 15.0%
!!! ACTATAAATAATTTTACTGT+AGG - chr7.4:93744871-93744890 None:intergenic 15.0%
!!! AGATTTTTATCACAAATAAA+TGG - chr7.4:93747421-93747440 None:intergenic 15.0%
!!! AGTGATAATAATGTTTTTAT+AGG + chr7.4:93743264-93743283 MS.gene54372:CDS 15.0%
!!! CTTTTTGTTTTTTGTTTTAA+TGG + chr7.4:93746979-93746998 MS.gene54372:intron 15.0%
!!! TATTAATGTTTTTTTAACGA+TGG - chr7.4:93744698-93744717 None:intergenic 15.0%
!! AAACTTTATGATTCTTTCTT+TGG + chr7.4:93744589-93744608 MS.gene54372:CDS 20.0%
!! ATCGTAAAAAAGTTAATAAG+TGG + chr7.4:93747664-93747683 MS.gene54372:intron 20.0%
!! ATTGAATTTCATTCATTGTT+TGG - chr7.4:93746637-93746656 None:intergenic 20.0%
!! GATAAAAATCTTGCTAATTT+CGG + chr7.4:93747430-93747449 MS.gene54372:intron 20.0%
!! TCATATCTATAAACTAGTAT+CGG - chr7.4:93747777-93747796 None:intergenic 20.0%
!! TCATTTAGTTAAAAAATGAC+AGG + chr7.4:93747072-93747091 MS.gene54372:intron 20.0%
!! TCTTTCGAAATATTATTTAC+TGG + chr7.4:93746223-93746242 MS.gene54372:intron 20.0%
!! TTGCTTTATATTACAAAGAT+TGG + chr7.4:93744225-93744244 MS.gene54372:CDS 20.0%
!!! AATAGTATTGCATTTTTTGT+TGG - chr7.4:93745836-93745855 None:intergenic 20.0%
!!! ACTGTTTAAATTAGTTTCTA+TGG - chr7.4:93745061-93745080 None:intergenic 20.0%
!!! ATACATAGAAAGTTTTCTAA+CGG + chr7.4:93743656-93743675 MS.gene54372:CDS 20.0%
!!! ATAGTATTGCATTTTTTGTT+GGG - chr7.4:93745835-93745854 None:intergenic 20.0%
!!! CTATTTATTTTGTAGAAGAA+AGG + chr7.4:93746247-93746266 MS.gene54372:intron 20.0%
!!! GTGAGATTTTTATCAAATTT+TGG + chr7.4:93745883-93745902 MS.gene54372:intron 20.0%
!!! TTACATAAAATTTTTGGTGT+AGG + chr7.4:93745245-93745264 MS.gene54372:intron 20.0%
!!! TTGTTATCTTCATTTTCTTA+TGG - chr7.4:93744435-93744454 None:intergenic 20.0%
! AAAGAAAAGAAGGAACAATT+GGG + chr7.4:93743414-93743433 MS.gene54372:CDS 25.0%
! AAAGTCTCTTTAACATTGAA+GGG - chr7.4:93746585-93746604 None:intergenic 25.0%
! AAATGACACATATAATGAGA+CGG - chr7.4:93747489-93747508 None:intergenic 25.0%
! AACTTTCATTATACACTTTC+TGG - chr7.4:93744184-93744203 None:intergenic 25.0%
! AAGAAAGCAGGTTATAATAA+TGG + chr7.4:93746880-93746899 MS.gene54372:CDS 25.0%
! AAGTTGAATGAAATTCAAAG+AGG - chr7.4:93743721-93743740 None:intergenic 25.0%
! AATATTCAAATTCATTGGAG+TGG + chr7.4:93747582-93747601 MS.gene54372:intron 25.0%
! AGAATCTAAACATCTAGATA+TGG - chr7.4:93747185-93747204 None:intergenic 25.0%
! ATAGACTGTTCAATATTTAG+AGG - chr7.4:93746530-93746549 None:intergenic 25.0%
! ATATTTAAAGATCAAGTGAC+TGG + chr7.4:93746553-93746572 MS.gene54372:intron 25.0%
! ATTATACTGTTTAGAAAGTG+AGG - chr7.4:93747260-93747279 None:intergenic 25.0%
! CAAATAGAGGTTATAAATAG+CGG + chr7.4:93746024-93746043 MS.gene54372:intron 25.0%
! CCAAAGAAAAAAGAAAGTTT+CGG + chr7.4:93743980-93743999 MS.gene54372:CDS 25.0%
! CTAAGCATATAATCTCTTTA+GGG + chr7.4:93745639-93745658 MS.gene54372:CDS 25.0%
! GAAACAAGTTAAATAACGAA+GGG + chr7.4:93743286-93743305 MS.gene54372:CDS 25.0%
! GATATTCCAAAGTGAAAAAT+AGG + chr7.4:93747693-93747712 MS.gene54372:intron 25.0%
! GTTATAAATAGCGGTTATAA+CGG + chr7.4:93746033-93746052 MS.gene54372:intron 25.0%
! TAAGCATATAATCTCTTTAG+GGG + chr7.4:93745640-93745659 MS.gene54372:CDS 25.0%
! TATAATGAAAGTTTGGATTC+AGG + chr7.4:93744191-93744210 MS.gene54372:CDS 25.0%
! TTAGAGATAAAGTCAGTTAA+TGG - chr7.4:93744488-93744507 None:intergenic 25.0%
! TTATCACAAATAAATGGTGA+TGG - chr7.4:93747415-93747434 None:intergenic 25.0%
! TTCAAAATAAGGTTGCTAAA+TGG - chr7.4:93745449-93745468 None:intergenic 25.0%
! TTCAACTTCAGTAAAATATC+AGG + chr7.4:93747382-93747401 MS.gene54372:CDS 25.0%
! TTGATCGATAATGAATACAA+AGG + chr7.4:93744390-93744409 MS.gene54372:intron 25.0%
! TTGCATATATAAGATAGCAA+GGG + chr7.4:93745760-93745779 MS.gene54372:CDS 25.0%
! TTTGAATTTCATTCAACTTG+AGG + chr7.4:93743722-93743741 MS.gene54372:CDS 25.0%
!! AACTTTCTGATTTGAAGAAA+TGG + chr7.4:93744093-93744112 MS.gene54372:CDS 25.0%
!! ATGTATATGCTAAACTTTTG+AGG - chr7.4:93746715-93746734 None:intergenic 25.0%
!! GAAAGTGTATAATGAAAGTT+TGG + chr7.4:93744184-93744203 MS.gene54372:CDS 25.0%
!! TATTTTACTGAAGTTGAACA+AGG - chr7.4:93747380-93747399 None:intergenic 25.0%
!! TTTTCTTACCATCAATAGTA+GGG - chr7.4:93745158-93745177 None:intergenic 25.0%
!! TTTTTCTTACCATCAATAGT+AGG - chr7.4:93745159-93745178 None:intergenic 25.0%
!!! AAAATCCATTTGTTATCTGA+AGG - chr7.4:93745204-93745223 None:intergenic 25.0%
!!! AACTTGTTAGAATCAATGAT+TGG + chr7.4:93747133-93747152 MS.gene54372:CDS 25.0%
!!! ATTATTTGTTATCATTCCAG+TGG - chr7.4:93746848-93746867 None:intergenic 25.0%
!!! ATTTCATTTGCTTTTTCATG+TGG - chr7.4:93745102-93745121 None:intergenic 25.0%
!!! CAAAACACTTTTGAAGATTA+TGG + chr7.4:93747868-93747887 MS.gene54372:CDS 25.0%
!!! CTCATTATATGTGTCATTTT+AGG + chr7.4:93747490-93747509 MS.gene54372:intron 25.0%
!!! TAGTATTGCATTTTTTGTTG+GGG - chr7.4:93745834-93745853 None:intergenic 25.0%
!!! TTGAGGTTGTTTTTATAAGA+GGG + chr7.4:93746488-93746507 MS.gene54372:intron 25.0%
AAAGAGAAGAATTCCAGAAA+TGG + chr7.4:93745018-93745037 MS.gene54372:CDS 30.0%
AAAGGTGAAATTATTACCAC+AGG - chr7.4:93744802-93744821 None:intergenic 30.0%
AAGAAAAGAAGGAACAATTG+GGG + chr7.4:93743415-93743434 MS.gene54372:CDS 30.0%
AATAATATTTGACAGCGGAA+AGG + chr7.4:93744967-93744986 MS.gene54372:intron 30.0%
AATTCATCAGATAGTGATAG+TGG + chr7.4:93743345-93743364 MS.gene54372:CDS 30.0%
AGATAAAGTCAGTTAATGGT+TGG - chr7.4:93744484-93744503 None:intergenic 30.0%
AGCATATATGAATCCTTCAA+TGG - chr7.4:93743447-93743466 None:intergenic 30.0%
ATAGTAGGGGTTATCTTATT+TGG - chr7.4:93745144-93745163 None:intergenic 30.0%
ATATGCAACTAGAATCTGAT+CGG - chr7.4:93745748-93745767 None:intergenic 30.0%
ATTATCTTCCTTGAAAGAAG+AGG + chr7.4:93745601-93745620 MS.gene54372:CDS 30.0%
ATTGCTTATCTGATATCTTG+AGG - chr7.4:93743217-93743236 None:intergenic 30.0%
CAAAGAAAAGAAGGAACAAT+TGG + chr7.4:93743413-93743432 MS.gene54372:CDS 30.0%
CAGAATAGTGTTATCAATGA+CGG - chr7.4:93746191-93746210 None:intergenic 30.0%
CTGTCAATAATATTTGACAG+CGG + chr7.4:93744962-93744981 MS.gene54372:intron 30.0%
CTTATTACACTTTGAACTAC+TGG + chr7.4:93746385-93746404 MS.gene54372:CDS 30.0%
CTTCAGTAAAATATCAGGTT+CGG + chr7.4:93747387-93747406 MS.gene54372:intron 30.0%
CTTGTCTAATAACTGTTACA+TGG + chr7.4:93747227-93747246 MS.gene54372:CDS 30.0%
CTTTCTAAACAGTATAATGC+TGG + chr7.4:93747262-93747281 MS.gene54372:CDS 30.0%
GAAAGTCTCTTTAACATTGA+AGG - chr7.4:93746586-93746605 None:intergenic 30.0%
GCTAAGCATATAATCTCTTT+AGG + chr7.4:93745638-93745657 MS.gene54372:CDS 30.0%
GGAAACAAGTTAAATAACGA+AGG + chr7.4:93743285-93743304 MS.gene54372:CDS 30.0%
GTAGTTCAAAGTGTAATAAG+AGG - chr7.4:93746385-93746404 None:intergenic 30.0%
GTATCAATGTTGTCAAATAG+AGG + chr7.4:93746011-93746030 MS.gene54372:intron 30.0%
GTCACTTAATGAATGTATCT+AGG + chr7.4:93747042-93747061 MS.gene54372:intron 30.0%
GTTGCATATATAAGATAGCA+AGG + chr7.4:93745759-93745778 MS.gene54372:CDS 30.0%
GTTTAGCATATACATAGAGA+TGG + chr7.4:93746720-93746739 MS.gene54372:CDS 30.0%
TAGACATGTAGATTTGATGA+GGG + chr7.4:93747204-93747223 MS.gene54372:CDS 30.0%
TATATGCTTAGACAATTGAG+TGG + chr7.4:93743459-93743478 MS.gene54372:CDS 30.0%
TATGGACTCTTGTATAAACA+AGG - chr7.4:93744417-93744436 None:intergenic 30.0%
TATTGACAGTGTGAAATATG+AGG - chr7.4:93744951-93744970 None:intergenic 30.0%
TCAAAGATATTTCTTGTCAG+AGG - chr7.4:93745308-93745327 None:intergenic 30.0%
TCATTGACAAAAGTTCAGTA+AGG - chr7.4:93745859-93745878 None:intergenic 30.0%
TCTGACAAGAAATATCTTTG+AGG + chr7.4:93745307-93745326 MS.gene54372:CDS 30.0%
TGACTTTATCTCTAATGACA+GGG + chr7.4:93744493-93744512 MS.gene54372:intron 30.0%
TGCATATATAAGATAGCAAG+GGG + chr7.4:93745761-93745780 MS.gene54372:CDS 30.0%
TTAGAATCAATGATTGGTGA+TGG + chr7.4:93747139-93747158 MS.gene54372:CDS 30.0%
TTCTATGTATCCATTCAGAA+TGG - chr7.4:93743646-93743665 None:intergenic 30.0%
TTTCTTACCATCAATAGTAG+GGG - chr7.4:93745157-93745176 None:intergenic 30.0%
! ATAACCTGCTTTCTTTAAGA+TGG - chr7.4:93746875-93746894 None:intergenic 30.0%
! ATGGAGTAGTTGATGTATTA+TGG + chr7.4:93747915-93747934 MS.gene54372:CDS 30.0%
! GTGGACTGTCTAATTAAATA+AGG + chr7.4:93747636-93747655 MS.gene54372:intron 30.0%
! TCTAAAGTATTTCCTGTTAC+CGG - chr7.4:93745413-93745432 None:intergenic 30.0%
! TGATTTTTCCTCTTCTTTCA+AGG - chr7.4:93745612-93745631 None:intergenic 30.0%
! TTTTATCAGTGATGTACACT+TGG - chr7.4:93745946-93745965 None:intergenic 30.0%
!! CAGATAACAAATGGATTTTC+TGG + chr7.4:93745205-93745224 MS.gene54372:intron 30.0%
!! TCTCAACCTATTTTTCACTT+TGG - chr7.4:93747702-93747721 None:intergenic 30.0%
!! TTCTAACGGATGAAGATTTT+CGG + chr7.4:93743670-93743689 MS.gene54372:CDS 30.0%
!!! AGAGCTATTTTAATCTTGTG+TGG + chr7.4:93746811-93746830 MS.gene54372:CDS 30.0%
!!! ATATTTTCTAGTGCCATTTC+TGG - chr7.4:93745034-93745053 None:intergenic 30.0%
!!! CCGAAACTTTCTTTTTTCTT+TGG - chr7.4:93743983-93744002 None:intergenic 30.0%
!!! GTTGAGGTTGTTTTTATAAG+AGG + chr7.4:93746487-93746506 MS.gene54372:intron 30.0%
AACCTTGTCATCATTTAAGC+TGG - chr7.4:93746776-93746795 None:intergenic 35.0%
AAGAAAACTAACCGACGAAA+TGG - chr7.4:93746962-93746981 None:intergenic 35.0%
AAGATAACCCCTACTATTGA+TGG + chr7.4:93745147-93745166 MS.gene54372:CDS 35.0%
AATGGAAACTAGTGCTTTCA+CGG - chr7.4:93743628-93743647 None:intergenic 35.0%
AATTCATGAACTGGTACTCT+TGG - chr7.4:93744772-93744791 None:intergenic 35.0%
ACTACCATCTTAAAGAAAGC+AGG + chr7.4:93746868-93746887 MS.gene54372:CDS 35.0%
ACTTCAACTTCATAGACTTG+AGG - chr7.4:93744622-93744641 None:intergenic 35.0%
AGAAAAGAAGGAACAATTGG+GGG + chr7.4:93743416-93743435 MS.gene54372:CDS 35.0%
AGAAATGGATGAAGAGTTCA+TGG + chr7.4:93747108-93747127 MS.gene54372:CDS 35.0%
AGAGGACAAATAAATTCCTG+TGG - chr7.4:93745290-93745309 None:intergenic 35.0%
AGCTTCCTTCAGATAACAAA+TGG + chr7.4:93745196-93745215 MS.gene54372:intron 35.0%
ATAAATTCCTGTGGTATGCT+TGG - chr7.4:93745281-93745300 None:intergenic 35.0%
ATCAACTACTCCATGAAGAA+GGG - chr7.4:93747909-93747928 None:intergenic 35.0%
ATCAAGGCATGGTTTCAAAA+GGG + chr7.4:93745374-93745393 MS.gene54372:CDS 35.0%
ATGCAGCTTAGCATTATTAC+TGG + chr7.4:93743858-93743877 MS.gene54372:CDS 35.0%
CAAGTGTCTAATGTGAAAAG+AGG + chr7.4:93743390-93743409 MS.gene54372:CDS 35.0%
CAGATTCTCCCTATACAAAA+TGG - chr7.4:93747960-93747979 None:intergenic 35.0%
CGATCAAACGCTTCAAAATA+AGG - chr7.4:93745460-93745479 None:intergenic 35.0%
CTAGACATGTAGATTTGATG+AGG + chr7.4:93747203-93747222 MS.gene54372:CDS 35.0%
CTGACTTTATCTCTAATGAC+AGG + chr7.4:93744492-93744511 MS.gene54372:intron 35.0%
GAAAAGAGGCAAAGAAAAGA+AGG + chr7.4:93743404-93743423 MS.gene54372:CDS 35.0%
GAAGAAATGGTATGACAACA+AGG + chr7.4:93744106-93744125 MS.gene54372:CDS 35.0%
GAGGTTTGAACAAGGAAATT+TGG + chr7.4:93745682-93745701 MS.gene54372:CDS 35.0%
GATATTGTTGCCTGAACTTT+GGG + chr7.4:93744052-93744071 MS.gene54372:CDS 35.0%
GATCACTTGAATTACCATGA+TGG - chr7.4:93743116-93743135 None:intergenic 35.0%
GCTAAATGTAACCATTTCGT+CGG + chr7.4:93746948-93746967 MS.gene54372:CDS 35.0%
GGAAGATGAAGAAGAAGAAA+TGG + chr7.4:93747093-93747112 MS.gene54372:intron 35.0%
GGATCAAATATACAACACTG+AGG - chr7.4:93743962-93743981 None:intergenic 35.0%
GGCATATAGAATTCATGAAC+TGG - chr7.4:93744781-93744800 None:intergenic 35.0%
GTAGTAAAGTAGTAGTTAGG+TGG + chr7.4:93747617-93747636 MS.gene54372:intron 35.0%
GTGGTAGTAAAGTAGTAGTT+AGG + chr7.4:93747614-93747633 MS.gene54372:intron 35.0%
TCAAAGAGGAGAAACAATTG+TGG - chr7.4:93743707-93743726 None:intergenic 35.0%
TCAAGATCTTCTTTCCATCA+TGG + chr7.4:93743099-93743118 MS.gene54372:CDS 35.0%
TCATGAATTCTATATGCCTG+TGG + chr7.4:93744783-93744802 MS.gene54372:intron 35.0%
TCATTCCAGTGGAAGAAAAA+TGG - chr7.4:93746837-93746856 None:intergenic 35.0%
TTTGAGAGGCAAAATCAAGA+AGG - chr7.4:93745511-93745530 None:intergenic 35.0%
! CTCTTTTCACATTAGACACT+TGG - chr7.4:93743392-93743411 None:intergenic 35.0%
! CTGAACTTTTGTCAATGAAG+AGG + chr7.4:93745861-93745880 MS.gene54372:CDS 35.0%
! CTTTGAAAGAAAAGCCATCA+AGG + chr7.4:93745358-93745377 MS.gene54372:CDS 35.0%
! GATGTCACTTCTTTCATAAG+TGG + chr7.4:93746269-93746288 MS.gene54372:CDS 35.0%
! TAAGTTAAAAAAGCGCGATG+AGG + chr7.4:93745553-93745572 MS.gene54372:CDS 35.0%
!! CATAAAGTGCTGTCAAATAG+TGG + chr7.4:93746113-93746132 MS.gene54372:intron 35.0%
!! CTATGAAGTTGAAGTTGATG+AGG + chr7.4:93744627-93744646 MS.gene54372:CDS 35.0%
!! CTTGATGGCTTTTCTTTCAA+AGG - chr7.4:93745360-93745379 None:intergenic 35.0%
!!! AACTGCATGCCATTTTGTAT+AGG + chr7.4:93747948-93747967 MS.gene54372:CDS 35.0%
!!! ACTGCATGCCATTTTGTATA+GGG + chr7.4:93747949-93747968 MS.gene54372:CDS 35.0%
!!! GCTATCGTTTTCAAGTTACA+AGG + chr7.4:93745575-93745594 MS.gene54372:CDS 35.0%
AAAGAAAAGCCATCAAGGCA+TGG + chr7.4:93745363-93745382 MS.gene54372:CDS 40.0%
AAAGGGAAACAGAACATGTC+CGG + chr7.4:93745391-93745410 MS.gene54372:CDS 40.0%
AAAGGTTTGACCTGACTCTA+AGG - chr7.4:93745342-93745361 None:intergenic 40.0%
AACAACCTCAACATCATGCA+AGG - chr7.4:93746479-93746498 None:intergenic 40.0%
AACTGTGAGAGAGGTTCTTA+TGG + chr7.4:93744667-93744686 MS.gene54372:CDS 40.0%
AAGTGATCCTCTTCACTCTT+TGG + chr7.4:93743128-93743147 MS.gene54372:CDS 40.0%
ACTCCAACTATTCCTTCCAT+CGG + chr7.4:93744266-93744285 MS.gene54372:CDS 40.0%
ATATTCTCCAAGCATACCAC+AGG + chr7.4:93745271-93745290 MS.gene54372:CDS 40.0%
ATTATCCATTACGAGTCGAC+AGG + chr7.4:93744298-93744317 MS.gene54372:CDS 40.0%
ATTCCGATGGAAGGAATAGT+TGG - chr7.4:93744272-93744291 None:intergenic 40.0%
ATTGGAGTGGTTGAAAGTAG+TGG + chr7.4:93747595-93747614 MS.gene54372:intron 40.0%
CACTTCTTTCATAAGTGGCT+TGG + chr7.4:93746274-93746293 MS.gene54372:CDS 40.0%
CATCAACTACTCCATGAAGA+AGG - chr7.4:93747910-93747929 None:intergenic 40.0%
CATCAAGGCATGGTTTCAAA+AGG + chr7.4:93745373-93745392 MS.gene54372:CDS 40.0%
CGATATTGTTGCCTGAACTT+TGG + chr7.4:93744051-93744070 MS.gene54372:CDS 40.0%
CTAGAACATATTTGCACTGC+AGG + chr7.4:93746681-93746700 MS.gene54372:intron 40.0%
CTATCTTCCAAAGAGTGAAG+AGG - chr7.4:93743138-93743157 None:intergenic 40.0%
CTCAAGACTTGTAATCACCT+TGG - chr7.4:93743766-93743785 None:intergenic 40.0%
CTGAGAGATGATAGCTAAGA+AGG - chr7.4:93747302-93747321 None:intergenic 40.0%
GACACATATAATGAGACGGA+GGG - chr7.4:93747485-93747504 None:intergenic 40.0%
GCTCAAGTTCTTCATTCTCA+AGG - chr7.4:93747336-93747355 None:intergenic 40.0%
GGTTGAGACAATGCAATGAT+CGG + chr7.4:93747714-93747733 MS.gene54372:intron 40.0%
TAATAAGAGGACAGCGATGA+GGG - chr7.4:93746372-93746391 None:intergenic 40.0%
TAATGACAGGGAAGTTCACT+TGG + chr7.4:93744505-93744524 MS.gene54372:intron 40.0%
TCAAACTGTGGGAAATTCGA+AGG + chr7.4:93745526-93745545 MS.gene54372:CDS 40.0%
TCAACTACTCCATGAAGAAG+GGG - chr7.4:93747908-93747927 None:intergenic 40.0%
TCTTGAGCTTCTTCACAGTA+AGG + chr7.4:93745802-93745821 MS.gene54372:CDS 40.0%
TGACACATATAATGAGACGG+AGG - chr7.4:93747486-93747505 None:intergenic 40.0%
TGCCAGCTTAAATGATGACA+AGG + chr7.4:93746771-93746790 MS.gene54372:CDS 40.0%
TGCTACATCAAGCATATGAG+TGG - chr7.4:93744906-93744925 None:intergenic 40.0%
TTCTTTCGTTTCTCTGTAGG+AGG + chr7.4:93745663-93745682 MS.gene54372:CDS 40.0%
! AACGGATGAAGATTTTCGGT+CGG + chr7.4:93743674-93743693 MS.gene54372:CDS 40.0%
! AATGATGGAATTCCGATGGA+AGG - chr7.4:93744281-93744300 None:intergenic 40.0%
! CTCAAGTACGATTTTACGTG+CGG + chr7.4:93743897-93743916 MS.gene54372:CDS 40.0%
! GATTTTGCCTCTCAAACTGT+GGG + chr7.4:93745515-93745534 MS.gene54372:CDS 40.0%
! GCACTAGTTTCCATTCTGAA+TGG + chr7.4:93743633-93743652 MS.gene54372:CDS 40.0%
! GGATAATGATGGAATTCCGA+TGG - chr7.4:93744285-93744304 None:intergenic 40.0%
! TACAAAGATTGGCTCAGTGA+AGG + chr7.4:93744236-93744255 MS.gene54372:CDS 40.0%
! TCAAGTACGATTTTACGTGC+GGG + chr7.4:93743898-93743917 MS.gene54372:CDS 40.0%
! TGAAGCGTTTGATCGATAAC+TGG + chr7.4:93745465-93745484 MS.gene54372:CDS 40.0%
! TGATTTTGCCTCTCAAACTG+TGG + chr7.4:93745514-93745533 MS.gene54372:CDS 40.0%
! TTCTTTCATAAGTGGCTTGG+TGG + chr7.4:93746277-93746296 MS.gene54372:CDS 40.0%
!! AGCTTTGAAAACTGTGAGAG+AGG + chr7.4:93744658-93744677 MS.gene54372:CDS 40.0%
!! CGACTCGTAATGGATAATGA+TGG - chr7.4:93744296-93744315 None:intergenic 40.0%
!! TAATACCTGTCGACTCGTAA+TGG - chr7.4:93744306-93744325 None:intergenic 40.0%
!! TCTTTCATAAGTGGCTTGGT+GGG + chr7.4:93746278-93746297 MS.gene54372:CDS 40.0%
!!! CTTTTGAAACCATGCCTTGA+TGG - chr7.4:93745375-93745394 None:intergenic 40.0%
AACAGAACATGTCCGGTAAC+AGG + chr7.4:93745398-93745417 MS.gene54372:CDS 45.0%
AATAAGAGGACAGCGATGAG+GGG - chr7.4:93746371-93746390 None:intergenic 45.0%
AATAGACGCTCCCAAAGTTC+AGG - chr7.4:93744065-93744084 None:intergenic 45.0%
ATTGGGGGAAAAGCCATTGA+AGG + chr7.4:93743431-93743450 MS.gene54372:CDS 45.0%
CACAGAAAAAACTGCTGCTG+AGG + chr7.4:93743800-93743819 MS.gene54372:CDS 45.0%
CGAATTTCCCACAGTTTGAG+AGG - chr7.4:93745525-93745544 None:intergenic 45.0%
CTCTGTAGGAGGTTTGAACA+AGG + chr7.4:93745674-93745693 MS.gene54372:CDS 45.0%
GAACCAGTTACCTTAGAGTC+AGG + chr7.4:93745329-93745348 MS.gene54372:CDS 45.0%
GAGATGATAGCTAAGAAGGC+AGG - chr7.4:93747298-93747317 None:intergenic 45.0%
GATATTGCTCCCCTTCTTCA+TGG + chr7.4:93747896-93747915 MS.gene54372:CDS 45.0%
GCCTTGATGAAGAGGATCAA+CGG + chr7.4:93746926-93746945 MS.gene54372:CDS 45.0%
GCTATCATCTCTCAGCTGAA+AGG + chr7.4:93747307-93747326 MS.gene54372:CDS 45.0%
GGGTTCTTTCGTTTCTCTGT+AGG + chr7.4:93745660-93745679 MS.gene54372:CDS 45.0%
GTAATAAGAGGACAGCGATG+AGG - chr7.4:93746373-93746392 None:intergenic 45.0%
TGATCCTCTTCATCAAGGCT+AGG - chr7.4:93746925-93746944 None:intergenic 45.0%
! GTTTTGCGACTCTCCTTTTC+AGG + chr7.4:93744022-93744041 MS.gene54372:CDS 45.0%
! TTTTTGCTGACCATTGCCTG+TGG - chr7.4:93744571-93744590 None:intergenic 45.0%
!! ATCTCCTAGCCTTGATGAAG+AGG + chr7.4:93746918-93746937 MS.gene54372:CDS 45.0%
!! CTTAGCCTTGCATGATGTTG+AGG + chr7.4:93746471-93746490 MS.gene54372:intron 45.0%
!! TGACCTGACTCTAAGGTAAC+TGG - chr7.4:93745335-93745354 None:intergenic 45.0%
!!! TGTGGCCATTTTTCTTCCAC+TGG + chr7.4:93746829-93746848 MS.gene54372:CDS 45.0%
AATATCGTCCGCGCCTGAAA+AGG - chr7.4:93744038-93744057 None:intergenic 50.0%
AGCAGCTTCTTGCACAGGAA+GGG + chr7.4:93743046-93743065 MS.gene54372:CDS 50.0%
ATAACGGCGCTATAGCGTAG+TGG + chr7.4:93746049-93746068 MS.gene54372:intron 50.0%
CAAGGACAGCTGCAGAAGAA+TGG + chr7.4:93744995-93745014 MS.gene54372:CDS 50.0%
CAGGAAGGGTTCAAAGCAAG+CGG + chr7.4:93743060-93743079 MS.gene54372:CDS 50.0%
GACAGCGGAAAGGAACATCA+AGG + chr7.4:93744977-93744996 MS.gene54372:intron 50.0%
GCCGTTGATCCTCTTCATCA+AGG - chr7.4:93746930-93746949 None:intergenic 50.0%
! CAAGCGGCAGAAAAGTGCAA+AGG + chr7.4:93743076-93743095 MS.gene54372:CDS 50.0%
! GCGATGAGGGGCTTTTCAAT+TGG - chr7.4:93746359-93746378 None:intergenic 50.0%
! TGACGGATCGCAGAGTATAG+CGG - chr7.4:93746174-93746193 None:intergenic 50.0%
! TTTGGAGCAGCTTCTTGCAC+AGG + chr7.4:93743041-93743060 MS.gene54372:CDS 50.0%
!! AGAGCGCAATTCTGAGACCA+AGG + chr7.4:93743746-93743765 MS.gene54372:CDS 50.0%
ACCATTCTCGCCACAGGCAA+TGG + chr7.4:93744558-93744577 MS.gene54372:CDS 55.0%
ACCATTGCCTGTGGCGAGAA+TGG - chr7.4:93744562-93744581 None:intergenic 55.0%
CAACGAACCATTCTCGCCAC+AGG + chr7.4:93744552-93744571 MS.gene54372:CDS 55.0%
CTGTGGCGAGAATGGTTCGT+TGG - chr7.4:93744554-93744573 None:intergenic 55.0%
GAGCAGCTTCTTGCACAGGA+AGG + chr7.4:93743045-93743064 MS.gene54372:CDS 55.0%
GGCATCAAGTGCCTCTGCAA+TGG - chr7.4:93746755-93746774 None:intergenic 55.0%
GGCTGTGAATGCCATTGCAG+AGG + chr7.4:93746741-93746760 MS.gene54372:CDS 55.0%
!! GCGACTCTCCTTTTCAGGCG+CGG + chr7.4:93744027-93744046 MS.gene54372:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 93743030 93747982 93743030 ID=MS.gene54372
chr7.4 mRNA 93743030 93747982 93743030 ID=MS.gene54372.t1;Parent=MS.gene54372
chr7.4 exon 93743030 93744319 93743030 ID=MS.gene54372.t1.exon1;Parent=MS.gene54372.t1
chr7.4 CDS 93743030 93744319 93743030 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93744514 93744801 93744514 ID=MS.gene54372.t1.exon2;Parent=MS.gene54372.t1
chr7.4 CDS 93744514 93744801 93744514 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93744982 93745110 93744982 ID=MS.gene54372.t1.exon3;Parent=MS.gene54372.t1
chr7.4 CDS 93744982 93745110 93744982 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93745141 93745168 93745141 ID=MS.gene54372.t1.exon4;Parent=MS.gene54372.t1
chr7.4 CDS 93745141 93745168 93745141 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93745267 93745882 93745267 ID=MS.gene54372.t1.exon5;Parent=MS.gene54372.t1
chr7.4 CDS 93745267 93745882 93745267 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93746262 93746406 93746262 ID=MS.gene54372.t1.exon6;Parent=MS.gene54372.t1
chr7.4 CDS 93746262 93746406 93746262 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93746703 93746969 93746703 ID=MS.gene54372.t1.exon7;Parent=MS.gene54372.t1
chr7.4 CDS 93746703 93746969 93746703 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93747094 93747403 93747094 ID=MS.gene54372.t1.exon8;Parent=MS.gene54372.t1
chr7.4 CDS 93747094 93747403 93747094 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
chr7.4 exon 93747864 93747982 93747864 ID=MS.gene54372.t1.exon9;Parent=MS.gene54372.t1
chr7.4 CDS 93747864 93747982 93747864 ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1
Gene Sequence

>MS.gene54372

ATGGCTTCATCTTTGGAGCAGCTTCTTGCACAGGAAGGGTTCAAAGCAAGCGGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCATCATGGTAATTCAAGTGATCCTCTTCACTCTTTGGAAGATAGACTGTGTGTATCATCAAGTGAAAGAATTAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAGATAAGCAATACAAGTGACAATAAAAACATGAGATCAAGTGATAATAATGTTTTTATAGGAAACAAGTTAAATAACGAAGGGTCGAAGAACAGTGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGACGATGCTTATTCAAACCAAGTGTCTAATGTGAAAAGAGGCAAAGAAAAGAAGGAACAATTGGGGGAAAAGCCATTGAAGGATTCATATATGCTTAGACAATTGAGTGGAAATAGAAAGAATATAAAACATCAAGAAAAATCATACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGTTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCCGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAACGGATGAAGATTTTCGGTCGGCGTTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTTGAGGAAGAGCGCAATTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCACAGAAAAAACTGCTGCTGAGGAAACTATATCTGCAACACATCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAGTTTGAATGATCTCAAGTACGATTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCGCGGACGATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATGACAACAAGGAAAGTGAAATTGTTTTAGATACACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAGTTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATCGGAATTCCATCATTATCCATTACGAGTCGACAGGTATTACTAAAATATCTCATTTATTGATAACTTGATCGATAATTGCTAAAATATCTCATTTATTGATAACTTGATCGATAATGAATACAAAGGACCTTGTTTATACAAGAGTCCATAAGAAAATGAAGATAACAAAGATAACTATCTTAACTAACTGTTAACCAACCATTAACTGACTTTATCTCTAATGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCTAGCTCCAACGAACCATTCTCGCCACAGGCAATGGTCAGCAAAAAACTTTATGATTCTTTCTTTGGTAGTAAACCTCAAGTCTATGAAGTTGAAGTTGATGAGGATGAAGATAGCTTTGAAAACTGTGAGAGAGGTTCTTATGGTTCGACCATCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATCGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATGCCTGTGGTAATAATTTCACCTTTTTGTCTTTTTTTTATATAGAAAAAATCTTAAAAAAATAACAATCTTCCTACAGTAAAATTATTTATAGTTTGATGAGTGAGCCACTCATATGCTTGATGTAGCATTAAAATTTGTTTCTGTTCTGTCCTCATATTTCACACTGTCAATAATATTTGACAGCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAAGAATTCCAGAAATGGCACTAGAAAATATTTCTCCATAGAAACTAATTTAAACAGTCACATATCTAATGATCTACCACATGAAAAAGCAAATGAAATTTCTATCAAAAAGATGCAGCCAAATAAGATAACCCCTACTATTGATGGTAAGAAAAATAATATGTTGACTATGTAGCTTCCTTCAGATAACAAATGGATTTTCTGGCAGATAGATAATTCATTTTACATAAAATTTTTGGTGTAGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCAGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCGGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACTGTGGGAAATTCGAAGGAAATTAAGTTAAAAAAGCGCGATGAGGCTATCGTTTTCAAGTTACAAGGTCTATTATCTTCCTTGAAAGAAGAGGAAAAATCAACTTATGCTAAGCATATAATCTCTTTAGGGGTTCTTTCGTTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATCGAGATCTTGTTAAATTGTATCCGATCAGATTCTAGTTGCATATATAAGATAGCAAGGGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCAACAAAAAATGCAATACTATTCCTTACTGAACTTTTGTCAATGAAGAGGTGAGATTTTTATCAAATTTTGGTTTCTTTTTCATATGAGTCACTTTGATTATCATACAGCCAAGTGTACATCACTGATAAAATTTAATTAAAAGATTATTTTGCTCAGTTATTTATCTGCATATTATGTATCAATGTTGTCAAATAGAGGTTATAAATAGCGGTTATAACGGCGCTATAGCGTAGTGGAATTTGAAAAAATCGCTATTGCTATGCAATATGCTATTTAGCATAAAGTGCTGTCAAATAGTGGCTCTATATCACTGTAATATAGCAGAATTAAACAAACCGCTATACTCTGCGATCCGTCATTGATAACACTATTCTGTATATCTACTACTCTTTCGAAATATTATTTACTGGACTATTTATTTTGTAGAAGAAAGGATGTCACTTCTTTCATAAGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGCATCTTAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTATGCTTAATGCATTATCTATGCACATCTTATTTAGTATTTAATGCATTTACATAACTTACTTCTTAGCCTTGCATGATGTTGAGGTTGTTTTTATAAGAGGGTAACATGCAATATTAACCTCTAAATATTGAACAGTCTATATAATATTTAAAGATCAAGTGACTGGCATGTTCCCTTCAATGTTAAAGAGACTTTCAATATTTTTCATGTGATATTTTCTTTAACCAAACAATGAATGAAATTCAATCTCTATCTTTTGTTCAGTTATTGACTAGAACATATTTGCACTGCAGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAATACTACCATCTTAAAGAAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAACGGCTAAATGTAACCATTTCGTCGGTTAGTTTTCTTTTTGTTTTTTGTTTTAATGGAAAATGTTAGTTTGTTAGATTAATATTTACTCTTACATGAGTCACTTAATGAATGTATCTAGGATGATAATCATTTAGTTAAAAAATGACAGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCAAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCTATTTTTGAAGACCATATCTAGATGTTTAGATTCTAGACATGTAGATTTGATGAGGGCTTGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAGTATAATGCTGGATTGCATCTTCCTGCCTTCTTAGCTATCATCTCTCAGCTGAAAGGAATCCTTGAGAATGAAGAACTTGAGCTCAAGACTCTTGCATCTATGTCCTTGTTCAACTTCAGTAAAATATCAGGTTCGGCACCATCACCATTTATTTGTGATAAAAATCTTGCTAATTTCGGAACTATTGAAAGCAATTTTAAATGTTATTCCCTCCGTCTCATTATATGTGTCATTTTAGGTAATGCAAATTTCTTAAGAAAATGATTAGTTGTGTTGATTTTTAGAGTAAACTAATGCGTAAATACTAAAATATTCAAATTCATTGGAGTGGTTGAAAGTAGTGGTAGTAAAGTAGTAGTTAGGTGGACTGTCTAATTAAATAAGGACTTCATCGTAAAAAAGTTAATAAGTGGTATATTGATATTCCAAAGTGAAAAATAGGTTGAGACAATGCAATGATCGGAGTATTAAACAGAAAAAGTGTTGATGTGTATGAAAAGCCGATACTAGTTTATAGATATGAACATGCAATTGCATTAAGAAGACATAATTTATATTCAGTTGTATAATATCTTGCAAATTATTTGTAGAATGCAAAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGAGTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTGTATAGGGAGAATCTGTAG

Protein sequence

>MS.gene54372.t1

MASSLEQLLAQEGFKASGRKVQRSRSSFHHGNSSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNMRSSDNNVFIGNKLNNEGSKNSESEKNKSYNSSDSDSGFDDAYSNQVSNVKRGKEKKEQLGEKPLKDSYMLRQLSGNRKNIKHQEKSYSRSNSNSKNYEDSKNKNSNHVMQLQDASSLAIDEIAVKALVSILNGYIESFLTDEDFRSALRHNCFSSLNFIQLEEERNSETKVITSLEQAIECTEKTAAEETISATHLKRATMQLSIITGLSLNDLKYDFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSSQLSDLKKWYDNKESEIVLDTQNKARKIKILQKVYNESLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVEVDEDEDSFENCERGSYGSTIVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYMPRKGTSRTAAEEWKEKNSRNGTRKYFSIETNLNSHISNDLPHEKPNKITPTIDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTVGNSKEIKLKKRDEAIVFKLQGLLSSLKEEEKSTYAKHIISLGVLSFLCRRFEQGNLEEKSHVIEILLNCIRSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRRKDVTSFISGLVGEDVVSTMHIVLMHLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVNAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTTILKKAGYNNGSSELKSPSLDEEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGESLFLKTISRCLDSRHVDLMRACLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILENEELELKTLASMSLFNFSKISECKTLLKIMADDIAPLLHGVVDVLWTAKKLHAILYRENL