Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54372.t1 | XP_003621006.1 | 91.8 | 1073 | 78 | 1 | 1 | 1063 | 1 | 1073 | 0.00E+00 | 1785.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54372.t1 | C6L7U1 | 21.7 | 1159 | 573 | 30 | 200 | 1037 | 15 | 1160 | 7.8e-40 | 167.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54372.t1 | A2Q2S4 | 91.8 | 1073 | 78 | 1 | 1 | 1063 | 1 | 1073 | 0.0e+00 | 1785.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049259 | MS.gene54372 | 0.833137 | 6.34E-56 | -1.69E-46 |
MS.gene049320 | MS.gene54372 | -0.833742 | 4.48E-56 | -1.69E-46 |
MS.gene049611 | MS.gene54372 | 0.827637 | 1.40E-54 | -1.69E-46 |
MS.gene05010 | MS.gene54372 | -0.81469 | 1.35E-51 | -1.69E-46 |
MS.gene050173 | MS.gene54372 | 0.813882 | 2.04E-51 | -1.69E-46 |
MS.gene050381 | MS.gene54372 | 0.842978 | 1.86E-58 | -1.69E-46 |
MS.gene050504 | MS.gene54372 | -0.837765 | 4.28E-57 | -1.69E-46 |
MS.gene050612 | MS.gene54372 | -0.836174 | 1.09E-56 | -1.69E-46 |
MS.gene050675 | MS.gene54372 | -0.801581 | 8.42E-49 | -1.69E-46 |
MS.gene050699 | MS.gene54372 | -0.80698 | 6.32E-50 | -1.69E-46 |
MS.gene050868 | MS.gene54372 | -0.824602 | 7.39E-54 | -1.69E-46 |
MS.gene050871 | MS.gene54372 | -0.822367 | 2.46E-53 | -1.69E-46 |
MS.gene050883 | MS.gene54372 | 0.860849 | 1.55E-63 | -1.69E-46 |
MS.gene050986 | MS.gene54372 | -0.828214 | 1.02E-54 | -1.69E-46 |
MS.gene051044 | MS.gene54372 | 0.838673 | 2.50E-57 | -1.69E-46 |
MS.gene051127 | MS.gene54372 | 0.858405 | 8.43E-63 | -1.69E-46 |
MS.gene051138 | MS.gene54372 | 0.845305 | 4.41E-59 | -1.69E-46 |
MS.gene051946 | MS.gene54372 | 0.818582 | 1.82E-52 | -1.69E-46 |
MS.gene053069 | MS.gene54372 | 0.829215 | 5.83E-55 | -1.69E-46 |
MS.gene053420 | MS.gene54372 | 0.850644 | 1.49E-60 | -1.69E-46 |
MS.gene053488 | MS.gene54372 | 0.837926 | 3.90E-57 | -1.69E-46 |
MS.gene053549 | MS.gene54372 | 0.808572 | 2.90E-50 | -1.69E-46 |
MS.gene053561 | MS.gene54372 | 0.848653 | 5.35E-60 | -1.69E-46 |
MS.gene053887 | MS.gene54372 | 0.820942 | 5.25E-53 | -1.69E-46 |
MS.gene054056 | MS.gene54372 | 0.832885 | 7.32E-56 | -1.69E-46 |
MS.gene054708 | MS.gene54372 | 0.854256 | 1.39E-61 | -1.69E-46 |
MS.gene054954 | MS.gene54372 | -0.813562 | 2.40E-51 | -1.69E-46 |
MS.gene055124 | MS.gene54372 | 0.829128 | 6.12E-55 | -1.69E-46 |
MS.gene055139 | MS.gene54372 | 0.809249 | 2.08E-50 | -1.69E-46 |
MS.gene055154 | MS.gene54372 | 0.860176 | 2.48E-63 | -1.69E-46 |
MS.gene055202 | MS.gene54372 | 0.81041 | 1.17E-50 | -1.69E-46 |
MS.gene055362 | MS.gene54372 | -0.824566 | 7.53E-54 | -1.69E-46 |
MS.gene055502 | MS.gene54372 | -0.808632 | 2.81E-50 | -1.69E-46 |
MS.gene055942 | MS.gene54372 | 0.835397 | 1.72E-56 | -1.69E-46 |
MS.gene056224 | MS.gene54372 | 0.829372 | 5.34E-55 | -1.69E-46 |
MS.gene056311 | MS.gene54372 | 0.821368 | 4.19E-53 | -1.69E-46 |
MS.gene056504 | MS.gene54372 | -0.836176 | 1.09E-56 | -1.69E-46 |
MS.gene056657 | MS.gene54372 | -0.812181 | 4.82E-51 | -1.69E-46 |
MS.gene057014 | MS.gene54372 | 0.854634 | 1.08E-61 | -1.69E-46 |
MS.gene058093 | MS.gene54372 | 0.809277 | 2.05E-50 | -1.69E-46 |
MS.gene058099 | MS.gene54372 | 0.842869 | 1.99E-58 | -1.69E-46 |
MS.gene058108 | MS.gene54372 | 0.812767 | 3.59E-51 | -1.69E-46 |
MS.gene058109 | MS.gene54372 | 0.874045 | 9.17E-68 | -1.69E-46 |
MS.gene058111 | MS.gene54372 | 0.828555 | 8.43E-55 | -1.69E-46 |
MS.gene058117 | MS.gene54372 | 0.836829 | 7.44E-57 | -1.69E-46 |
MS.gene058171 | MS.gene54372 | 0.830485 | 2.86E-55 | -1.69E-46 |
MS.gene058173 | MS.gene54372 | 0.822106 | 2.83E-53 | -1.69E-46 |
MS.gene058175 | MS.gene54372 | 0.837298 | 5.65E-57 | -1.69E-46 |
MS.gene058268 | MS.gene54372 | 0.822221 | 2.66E-53 | -1.69E-46 |
MS.gene058269 | MS.gene54372 | 0.81889 | 1.55E-52 | -1.69E-46 |
MS.gene058493 | MS.gene54372 | 0.837909 | 3.93E-57 | -1.69E-46 |
MS.gene058494 | MS.gene54372 | 0.822497 | 2.29E-53 | -1.69E-46 |
MS.gene058496 | MS.gene54372 | 0.810824 | 9.51E-51 | -1.69E-46 |
MS.gene058603 | MS.gene54372 | 0.803725 | 3.04E-49 | -1.69E-46 |
MS.gene058628 | MS.gene54372 | 0.818268 | 2.14E-52 | -1.69E-46 |
MS.gene058629 | MS.gene54372 | 0.815465 | 9.12E-52 | -1.69E-46 |
MS.gene058630 | MS.gene54372 | 0.814191 | 1.75E-51 | -1.69E-46 |
MS.gene059022 | MS.gene54372 | -0.839386 | 1.63E-57 | -1.69E-46 |
MS.gene059045 | MS.gene54372 | 0.81051 | 1.11E-50 | -1.69E-46 |
MS.gene059223 | MS.gene54372 | 0.826882 | 2.13E-54 | -1.69E-46 |
MS.gene059677 | MS.gene54372 | -0.814104 | 1.83E-51 | -1.69E-46 |
MS.gene059690 | MS.gene54372 | 0.824517 | 7.73E-54 | -1.69E-46 |
MS.gene059691 | MS.gene54372 | 0.805415 | 1.35E-49 | -1.69E-46 |
MS.gene059694 | MS.gene54372 | 0.822649 | 2.12E-53 | -1.69E-46 |
MS.gene059697 | MS.gene54372 | 0.817246 | 3.64E-52 | -1.69E-46 |
MS.gene059865 | MS.gene54372 | -0.841578 | 4.37E-58 | -1.69E-46 |
MS.gene059916 | MS.gene54372 | 0.811117 | 8.22E-51 | -1.69E-46 |
MS.gene060595 | MS.gene54372 | 0.80171 | 7.92E-49 | -1.69E-46 |
MS.gene06077 | MS.gene54372 | -0.823952 | 1.05E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54372.t1 | MTR_7g005940 | 94.222 | 1073 | 52 | 1 | 1 | 1063 | 1 | 1073 | 0.0 | 2040 |
MS.gene54372.t1 | MTR_7g005940 | 94.203 | 1035 | 50 | 1 | 1 | 1025 | 1 | 1035 | 0.0 | 1960 |
MS.gene54372.t1 | MTR_4g083620 | 41.778 | 225 | 121 | 6 | 195 | 410 | 98 | 321 | 7.21e-43 | 160 |
MS.gene54372.t1 | MTR_2g028940 | 30.130 | 385 | 261 | 4 | 682 | 1063 | 566 | 945 | 4.00e-37 | 152 |
MS.gene54372.t1 | MTR_2g028940 | 35.448 | 268 | 137 | 9 | 165 | 422 | 41 | 282 | 3.21e-32 | 136 |
MS.gene54372.t1 | MTR_2g028940 | 30.925 | 346 | 231 | 4 | 682 | 1024 | 566 | 906 | 2.05e-33 | 139 |
MS.gene54372.t1 | MTR_2g028940 | 35.448 | 268 | 137 | 9 | 165 | 422 | 41 | 282 | 2.43e-32 | 136 |
MS.gene54372.t1 | MTR_2g028940 | 35.448 | 268 | 137 | 9 | 165 | 422 | 41 | 282 | 1.32e-32 | 136 |
MS.gene54372.t1 | MTR_2g028940 | 32.468 | 154 | 102 | 2 | 682 | 833 | 566 | 719 | 2.84e-13 | 74.7 |
MS.gene54372.t1 | MTR_1g090320 | 28.095 | 420 | 269 | 13 | 627 | 1041 | 776 | 1167 | 1.51e-25 | 115 |
MS.gene54372.t1 | MTR_1g090320 | 36.667 | 120 | 76 | 0 | 586 | 705 | 514 | 633 | 8.89e-21 | 99.8 |
MS.gene54372.t1 | MTR_1g090320 | 26.141 | 241 | 137 | 5 | 200 | 405 | 15 | 249 | 4.74e-14 | 77.8 |
MS.gene54372.t1 | MTR_1g090320 | 28.095 | 420 | 269 | 13 | 627 | 1041 | 778 | 1169 | 1.51e-25 | 115 |
MS.gene54372.t1 | MTR_1g090320 | 36.667 | 120 | 76 | 0 | 586 | 705 | 516 | 635 | 8.45e-21 | 99.8 |
MS.gene54372.t1 | MTR_1g090320 | 26.141 | 241 | 137 | 5 | 200 | 405 | 17 | 251 | 4.58e-14 | 77.8 |
MS.gene54372.t1 | MTR_8g103227 | 46.739 | 92 | 47 | 1 | 562 | 653 | 374 | 463 | 1.72e-20 | 98.6 |
MS.gene54372.t1 | MTR_8g103227 | 25.648 | 347 | 248 | 7 | 682 | 1025 | 658 | 997 | 2.62e-16 | 85.1 |
MS.gene54372.t1 | MTR_7g059405 | 38.136 | 118 | 66 | 4 | 536 | 652 | 219 | 330 | 2.07e-15 | 81.3 |
MS.gene54372.t1 | MTR_7g117890 | 30.675 | 163 | 104 | 3 | 587 | 749 | 257 | 410 | 2.69e-15 | 81.6 |
MS.gene54372.t1 | MTR_7g078330 | 41.573 | 89 | 48 | 2 | 564 | 652 | 256 | 340 | 2.40e-13 | 74.7 |
MS.gene54372.t1 | MTR_5g034440 | 29.371 | 143 | 75 | 4 | 588 | 729 | 283 | 400 | 3.06e-13 | 74.3 |
MS.gene54372.t1 | MTR_4g063800 | 39.437 | 71 | 42 | 1 | 582 | 652 | 252 | 321 | 3.24e-12 | 71.2 |
MS.gene54372.t1 | MTR_3g096370 | 44.286 | 70 | 36 | 2 | 584 | 652 | 9 | 76 | 4.32e-12 | 69.7 |
MS.gene54372.t1 | MTR_2g436530 | 22.016 | 377 | 276 | 7 | 682 | 1057 | 484 | 843 | 4.88e-12 | 70.9 |
MS.gene54372.t1 | MTR_4g107010 | 26.768 | 198 | 113 | 6 | 586 | 779 | 281 | 450 | 1.59e-11 | 68.9 |
MS.gene54372.t1 | MTR_7g053260 | 40.580 | 69 | 40 | 1 | 584 | 652 | 77 | 144 | 1.59e-11 | 68.6 |
MS.gene54372.t1 | MTR_4g085720 | 43.478 | 69 | 36 | 2 | 585 | 652 | 14 | 80 | 2.28e-11 | 67.8 |
MS.gene54372.t1 | MTR_5g077510 | 41.429 | 70 | 38 | 2 | 584 | 652 | 34 | 101 | 2.28e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54372.t1 | AT1G76390 | 38.095 | 105 | 52 | 4 | 575 | 672 | 20 | 118 | 2.07e-12 | 72.0 |
MS.gene54372.t1 | AT1G76390 | 38.095 | 105 | 52 | 4 | 575 | 672 | 20 | 118 | 2.07e-12 | 72.0 |
MS.gene54372.t1 | AT5G42340 | 40.000 | 80 | 47 | 1 | 573 | 652 | 278 | 356 | 8.06e-12 | 70.1 |
MS.gene54372.t1 | AT1G68940 | 27.542 | 236 | 128 | 9 | 587 | 793 | 301 | 522 | 1.12e-11 | 69.7 |
MS.gene54372.t1 | AT1G68940 | 27.542 | 236 | 128 | 9 | 587 | 793 | 248 | 469 | 1.14e-11 | 69.7 |
MS.gene54372.t1 | AT1G68940 | 27.542 | 236 | 128 | 9 | 587 | 793 | 301 | 522 | 1.19e-11 | 69.7 |
MS.gene54372.t1 | AT1G49780 | 43.478 | 69 | 36 | 2 | 585 | 652 | 14 | 80 | 2.79e-11 | 67.4 |
MS.gene54372.t1 | AT3G07360 | 40.580 | 69 | 40 | 1 | 584 | 652 | 73 | 140 | 3.39e-11 | 67.4 |
MS.gene54372.t1 | AT1G20780 | 37.895 | 95 | 51 | 3 | 585 | 672 | 23 | 116 | 4.63e-11 | 67.8 |
MS.gene54372.t1 | AT1G20780 | 37.895 | 95 | 51 | 3 | 585 | 672 | 23 | 116 | 4.63e-11 | 67.8 |
MS.gene54372.t1 | AT1G20780 | 37.895 | 95 | 51 | 3 | 585 | 672 | 23 | 116 | 4.63e-11 | 67.8 |
MS.gene54372.t1 | AT1G23030 | 38.889 | 72 | 43 | 1 | 584 | 655 | 240 | 310 | 9.88e-11 | 66.2 |
Find 150 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTTCATTATACACTTTC+TGG | 0.079952 | 7.4:-93744181 | None:intergenic |
ATAGTAGGGGTTATCTTATT+TGG | 0.182015 | 7.4:-93745141 | None:intergenic |
CGATCAAACGCTTCAAAATA+AGG | 0.183245 | 7.4:-93745457 | None:intergenic |
GCTAAGCATATAATCTCTTT+AGG | 0.228808 | 7.4:+93745638 | MS.gene54372:CDS |
AAACTTTATGATTCTTTCTT+TGG | 0.229672 | 7.4:+93744589 | MS.gene54372:CDS |
ATGGAGTAGTTGATGTATTA+TGG | 0.230031 | 7.4:+93747915 | MS.gene54372:CDS |
AGTATAAATGGCTTCATCTT+TGG | 0.231855 | 7.4:+93743023 | None:intergenic |
ACTGTTTAAATTAGTTTCTA+TGG | 0.282515 | 7.4:-93745058 | None:intergenic |
CTAAGCATATAATCTCTTTA+GGG | 0.289542 | 7.4:+93745639 | MS.gene54372:CDS |
AAGTGATCCTCTTCACTCTT+TGG | 0.296475 | 7.4:+93743128 | MS.gene54372:CDS |
TTCAACTTCAGTAAAATATC+AGG | 0.299538 | 7.4:+93747382 | MS.gene54372:CDS |
TTGCTTTATATTACAAAGAT+TGG | 0.314400 | 7.4:+93744225 | MS.gene54372:CDS |
TATAATGAAAGTTTGGATTC+AGG | 0.314769 | 7.4:+93744191 | MS.gene54372:CDS |
GAGGTTTGAACAAGGAAATT+TGG | 0.318367 | 7.4:+93745682 | MS.gene54372:CDS |
ATGCAGCTTAGCATTATTAC+TGG | 0.324069 | 7.4:+93743858 | MS.gene54372:CDS |
AAAGGTTTGACCTGACTCTA+AGG | 0.329503 | 7.4:-93745339 | None:intergenic |
GAAAGTGTATAATGAAAGTT+TGG | 0.337823 | 7.4:+93744184 | MS.gene54372:CDS |
GATATTGCTCCCCTTCTTCA+TGG | 0.340657 | 7.4:+93747896 | MS.gene54372:CDS |
GATATTGTTGCCTGAACTTT+GGG | 0.343487 | 7.4:+93744052 | MS.gene54372:CDS |
AACTGTGAGAGAGGTTCTTA+TGG | 0.343570 | 7.4:+93744667 | MS.gene54372:CDS |
TTCAAAATAAGGTTGCTAAA+TGG | 0.346748 | 7.4:-93745446 | None:intergenic |
CAGATTCTCCCTATACAAAA+TGG | 0.348155 | 7.4:-93747957 | None:intergenic |
GGAAGATGAAGAAGAAGAAA+TGG | 0.363565 | 7.4:+93747093 | MS.gene54372:intron |
AAGAAAGCAGGTTATAATAA+TGG | 0.369011 | 7.4:+93746880 | MS.gene54372:CDS |
TCTAAAGTATTTCCTGTTAC+CGG | 0.369352 | 7.4:-93745410 | None:intergenic |
AACTTTCTGATTTGAAGAAA+TGG | 0.370655 | 7.4:+93744093 | MS.gene54372:CDS |
CAAAGAAAAGAAGGAACAAT+TGG | 0.374214 | 7.4:+93743413 | MS.gene54372:CDS |
TGACCTGACTCTAAGGTAAC+TGG | 0.378146 | 7.4:-93745332 | None:intergenic |
CGATATTGTTGCCTGAACTT+TGG | 0.378191 | 7.4:+93744051 | MS.gene54372:CDS |
CTTATTACACTTTGAACTAC+TGG | 0.379975 | 7.4:+93746385 | MS.gene54372:CDS |
AAGATAACCCCTACTATTGA+TGG | 0.384414 | 7.4:+93745147 | MS.gene54372:CDS |
CACTTCTTTCATAAGTGGCT+TGG | 0.399869 | 7.4:+93746274 | MS.gene54372:CDS |
AACAGAACATGTCCGGTAAC+AGG | 0.401864 | 7.4:+93745398 | MS.gene54372:CDS |
GGGTTCTTTCGTTTCTCTGT+AGG | 0.417240 | 7.4:+93745660 | MS.gene54372:CDS |
ATAACCTGCTTTCTTTAAGA+TGG | 0.427114 | 7.4:-93746872 | None:intergenic |
AATTCATCAGATAGTGATAG+TGG | 0.427587 | 7.4:+93743345 | MS.gene54372:CDS |
AGAAATGGATGAAGAGTTCA+TGG | 0.427897 | 7.4:+93747108 | MS.gene54372:CDS |
AATTCATGAACTGGTACTCT+TGG | 0.428025 | 7.4:-93744769 | None:intergenic |
CATCAAGGCATGGTTTCAAA+AGG | 0.431872 | 7.4:+93745373 | MS.gene54372:CDS |
TCTTGAGCTTCTTCACAGTA+AGG | 0.432710 | 7.4:+93745802 | MS.gene54372:CDS |
AAGAAAACTAACCGACGAAA+TGG | 0.434545 | 7.4:-93746959 | None:intergenic |
AAAGAAAAGAAGGAACAATT+GGG | 0.435116 | 7.4:+93743414 | MS.gene54372:CDS |
TTCTTTCATAAGTGGCTTGG+TGG | 0.436399 | 7.4:+93746277 | MS.gene54372:CDS |
TGAAGCGTTTGATCGATAAC+TGG | 0.436744 | 7.4:+93745465 | MS.gene54372:CDS |
AATATCGTCCGCGCCTGAAA+AGG | 0.442304 | 7.4:-93744035 | None:intergenic |
GATGTCACTTCTTTCATAAG+TGG | 0.443620 | 7.4:+93746269 | MS.gene54372:CDS |
ATAAATTCCTGTGGTATGCT+TGG | 0.444770 | 7.4:-93745278 | None:intergenic |
TCTGACAAGAAATATCTTTG+AGG | 0.446797 | 7.4:+93745307 | MS.gene54372:CDS |
AATAGACGCTCCCAAAGTTC+AGG | 0.451875 | 7.4:-93744062 | None:intergenic |
AACCTTGTCATCATTTAAGC+TGG | 0.455375 | 7.4:-93746773 | None:intergenic |
CAAGGACAGCTGCAGAAGAA+TGG | 0.461431 | 7.4:+93744995 | MS.gene54372:CDS |
CTTTCTAAACAGTATAATGC+TGG | 0.465237 | 7.4:+93747262 | MS.gene54372:CDS |
AATGGAAACTAGTGCTTTCA+CGG | 0.469991 | 7.4:-93743625 | None:intergenic |
TTCTATGTATCCATTCAGAA+TGG | 0.471459 | 7.4:-93743643 | None:intergenic |
GCACTAGTTTCCATTCTGAA+TGG | 0.474787 | 7.4:+93743633 | MS.gene54372:CDS |
AACTTGTTAGAATCAATGAT+TGG | 0.475567 | 7.4:+93747133 | MS.gene54372:CDS |
AAAGAGAAGAATTCCAGAAA+TGG | 0.476144 | 7.4:+93745018 | MS.gene54372:CDS |
TAATACCTGTCGACTCGTAA+TGG | 0.478741 | 7.4:-93744303 | None:intergenic |
CAAGTGTCTAATGTGAAAAG+AGG | 0.484843 | 7.4:+93743390 | MS.gene54372:CDS |
GCCGTTGATCCTCTTCATCA+AGG | 0.486422 | 7.4:-93746927 | None:intergenic |
ATCTCCTAGCCTTGATGAAG+AGG | 0.488093 | 7.4:+93746918 | MS.gene54372:CDS |
CTGAGAGATGATAGCTAAGA+AGG | 0.488827 | 7.4:-93747299 | None:intergenic |
GGCATATAGAATTCATGAAC+TGG | 0.491434 | 7.4:-93744778 | None:intergenic |
CATCAACTACTCCATGAAGA+AGG | 0.492239 | 7.4:-93747907 | None:intergenic |
TTTGAATTTCATTCAACTTG+AGG | 0.494489 | 7.4:+93743722 | MS.gene54372:CDS |
ACCATTGCCTGTGGCGAGAA+TGG | 0.494969 | 7.4:-93744559 | None:intergenic |
GCTCAAGTTCTTCATTCTCA+AGG | 0.497709 | 7.4:-93747333 | None:intergenic |
AGCATATATGAATCCTTCAA+TGG | 0.500188 | 7.4:-93743444 | None:intergenic |
TCAAGATCTTCTTTCCATCA+TGG | 0.500865 | 7.4:+93743099 | MS.gene54372:CDS |
CTTGTCTAATAACTGTTACA+TGG | 0.501990 | 7.4:+93747227 | MS.gene54372:CDS |
ATTCCGATGGAAGGAATAGT+TGG | 0.504559 | 7.4:-93744269 | None:intergenic |
GTAGTTCAAAGTGTAATAAG+AGG | 0.504871 | 7.4:-93746382 | None:intergenic |
AGAATCTAAACATCTAGATA+TGG | 0.504905 | 7.4:-93747182 | None:intergenic |
TCTTTCATAAGTGGCTTGGT+GGG | 0.512051 | 7.4:+93746278 | MS.gene54372:CDS |
CGAATTTCCCACAGTTTGAG+AGG | 0.512056 | 7.4:-93745522 | None:intergenic |
CTTTGAAAGAAAAGCCATCA+AGG | 0.514152 | 7.4:+93745358 | MS.gene54372:CDS |
TTTGGAGCAGCTTCTTGCAC+AGG | 0.514480 | 7.4:+93743041 | MS.gene54372:CDS |
TTCTTTCGTTTCTCTGTAGG+AGG | 0.515913 | 7.4:+93745663 | MS.gene54372:CDS |
ATTATCTTCCTTGAAAGAAG+AGG | 0.516340 | 7.4:+93745601 | MS.gene54372:CDS |
GAAAAGAGGCAAAGAAAAGA+AGG | 0.518665 | 7.4:+93743404 | MS.gene54372:CDS |
GAACCAGTTACCTTAGAGTC+AGG | 0.520909 | 7.4:+93745329 | MS.gene54372:CDS |
ATTGCTTATCTGATATCTTG+AGG | 0.529217 | 7.4:-93743214 | None:intergenic |
TCAAAGATATTTCTTGTCAG+AGG | 0.534699 | 7.4:-93745305 | None:intergenic |
TCATTGACAAAAGTTCAGTA+AGG | 0.539896 | 7.4:-93745856 | None:intergenic |
TAATGACAGGGAAGTTCACT+TGG | 0.540383 | 7.4:+93744505 | MS.gene54372:intron |
AGCAGCTTCTTGCACAGGAA+GGG | 0.540666 | 7.4:+93743046 | MS.gene54372:CDS |
AAAGGGAAACAGAACATGTC+CGG | 0.542373 | 7.4:+93745391 | MS.gene54372:CDS |
ACCATTCTCGCCACAGGCAA+TGG | 0.544070 | 7.4:+93744558 | MS.gene54372:CDS |
CTCTGTAGGAGGTTTGAACA+AGG | 0.545055 | 7.4:+93745674 | MS.gene54372:CDS |
GAGATGATAGCTAAGAAGGC+AGG | 0.545629 | 7.4:-93747295 | None:intergenic |
CGACTCGTAATGGATAATGA+TGG | 0.548637 | 7.4:-93744293 | None:intergenic |
ACTACCATCTTAAAGAAAGC+AGG | 0.549148 | 7.4:+93746868 | MS.gene54372:CDS |
GGCATCAAGTGCCTCTGCAA+TGG | 0.549842 | 7.4:-93746752 | None:intergenic |
TAATAAGAGGACAGCGATGA+GGG | 0.550715 | 7.4:-93746369 | None:intergenic |
CTCAAGACTTGTAATCACCT+TGG | 0.550915 | 7.4:-93743763 | None:intergenic |
ATCAACTACTCCATGAAGAA+GGG | 0.554248 | 7.4:-93747906 | None:intergenic |
CTAGACATGTAGATTTGATG+AGG | 0.555129 | 7.4:+93747203 | MS.gene54372:CDS |
GTTGCATATATAAGATAGCA+AGG | 0.557196 | 7.4:+93745759 | MS.gene54372:CDS |
GCCTTGATGAAGAGGATCAA+CGG | 0.558378 | 7.4:+93746926 | MS.gene54372:CDS |
ATCAAGGCATGGTTTCAAAA+GGG | 0.559344 | 7.4:+93745374 | MS.gene54372:CDS |
TTAGAATCAATGATTGGTGA+TGG | 0.561943 | 7.4:+93747139 | MS.gene54372:CDS |
ATTATCCATTACGAGTCGAC+AGG | 0.568253 | 7.4:+93744298 | MS.gene54372:CDS |
TCAAACTGTGGGAAATTCGA+AGG | 0.569601 | 7.4:+93745526 | MS.gene54372:CDS |
AAAGAAAAGCCATCAAGGCA+TGG | 0.569716 | 7.4:+93745363 | MS.gene54372:CDS |
ATTATACTGTTTAGAAAGTG+AGG | 0.571728 | 7.4:-93747257 | None:intergenic |
ACTTCAACTTCATAGACTTG+AGG | 0.573701 | 7.4:-93744619 | None:intergenic |
TAGACATGTAGATTTGATGA+GGG | 0.575230 | 7.4:+93747204 | MS.gene54372:CDS |
ATTATTTGTTATCATTCCAG+TGG | 0.576441 | 7.4:-93746845 | None:intergenic |
TTGCATATATAAGATAGCAA+GGG | 0.577003 | 7.4:+93745760 | MS.gene54372:CDS |
TGATCCTCTTCATCAAGGCT+AGG | 0.580353 | 7.4:-93746922 | None:intergenic |
AATAATATTTGACAGCGGAA+AGG | 0.581020 | 7.4:+93744967 | MS.gene54372:intron |
CAACGAACCATTCTCGCCAC+AGG | 0.582453 | 7.4:+93744552 | MS.gene54372:CDS |
AATGATGGAATTCCGATGGA+AGG | 0.584929 | 7.4:-93744278 | None:intergenic |
AGCTTTGAAAACTGTGAGAG+AGG | 0.585518 | 7.4:+93744658 | MS.gene54372:CDS |
TACAAAGATTGGCTCAGTGA+AGG | 0.585870 | 7.4:+93744236 | MS.gene54372:CDS |
GAGCAGCTTCTTGCACAGGA+AGG | 0.586816 | 7.4:+93743045 | MS.gene54372:CDS |
GCTATCATCTCTCAGCTGAA+AGG | 0.587912 | 7.4:+93747307 | MS.gene54372:CDS |
GGATAATGATGGAATTCCGA+TGG | 0.588555 | 7.4:-93744282 | None:intergenic |
CTATCTTCCAAAGAGTGAAG+AGG | 0.591307 | 7.4:-93743135 | None:intergenic |
GGAAACAAGTTAAATAACGA+AGG | 0.597175 | 7.4:+93743285 | MS.gene54372:CDS |
GATCACTTGAATTACCATGA+TGG | 0.601325 | 7.4:-93743113 | None:intergenic |
ATATGCAACTAGAATCTGAT+CGG | 0.602029 | 7.4:-93745745 | None:intergenic |
ATATTCTCCAAGCATACCAC+AGG | 0.604413 | 7.4:+93745271 | MS.gene54372:CDS |
TATATGCTTAGACAATTGAG+TGG | 0.608616 | 7.4:+93743459 | MS.gene54372:CDS |
CAGGAAGGGTTCAAAGCAAG+CGG | 0.609110 | 7.4:+93743060 | MS.gene54372:CDS |
TTTCTTACCATCAATAGTAG+GGG | 0.612144 | 7.4:-93745154 | None:intergenic |
TGCCAGCTTAAATGATGACA+AGG | 0.619717 | 7.4:+93746771 | MS.gene54372:CDS |
GTTTAGCATATACATAGAGA+TGG | 0.619765 | 7.4:+93746720 | MS.gene54372:CDS |
GAAACAAGTTAAATAACGAA+GGG | 0.623558 | 7.4:+93743286 | MS.gene54372:CDS |
ACTCCAACTATTCCTTCCAT+CGG | 0.626415 | 7.4:+93744266 | MS.gene54372:CDS |
AGAGCGCAATTCTGAGACCA+AGG | 0.627342 | 7.4:+93743746 | MS.gene54372:CDS |
TGCATATATAAGATAGCAAG+GGG | 0.634241 | 7.4:+93745761 | MS.gene54372:CDS |
TCAACTACTCCATGAAGAAG+GGG | 0.634314 | 7.4:-93747905 | None:intergenic |
TTTGAGAGGCAAAATCAAGA+AGG | 0.635942 | 7.4:-93745508 | None:intergenic |
TAAGCATATAATCTCTTTAG+GGG | 0.637602 | 7.4:+93745640 | MS.gene54372:CDS |
GCTAAATGTAACCATTTCGT+CGG | 0.644677 | 7.4:+93746948 | MS.gene54372:CDS |
CTGTGGCGAGAATGGTTCGT+TGG | 0.657069 | 7.4:-93744551 | None:intergenic |
GAAGAAATGGTATGACAACA+AGG | 0.658330 | 7.4:+93744106 | MS.gene54372:CDS |
GACAGCGGAAAGGAACATCA+AGG | 0.658940 | 7.4:+93744977 | MS.gene54372:intron |
AAGTTGAATGAAATTCAAAG+AGG | 0.660155 | 7.4:-93743718 | None:intergenic |
CAAGCGGCAGAAAAGTGCAA+AGG | 0.663772 | 7.4:+93743076 | MS.gene54372:CDS |
GTAATAAGAGGACAGCGATG+AGG | 0.664032 | 7.4:-93746370 | None:intergenic |
TCAAAGAGGAGAAACAATTG+TGG | 0.665172 | 7.4:-93743704 | None:intergenic |
GGCTGTGAATGCCATTGCAG+AGG | 0.666777 | 7.4:+93746741 | MS.gene54372:CDS |
CTATGAAGTTGAAGTTGATG+AGG | 0.667707 | 7.4:+93744627 | MS.gene54372:CDS |
AAGAAAAGAAGGAACAATTG+GGG | 0.676981 | 7.4:+93743415 | MS.gene54372:CDS |
AGAAAAGAAGGAACAATTGG+GGG | 0.678559 | 7.4:+93743416 | MS.gene54372:CDS |
AGAGGACAAATAAATTCCTG+TGG | 0.684769 | 7.4:-93745287 | None:intergenic |
AATAAGAGGACAGCGATGAG+GGG | 0.685162 | 7.4:-93746368 | None:intergenic |
GGATCAAATATACAACACTG+AGG | 0.761941 | 7.4:-93743959 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATAAAAAAAAGACAAAA+AGG | - | chr7.4:93744820-93744839 | None:intergenic | 10.0% |
!!! | TTCATTTTACATAAAATTTT+TGG | + | chr7.4:93745239-93745258 | MS.gene54372:intron | 10.0% |
!! | ACTAAAATATTCAAATTCAT+TGG | + | chr7.4:93747577-93747596 | MS.gene54372:intron | 15.0% |
!!! | ACTATAAATAATTTTACTGT+AGG | - | chr7.4:93744871-93744890 | None:intergenic | 15.0% |
!!! | AGATTTTTATCACAAATAAA+TGG | - | chr7.4:93747421-93747440 | None:intergenic | 15.0% |
!!! | AGTGATAATAATGTTTTTAT+AGG | + | chr7.4:93743264-93743283 | MS.gene54372:CDS | 15.0% |
!!! | CTTTTTGTTTTTTGTTTTAA+TGG | + | chr7.4:93746979-93746998 | MS.gene54372:intron | 15.0% |
!!! | TATTAATGTTTTTTTAACGA+TGG | - | chr7.4:93744698-93744717 | None:intergenic | 15.0% |
!! | AAACTTTATGATTCTTTCTT+TGG | + | chr7.4:93744589-93744608 | MS.gene54372:CDS | 20.0% |
!! | ATCGTAAAAAAGTTAATAAG+TGG | + | chr7.4:93747664-93747683 | MS.gene54372:intron | 20.0% |
!! | ATTGAATTTCATTCATTGTT+TGG | - | chr7.4:93746637-93746656 | None:intergenic | 20.0% |
!! | GATAAAAATCTTGCTAATTT+CGG | + | chr7.4:93747430-93747449 | MS.gene54372:intron | 20.0% |
!! | TCATATCTATAAACTAGTAT+CGG | - | chr7.4:93747777-93747796 | None:intergenic | 20.0% |
!! | TCATTTAGTTAAAAAATGAC+AGG | + | chr7.4:93747072-93747091 | MS.gene54372:intron | 20.0% |
!! | TCTTTCGAAATATTATTTAC+TGG | + | chr7.4:93746223-93746242 | MS.gene54372:intron | 20.0% |
!! | TTGCTTTATATTACAAAGAT+TGG | + | chr7.4:93744225-93744244 | MS.gene54372:CDS | 20.0% |
!!! | AATAGTATTGCATTTTTTGT+TGG | - | chr7.4:93745836-93745855 | None:intergenic | 20.0% |
!!! | ACTGTTTAAATTAGTTTCTA+TGG | - | chr7.4:93745061-93745080 | None:intergenic | 20.0% |
!!! | ATACATAGAAAGTTTTCTAA+CGG | + | chr7.4:93743656-93743675 | MS.gene54372:CDS | 20.0% |
!!! | ATAGTATTGCATTTTTTGTT+GGG | - | chr7.4:93745835-93745854 | None:intergenic | 20.0% |
!!! | CTATTTATTTTGTAGAAGAA+AGG | + | chr7.4:93746247-93746266 | MS.gene54372:intron | 20.0% |
!!! | GTGAGATTTTTATCAAATTT+TGG | + | chr7.4:93745883-93745902 | MS.gene54372:intron | 20.0% |
!!! | TTACATAAAATTTTTGGTGT+AGG | + | chr7.4:93745245-93745264 | MS.gene54372:intron | 20.0% |
!!! | TTGTTATCTTCATTTTCTTA+TGG | - | chr7.4:93744435-93744454 | None:intergenic | 20.0% |
! | AAAGAAAAGAAGGAACAATT+GGG | + | chr7.4:93743414-93743433 | MS.gene54372:CDS | 25.0% |
! | AAAGTCTCTTTAACATTGAA+GGG | - | chr7.4:93746585-93746604 | None:intergenic | 25.0% |
! | AAATGACACATATAATGAGA+CGG | - | chr7.4:93747489-93747508 | None:intergenic | 25.0% |
! | AACTTTCATTATACACTTTC+TGG | - | chr7.4:93744184-93744203 | None:intergenic | 25.0% |
! | AAGAAAGCAGGTTATAATAA+TGG | + | chr7.4:93746880-93746899 | MS.gene54372:CDS | 25.0% |
! | AAGTTGAATGAAATTCAAAG+AGG | - | chr7.4:93743721-93743740 | None:intergenic | 25.0% |
! | AATATTCAAATTCATTGGAG+TGG | + | chr7.4:93747582-93747601 | MS.gene54372:intron | 25.0% |
! | AGAATCTAAACATCTAGATA+TGG | - | chr7.4:93747185-93747204 | None:intergenic | 25.0% |
! | ATAGACTGTTCAATATTTAG+AGG | - | chr7.4:93746530-93746549 | None:intergenic | 25.0% |
! | ATATTTAAAGATCAAGTGAC+TGG | + | chr7.4:93746553-93746572 | MS.gene54372:intron | 25.0% |
! | ATTATACTGTTTAGAAAGTG+AGG | - | chr7.4:93747260-93747279 | None:intergenic | 25.0% |
! | CAAATAGAGGTTATAAATAG+CGG | + | chr7.4:93746024-93746043 | MS.gene54372:intron | 25.0% |
! | CCAAAGAAAAAAGAAAGTTT+CGG | + | chr7.4:93743980-93743999 | MS.gene54372:CDS | 25.0% |
! | CTAAGCATATAATCTCTTTA+GGG | + | chr7.4:93745639-93745658 | MS.gene54372:CDS | 25.0% |
! | GAAACAAGTTAAATAACGAA+GGG | + | chr7.4:93743286-93743305 | MS.gene54372:CDS | 25.0% |
! | GATATTCCAAAGTGAAAAAT+AGG | + | chr7.4:93747693-93747712 | MS.gene54372:intron | 25.0% |
! | GTTATAAATAGCGGTTATAA+CGG | + | chr7.4:93746033-93746052 | MS.gene54372:intron | 25.0% |
! | TAAGCATATAATCTCTTTAG+GGG | + | chr7.4:93745640-93745659 | MS.gene54372:CDS | 25.0% |
! | TATAATGAAAGTTTGGATTC+AGG | + | chr7.4:93744191-93744210 | MS.gene54372:CDS | 25.0% |
! | TTAGAGATAAAGTCAGTTAA+TGG | - | chr7.4:93744488-93744507 | None:intergenic | 25.0% |
! | TTATCACAAATAAATGGTGA+TGG | - | chr7.4:93747415-93747434 | None:intergenic | 25.0% |
! | TTCAAAATAAGGTTGCTAAA+TGG | - | chr7.4:93745449-93745468 | None:intergenic | 25.0% |
! | TTCAACTTCAGTAAAATATC+AGG | + | chr7.4:93747382-93747401 | MS.gene54372:CDS | 25.0% |
! | TTGATCGATAATGAATACAA+AGG | + | chr7.4:93744390-93744409 | MS.gene54372:intron | 25.0% |
! | TTGCATATATAAGATAGCAA+GGG | + | chr7.4:93745760-93745779 | MS.gene54372:CDS | 25.0% |
! | TTTGAATTTCATTCAACTTG+AGG | + | chr7.4:93743722-93743741 | MS.gene54372:CDS | 25.0% |
!! | AACTTTCTGATTTGAAGAAA+TGG | + | chr7.4:93744093-93744112 | MS.gene54372:CDS | 25.0% |
!! | ATGTATATGCTAAACTTTTG+AGG | - | chr7.4:93746715-93746734 | None:intergenic | 25.0% |
!! | GAAAGTGTATAATGAAAGTT+TGG | + | chr7.4:93744184-93744203 | MS.gene54372:CDS | 25.0% |
!! | TATTTTACTGAAGTTGAACA+AGG | - | chr7.4:93747380-93747399 | None:intergenic | 25.0% |
!! | TTTTCTTACCATCAATAGTA+GGG | - | chr7.4:93745158-93745177 | None:intergenic | 25.0% |
!! | TTTTTCTTACCATCAATAGT+AGG | - | chr7.4:93745159-93745178 | None:intergenic | 25.0% |
!!! | AAAATCCATTTGTTATCTGA+AGG | - | chr7.4:93745204-93745223 | None:intergenic | 25.0% |
!!! | AACTTGTTAGAATCAATGAT+TGG | + | chr7.4:93747133-93747152 | MS.gene54372:CDS | 25.0% |
!!! | ATTATTTGTTATCATTCCAG+TGG | - | chr7.4:93746848-93746867 | None:intergenic | 25.0% |
!!! | ATTTCATTTGCTTTTTCATG+TGG | - | chr7.4:93745102-93745121 | None:intergenic | 25.0% |
!!! | CAAAACACTTTTGAAGATTA+TGG | + | chr7.4:93747868-93747887 | MS.gene54372:CDS | 25.0% |
!!! | CTCATTATATGTGTCATTTT+AGG | + | chr7.4:93747490-93747509 | MS.gene54372:intron | 25.0% |
!!! | TAGTATTGCATTTTTTGTTG+GGG | - | chr7.4:93745834-93745853 | None:intergenic | 25.0% |
!!! | TTGAGGTTGTTTTTATAAGA+GGG | + | chr7.4:93746488-93746507 | MS.gene54372:intron | 25.0% |
AAAGAGAAGAATTCCAGAAA+TGG | + | chr7.4:93745018-93745037 | MS.gene54372:CDS | 30.0% | |
AAAGGTGAAATTATTACCAC+AGG | - | chr7.4:93744802-93744821 | None:intergenic | 30.0% | |
AAGAAAAGAAGGAACAATTG+GGG | + | chr7.4:93743415-93743434 | MS.gene54372:CDS | 30.0% | |
AATAATATTTGACAGCGGAA+AGG | + | chr7.4:93744967-93744986 | MS.gene54372:intron | 30.0% | |
AATTCATCAGATAGTGATAG+TGG | + | chr7.4:93743345-93743364 | MS.gene54372:CDS | 30.0% | |
AGATAAAGTCAGTTAATGGT+TGG | - | chr7.4:93744484-93744503 | None:intergenic | 30.0% | |
AGCATATATGAATCCTTCAA+TGG | - | chr7.4:93743447-93743466 | None:intergenic | 30.0% | |
ATAGTAGGGGTTATCTTATT+TGG | - | chr7.4:93745144-93745163 | None:intergenic | 30.0% | |
ATATGCAACTAGAATCTGAT+CGG | - | chr7.4:93745748-93745767 | None:intergenic | 30.0% | |
ATTATCTTCCTTGAAAGAAG+AGG | + | chr7.4:93745601-93745620 | MS.gene54372:CDS | 30.0% | |
ATTGCTTATCTGATATCTTG+AGG | - | chr7.4:93743217-93743236 | None:intergenic | 30.0% | |
CAAAGAAAAGAAGGAACAAT+TGG | + | chr7.4:93743413-93743432 | MS.gene54372:CDS | 30.0% | |
CAGAATAGTGTTATCAATGA+CGG | - | chr7.4:93746191-93746210 | None:intergenic | 30.0% | |
CTGTCAATAATATTTGACAG+CGG | + | chr7.4:93744962-93744981 | MS.gene54372:intron | 30.0% | |
CTTATTACACTTTGAACTAC+TGG | + | chr7.4:93746385-93746404 | MS.gene54372:CDS | 30.0% | |
CTTCAGTAAAATATCAGGTT+CGG | + | chr7.4:93747387-93747406 | MS.gene54372:intron | 30.0% | |
CTTGTCTAATAACTGTTACA+TGG | + | chr7.4:93747227-93747246 | MS.gene54372:CDS | 30.0% | |
CTTTCTAAACAGTATAATGC+TGG | + | chr7.4:93747262-93747281 | MS.gene54372:CDS | 30.0% | |
GAAAGTCTCTTTAACATTGA+AGG | - | chr7.4:93746586-93746605 | None:intergenic | 30.0% | |
GCTAAGCATATAATCTCTTT+AGG | + | chr7.4:93745638-93745657 | MS.gene54372:CDS | 30.0% | |
GGAAACAAGTTAAATAACGA+AGG | + | chr7.4:93743285-93743304 | MS.gene54372:CDS | 30.0% | |
GTAGTTCAAAGTGTAATAAG+AGG | - | chr7.4:93746385-93746404 | None:intergenic | 30.0% | |
GTATCAATGTTGTCAAATAG+AGG | + | chr7.4:93746011-93746030 | MS.gene54372:intron | 30.0% | |
GTCACTTAATGAATGTATCT+AGG | + | chr7.4:93747042-93747061 | MS.gene54372:intron | 30.0% | |
GTTGCATATATAAGATAGCA+AGG | + | chr7.4:93745759-93745778 | MS.gene54372:CDS | 30.0% | |
GTTTAGCATATACATAGAGA+TGG | + | chr7.4:93746720-93746739 | MS.gene54372:CDS | 30.0% | |
TAGACATGTAGATTTGATGA+GGG | + | chr7.4:93747204-93747223 | MS.gene54372:CDS | 30.0% | |
TATATGCTTAGACAATTGAG+TGG | + | chr7.4:93743459-93743478 | MS.gene54372:CDS | 30.0% | |
TATGGACTCTTGTATAAACA+AGG | - | chr7.4:93744417-93744436 | None:intergenic | 30.0% | |
TATTGACAGTGTGAAATATG+AGG | - | chr7.4:93744951-93744970 | None:intergenic | 30.0% | |
TCAAAGATATTTCTTGTCAG+AGG | - | chr7.4:93745308-93745327 | None:intergenic | 30.0% | |
TCATTGACAAAAGTTCAGTA+AGG | - | chr7.4:93745859-93745878 | None:intergenic | 30.0% | |
TCTGACAAGAAATATCTTTG+AGG | + | chr7.4:93745307-93745326 | MS.gene54372:CDS | 30.0% | |
TGACTTTATCTCTAATGACA+GGG | + | chr7.4:93744493-93744512 | MS.gene54372:intron | 30.0% | |
TGCATATATAAGATAGCAAG+GGG | + | chr7.4:93745761-93745780 | MS.gene54372:CDS | 30.0% | |
TTAGAATCAATGATTGGTGA+TGG | + | chr7.4:93747139-93747158 | MS.gene54372:CDS | 30.0% | |
TTCTATGTATCCATTCAGAA+TGG | - | chr7.4:93743646-93743665 | None:intergenic | 30.0% | |
TTTCTTACCATCAATAGTAG+GGG | - | chr7.4:93745157-93745176 | None:intergenic | 30.0% | |
! | ATAACCTGCTTTCTTTAAGA+TGG | - | chr7.4:93746875-93746894 | None:intergenic | 30.0% |
! | ATGGAGTAGTTGATGTATTA+TGG | + | chr7.4:93747915-93747934 | MS.gene54372:CDS | 30.0% |
! | GTGGACTGTCTAATTAAATA+AGG | + | chr7.4:93747636-93747655 | MS.gene54372:intron | 30.0% |
! | TCTAAAGTATTTCCTGTTAC+CGG | - | chr7.4:93745413-93745432 | None:intergenic | 30.0% |
! | TGATTTTTCCTCTTCTTTCA+AGG | - | chr7.4:93745612-93745631 | None:intergenic | 30.0% |
! | TTTTATCAGTGATGTACACT+TGG | - | chr7.4:93745946-93745965 | None:intergenic | 30.0% |
!! | CAGATAACAAATGGATTTTC+TGG | + | chr7.4:93745205-93745224 | MS.gene54372:intron | 30.0% |
!! | TCTCAACCTATTTTTCACTT+TGG | - | chr7.4:93747702-93747721 | None:intergenic | 30.0% |
!! | TTCTAACGGATGAAGATTTT+CGG | + | chr7.4:93743670-93743689 | MS.gene54372:CDS | 30.0% |
!!! | AGAGCTATTTTAATCTTGTG+TGG | + | chr7.4:93746811-93746830 | MS.gene54372:CDS | 30.0% |
!!! | ATATTTTCTAGTGCCATTTC+TGG | - | chr7.4:93745034-93745053 | None:intergenic | 30.0% |
!!! | CCGAAACTTTCTTTTTTCTT+TGG | - | chr7.4:93743983-93744002 | None:intergenic | 30.0% |
!!! | GTTGAGGTTGTTTTTATAAG+AGG | + | chr7.4:93746487-93746506 | MS.gene54372:intron | 30.0% |
AACCTTGTCATCATTTAAGC+TGG | - | chr7.4:93746776-93746795 | None:intergenic | 35.0% | |
AAGAAAACTAACCGACGAAA+TGG | - | chr7.4:93746962-93746981 | None:intergenic | 35.0% | |
AAGATAACCCCTACTATTGA+TGG | + | chr7.4:93745147-93745166 | MS.gene54372:CDS | 35.0% | |
AATGGAAACTAGTGCTTTCA+CGG | - | chr7.4:93743628-93743647 | None:intergenic | 35.0% | |
AATTCATGAACTGGTACTCT+TGG | - | chr7.4:93744772-93744791 | None:intergenic | 35.0% | |
ACTACCATCTTAAAGAAAGC+AGG | + | chr7.4:93746868-93746887 | MS.gene54372:CDS | 35.0% | |
ACTTCAACTTCATAGACTTG+AGG | - | chr7.4:93744622-93744641 | None:intergenic | 35.0% | |
AGAAAAGAAGGAACAATTGG+GGG | + | chr7.4:93743416-93743435 | MS.gene54372:CDS | 35.0% | |
AGAAATGGATGAAGAGTTCA+TGG | + | chr7.4:93747108-93747127 | MS.gene54372:CDS | 35.0% | |
AGAGGACAAATAAATTCCTG+TGG | - | chr7.4:93745290-93745309 | None:intergenic | 35.0% | |
AGCTTCCTTCAGATAACAAA+TGG | + | chr7.4:93745196-93745215 | MS.gene54372:intron | 35.0% | |
ATAAATTCCTGTGGTATGCT+TGG | - | chr7.4:93745281-93745300 | None:intergenic | 35.0% | |
ATCAACTACTCCATGAAGAA+GGG | - | chr7.4:93747909-93747928 | None:intergenic | 35.0% | |
ATCAAGGCATGGTTTCAAAA+GGG | + | chr7.4:93745374-93745393 | MS.gene54372:CDS | 35.0% | |
ATGCAGCTTAGCATTATTAC+TGG | + | chr7.4:93743858-93743877 | MS.gene54372:CDS | 35.0% | |
CAAGTGTCTAATGTGAAAAG+AGG | + | chr7.4:93743390-93743409 | MS.gene54372:CDS | 35.0% | |
CAGATTCTCCCTATACAAAA+TGG | - | chr7.4:93747960-93747979 | None:intergenic | 35.0% | |
CGATCAAACGCTTCAAAATA+AGG | - | chr7.4:93745460-93745479 | None:intergenic | 35.0% | |
CTAGACATGTAGATTTGATG+AGG | + | chr7.4:93747203-93747222 | MS.gene54372:CDS | 35.0% | |
CTGACTTTATCTCTAATGAC+AGG | + | chr7.4:93744492-93744511 | MS.gene54372:intron | 35.0% | |
GAAAAGAGGCAAAGAAAAGA+AGG | + | chr7.4:93743404-93743423 | MS.gene54372:CDS | 35.0% | |
GAAGAAATGGTATGACAACA+AGG | + | chr7.4:93744106-93744125 | MS.gene54372:CDS | 35.0% | |
GAGGTTTGAACAAGGAAATT+TGG | + | chr7.4:93745682-93745701 | MS.gene54372:CDS | 35.0% | |
GATATTGTTGCCTGAACTTT+GGG | + | chr7.4:93744052-93744071 | MS.gene54372:CDS | 35.0% | |
GATCACTTGAATTACCATGA+TGG | - | chr7.4:93743116-93743135 | None:intergenic | 35.0% | |
GCTAAATGTAACCATTTCGT+CGG | + | chr7.4:93746948-93746967 | MS.gene54372:CDS | 35.0% | |
GGAAGATGAAGAAGAAGAAA+TGG | + | chr7.4:93747093-93747112 | MS.gene54372:intron | 35.0% | |
GGATCAAATATACAACACTG+AGG | - | chr7.4:93743962-93743981 | None:intergenic | 35.0% | |
GGCATATAGAATTCATGAAC+TGG | - | chr7.4:93744781-93744800 | None:intergenic | 35.0% | |
GTAGTAAAGTAGTAGTTAGG+TGG | + | chr7.4:93747617-93747636 | MS.gene54372:intron | 35.0% | |
GTGGTAGTAAAGTAGTAGTT+AGG | + | chr7.4:93747614-93747633 | MS.gene54372:intron | 35.0% | |
TCAAAGAGGAGAAACAATTG+TGG | - | chr7.4:93743707-93743726 | None:intergenic | 35.0% | |
TCAAGATCTTCTTTCCATCA+TGG | + | chr7.4:93743099-93743118 | MS.gene54372:CDS | 35.0% | |
TCATGAATTCTATATGCCTG+TGG | + | chr7.4:93744783-93744802 | MS.gene54372:intron | 35.0% | |
TCATTCCAGTGGAAGAAAAA+TGG | - | chr7.4:93746837-93746856 | None:intergenic | 35.0% | |
TTTGAGAGGCAAAATCAAGA+AGG | - | chr7.4:93745511-93745530 | None:intergenic | 35.0% | |
! | CTCTTTTCACATTAGACACT+TGG | - | chr7.4:93743392-93743411 | None:intergenic | 35.0% |
! | CTGAACTTTTGTCAATGAAG+AGG | + | chr7.4:93745861-93745880 | MS.gene54372:CDS | 35.0% |
! | CTTTGAAAGAAAAGCCATCA+AGG | + | chr7.4:93745358-93745377 | MS.gene54372:CDS | 35.0% |
! | GATGTCACTTCTTTCATAAG+TGG | + | chr7.4:93746269-93746288 | MS.gene54372:CDS | 35.0% |
! | TAAGTTAAAAAAGCGCGATG+AGG | + | chr7.4:93745553-93745572 | MS.gene54372:CDS | 35.0% |
!! | CATAAAGTGCTGTCAAATAG+TGG | + | chr7.4:93746113-93746132 | MS.gene54372:intron | 35.0% |
!! | CTATGAAGTTGAAGTTGATG+AGG | + | chr7.4:93744627-93744646 | MS.gene54372:CDS | 35.0% |
!! | CTTGATGGCTTTTCTTTCAA+AGG | - | chr7.4:93745360-93745379 | None:intergenic | 35.0% |
!!! | AACTGCATGCCATTTTGTAT+AGG | + | chr7.4:93747948-93747967 | MS.gene54372:CDS | 35.0% |
!!! | ACTGCATGCCATTTTGTATA+GGG | + | chr7.4:93747949-93747968 | MS.gene54372:CDS | 35.0% |
!!! | GCTATCGTTTTCAAGTTACA+AGG | + | chr7.4:93745575-93745594 | MS.gene54372:CDS | 35.0% |
AAAGAAAAGCCATCAAGGCA+TGG | + | chr7.4:93745363-93745382 | MS.gene54372:CDS | 40.0% | |
AAAGGGAAACAGAACATGTC+CGG | + | chr7.4:93745391-93745410 | MS.gene54372:CDS | 40.0% | |
AAAGGTTTGACCTGACTCTA+AGG | - | chr7.4:93745342-93745361 | None:intergenic | 40.0% | |
AACAACCTCAACATCATGCA+AGG | - | chr7.4:93746479-93746498 | None:intergenic | 40.0% | |
AACTGTGAGAGAGGTTCTTA+TGG | + | chr7.4:93744667-93744686 | MS.gene54372:CDS | 40.0% | |
AAGTGATCCTCTTCACTCTT+TGG | + | chr7.4:93743128-93743147 | MS.gene54372:CDS | 40.0% | |
ACTCCAACTATTCCTTCCAT+CGG | + | chr7.4:93744266-93744285 | MS.gene54372:CDS | 40.0% | |
ATATTCTCCAAGCATACCAC+AGG | + | chr7.4:93745271-93745290 | MS.gene54372:CDS | 40.0% | |
ATTATCCATTACGAGTCGAC+AGG | + | chr7.4:93744298-93744317 | MS.gene54372:CDS | 40.0% | |
ATTCCGATGGAAGGAATAGT+TGG | - | chr7.4:93744272-93744291 | None:intergenic | 40.0% | |
ATTGGAGTGGTTGAAAGTAG+TGG | + | chr7.4:93747595-93747614 | MS.gene54372:intron | 40.0% | |
CACTTCTTTCATAAGTGGCT+TGG | + | chr7.4:93746274-93746293 | MS.gene54372:CDS | 40.0% | |
CATCAACTACTCCATGAAGA+AGG | - | chr7.4:93747910-93747929 | None:intergenic | 40.0% | |
CATCAAGGCATGGTTTCAAA+AGG | + | chr7.4:93745373-93745392 | MS.gene54372:CDS | 40.0% | |
CGATATTGTTGCCTGAACTT+TGG | + | chr7.4:93744051-93744070 | MS.gene54372:CDS | 40.0% | |
CTAGAACATATTTGCACTGC+AGG | + | chr7.4:93746681-93746700 | MS.gene54372:intron | 40.0% | |
CTATCTTCCAAAGAGTGAAG+AGG | - | chr7.4:93743138-93743157 | None:intergenic | 40.0% | |
CTCAAGACTTGTAATCACCT+TGG | - | chr7.4:93743766-93743785 | None:intergenic | 40.0% | |
CTGAGAGATGATAGCTAAGA+AGG | - | chr7.4:93747302-93747321 | None:intergenic | 40.0% | |
GACACATATAATGAGACGGA+GGG | - | chr7.4:93747485-93747504 | None:intergenic | 40.0% | |
GCTCAAGTTCTTCATTCTCA+AGG | - | chr7.4:93747336-93747355 | None:intergenic | 40.0% | |
GGTTGAGACAATGCAATGAT+CGG | + | chr7.4:93747714-93747733 | MS.gene54372:intron | 40.0% | |
TAATAAGAGGACAGCGATGA+GGG | - | chr7.4:93746372-93746391 | None:intergenic | 40.0% | |
TAATGACAGGGAAGTTCACT+TGG | + | chr7.4:93744505-93744524 | MS.gene54372:intron | 40.0% | |
TCAAACTGTGGGAAATTCGA+AGG | + | chr7.4:93745526-93745545 | MS.gene54372:CDS | 40.0% | |
TCAACTACTCCATGAAGAAG+GGG | - | chr7.4:93747908-93747927 | None:intergenic | 40.0% | |
TCTTGAGCTTCTTCACAGTA+AGG | + | chr7.4:93745802-93745821 | MS.gene54372:CDS | 40.0% | |
TGACACATATAATGAGACGG+AGG | - | chr7.4:93747486-93747505 | None:intergenic | 40.0% | |
TGCCAGCTTAAATGATGACA+AGG | + | chr7.4:93746771-93746790 | MS.gene54372:CDS | 40.0% | |
TGCTACATCAAGCATATGAG+TGG | - | chr7.4:93744906-93744925 | None:intergenic | 40.0% | |
TTCTTTCGTTTCTCTGTAGG+AGG | + | chr7.4:93745663-93745682 | MS.gene54372:CDS | 40.0% | |
! | AACGGATGAAGATTTTCGGT+CGG | + | chr7.4:93743674-93743693 | MS.gene54372:CDS | 40.0% |
! | AATGATGGAATTCCGATGGA+AGG | - | chr7.4:93744281-93744300 | None:intergenic | 40.0% |
! | CTCAAGTACGATTTTACGTG+CGG | + | chr7.4:93743897-93743916 | MS.gene54372:CDS | 40.0% |
! | GATTTTGCCTCTCAAACTGT+GGG | + | chr7.4:93745515-93745534 | MS.gene54372:CDS | 40.0% |
! | GCACTAGTTTCCATTCTGAA+TGG | + | chr7.4:93743633-93743652 | MS.gene54372:CDS | 40.0% |
! | GGATAATGATGGAATTCCGA+TGG | - | chr7.4:93744285-93744304 | None:intergenic | 40.0% |
! | TACAAAGATTGGCTCAGTGA+AGG | + | chr7.4:93744236-93744255 | MS.gene54372:CDS | 40.0% |
! | TCAAGTACGATTTTACGTGC+GGG | + | chr7.4:93743898-93743917 | MS.gene54372:CDS | 40.0% |
! | TGAAGCGTTTGATCGATAAC+TGG | + | chr7.4:93745465-93745484 | MS.gene54372:CDS | 40.0% |
! | TGATTTTGCCTCTCAAACTG+TGG | + | chr7.4:93745514-93745533 | MS.gene54372:CDS | 40.0% |
! | TTCTTTCATAAGTGGCTTGG+TGG | + | chr7.4:93746277-93746296 | MS.gene54372:CDS | 40.0% |
!! | AGCTTTGAAAACTGTGAGAG+AGG | + | chr7.4:93744658-93744677 | MS.gene54372:CDS | 40.0% |
!! | CGACTCGTAATGGATAATGA+TGG | - | chr7.4:93744296-93744315 | None:intergenic | 40.0% |
!! | TAATACCTGTCGACTCGTAA+TGG | - | chr7.4:93744306-93744325 | None:intergenic | 40.0% |
!! | TCTTTCATAAGTGGCTTGGT+GGG | + | chr7.4:93746278-93746297 | MS.gene54372:CDS | 40.0% |
!!! | CTTTTGAAACCATGCCTTGA+TGG | - | chr7.4:93745375-93745394 | None:intergenic | 40.0% |
AACAGAACATGTCCGGTAAC+AGG | + | chr7.4:93745398-93745417 | MS.gene54372:CDS | 45.0% | |
AATAAGAGGACAGCGATGAG+GGG | - | chr7.4:93746371-93746390 | None:intergenic | 45.0% | |
AATAGACGCTCCCAAAGTTC+AGG | - | chr7.4:93744065-93744084 | None:intergenic | 45.0% | |
ATTGGGGGAAAAGCCATTGA+AGG | + | chr7.4:93743431-93743450 | MS.gene54372:CDS | 45.0% | |
CACAGAAAAAACTGCTGCTG+AGG | + | chr7.4:93743800-93743819 | MS.gene54372:CDS | 45.0% | |
CGAATTTCCCACAGTTTGAG+AGG | - | chr7.4:93745525-93745544 | None:intergenic | 45.0% | |
CTCTGTAGGAGGTTTGAACA+AGG | + | chr7.4:93745674-93745693 | MS.gene54372:CDS | 45.0% | |
GAACCAGTTACCTTAGAGTC+AGG | + | chr7.4:93745329-93745348 | MS.gene54372:CDS | 45.0% | |
GAGATGATAGCTAAGAAGGC+AGG | - | chr7.4:93747298-93747317 | None:intergenic | 45.0% | |
GATATTGCTCCCCTTCTTCA+TGG | + | chr7.4:93747896-93747915 | MS.gene54372:CDS | 45.0% | |
GCCTTGATGAAGAGGATCAA+CGG | + | chr7.4:93746926-93746945 | MS.gene54372:CDS | 45.0% | |
GCTATCATCTCTCAGCTGAA+AGG | + | chr7.4:93747307-93747326 | MS.gene54372:CDS | 45.0% | |
GGGTTCTTTCGTTTCTCTGT+AGG | + | chr7.4:93745660-93745679 | MS.gene54372:CDS | 45.0% | |
GTAATAAGAGGACAGCGATG+AGG | - | chr7.4:93746373-93746392 | None:intergenic | 45.0% | |
TGATCCTCTTCATCAAGGCT+AGG | - | chr7.4:93746925-93746944 | None:intergenic | 45.0% | |
! | GTTTTGCGACTCTCCTTTTC+AGG | + | chr7.4:93744022-93744041 | MS.gene54372:CDS | 45.0% |
! | TTTTTGCTGACCATTGCCTG+TGG | - | chr7.4:93744571-93744590 | None:intergenic | 45.0% |
!! | ATCTCCTAGCCTTGATGAAG+AGG | + | chr7.4:93746918-93746937 | MS.gene54372:CDS | 45.0% |
!! | CTTAGCCTTGCATGATGTTG+AGG | + | chr7.4:93746471-93746490 | MS.gene54372:intron | 45.0% |
!! | TGACCTGACTCTAAGGTAAC+TGG | - | chr7.4:93745335-93745354 | None:intergenic | 45.0% |
!!! | TGTGGCCATTTTTCTTCCAC+TGG | + | chr7.4:93746829-93746848 | MS.gene54372:CDS | 45.0% |
AATATCGTCCGCGCCTGAAA+AGG | - | chr7.4:93744038-93744057 | None:intergenic | 50.0% | |
AGCAGCTTCTTGCACAGGAA+GGG | + | chr7.4:93743046-93743065 | MS.gene54372:CDS | 50.0% | |
ATAACGGCGCTATAGCGTAG+TGG | + | chr7.4:93746049-93746068 | MS.gene54372:intron | 50.0% | |
CAAGGACAGCTGCAGAAGAA+TGG | + | chr7.4:93744995-93745014 | MS.gene54372:CDS | 50.0% | |
CAGGAAGGGTTCAAAGCAAG+CGG | + | chr7.4:93743060-93743079 | MS.gene54372:CDS | 50.0% | |
GACAGCGGAAAGGAACATCA+AGG | + | chr7.4:93744977-93744996 | MS.gene54372:intron | 50.0% | |
GCCGTTGATCCTCTTCATCA+AGG | - | chr7.4:93746930-93746949 | None:intergenic | 50.0% | |
! | CAAGCGGCAGAAAAGTGCAA+AGG | + | chr7.4:93743076-93743095 | MS.gene54372:CDS | 50.0% |
! | GCGATGAGGGGCTTTTCAAT+TGG | - | chr7.4:93746359-93746378 | None:intergenic | 50.0% |
! | TGACGGATCGCAGAGTATAG+CGG | - | chr7.4:93746174-93746193 | None:intergenic | 50.0% |
! | TTTGGAGCAGCTTCTTGCAC+AGG | + | chr7.4:93743041-93743060 | MS.gene54372:CDS | 50.0% |
!! | AGAGCGCAATTCTGAGACCA+AGG | + | chr7.4:93743746-93743765 | MS.gene54372:CDS | 50.0% |
ACCATTCTCGCCACAGGCAA+TGG | + | chr7.4:93744558-93744577 | MS.gene54372:CDS | 55.0% | |
ACCATTGCCTGTGGCGAGAA+TGG | - | chr7.4:93744562-93744581 | None:intergenic | 55.0% | |
CAACGAACCATTCTCGCCAC+AGG | + | chr7.4:93744552-93744571 | MS.gene54372:CDS | 55.0% | |
CTGTGGCGAGAATGGTTCGT+TGG | - | chr7.4:93744554-93744573 | None:intergenic | 55.0% | |
GAGCAGCTTCTTGCACAGGA+AGG | + | chr7.4:93743045-93743064 | MS.gene54372:CDS | 55.0% | |
GGCATCAAGTGCCTCTGCAA+TGG | - | chr7.4:93746755-93746774 | None:intergenic | 55.0% | |
GGCTGTGAATGCCATTGCAG+AGG | + | chr7.4:93746741-93746760 | MS.gene54372:CDS | 55.0% | |
!! | GCGACTCTCCTTTTCAGGCG+CGG | + | chr7.4:93744027-93744046 | MS.gene54372:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 93743030 | 93747982 | 93743030 | ID=MS.gene54372 |
chr7.4 | mRNA | 93743030 | 93747982 | 93743030 | ID=MS.gene54372.t1;Parent=MS.gene54372 |
chr7.4 | exon | 93743030 | 93744319 | 93743030 | ID=MS.gene54372.t1.exon1;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93743030 | 93744319 | 93743030 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93744514 | 93744801 | 93744514 | ID=MS.gene54372.t1.exon2;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93744514 | 93744801 | 93744514 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93744982 | 93745110 | 93744982 | ID=MS.gene54372.t1.exon3;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93744982 | 93745110 | 93744982 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93745141 | 93745168 | 93745141 | ID=MS.gene54372.t1.exon4;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93745141 | 93745168 | 93745141 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93745267 | 93745882 | 93745267 | ID=MS.gene54372.t1.exon5;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93745267 | 93745882 | 93745267 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93746262 | 93746406 | 93746262 | ID=MS.gene54372.t1.exon6;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93746262 | 93746406 | 93746262 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93746703 | 93746969 | 93746703 | ID=MS.gene54372.t1.exon7;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93746703 | 93746969 | 93746703 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93747094 | 93747403 | 93747094 | ID=MS.gene54372.t1.exon8;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93747094 | 93747403 | 93747094 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
chr7.4 | exon | 93747864 | 93747982 | 93747864 | ID=MS.gene54372.t1.exon9;Parent=MS.gene54372.t1 |
chr7.4 | CDS | 93747864 | 93747982 | 93747864 | ID=cds.MS.gene54372.t1;Parent=MS.gene54372.t1 |
Gene Sequence |
Protein sequence |