Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55150.t1 | XP_003616603.2 | 98.2 | 446 | 8 | 0 | 1 | 446 | 69 | 514 | 1.30E-245 | 858.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55150.t1 | Q0JQS5 | 73.7 | 403 | 105 | 1 | 44 | 446 | 143 | 544 | 1.9e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55150.t1 | G7KGX9 | 98.2 | 446 | 8 | 0 | 1 | 446 | 69 | 514 | 9.3e-246 | 858.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene55150 | 0.802841 | 4.63E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene55150 | 0.867909 | 9.67E-66 | -1.69E-46 |
| MS.gene049491 | MS.gene55150 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene55150 | 0.827329 | 1.66E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene55150 | 0.817077 | 3.98E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene55150 | 0.810023 | 1.42E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene55150 | 0.806765 | 7.02E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene55150 | 0.821201 | 4.58E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene55150 | 0.813544 | 2.43E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene55150 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene55150 | 0.835485 | 1.63E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene55150 | 0.804275 | 2.34E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene55150 | 0.810538 | 1.10E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene55150 | 0.809606 | 1.74E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene55150 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene55150 | 0.838272 | 3.17E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene55150 | 0.815248 | 1.02E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene55150 | 0.813981 | 1.94E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene55150 | 0.811422 | 7.06E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene55150 | 0.830828 | 2.36E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene55150 | 0.802659 | 5.05E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene55150 | 0.802368 | 5.80E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene55150 | 0.844912 | 5.63E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene55150 | 0.803793 | 2.94E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene55150 | 0.816628 | 5.01E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene55150 | 0.815878 | 7.37E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene55150 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene55150 | 0.82612 | 3.23E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene55150 | 0.809219 | 2.11E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene55150 | 0.801768 | 7.71E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene55150 | 0.816591 | 5.11E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene55150 | 0.816816 | 4.55E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene55150 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene55150 | 0.836418 | 9.47E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene55150 | 0.802557 | 5.30E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene55150 | 0.823048 | 1.71E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene55150 | 0.807544 | 4.80E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene55150 | 0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene55150 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene056664 | MS.gene55150 | 0.802542 | 5.34E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene55150 | 0.804667 | 1.94E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene55150 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene55150 | 0.823794 | 1.14E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene55150 | 0.83912 | 1.92E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene55150 | 0.818807 | 1.62E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene55150 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene55150 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene55150 | 0.848381 | 6.36E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene55150 | 0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene55150 | 0.840292 | 9.49E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene55150 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene55150 | 0.82256 | 2.22E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene55150 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene55150 | 0.801385 | 9.23E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene55150 | 0.806703 | 7.23E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene55150 | 0.833786 | 4.37E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene55150 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene55150 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene55150 | 0.846509 | 2.08E-59 | -1.69E-46 |
| MS.gene059141 | MS.gene55150 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene55150 | 0.836944 | 6.95E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene55150 | 0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene55150 | 0.822467 | 2.33E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene55150 | 0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene55150 | 0.827859 | 1.24E-54 | -1.69E-46 |
| MS.gene059858 | MS.gene55150 | 0.828815 | 7.29E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene55150 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene55150 | 0.833591 | 4.88E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene55150 | 0.809012 | 2.33E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene55150 | 0.802725 | 4.90E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene55150 | 0.813773 | 2.16E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene55150 | 0.803762 | 2.99E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene55150 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene55150 | 0.826499 | 2.62E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene55150 | 0.804084 | 2.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55150.t1 | MTR_5g082260 | 98.206 | 446 | 8 | 0 | 1 | 446 | 69 | 514 | 0.0 | 872 |
| MS.gene55150.t1 | MTR_7g086430 | 30.788 | 419 | 250 | 7 | 47 | 433 | 115 | 525 | 8.57e-47 | 169 |
| MS.gene55150.t1 | MTR_7g086430 | 30.464 | 302 | 170 | 7 | 47 | 316 | 115 | 408 | 4.32e-30 | 121 |
| MS.gene55150.t1 | MTR_4g010130 | 27.623 | 467 | 292 | 14 | 1 | 433 | 91 | 545 | 1.99e-28 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55150.t1 | AT5G05740 | 70.089 | 448 | 118 | 2 | 1 | 438 | 73 | 514 | 0.0 | 626 |
| MS.gene55150.t1 | AT5G05740 | 70.089 | 448 | 118 | 2 | 1 | 438 | 76 | 517 | 0.0 | 626 |
| MS.gene55150.t1 | AT5G05740 | 65.828 | 477 | 118 | 3 | 1 | 438 | 76 | 546 | 0.0 | 612 |
| MS.gene55150.t1 | AT5G35220 | 28.817 | 465 | 291 | 8 | 3 | 433 | 73 | 531 | 2.59e-49 | 176 |
| MS.gene55150.t1 | AT1G17870 | 27.078 | 421 | 264 | 11 | 48 | 433 | 140 | 552 | 1.84e-22 | 100 |
| MS.gene55150.t1 | AT5G35210 | 39.167 | 120 | 70 | 1 | 239 | 355 | 1542 | 1661 | 8.29e-17 | 84.0 |
Find 108 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGGGTTTCATCTATAAA+TGG | 0.131698 | 5.2:-70265838 | None:intergenic |
| GGTCTTGTTCTTCTGCTTCT+AGG | 0.158404 | 5.2:+70263755 | MS.gene55150:CDS |
| CAATAAATCGGATTGCAAAT+TGG | 0.179236 | 5.2:-70262719 | None:intergenic |
| CAAGCTTAACTCCAAGGTTT+TGG | 0.213368 | 5.2:-70263218 | None:intergenic |
| TGACAATCTGAATTTGTTAA+AGG | 0.219792 | 5.2:+70263125 | MS.gene55150:CDS |
| TCATCTGATAGAGGAGAAAT+TGG | 0.248471 | 5.2:-70265730 | None:intergenic |
| ACAAGAGGGTTGATAGAAAT+TGG | 0.269455 | 5.2:-70264060 | None:intergenic |
| CATTTGTTATAGGATAAATT+TGG | 0.280363 | 5.2:+70262436 | MS.gene55150:intron |
| CTATCAACCCTCTTGTGATC+TGG | 0.284156 | 5.2:+70264067 | MS.gene55150:CDS |
| AATAAATCGGATTGCAAATT+GGG | 0.290251 | 5.2:-70262718 | None:intergenic |
| CTTGTTACTGCACTTATTAT+CGG | 0.320323 | 5.2:+70263165 | MS.gene55150:CDS |
| ACCCTCTTGTGATCTGGGCT+TGG | 0.322194 | 5.2:+70264073 | MS.gene55150:CDS |
| AAATGGAGAAACACAATCTT+TGG | 0.324342 | 5.2:+70259501 | MS.gene55150:CDS |
| CCCTCTTGTGATCTGGGCTT+GGG | 0.337951 | 5.2:+70264074 | MS.gene55150:CDS |
| TGGTGGCAGATAGGCTCTTT+TGG | 0.338317 | 5.2:+70263644 | MS.gene55150:intron |
| CATCCTCAGGATTGACTAGA+AGG | 0.346366 | 5.2:-70262477 | None:intergenic |
| TGGTTTGGTGCTGCGTCTTT+TGG | 0.348500 | 5.2:+70262658 | MS.gene55150:CDS |
| TATCAACCCTCTTGTGATCT+GGG | 0.351252 | 5.2:+70264068 | MS.gene55150:CDS |
| TCTGGTTGTAAAGTAGTTCT+TGG | 0.370039 | 5.2:-70262523 | None:intergenic |
| GCAGCTGCTGGACCAATTGC+CGG | 0.374813 | 5.2:+70263722 | MS.gene55150:CDS |
| TTGTTAAAGGATGGCCTACC+TGG | 0.381827 | 5.2:+70263138 | MS.gene55150:CDS |
| TCCCTAACAGCCTCAACAAC+TGG | 0.384146 | 5.2:+70262070 | MS.gene55150:intron |
| TTGTTACTGCACTTATTATC+GGG | 0.385893 | 5.2:+70263166 | MS.gene55150:CDS |
| CGATACCTTTCTTCCCCATA+TGG | 0.388554 | 5.2:-70264166 | None:intergenic |
| CCAATTGCCGGATTTGCATT+GGG | 0.393078 | 5.2:+70263734 | MS.gene55150:CDS |
| ATAAATTTGGAGATGAATAC+AGG | 0.402996 | 5.2:+70262449 | MS.gene55150:CDS |
| CAAGGGTTTCATCTATAAAT+GGG | 0.405206 | 5.2:-70265837 | None:intergenic |
| TTGCTCAAGATTGCAGCTGC+TGG | 0.406860 | 5.2:+70263710 | MS.gene55150:CDS |
| TTTAGCTGTTCTGCATCTAC+AGG | 0.415775 | 5.2:-70259553 | None:intergenic |
| AACAAGACCCAATGCAAATC+CGG | 0.416938 | 5.2:-70263741 | None:intergenic |
| ACCAATTGCCGGATTTGCAT+TGG | 0.418392 | 5.2:+70263733 | MS.gene55150:CDS |
| TTAATGATGTAGCTTTCTAC+TGG | 0.420976 | 5.2:+70265677 | MS.gene55150:CDS |
| CTTGTGATCTGGGCTTGGGC+AGG | 0.421611 | 5.2:+70264078 | MS.gene55150:CDS |
| CACACACCTCGTAAGGATCT+TGG | 0.435624 | 5.2:-70262175 | None:intergenic |
| CAGGCTTCAATTCGCTTCAC+AGG | 0.436252 | 5.2:+70265619 | MS.gene55150:intron |
| CCCAATGCAAATCCGGCAAT+TGG | 0.439644 | 5.2:-70263734 | None:intergenic |
| TCCAGCGGGAATACTGTTGA+TGG | 0.441942 | 5.2:-70264115 | None:intergenic |
| TCCCGTACTTTGTTCCTAGC+TGG | 0.456423 | 5.2:+70263244 | MS.gene55150:CDS |
| GTACTTTGTTCCTAGCTGGC+AGG | 0.463565 | 5.2:+70263248 | MS.gene55150:CDS |
| CTTGGAACGACAACGGCCAC+TGG | 0.467933 | 5.2:-70262505 | None:intergenic |
| TACAAATCAAAATGATGTGC+AGG | 0.470961 | 5.2:+70259594 | MS.gene55150:CDS |
| TCATTTCTAGCTGGCGGCAT+TGG | 0.472509 | 5.2:+70263839 | MS.gene55150:CDS |
| TGTTCTGCATCTACAGGTGG+AGG | 0.473670 | 5.2:-70259547 | None:intergenic |
| CAAAACCTTGGAGTTAAGCT+TGG | 0.474152 | 5.2:+70263219 | MS.gene55150:CDS |
| TTAGCTGTACCTGAGTGGTT+TGG | 0.476022 | 5.2:+70262643 | MS.gene55150:intron |
| TCAGTTATTTCATCTGATAG+AGG | 0.476396 | 5.2:-70265739 | None:intergenic |
| TTTCTAGTTGCCCAAAACCT+TGG | 0.479583 | 5.2:+70263207 | MS.gene55150:CDS |
| AAGTAAGTACGAGTTGTCTC+TGG | 0.481786 | 5.2:-70262541 | None:intergenic |
| GCCACTGGCTTATCATCCTC+AGG | 0.483050 | 5.2:-70262490 | None:intergenic |
| TCTATAAATGGGAAAGGGTA+TGG | 0.488120 | 5.2:-70265826 | None:intergenic |
| TGCCAGCTAGGAACAAAGTA+CGG | 0.492497 | 5.2:-70263246 | None:intergenic |
| ATTCCCGCTGGAGAAATTGA+TGG | 0.493577 | 5.2:+70264126 | MS.gene55150:CDS |
| GCCAGTGGATCACCTCTGCC+AGG | 0.499435 | 5.2:+70261941 | MS.gene55150:CDS |
| CTGATATTCTTCTTGCAAAG+AGG | 0.500793 | 5.2:+70265706 | MS.gene55150:CDS |
| AGAGCAACATACTTGTCATC+AGG | 0.510930 | 5.2:-70265763 | None:intergenic |
| CGATAATAAGTGCAGTAACA+AGG | 0.511270 | 5.2:-70263164 | None:intergenic |
| ATTATCGGGGTACATGAACT+TGG | 0.511624 | 5.2:+70263180 | MS.gene55150:CDS |
| CCTCCATCAATTTCTCCAGC+GGG | 0.528767 | 5.2:-70264129 | None:intergenic |
| CTTGGTAACGTTCTCAAGGA+AGG | 0.529950 | 5.2:+70264033 | MS.gene55150:CDS |
| AATCTGAATTTGTTAAAGGA+TGG | 0.531461 | 5.2:+70263129 | MS.gene55150:CDS |
| TATCATACAACCTGCCAGCT+AGG | 0.533569 | 5.2:-70263258 | None:intergenic |
| ATACCTCCAAGTGACGGTAT+TGG | 0.534054 | 5.2:+70263785 | MS.gene55150:CDS |
| AGATAGGCACACACCTCGTA+AGG | 0.537678 | 5.2:-70262182 | None:intergenic |
| ATTACATCATCCAGTTGTTG+AGG | 0.540848 | 5.2:-70262080 | None:intergenic |
| AGTGCAGTAACAAGGGCTCC+AGG | 0.541596 | 5.2:-70263156 | None:intergenic |
| TTTCACGAGTCATTTCTAGC+TGG | 0.544995 | 5.2:+70263830 | MS.gene55150:CDS |
| TTTCATCTATAAATGGGAAA+GGG | 0.545765 | 5.2:-70265831 | None:intergenic |
| GGGGACATTGCGAAGCAGTA+AGG | 0.546571 | 5.2:-70262698 | None:intergenic |
| GTTTCATCTATAAATGGGAA+AGG | 0.548267 | 5.2:-70265832 | None:intergenic |
| CACGAGTCATTTCTAGCTGG+CGG | 0.551293 | 5.2:+70263833 | MS.gene55150:CDS |
| AGCTGTTCTGCATCTACAGG+TGG | 0.557660 | 5.2:-70259550 | None:intergenic |
| CCCTCCATCAATTTCTCCAG+CGG | 0.559231 | 5.2:-70264130 | None:intergenic |
| TGGAGAAACACAATCTTTGG+AGG | 0.560871 | 5.2:+70259504 | MS.gene55150:CDS |
| ATCACCTCTGCCAGGTGTGA+AGG | 0.562627 | 5.2:+70261949 | MS.gene55150:CDS |
| ACCTGGCAGAGGTGATCCAC+TGG | 0.563174 | 5.2:-70261942 | None:intergenic |
| GTTTCTTGGTAACGTTCTCA+AGG | 0.570500 | 5.2:+70264029 | MS.gene55150:CDS |
| GCCATCAACAGTATTCCCGC+TGG | 0.575199 | 5.2:+70264114 | MS.gene55150:CDS |
| GCCAGCTAGGAACAAAGTAC+GGG | 0.582312 | 5.2:-70263245 | None:intergenic |
| ACACCAATACCGTCACTTGG+AGG | 0.583153 | 5.2:-70263788 | None:intergenic |
| AATATAATCACCTTCACACC+TGG | 0.583486 | 5.2:-70261959 | None:intergenic |
| GATGACAAGTATGTTGCTCT+CGG | 0.586737 | 5.2:+70265766 | MS.gene55150:CDS |
| TGTTACTGCACTTATTATCG+GGG | 0.591294 | 5.2:+70263167 | MS.gene55150:CDS |
| ATCACCTTCACACCTGGCAG+AGG | 0.594663 | 5.2:-70261953 | None:intergenic |
| ACAACACCAATACCGTCACT+TGG | 0.597252 | 5.2:-70263791 | None:intergenic |
| GATAATAAGTGCAGTAACAA+GGG | 0.601874 | 5.2:-70263163 | None:intergenic |
| ACTGTTTCTAGAAACTTGCA+AGG | 0.605257 | 5.2:-70265855 | None:intergenic |
| GGACTCCAAGCTTAACTCCA+AGG | 0.609370 | 5.2:-70263224 | None:intergenic |
| GCCCAAGCCCAGATCACAAG+AGG | 0.612324 | 5.2:-70264075 | None:intergenic |
| TAGGGTGGAGTGCTATTCAA+AGG | 0.612392 | 5.2:+70262273 | MS.gene55150:intron |
| CCCGCTGGAGAAATTGATGG+AGG | 0.614785 | 5.2:+70264129 | MS.gene55150:CDS |
| TTTCCTTCTAGTCAATCCTG+AGG | 0.617367 | 5.2:+70262474 | MS.gene55150:CDS |
| CCGCTGGAGAAATTGATGGA+GGG | 0.622971 | 5.2:+70264130 | MS.gene55150:CDS |
| CTGTTTCTAGAAACTTGCAA+GGG | 0.625123 | 5.2:-70265854 | None:intergenic |
| TAATGATGTAGCTTTCTACT+GGG | 0.625802 | 5.2:+70265678 | MS.gene55150:CDS |
| CAGTAACAAGGGCTCCAGGT+AGG | 0.628013 | 5.2:-70263152 | None:intergenic |
| TTTGTTATACCTCCAAGTGA+CGG | 0.635773 | 5.2:+70263779 | MS.gene55150:CDS |
| GACGCAGCACCAAACCACTC+AGG | 0.637018 | 5.2:-70262652 | None:intergenic |
| GTTCTGCATCTACAGGTGGA+GGG | 0.651010 | 5.2:-70259546 | None:intergenic |
| TGGAGGGTTACTTTGCTCAG+AGG | 0.654797 | 5.2:-70259530 | None:intergenic |
| TCCTGAGGATGATAAGCCAG+TGG | 0.661607 | 5.2:+70262489 | MS.gene55150:CDS |
| TACTGTTGATGGCATTGATG+AGG | 0.664732 | 5.2:-70264104 | None:intergenic |
| ATAAATCGGATTGCAAATTG+GGG | 0.665060 | 5.2:-70262717 | None:intergenic |
| CTATTCAAAGGAAACCTGCG+AGG | 0.678472 | 5.2:+70262285 | MS.gene55150:CDS |
| AGTAGTTCTTGGAACGACAA+CGG | 0.680756 | 5.2:-70262512 | None:intergenic |
| CCCAAGCCCAGATCACAAGA+GGG | 0.683801 | 5.2:-70264074 | None:intergenic |
| GATAACATAGAAGTTGCCAG+TGG | 0.714256 | 5.2:+70261926 | MS.gene55150:CDS |
| TATTCAAAGGAAACCTGCGA+GGG | 0.723688 | 5.2:+70262286 | MS.gene55150:CDS |
| AACAAGCCAAGATCCTTACG+AGG | 0.757784 | 5.2:+70262169 | MS.gene55150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTTTATATTTTATTGA+AGG | - | chr5.2:70263420-70263439 | None:intergenic | 10.0% |
| !! | AGTAATCAAAAATATAATTC+AGG | - | chr5.2:70259768-70259787 | None:intergenic | 15.0% |
| !! | ATAAAATATAAACTATTCAG+AGG | + | chr5.2:70263423-70263442 | MS.gene55150:intron | 15.0% |
| !! | ATATAACACAAAAAAAATTG+TGG | - | chr5.2:70261342-70261361 | None:intergenic | 15.0% |
| !! | GTTTCTTAAATAATACTATT+AGG | + | chr5.2:70265411-70265430 | MS.gene55150:intron | 15.0% |
| !! | TAGAAGAAAAATATTTAGAA+GGG | + | chr5.2:70260728-70260747 | MS.gene55150:intron | 15.0% |
| !! | TTATGTTAGAAATTTCAAAT+CGG | - | chr5.2:70260862-70260881 | None:intergenic | 15.0% |
| !! | TTCAAATTATCATTAAACTT+TGG | - | chr5.2:70264288-70264307 | None:intergenic | 15.0% |
| !! | TTTACATGATATATATTAGA+TGG | - | chr5.2:70263385-70263404 | None:intergenic | 15.0% |
| !! | TTTATTTATCGTAGAATAAT+AGG | - | chr5.2:70260334-70260353 | None:intergenic | 15.0% |
| !!! | TACAAAAATATTGATCTTTT+AGG | + | chr5.2:70262916-70262935 | MS.gene55150:intron | 15.0% |
| !! | AACATAAGAGATATGAAAAA+AGG | - | chr5.2:70262020-70262039 | None:intergenic | 20.0% |
| !! | ACATAAGAGATATGAAAAAA+GGG | - | chr5.2:70262019-70262038 | None:intergenic | 20.0% |
| !! | AGATTCAAATTGACAAAATT+TGG | + | chr5.2:70263526-70263545 | MS.gene55150:intron | 20.0% |
| !! | CAACATTAATATGTTGAAAA+AGG | + | chr5.2:70264498-70264517 | MS.gene55150:intron | 20.0% |
| !! | CCACATAATTTAATATGTTA+TGG | + | chr5.2:70263493-70263512 | MS.gene55150:intron | 20.0% |
| !! | CCATAACATATTAAATTATG+TGG | - | chr5.2:70263496-70263515 | None:intergenic | 20.0% |
| !! | CTAGAAGAAAAATATTTAGA+AGG | + | chr5.2:70260727-70260746 | MS.gene55150:intron | 20.0% |
| !! | CTTGACTATTATATTCAATT+TGG | + | chr5.2:70259622-70259641 | MS.gene55150:intron | 20.0% |
| !! | GATGCATATAATAAACTTTA+GGG | + | chr5.2:70263445-70263464 | MS.gene55150:intron | 20.0% |
| !! | TAAGAAATGAAACAGAAATA+TGG | - | chr5.2:70262359-70262378 | None:intergenic | 20.0% |
| !! | TATTAGGATATTTAATTGAG+TGG | + | chr5.2:70265427-70265446 | MS.gene55150:intron | 20.0% |
| !! | TGAGATAATCTTTATCAATT+TGG | - | chr5.2:70261751-70261770 | None:intergenic | 20.0% |
| !! | TTACACATAAAAAGAAGTAA+AGG | - | chr5.2:70265576-70265595 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTTTAAATCTTGG+TGG | + | chr5.2:70265289-70265308 | MS.gene55150:intron | 20.0% |
| !!! | AAGAAGTTCAAAATTTTCAA+TGG | + | chr5.2:70261000-70261019 | MS.gene55150:intron | 20.0% |
| !!! | AAGATTGGAAATTTTAATTG+AGG | + | chr5.2:70260818-70260837 | MS.gene55150:intron | 20.0% |
| !!! | AGAAATTTTGATGCTTAATT+TGG | + | chr5.2:70263624-70263643 | MS.gene55150:intron | 20.0% |
| !!! | AGATGATTTTTTTAGAGTTT+AGG | + | chr5.2:70259818-70259837 | MS.gene55150:intron | 20.0% |
| !!! | AGATTGGAAATTTTAATTGA+GGG | + | chr5.2:70260819-70260838 | MS.gene55150:intron | 20.0% |
| !!! | ATAATAAATTGCTATGCTTT+TGG | + | chr5.2:70260905-70260924 | MS.gene55150:intron | 20.0% |
| !!! | ATTTAAAAACTTTTTGTGGA+GGG | - | chr5.2:70265284-70265303 | None:intergenic | 20.0% |
| !!! | CAAGATTTAAAAACTTTTTG+TGG | - | chr5.2:70265288-70265307 | None:intergenic | 20.0% |
| !!! | CACAAAAAGTTTTTAAATCT+TGG | + | chr5.2:70265286-70265305 | MS.gene55150:intron | 20.0% |
| !!! | CATTTGTTATAGGATAAATT+TGG | + | chr5.2:70262436-70262455 | MS.gene55150:intron | 20.0% |
| !!! | GAACATCAACAATAATATTT+TGG | - | chr5.2:70263093-70263112 | None:intergenic | 20.0% |
| !!! | TAATAAATTGCTATGCTTTT+GGG | + | chr5.2:70260906-70260925 | MS.gene55150:intron | 20.0% |
| !!! | TATAGTTTATTGTTATTGCT+TGG | + | chr5.2:70264712-70264731 | MS.gene55150:intron | 20.0% |
| !!! | TATTTGAGATGATGAATATT+TGG | + | chr5.2:70261279-70261298 | MS.gene55150:intron | 20.0% |
| !!! | TCTTTTTTATTTTCTACTCA+TGG | + | chr5.2:70262593-70262612 | MS.gene55150:intron | 20.0% |
| !!! | TTAATAATTTCTTTTCACTC+TGG | + | chr5.2:70260021-70260040 | MS.gene55150:intron | 20.0% |
| !!! | TTTTATTTTTCTGTTCATGA+TGG | - | chr5.2:70261810-70261829 | None:intergenic | 20.0% |
| ! | AAAACTTTGATACCTCTATT+GGG | - | chr5.2:70260235-70260254 | None:intergenic | 25.0% |
| ! | AAACTAAATAGAGGAAAGAT+AGG | - | chr5.2:70262201-70262220 | None:intergenic | 25.0% |
| ! | AAATGTATATTCATACATGC+AGG | - | chr5.2:70265472-70265491 | None:intergenic | 25.0% |
| ! | AAGTGTAACTAACAAAAATC+AGG | - | chr5.2:70261677-70261696 | None:intergenic | 25.0% |
| ! | AATAAATCGGATTGCAAATT+GGG | - | chr5.2:70262721-70262740 | None:intergenic | 25.0% |
| ! | ACATAAAAAGAAGTAAAGGA+AGG | - | chr5.2:70265572-70265591 | None:intergenic | 25.0% |
| ! | ACTCATAATTCATGAAAGAA+GGG | + | chr5.2:70261437-70261456 | MS.gene55150:intron | 25.0% |
| ! | ATAAATTTGGAGATGAATAC+AGG | + | chr5.2:70262449-70262468 | MS.gene55150:CDS | 25.0% |
| ! | ATCCTTAAAAATCAAGTGTT+TGG | + | chr5.2:70262128-70262147 | MS.gene55150:CDS | 25.0% |
| ! | ATTATGTGGTTTGAAAAAAC+AGG | - | chr5.2:70263482-70263501 | None:intergenic | 25.0% |
| ! | ATTCCTTCAAGTAAATTTCA+AGG | + | chr5.2:70262866-70262885 | MS.gene55150:intron | 25.0% |
| ! | CAAAATAATAGCTCCAAATT+TGG | + | chr5.2:70264543-70264562 | MS.gene55150:intron | 25.0% |
| ! | CAGACAAAATTTACTTGATT+TGG | - | chr5.2:70260175-70260194 | None:intergenic | 25.0% |
| ! | CATAGCAATTTATTATGCAT+TGG | - | chr5.2:70260901-70260920 | None:intergenic | 25.0% |
| ! | CTAAATTAAATCCTTGAAAC+AGG | + | chr5.2:70261650-70261669 | MS.gene55150:intron | 25.0% |
| ! | GAAAAATGCTCACAATAAAT+CGG | - | chr5.2:70262734-70262753 | None:intergenic | 25.0% |
| ! | GAATAATGTCATCTTTGAAT+CGG | - | chr5.2:70264617-70264636 | None:intergenic | 25.0% |
| ! | GCATATGAAAAACTAAATAG+AGG | - | chr5.2:70262210-70262229 | None:intergenic | 25.0% |
| ! | GGATGCATATAATAAACTTT+AGG | + | chr5.2:70263444-70263463 | MS.gene55150:intron | 25.0% |
| ! | GTACAATAGATGAGAAAATT+AGG | - | chr5.2:70261878-70261897 | None:intergenic | 25.0% |
| ! | GTATGATTTATTCCTATGAA+AGG | - | chr5.2:70263008-70263027 | None:intergenic | 25.0% |
| ! | GTTACAAGGAATAATAAACA+CGG | - | chr5.2:70261180-70261199 | None:intergenic | 25.0% |
| ! | TACTCATAATTCATGAAAGA+AGG | + | chr5.2:70261436-70261455 | MS.gene55150:intron | 25.0% |
| ! | TATCCTTGAAATTTACTTGA+AGG | - | chr5.2:70262872-70262891 | None:intergenic | 25.0% |
| ! | TCAACAAGACATAAAACAAA+AGG | - | chr5.2:70259697-70259716 | None:intergenic | 25.0% |
| ! | TCATACTCTATTATCTCTTA+GGG | + | chr5.2:70262774-70262793 | MS.gene55150:intron | 25.0% |
| ! | TGAAATAACACTCATTAATC+TGG | - | chr5.2:70265032-70265051 | None:intergenic | 25.0% |
| ! | TGATGTAATAAAAATTCCCA+AGG | + | chr5.2:70262094-70262113 | MS.gene55150:CDS | 25.0% |
| ! | TTAGACAAATAACAAAGACA+TGG | - | chr5.2:70261634-70261653 | None:intergenic | 25.0% |
| ! | TTCAATATTTCCTATGTTAG+AGG | + | chr5.2:70261987-70262006 | MS.gene55150:intron | 25.0% |
| ! | TTCATACTCTATTATCTCTT+AGG | + | chr5.2:70262773-70262792 | MS.gene55150:intron | 25.0% |
| ! | TTTCATCTATAAATGGGAAA+GGG | - | chr5.2:70265834-70265853 | None:intergenic | 25.0% |
| ! | TTTCTCATCTATTGTACTTT+GGG | + | chr5.2:70261881-70261900 | MS.gene55150:intron | 25.0% |
| !! | AAATAATGCCACTTATTCAT+TGG | + | chr5.2:70261042-70261061 | MS.gene55150:intron | 25.0% |
| !! | AATAAATTGCTATGCTTTTG+GGG | + | chr5.2:70260907-70260926 | MS.gene55150:intron | 25.0% |
| !! | AGGCTTTATGTTTATTTAAC+AGG | + | chr5.2:70262936-70262955 | MS.gene55150:intron | 25.0% |
| !! | CATATAATAAACTTTAGGGA+TGG | + | chr5.2:70263449-70263468 | MS.gene55150:intron | 25.0% |
| !! | CTTTGTTATCGTAGAATAAT+AGG | - | chr5.2:70260282-70260301 | None:intergenic | 25.0% |
| !! | GATGGAAAAGATTGTAATTT+TGG | - | chr5.2:70261792-70261811 | None:intergenic | 25.0% |
| !! | GATTTAAAAACTTTTTGTGG+AGG | - | chr5.2:70265285-70265304 | None:intergenic | 25.0% |
| !! | TGAGATATTGAATAGTTTGT+TGG | + | chr5.2:70260120-70260139 | MS.gene55150:intron | 25.0% |
| !! | TTTTCTCATCTATTGTACTT+TGG | + | chr5.2:70261880-70261899 | MS.gene55150:intron | 25.0% |
| !!! | AATATTTTTGTACCCAAACA+TGG | - | chr5.2:70262908-70262927 | None:intergenic | 25.0% |
| !!! | AATCTGAATTTGTTAAAGGA+TGG | + | chr5.2:70263129-70263148 | MS.gene55150:CDS | 25.0% |
| !!! | AATTTTGATGCTTAATTTGG+TGG | + | chr5.2:70263627-70263646 | MS.gene55150:intron | 25.0% |
| !!! | AGTATCGATTTTATCTCAAA+TGG | - | chr5.2:70264245-70264264 | None:intergenic | 25.0% |
| !!! | ATCTGCATAACATTTGTTAT+AGG | + | chr5.2:70262426-70262445 | MS.gene55150:intron | 25.0% |
| !!! | ATTAAGCATATTTGTTTCTG+TGG | + | chr5.2:70261480-70261499 | MS.gene55150:intron | 25.0% |
| !!! | TGACAATCTGAATTTGTTAA+AGG | + | chr5.2:70263125-70263144 | MS.gene55150:CDS | 25.0% |
| !!! | TTAGTTTTTCATATGCTCAA+AGG | + | chr5.2:70262214-70262233 | MS.gene55150:intron | 25.0% |
| !!! | TTATTTTGATCTTGACTCTT+AGG | + | chr5.2:70264202-70264221 | MS.gene55150:intron | 25.0% |
| !!! | TTCTAGTTTTATTCACTTGT+AGG | - | chr5.2:70260713-70260732 | None:intergenic | 25.0% |
| AAAAATCTGCACAACAAAGA+AGG | - | chr5.2:70261396-70261415 | None:intergenic | 30.0% | |
| AAAATCTGCACAACAAAGAA+GGG | - | chr5.2:70261395-70261414 | None:intergenic | 30.0% | |
| AAACTCTGTTCTTAAGAGTA+AGG | + | chr5.2:70261842-70261861 | MS.gene55150:intron | 30.0% | |
| AAATGGAGAAACACAATCTT+TGG | + | chr5.2:70259501-70259520 | MS.gene55150:CDS | 30.0% | |
| AAGGAAGGCAATGATATAAA+TGG | - | chr5.2:70265557-70265576 | None:intergenic | 30.0% | |
| AATCTTGGCAAATGTGTATT+GGG | - | chr5.2:70260445-70260464 | None:intergenic | 30.0% | |
| ACTTAACTCCTTCAAAATTG+TGG | + | chr5.2:70262560-70262579 | MS.gene55150:intron | 30.0% | |
| AGAAGGGAAAACTTTGTTAA+GGG | + | chr5.2:70260744-70260763 | MS.gene55150:intron | 30.0% | |
| AGTCAAGAAACCAAGTATAT+GGG | + | chr5.2:70259952-70259971 | MS.gene55150:intron | 30.0% | |
| AGTGATTGTTAAACCAGAAT+TGG | + | chr5.2:70260403-70260422 | MS.gene55150:intron | 30.0% | |
| AGTTATGAGTGCTTATGAAA+AGG | - | chr5.2:70265336-70265355 | None:intergenic | 30.0% | |
| ATAAATCGGATTGCAAATTG+GGG | - | chr5.2:70262720-70262739 | None:intergenic | 30.0% | |
| ATGCTTAATTGCAACTGAAA+AGG | - | chr5.2:70261469-70261488 | None:intergenic | 30.0% | |
| ATTCTACGATAACAAAGTCT+TGG | + | chr5.2:70260285-70260304 | MS.gene55150:intron | 30.0% | |
| CAAAACTTTGATACCTCTAT+TGG | - | chr5.2:70260236-70260255 | None:intergenic | 30.0% | |
| CAAGGGTTTCATCTATAAAT+GGG | - | chr5.2:70265840-70265859 | None:intergenic | 30.0% | |
| CAAGTGAATGAAACCAAATT+TGG | - | chr5.2:70264559-70264578 | None:intergenic | 30.0% | |
| CAATAAATCGGATTGCAAAT+TGG | - | chr5.2:70262722-70262741 | None:intergenic | 30.0% | |
| CATAACTGTAAATGTCCAAT+TGG | + | chr5.2:70265349-70265368 | MS.gene55150:intron | 30.0% | |
| CATACTCTATTATCTCTTAG+GGG | + | chr5.2:70262775-70262794 | MS.gene55150:intron | 30.0% | |
| CTAACTTAAGTCTATTTCAC+AGG | + | chr5.2:70265600-70265619 | MS.gene55150:intron | 30.0% | |
| CTTGTGATCAAAACAGAATA+CGG | + | chr5.2:70261904-70261923 | MS.gene55150:intron | 30.0% | |
| CTTGTTACTGCACTTATTAT+CGG | + | chr5.2:70263165-70263184 | MS.gene55150:CDS | 30.0% | |
| CTTTATGAACATCAAAAGCT+TGG | + | chr5.2:70264689-70264708 | MS.gene55150:intron | 30.0% | |
| GAAAAATGGTGGCTAAAATA+TGG | - | chr5.2:70265132-70265151 | None:intergenic | 30.0% | |
| GATAATAAGTGCAGTAACAA+GGG | - | chr5.2:70263166-70263185 | None:intergenic | 30.0% | |
| GTTAGGAAATGGTAACATAA+TGG | + | chr5.2:70260513-70260532 | MS.gene55150:intron | 30.0% | |
| GTTTCATCTATAAATGGGAA+AGG | - | chr5.2:70265835-70265854 | None:intergenic | 30.0% | |
| TAATGATGTAGCTTTCTACT+GGG | + | chr5.2:70265678-70265697 | MS.gene55150:CDS | 30.0% | |
| TACAAATCAAAATGATGTGC+AGG | + | chr5.2:70259594-70259613 | MS.gene55150:CDS | 30.0% | |
| TAGAAGGGAAAACTTTGTTA+AGG | + | chr5.2:70260743-70260762 | MS.gene55150:intron | 30.0% | |
| TATTAAATGTGATGACTGAG+TGG | - | chr5.2:70264316-70264335 | None:intergenic | 30.0% | |
| TCACATTGATATGTAGAAGA+AGG | + | chr5.2:70259795-70259814 | MS.gene55150:intron | 30.0% | |
| TCCTAACAAATACCATGTTT+GGG | + | chr5.2:70262893-70262912 | MS.gene55150:intron | 30.0% | |
| TGAGATGATGAATATTTGGT+TGG | + | chr5.2:70261283-70261302 | MS.gene55150:intron | 30.0% | |
| TGATTTATTCCTATGAAAGG+TGG | - | chr5.2:70263005-70263024 | None:intergenic | 30.0% | |
| TGCTTAATTGCAACTGAAAA+GGG | - | chr5.2:70261468-70261487 | None:intergenic | 30.0% | |
| TTAATGATGTAGCTTTCTAC+TGG | + | chr5.2:70265677-70265696 | MS.gene55150:CDS | 30.0% | |
| TTAATGTTGTGTGTCTAAAG+AGG | - | chr5.2:70264487-70264506 | None:intergenic | 30.0% | |
| TTGTTACTGCACTTATTATC+GGG | + | chr5.2:70263166-70263185 | MS.gene55150:CDS | 30.0% | |
| TTTAAGCTTGCATTCATTTG+TGG | + | chr5.2:70263904-70263923 | MS.gene55150:intron | 30.0% | |
| TTTGTATGGTAACACAACTT+GGG | + | chr5.2:70260059-70260078 | MS.gene55150:intron | 30.0% | |
| ! | AAAAGTGAAACATGATTTGC+CGG | + | chr5.2:70264353-70264372 | MS.gene55150:intron | 30.0% |
| ! | AACAAAGACATGGACTAATT+AGG | - | chr5.2:70261624-70261643 | None:intergenic | 30.0% |
| ! | ACAAAGACATGGACTAATTA+GGG | - | chr5.2:70261623-70261642 | None:intergenic | 30.0% |
| ! | ACAATGATCCACAATTTTGA+AGG | - | chr5.2:70262571-70262590 | None:intergenic | 30.0% |
| ! | AGAATTTCTTTTGCCATATG+GGG | + | chr5.2:70264153-70264172 | MS.gene55150:CDS | 30.0% |
| ! | AGCCAAACACTTGATTTTTA+AGG | - | chr5.2:70262133-70262152 | None:intergenic | 30.0% |
| ! | CAAGCTTTTGATGTTCATAA+AGG | - | chr5.2:70264691-70264710 | None:intergenic | 30.0% |
| ! | CATATCATAGATGCATTTTG+AGG | + | chr5.2:70263062-70263081 | MS.gene55150:intron | 30.0% |
| ! | CTATGGTTCTATATAGTCTA+TGG | - | chr5.2:70265009-70265028 | None:intergenic | 30.0% |
| ! | CTTTGAATCGGATTCTAAAA+TGG | - | chr5.2:70264605-70264624 | None:intergenic | 30.0% |
| ! | GAGAAAGAAGCACATAAAAA+TGG | + | chr5.2:70259484-70259503 | MS.gene55150:CDS | 30.0% |
| ! | GAGAATTTCTTTTGCCATAT+GGG | + | chr5.2:70264152-70264171 | MS.gene55150:CDS | 30.0% |
| ! | GTTCAAAATTTTCAATGGTG+TGG | + | chr5.2:70261005-70261024 | MS.gene55150:intron | 30.0% |
| ! | GTTCAGAAGTTATTTCAACA+TGG | - | chr5.2:70262401-70262420 | None:intergenic | 30.0% |
| ! | TCAGTTATTTCATCTGATAG+AGG | - | chr5.2:70265742-70265761 | None:intergenic | 30.0% |
| ! | TTTTCTGACGAAAAGAAGAT+TGG | + | chr5.2:70260803-70260822 | MS.gene55150:intron | 30.0% |
| ! | TTTTGAACTTCTTCCAAAGA+TGG | - | chr5.2:70260993-70261012 | None:intergenic | 30.0% |
| !! | GTTTTAGCAAGATTGTTTCT+TGG | + | chr5.2:70264015-70264034 | MS.gene55150:intron | 30.0% |
| !!! | AAGGATTTCGATTTTTTCCT+TGG | - | chr5.2:70262114-70262133 | None:intergenic | 30.0% |
| !!! | AGGATTTCGATTTTTTCCTT+GGG | - | chr5.2:70262113-70262132 | None:intergenic | 30.0% |
| !!! | CAATAGAGGTATCAAAGTTT+TGG | + | chr5.2:70260234-70260253 | MS.gene55150:intron | 30.0% |
| !!! | TGGTATTGGTCAATTTGTTT+TGG | + | chr5.2:70263564-70263583 | MS.gene55150:intron | 30.0% |
| !!! | TTGGAAATTTTAATTGAGGG+TGG | + | chr5.2:70260822-70260841 | MS.gene55150:intron | 30.0% |
| AAAAATCAGGTCCTGTTTCA+AGG | - | chr5.2:70261664-70261683 | None:intergenic | 35.0% | |
| AAAACAAGAGTGAGAGACAA+AGG | - | chr5.2:70265238-70265257 | None:intergenic | 35.0% | |
| AAACAAGAGTGAGAGACAAA+GGG | - | chr5.2:70265237-70265256 | None:intergenic | 35.0% | |
| AACACTCATTAATCTGGCTA+TGG | - | chr5.2:70265026-70265045 | None:intergenic | 35.0% | |
| AACTGTAAATGTCCAATTGG+AGG | + | chr5.2:70265352-70265371 | MS.gene55150:intron | 35.0% | |
| AATATAATCACCTTCACACC+TGG | - | chr5.2:70261962-70261981 | None:intergenic | 35.0% | |
| AATTCTGTTCCACCTTTCAT+AGG | + | chr5.2:70262993-70263012 | MS.gene55150:intron | 35.0% | |
| ACCCAAACATGGTATTTGTT+AGG | - | chr5.2:70262897-70262916 | None:intergenic | 35.0% | |
| AGTAGGGTATACGAATCTTT+GGG | + | chr5.2:70261205-70261224 | MS.gene55150:intron | 35.0% | |
| AGTATAGATACTTTCGCTGT+AGG | - | chr5.2:70259985-70260004 | None:intergenic | 35.0% | |
| AGTTGCTCATAACCTTGTTA+GGG | - | chr5.2:70264453-70264472 | None:intergenic | 35.0% | |
| ATACACATTTGCCAAGATTG+AGG | + | chr5.2:70260446-70260465 | MS.gene55150:intron | 35.0% | |
| ATCTCAAATGGAACAACCAT+TGG | - | chr5.2:70264233-70264252 | None:intergenic | 35.0% | |
| ATCTTGGCAAATGTGTATTG+GGG | - | chr5.2:70260444-70260463 | None:intergenic | 35.0% | |
| ATTACATCATCCAGTTGTTG+AGG | - | chr5.2:70262083-70262102 | None:intergenic | 35.0% | |
| ATTCCTTGTAACTCTTGAGT+AGG | + | chr5.2:70261188-70261207 | MS.gene55150:intron | 35.0% | |
| CAATCTTGGCAAATGTGTAT+TGG | - | chr5.2:70260446-70260465 | None:intergenic | 35.0% | |
| CATTTAATCCAAACAGCTCT+CGG | + | chr5.2:70264816-70264835 | MS.gene55150:intron | 35.0% | |
| CGATAATAAGTGCAGTAACA+AGG | - | chr5.2:70263167-70263186 | None:intergenic | 35.0% | |
| CTCGAGAGGATAAAAGAATT+TGG | - | chr5.2:70265385-70265404 | None:intergenic | 35.0% | |
| CTGATATTCTTCTTGCAAAG+AGG | + | chr5.2:70265706-70265725 | MS.gene55150:CDS | 35.0% | |
| CTTAATTGCAACTGAAAAGG+GGG | - | chr5.2:70261466-70261485 | None:intergenic | 35.0% | |
| CTTTACAGCCAATGAATAAG+TGG | - | chr5.2:70261053-70261072 | None:intergenic | 35.0% | |
| GAGTATGAAGTGACAAGAAA+AGG | - | chr5.2:70262762-70262781 | None:intergenic | 35.0% | |
| GAGTCAAGAAACCAAGTATA+TGG | + | chr5.2:70259951-70259970 | MS.gene55150:intron | 35.0% | |
| GATCCTATTCGTATGTCTTT+CGG | - | chr5.2:70264392-70264411 | None:intergenic | 35.0% | |
| GCAAGGGTTTCATCTATAAA+TGG | - | chr5.2:70265841-70265860 | None:intergenic | 35.0% | |
| GCAAGGTGTATAGTACATAA+GGG | + | chr5.2:70260681-70260700 | MS.gene55150:intron | 35.0% | |
| GCTTAATTGCAACTGAAAAG+GGG | - | chr5.2:70261467-70261486 | None:intergenic | 35.0% | |
| GTCCTAACAAATACCATGTT+TGG | + | chr5.2:70262892-70262911 | MS.gene55150:intron | 35.0% | |
| GTTTGTATGGTAACACAACT+TGG | + | chr5.2:70260058-70260077 | MS.gene55150:intron | 35.0% | |
| TAAAGACTAATGGCGTGTTT+GGG | + | chr5.2:70260482-70260501 | MS.gene55150:intron | 35.0% | |
| TAGGACAACTTAAGGAAAAG+AGG | + | chr5.2:70265157-70265176 | MS.gene55150:intron | 35.0% | |
| TCACATGACCCTTTATATAG+TGG | - | chr5.2:70261087-70261106 | None:intergenic | 35.0% | |
| TCACTTGAGTAGAAGTTTGA+TGG | + | chr5.2:70260644-70260663 | MS.gene55150:intron | 35.0% | |
| TCATCTGATAGAGGAGAAAT+TGG | - | chr5.2:70265733-70265752 | None:intergenic | 35.0% | |
| TCTATAAATGGGAAAGGGTA+TGG | - | chr5.2:70265829-70265848 | None:intergenic | 35.0% | |
| TCTGCTCTACAATTTCTTTG+TGG | + | chr5.2:70260191-70260210 | MS.gene55150:intron | 35.0% | |
| TCTGGTTGTAAAGTAGTTCT+TGG | - | chr5.2:70262526-70262545 | None:intergenic | 35.0% | |
| TGACAACTCTCAAACAAATG+TGG | + | chr5.2:70260359-70260378 | MS.gene55150:intron | 35.0% | |
| TGCAAGGTGTATAGTACATA+AGG | + | chr5.2:70260680-70260699 | MS.gene55150:intron | 35.0% | |
| TGGTTTCATTCACTTGAGTA+TGG | + | chr5.2:70264563-70264582 | MS.gene55150:intron | 35.0% | |
| TGTTAAACCAGAATTGGTGA+TGG | + | chr5.2:70260409-70260428 | MS.gene55150:intron | 35.0% | |
| TGTTACTGCACTTATTATCG+GGG | + | chr5.2:70263167-70263186 | MS.gene55150:CDS | 35.0% | |
| TTCCTTGTAACTCTTGAGTA+GGG | + | chr5.2:70261189-70261208 | MS.gene55150:intron | 35.0% | |
| TTCTGATACTCATCCATCTT+TGG | + | chr5.2:70260977-70260996 | MS.gene55150:intron | 35.0% | |
| TTGATCTTGACTCTTAGGTT+TGG | + | chr5.2:70264207-70264226 | MS.gene55150:intron | 35.0% | |
| TTGTATGGTAACACAACTTG+GGG | + | chr5.2:70260060-70260079 | MS.gene55150:intron | 35.0% | |
| TTTCGGTCCAAAAAAGAAAC+CGG | - | chr5.2:70264375-70264394 | None:intergenic | 35.0% | |
| ! | AAGCTTAACTCCAAGGTTTT+GGG | - | chr5.2:70263220-70263239 | None:intergenic | 35.0% |
| ! | ACCACATGACAATGTTTTGT+AGG | - | chr5.2:70262812-70262831 | None:intergenic | 35.0% |
| ! | CCACATGACAATGTTTTGTA+GGG | - | chr5.2:70262811-70262830 | None:intergenic | 35.0% |
| ! | GGAATAACAGTTTTGCTCTT+AGG | + | chr5.2:70265787-70265806 | MS.gene55150:CDS | 35.0% |
| ! | GGAGAATTTCTTTTGCCATA+TGG | + | chr5.2:70264151-70264170 | MS.gene55150:CDS | 35.0% |
| ! | GTTAAACCAGAATTGGTGAT+GGG | + | chr5.2:70260410-70260429 | MS.gene55150:intron | 35.0% |
| ! | TGGTTCTATATAGTCTATGG+CGG | - | chr5.2:70265006-70265025 | None:intergenic | 35.0% |
| !! | AAACACGCCATTAGTCTTTA+CGG | - | chr5.2:70260482-70260501 | None:intergenic | 35.0% |
| !! | ACAAGAGGGTTGATAGAAAT+TGG | - | chr5.2:70264063-70264082 | None:intergenic | 35.0% |
| !! | GACATGTACGATTTTGGTAT+TGG | + | chr5.2:70263550-70263569 | MS.gene55150:intron | 35.0% |
| !! | GGTAACATAATGGATGTTGA+AGG | + | chr5.2:70260523-70260542 | MS.gene55150:intron | 35.0% |
| !! | TGAATCGGATTCTAAAATGG+TGG | - | chr5.2:70264602-70264621 | None:intergenic | 35.0% |
| !! | TTTGGTGACATGTACGATTT+TGG | + | chr5.2:70263544-70263563 | MS.gene55150:intron | 35.0% |
| !!! | AAAACCTTATTTTTCGCTGC+AGG | - | chr5.2:70265057-70265076 | None:intergenic | 35.0% |
| !!! | ATTTCTTTTCACTCTGGAGT+TGG | + | chr5.2:70260027-70260046 | MS.gene55150:intron | 35.0% |
| !!! | GCTCTTTTGGTTCAATTACA+AGG | + | chr5.2:70263657-70263676 | MS.gene55150:CDS | 35.0% |
| !!! | TGATTTGCCGGTTTCTTTTT+TGG | + | chr5.2:70264365-70264384 | MS.gene55150:intron | 35.0% |
| !!! | TTTCTTTTCACTCTGGAGTT+GGG | + | chr5.2:70260028-70260047 | MS.gene55150:intron | 35.0% |
| AAAGACTAATGGCGTGTTTG+GGG | + | chr5.2:70260483-70260502 | MS.gene55150:intron | 40.0% | |
| AACAAGACCCAATGCAAATC+CGG | - | chr5.2:70263744-70263763 | None:intergenic | 40.0% | |
| AACAAGAGTGAGAGACAAAG+GGG | - | chr5.2:70265236-70265255 | None:intergenic | 40.0% | |
| AAGGTTATGAGCAACTCCAT+TGG | + | chr5.2:70264457-70264476 | MS.gene55150:intron | 40.0% | |
| AAGTAAGTACGAGTTGTCTC+TGG | - | chr5.2:70262544-70262563 | None:intergenic | 40.0% | |
| AATCAAGCAAGGAGAACACT+TGG | - | chr5.2:70265183-70265202 | None:intergenic | 40.0% | |
| ACAACCCGCCACTATATAAA+GGG | + | chr5.2:70261076-70261095 | MS.gene55150:intron | 40.0% | |
| AGAGCAACATACTTGTCATC+AGG | - | chr5.2:70265766-70265785 | None:intergenic | 40.0% | |
| AGGCTGTTAGGGACATATAA+AGG | - | chr5.2:70262063-70262082 | None:intergenic | 40.0% | |
| AGGTTATGAGCAACTCCATT+GGG | + | chr5.2:70264458-70264477 | MS.gene55150:intron | 40.0% | |
| AGTAGTTCTTGGAACGACAA+CGG | - | chr5.2:70262515-70262534 | None:intergenic | 40.0% | |
| ATAGATACTTTCGCTGTAGG+TGG | - | chr5.2:70259982-70260001 | None:intergenic | 40.0% | |
| ATGACCCTTTATATAGTGGC+GGG | - | chr5.2:70261083-70261102 | None:intergenic | 40.0% | |
| ATTATCGGGGTACATGAACT+TGG | + | chr5.2:70263180-70263199 | MS.gene55150:CDS | 40.0% | |
| ATTTGGTTGGACTGTTTCCA+TGG | + | chr5.2:70261296-70261315 | MS.gene55150:intron | 40.0% | |
| CAAAACCTTGGAGTTAAGCT+TGG | + | chr5.2:70263219-70263238 | MS.gene55150:CDS | 40.0% | |
| CAAACCTGCAGCGAAAAATA+AGG | + | chr5.2:70265050-70265069 | MS.gene55150:intron | 40.0% | |
| CAGATTGTCAACAGTTGATC+TGG | - | chr5.2:70263115-70263134 | None:intergenic | 40.0% | |
| CATACAACCTGTCTTTACTC+TGG | + | chr5.2:70263023-70263042 | MS.gene55150:intron | 40.0% | |
| CATGACCCTTTATATAGTGG+CGG | - | chr5.2:70261084-70261103 | None:intergenic | 40.0% | |
| CATGCAGGTACATAATCAAG+AGG | - | chr5.2:70265457-70265476 | None:intergenic | 40.0% | |
| CCCTACAAAACATTGTCATG+TGG | + | chr5.2:70262808-70262827 | MS.gene55150:intron | 40.0% | |
| CTCAATGTGAAACTGAAACC+AGG | - | chr5.2:70261560-70261579 | None:intergenic | 40.0% | |
| CTGGTTTCAGTTTCACATTG+AGG | + | chr5.2:70261558-70261577 | MS.gene55150:intron | 40.0% | |
| GAGTAGGGTATACGAATCTT+TGG | + | chr5.2:70261204-70261223 | MS.gene55150:intron | 40.0% | |
| GAGTTGCTCATAACCTTGTT+AGG | - | chr5.2:70264454-70264473 | None:intergenic | 40.0% | |
| GATAACATAGAAGTTGCCAG+TGG | + | chr5.2:70261926-70261945 | MS.gene55150:CDS | 40.0% | |
| GATGACAAGTATGTTGCTCT+CGG | + | chr5.2:70265766-70265785 | MS.gene55150:CDS | 40.0% | |
| GCAGCTATTTATTGTGTCCA+TGG | - | chr5.2:70260153-70260172 | None:intergenic | 40.0% | |
| GTAAAGACTAATGGCGTGTT+TGG | + | chr5.2:70260481-70260500 | MS.gene55150:intron | 40.0% | |
| GTAGGGTATACGAATCTTTG+GGG | + | chr5.2:70261206-70261225 | MS.gene55150:intron | 40.0% | |
| GTCCACTTCTTCATTGTTGA+AGG | + | chr5.2:70259867-70259886 | MS.gene55150:intron | 40.0% | |
| GTCCTTCAACAATGAAGAAG+TGG | - | chr5.2:70259872-70259891 | None:intergenic | 40.0% | |
| GTGTATAGTACATAAGGGCT+TGG | + | chr5.2:70260686-70260705 | MS.gene55150:intron | 40.0% | |
| GTGTCGAATATCCTCAATCT+TGG | - | chr5.2:70260460-70260479 | None:intergenic | 40.0% | |
| GTTCATAAAGGTGAAGCCTT+GGG | - | chr5.2:70264679-70264698 | None:intergenic | 40.0% | |
| GTTGTCCTAGAAGCGAAAAA+TGG | - | chr5.2:70265146-70265165 | None:intergenic | 40.0% | |
| TAAGAAACTAGCAACTCGAG+AGG | - | chr5.2:70265399-70265418 | None:intergenic | 40.0% | |
| TACACCTTGCAAACCTACTT+TGG | - | chr5.2:70260671-70260690 | None:intergenic | 40.0% | |
| TACCCTACTCAAGAGTTACA+AGG | - | chr5.2:70261194-70261213 | None:intergenic | 40.0% | |
| TAGGTCTTGGTATATGCATC+TGG | - | chr5.2:70264758-70264777 | None:intergenic | 40.0% | |
| TAGTCAACCAGAGTAAAGAC+AGG | - | chr5.2:70263033-70263052 | None:intergenic | 40.0% | |
| TATCAACCCTCTTGTGATCT+GGG | + | chr5.2:70264068-70264087 | MS.gene55150:CDS | 40.0% | |
| TATTCAAAGGAAACCTGCGA+GGG | + | chr5.2:70262286-70262305 | MS.gene55150:CDS | 40.0% | |
| TGAGTGTCCTTATGTCTGTA+CGG | - | chr5.2:70265212-70265231 | None:intergenic | 40.0% | |
| TGGAGAAACACAATCTTTGG+AGG | + | chr5.2:70259504-70259523 | MS.gene55150:CDS | 40.0% | |
| TGTAAATGTCCAATTGGAGG+AGG | + | chr5.2:70265355-70265374 | MS.gene55150:intron | 40.0% | |
| TGTTCATAAAGGTGAAGCCT+TGG | - | chr5.2:70264680-70264699 | None:intergenic | 40.0% | |
| TTCGACACCGTAAAGACTAA+TGG | + | chr5.2:70260472-70260491 | MS.gene55150:intron | 40.0% | |
| TTGCTTGATGAAAATGCTCC+TGG | + | chr5.2:70261539-70261558 | MS.gene55150:intron | 40.0% | |
| TTTAGCTGTTCTGCATCTAC+AGG | - | chr5.2:70259556-70259575 | None:intergenic | 40.0% | |
| TTTCCTTCTAGTCAATCCTG+AGG | + | chr5.2:70262474-70262493 | MS.gene55150:CDS | 40.0% | |
| ! | AAGGTGCCACCAAGATTTAA+AGG | - | chr5.2:70265298-70265317 | None:intergenic | 40.0% |
| ! | AGCTGTATTGCTGTCAGTTT+TGG | + | chr5.2:70265087-70265106 | MS.gene55150:intron | 40.0% |
| ! | ATATGCATCTGGAATGAGCA+TGG | - | chr5.2:70264747-70264766 | None:intergenic | 40.0% |
| ! | ATATGGCTTGCAGAATACCT+CGG | - | chr5.2:70265115-70265134 | None:intergenic | 40.0% |
| ! | CAAGCTTAACTCCAAGGTTT+TGG | - | chr5.2:70263221-70263240 | None:intergenic | 40.0% |
| ! | GAAGTTTGATGGTCCAAAGT+AGG | + | chr5.2:70260655-70260674 | MS.gene55150:intron | 40.0% |
| ! | TGCTTAATTTGGTGGCAGAT+AGG | + | chr5.2:70263635-70263654 | MS.gene55150:intron | 40.0% |
| ! | TTGGTGGCACCTTTAAATCT+TGG | + | chr5.2:70265305-70265324 | MS.gene55150:intron | 40.0% |
| ! | TTTTGCCATATGGGGAAGAA+AGG | + | chr5.2:70264161-70264180 | MS.gene55150:CDS | 40.0% |
| !! | AGGTCTTGTTGCATGAAGAT+TGG | + | chr5.2:70262234-70262253 | MS.gene55150:intron | 40.0% |
| !! | AGTTTGTTGGAGTGTTTCCA+TGG | + | chr5.2:70260133-70260152 | MS.gene55150:intron | 40.0% |
| !! | ATCGGATTCTAAAATGGTGG+TGG | - | chr5.2:70264599-70264618 | None:intergenic | 40.0% |
| !! | CCAAAAGCGCTATTGCTTAT+GGG | + | chr5.2:70259724-70259743 | MS.gene55150:intron | 40.0% |
| !! | GATTCTAAAATGGTGGTGGA+TGG | - | chr5.2:70264595-70264614 | None:intergenic | 40.0% |
| !! | GGATTTTCGATTGTGTTGCT+TGG | + | chr5.2:70265640-70265659 | MS.gene55150:CDS | 40.0% |
| !! | GGGGATTTCAAGTTAGGAAA+TGG | + | chr5.2:70260502-70260521 | MS.gene55150:intron | 40.0% |
| !! | GGTCTTGTTGCATGAAGATT+GGG | + | chr5.2:70262235-70262254 | MS.gene55150:intron | 40.0% |
| !! | GTGTTTGGGGATTTCAAGTT+AGG | + | chr5.2:70260496-70260515 | MS.gene55150:intron | 40.0% |
| !! | GTTTCTTGGTAACGTTCTCA+AGG | + | chr5.2:70264029-70264048 | MS.gene55150:CDS | 40.0% |
| !! | TACTGTTGATGGCATTGATG+AGG | - | chr5.2:70264107-70264126 | None:intergenic | 40.0% |
| !! | TCCAAAAGCGCTATTGCTTA+TGG | + | chr5.2:70259723-70259742 | MS.gene55150:intron | 40.0% |
| !! | TTCGCTTCTAGGACAACTTA+AGG | + | chr5.2:70265149-70265168 | MS.gene55150:intron | 40.0% |
| !! | TTTCACGAGTCATTTCTAGC+TGG | + | chr5.2:70263830-70263849 | MS.gene55150:CDS | 40.0% |
| !! | TTTCTAGTTGCCCAAAACCT+TGG | + | chr5.2:70263207-70263226 | MS.gene55150:CDS | 40.0% |
| !!! | CTTTTTTAGCTGTACCTGAG+TGG | + | chr5.2:70262638-70262657 | MS.gene55150:intron | 40.0% |
| AACAAGCCAAGATCCTTACG+AGG | + | chr5.2:70262169-70262188 | MS.gene55150:CDS | 45.0% | |
| ACAACACCAATACCGTCACT+TGG | - | chr5.2:70263794-70263813 | None:intergenic | 45.0% | |
| ACATATGAACTGCAGCATCG+TGG | - | chr5.2:70260573-70260592 | None:intergenic | 45.0% | |
| ACCAATTGCCGGATTTGCAT+TGG | + | chr5.2:70263733-70263752 | MS.gene55150:CDS | 45.0% | |
| AGCAAACGGCTGCTGTAATT+TGG | - | chr5.2:70264848-70264867 | None:intergenic | 45.0% | |
| AGGGAGAATGCCTCTAACAT+AGG | - | chr5.2:70262000-70262019 | None:intergenic | 45.0% | |
| AGGTGGATCACCCATATACT+TGG | - | chr5.2:70259965-70259984 | None:intergenic | 45.0% | |
| ATACCTCCAAGTGACGGTAT+TGG | + | chr5.2:70263785-70263804 | MS.gene55150:CDS | 45.0% | |
| ATCCAGTTGTTGAGGCTGTT+AGG | - | chr5.2:70262075-70262094 | None:intergenic | 45.0% | |
| ATTCCCGCTGGAGAAATTGA+TGG | + | chr5.2:70264126-70264145 | MS.gene55150:CDS | 45.0% | |
| CACAACCCGCCACTATATAA+AGG | + | chr5.2:70261075-70261094 | MS.gene55150:intron | 45.0% | |
| CATCCTCAGGATTGACTAGA+AGG | - | chr5.2:70262480-70262499 | None:intergenic | 45.0% | |
| CCAATTGCCGGATTTGCATT+GGG | + | chr5.2:70263734-70263753 | MS.gene55150:CDS | 45.0% | |
| CGATACCTTTCTTCCCCATA+TGG | - | chr5.2:70264169-70264188 | None:intergenic | 45.0% | |
| CTATCAACCCTCTTGTGATC+TGG | + | chr5.2:70264067-70264086 | MS.gene55150:CDS | 45.0% | |
| CTATTCAAAGGAAACCTGCG+AGG | + | chr5.2:70262285-70262304 | MS.gene55150:CDS | 45.0% | |
| GAGAAATGAGCATGTGTGAG+CGG | + | chr5.2:70261126-70261145 | MS.gene55150:intron | 45.0% | |
| GGACCGAAAGACATACGAAT+AGG | + | chr5.2:70264386-70264405 | MS.gene55150:intron | 45.0% | |
| GGAGTCGAATGCTATGCTTT+GGG | - | chr5.2:70264985-70265004 | None:intergenic | 45.0% | |
| GGTGACAGTAGATTTGACAC+AGG | - | chr5.2:70264876-70264895 | None:intergenic | 45.0% | |
| GTAGAACCCATCACCAATTC+TGG | - | chr5.2:70260419-70260438 | None:intergenic | 45.0% | |
| GTCCTAGAAGCGAAAAATGG+TGG | - | chr5.2:70265143-70265162 | None:intergenic | 45.0% | |
| GTCTTTGGCATGCAATGATC+TGG | - | chr5.2:70264657-70264676 | None:intergenic | 45.0% | |
| GTGGCACCTTTAAATCTTGG+TGG | + | chr5.2:70265308-70265327 | MS.gene55150:intron | 45.0% | |
| GTTGGGCACTCAAGTTTGTA+TGG | + | chr5.2:70260045-70260064 | MS.gene55150:intron | 45.0% | |
| TACGGTTTGCGAATCAAGCA+AGG | - | chr5.2:70265194-70265213 | None:intergenic | 45.0% | |
| TATCATACAACCTGCCAGCT+AGG | - | chr5.2:70263261-70263280 | None:intergenic | 45.0% | |
| TATGGTAACACAACTTGGGG+TGG | + | chr5.2:70260063-70260082 | MS.gene55150:intron | 45.0% | |
| TCCACCCTAGCAGAAAAATC+AGG | - | chr5.2:70262262-70262281 | None:intergenic | 45.0% | |
| TCCAGTTGTTGAGGCTGTTA+GGG | - | chr5.2:70262074-70262093 | None:intergenic | 45.0% | |
| TCGCAAACCGTACAGACATA+AGG | + | chr5.2:70265202-70265221 | MS.gene55150:intron | 45.0% | |
| TCTCTCCAAAGAGACGATGT+TGG | - | chr5.2:70260619-70260638 | None:intergenic | 45.0% | |
| TGACTCTTAGGTTTGGCCAA+TGG | + | chr5.2:70264214-70264233 | MS.gene55150:intron | 45.0% | |
| TGATGCCAACATCGTCTCTT+TGG | + | chr5.2:70260611-70260630 | MS.gene55150:intron | 45.0% | |
| TGCCAGCTAGGAACAAAGTA+CGG | - | chr5.2:70263249-70263268 | None:intergenic | 45.0% | |
| TGCTCATAACCTTGTTAGGG+CGG | - | chr5.2:70264450-70264469 | None:intergenic | 45.0% | |
| TGGTCCAAAGTAGGTTTGCA+AGG | + | chr5.2:70260664-70260683 | MS.gene55150:intron | 45.0% | |
| TGTCTAAAGAGGCAACCCAA+TGG | - | chr5.2:70264476-70264495 | None:intergenic | 45.0% | |
| TGTGTGAGCGGTCATGTATT+AGG | + | chr5.2:70261138-70261157 | MS.gene55150:intron | 45.0% | |
| TTAGCTGTACCTGAGTGGTT+TGG | + | chr5.2:70262643-70262662 | MS.gene55150:intron | 45.0% | |
| TTCATATGTCCCAGGATGCA+AGG | + | chr5.2:70260584-70260603 | MS.gene55150:intron | 45.0% | |
| TTGCGTGTGTTTCCCAATAG+AGG | + | chr5.2:70260220-70260239 | MS.gene55150:intron | 45.0% | |
| TTGTTAAAGGATGGCCTACC+TGG | + | chr5.2:70263138-70263157 | MS.gene55150:CDS | 45.0% | |
| TTTGGAAAGCCTCCTCCAAT+TGG | - | chr5.2:70265367-70265386 | None:intergenic | 45.0% | |
| ! | ACACCCCACAACTCTAAAGA+AGG | + | chr5.2:70259890-70259909 | MS.gene55150:intron | 45.0% |
| ! | CACCCCACAACTCTAAAGAA+GGG | + | chr5.2:70259891-70259910 | MS.gene55150:intron | 45.0% |
| ! | CCCATAAGCAATAGCGCTTT+TGG | - | chr5.2:70259727-70259746 | None:intergenic | 45.0% |
| ! | GGGTCCTGATTTTTCTGCTA+GGG | + | chr5.2:70262255-70262274 | MS.gene55150:intron | 45.0% |
| ! | GTTGCGTTTTCTCAGTACAC+AGG | - | chr5.2:70264786-70264805 | None:intergenic | 45.0% |
| ! | TAGGGTGGAGTGCTATTCAA+AGG | + | chr5.2:70262273-70262292 | MS.gene55150:intron | 45.0% |
| ! | TCCTGATTTTTCTGCTAGGG+TGG | + | chr5.2:70262258-70262277 | MS.gene55150:intron | 45.0% |
| ! | TGGGTCCTGATTTTTCTGCT+AGG | + | chr5.2:70262254-70262273 | MS.gene55150:intron | 45.0% |
| !! | AGAGCCCTTCTTTAGAGTTG+TGG | - | chr5.2:70259898-70259917 | None:intergenic | 45.0% |
| !! | AGCCACCATTTTTCGCTTCT+AGG | + | chr5.2:70265138-70265157 | MS.gene55150:intron | 45.0% |
| !! | AGCCCTTCTTTAGAGTTGTG+GGG | - | chr5.2:70259896-70259915 | None:intergenic | 45.0% |
| !! | CTTGGTAACGTTCTCAAGGA+AGG | + | chr5.2:70264033-70264052 | MS.gene55150:CDS | 45.0% |
| !! | GAGCCCTTCTTTAGAGTTGT+GGG | - | chr5.2:70259897-70259916 | None:intergenic | 45.0% |
| !! | GGTCTTGTTCTTCTGCTTCT+AGG | + | chr5.2:70263755-70263774 | MS.gene55150:CDS | 45.0% |
| !! | TATGCTTTGGGAGTCCATTC+AGG | - | chr5.2:70264973-70264992 | None:intergenic | 45.0% |
| !! | TTTTAGAAGCTTTCCCTCGC+AGG | - | chr5.2:70262302-70262321 | None:intergenic | 45.0% |
| AAGGTGAAGCCTTGGGTCTT+TGG | - | chr5.2:70264672-70264691 | None:intergenic | 50.0% | |
| ACACCAATACCGTCACTTGG+AGG | - | chr5.2:70263791-70263810 | None:intergenic | 50.0% | |
| ACGGCTAGAACAACTGCACA+CGG | - | chr5.2:70264897-70264916 | None:intergenic | 50.0% | |
| AGACTTGGCAAGCTGGAACA+CGG | - | chr5.2:70264916-70264935 | None:intergenic | 50.0% | |
| AGATAGGCACACACCTCGTA+AGG | - | chr5.2:70262185-70262204 | None:intergenic | 50.0% | |
| AGCTGTTCTGCATCTACAGG+TGG | - | chr5.2:70259553-70259572 | None:intergenic | 50.0% | |
| CACACACCTCGTAAGGATCT+TGG | - | chr5.2:70262178-70262197 | None:intergenic | 50.0% | |
| CAGGCTTCAATTCGCTTCAC+AGG | + | chr5.2:70265619-70265638 | MS.gene55150:intron | 50.0% | |
| CATCAGCAACCTTGCATCCT+GGG | - | chr5.2:70260596-70260615 | None:intergenic | 50.0% | |
| CATTGCATGCCAAAGACCCA+AGG | + | chr5.2:70264660-70264679 | MS.gene55150:intron | 50.0% | |
| CCCAATGCAAATCCGGCAAT+TGG | - | chr5.2:70263737-70263756 | None:intergenic | 50.0% | |
| CCCTCCATCAATTTCTCCAG+CGG | - | chr5.2:70264133-70264152 | None:intergenic | 50.0% | |
| CCGCTGGAGAAATTGATGGA+GGG | + | chr5.2:70264130-70264149 | MS.gene55150:CDS | 50.0% | |
| CCTCCATCAATTTCTCCAGC+GGG | - | chr5.2:70264132-70264151 | None:intergenic | 50.0% | |
| CGGAGTCGAATGCTATGCTT+TGG | - | chr5.2:70264986-70265005 | None:intergenic | 50.0% | |
| GCCAGCTAGGAACAAAGTAC+GGG | - | chr5.2:70263248-70263267 | None:intergenic | 50.0% | |
| GGACTCCAAGCTTAACTCCA+AGG | - | chr5.2:70263227-70263246 | None:intergenic | 50.0% | |
| GTACTTTGTTCCTAGCTGGC+AGG | + | chr5.2:70263248-70263267 | MS.gene55150:CDS | 50.0% | |
| GTTCTGCATCTACAGGTGGA+GGG | - | chr5.2:70259549-70259568 | None:intergenic | 50.0% | |
| TCCAGCGGGAATACTGTTGA+TGG | - | chr5.2:70264118-70264137 | None:intergenic | 50.0% | |
| TCCCGTACTTTGTTCCTAGC+TGG | + | chr5.2:70263244-70263263 | MS.gene55150:CDS | 50.0% | |
| TCCCTAACAGCCTCAACAAC+TGG | + | chr5.2:70262070-70262089 | MS.gene55150:intron | 50.0% | |
| TCCTGAGGATGATAAGCCAG+TGG | + | chr5.2:70262489-70262508 | MS.gene55150:CDS | 50.0% | |
| TGACACAGGCAGACAGCAAA+CGG | - | chr5.2:70264862-70264881 | None:intergenic | 50.0% | |
| TGCTGCAGTTCATATGTCCC+AGG | + | chr5.2:70260576-70260595 | MS.gene55150:intron | 50.0% | |
| TGGACTGTTTCCATGGACGT+GGG | + | chr5.2:70261303-70261322 | MS.gene55150:intron | 50.0% | |
| TGTTCTGCATCTACAGGTGG+AGG | - | chr5.2:70259550-70259569 | None:intergenic | 50.0% | |
| TTGCTCAAGATTGCAGCTGC+TGG | + | chr5.2:70263710-70263729 | MS.gene55150:CDS | 50.0% | |
| TTGGACTGTTTCCATGGACG+TGG | + | chr5.2:70261302-70261321 | MS.gene55150:intron | 50.0% | |
| ! | GACACTTTTACCCACGTCCA+TGG | - | chr5.2:70261316-70261335 | None:intergenic | 50.0% |
| ! | GCGTTTTCTCAGTACACAGG+AGG | - | chr5.2:70264783-70264802 | None:intergenic | 50.0% |
| ! | GGAGAAGCCAGACCAGATTT+TGG | - | chr5.2:70264952-70264971 | None:intergenic | 50.0% |
| ! | GGGTATACGAATCTTTGGGG+TGG | + | chr5.2:70261209-70261228 | MS.gene55150:intron | 50.0% |
| ! | GGTGGTACACATAGTGGAGA+GGG | + | chr5.2:70261227-70261246 | MS.gene55150:intron | 50.0% |
| ! | TACACAGGAGGCATAGGTCT+TGG | - | chr5.2:70264771-70264790 | None:intergenic | 50.0% |
| ! | TCTCAGTACACAGGAGGCAT+AGG | - | chr5.2:70264777-70264796 | None:intergenic | 50.0% |
| ! | TGGAGGGTTACTTTGCTCAG+AGG | - | chr5.2:70259533-70259552 | None:intergenic | 50.0% |
| ! | TGGTGGCAGATAGGCTCTTT+TGG | + | chr5.2:70263644-70263663 | MS.gene55150:intron | 50.0% |
| !! | CACGAGTCATTTCTAGCTGG+CGG | + | chr5.2:70263833-70263852 | MS.gene55150:CDS | 50.0% |
| !! | CTTTGGGGTGGTACACATAG+TGG | + | chr5.2:70261221-70261240 | MS.gene55150:intron | 50.0% |
| !! | TCATTTCTAGCTGGCGGCAT+TGG | + | chr5.2:70263839-70263858 | MS.gene55150:CDS | 50.0% |
| !!! | TGCTGTCAGTTTTGGTTCCG+AGG | + | chr5.2:70265095-70265114 | MS.gene55150:intron | 50.0% |
| !!! | TGGTTTGGTGCTGCGTCTTT+TGG | + | chr5.2:70262658-70262677 | MS.gene55150:CDS | 50.0% |
| ACCCTCTTGTGATCTGGGCT+TGG | + | chr5.2:70264073-70264092 | MS.gene55150:CDS | 55.0% | |
| AGTGCAGTAACAAGGGCTCC+AGG | - | chr5.2:70263159-70263178 | None:intergenic | 55.0% | |
| ATCACCTCTGCCAGGTGTGA+AGG | + | chr5.2:70261949-70261968 | MS.gene55150:CDS | 55.0% | |
| ATCACCTTCACACCTGGCAG+AGG | - | chr5.2:70261956-70261975 | None:intergenic | 55.0% | |
| CAGTAACAAGGGCTCCAGGT+AGG | - | chr5.2:70263155-70263174 | None:intergenic | 55.0% | |
| CCAGCTTGCCAAGTCTGCTT+GGG | + | chr5.2:70264920-70264939 | MS.gene55150:intron | 55.0% | |
| CCCAAGCCCAGATCACAAGA+GGG | - | chr5.2:70264077-70264096 | None:intergenic | 55.0% | |
| CCCGCTGGAGAAATTGATGG+AGG | + | chr5.2:70264129-70264148 | MS.gene55150:CDS | 55.0% | |
| CCCTCTTGTGATCTGGGCTT+GGG | + | chr5.2:70264074-70264093 | MS.gene55150:CDS | 55.0% | |
| CTTGGGCTCGTGCCAAAATC+TGG | + | chr5.2:70264937-70264956 | MS.gene55150:intron | 55.0% | |
| GCATCAGCAACCTTGCATCC+TGG | - | chr5.2:70260597-70260616 | None:intergenic | 55.0% | |
| GCCATCAACAGTATTCCCGC+TGG | + | chr5.2:70264114-70264133 | MS.gene55150:CDS | 55.0% | |
| GCTCGTGCCAAAATCTGGTC+TGG | + | chr5.2:70264942-70264961 | MS.gene55150:intron | 55.0% | |
| GGGGACATTGCGAAGCAGTA+AGG | - | chr5.2:70262701-70262720 | None:intergenic | 55.0% | |
| TCCAGCTTGCCAAGTCTGCT+TGG | + | chr5.2:70264919-70264938 | MS.gene55150:intron | 55.0% | |
| ! | CTGGTCTGGCTTCTCCTGAA+TGG | + | chr5.2:70264956-70264975 | MS.gene55150:intron | 55.0% |
| ! | GGGTGGTACACATAGTGGAG+AGG | + | chr5.2:70261226-70261245 | MS.gene55150:intron | 55.0% |
| !! | GCCACTGGCTTATCATCCTC+AGG | - | chr5.2:70262493-70262512 | None:intergenic | 55.0% |
| ACCTGGCAGAGGTGATCCAC+TGG | - | chr5.2:70261945-70261964 | None:intergenic | 60.0% | |
| CCCAAGCAGACTTGGCAAGC+TGG | - | chr5.2:70264923-70264942 | None:intergenic | 60.0% | |
| CTTGGAACGACAACGGCCAC+TGG | - | chr5.2:70262508-70262527 | None:intergenic | 60.0% | |
| CTTGTGATCTGGGCTTGGGC+AGG | + | chr5.2:70264078-70264097 | MS.gene55150:CDS | 60.0% | |
| GACGCAGCACCAAACCACTC+AGG | - | chr5.2:70262655-70262674 | None:intergenic | 60.0% | |
| GCAGCTGCTGGACCAATTGC+CGG | + | chr5.2:70263722-70263741 | MS.gene55150:CDS | 60.0% | |
| GCCCAAGCCCAGATCACAAG+AGG | - | chr5.2:70264078-70264097 | None:intergenic | 60.0% | |
| GGCAGAAGCCGAGAGCTGTT+TGG | - | chr5.2:70264827-70264846 | None:intergenic | 60.0% | |
| GTGATGCAGCCGCCCTAACA+AGG | + | chr5.2:70264438-70264457 | MS.gene55150:intron | 60.0% | |
| GCCAGTGGATCACCTCTGCC+AGG | + | chr5.2:70261941-70261960 | MS.gene55150:CDS | 65.0% | |
| GGCACGAGCCCAAGCAGACT+TGG | - | chr5.2:70264931-70264950 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 70259484 | 70265870 | 70259484 | ID=MS.gene55150 |
| chr5.2 | mRNA | 70259484 | 70265870 | 70259484 | ID=MS.gene55150.t1;Parent=MS.gene55150 |
| chr5.2 | exon | 70259484 | 70259615 | 70259484 | ID=MS.gene55150.t1.exon1;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70259484 | 70259615 | 70259484 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70261920 | 70261970 | 70261920 | ID=MS.gene55150.t1.exon2;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70261920 | 70261970 | 70261920 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70262080 | 70262190 | 70262080 | ID=MS.gene55150.t1.exon3;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70262080 | 70262190 | 70262080 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70262276 | 70262350 | 70262276 | ID=MS.gene55150.t1.exon4;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70262276 | 70262350 | 70262276 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70262448 | 70262553 | 70262448 | ID=MS.gene55150.t1.exon5;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70262448 | 70262553 | 70262448 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70262647 | 70262740 | 70262647 | ID=MS.gene55150.t1.exon6;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70262647 | 70262740 | 70262647 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70263116 | 70263269 | 70263116 | ID=MS.gene55150.t1.exon7;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70263116 | 70263269 | 70263116 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70263653 | 70263860 | 70263653 | ID=MS.gene55150.t1.exon8;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70263653 | 70263860 | 70263653 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70264022 | 70264182 | 70264022 | ID=MS.gene55150.t1.exon9;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70264022 | 70264182 | 70264022 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| chr5.2 | exon | 70265622 | 70265870 | 70265622 | ID=MS.gene55150.t1.exon10;Parent=MS.gene55150.t1 |
| chr5.2 | CDS | 70265622 | 70265870 | 70265622 | ID=cds.MS.gene55150.t1;Parent=MS.gene55150.t1 |
| Gene Sequence |
| Protein sequence |
