Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60265.t1 | XP_003588718.1 | 100 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 1.60E-55 | 225.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60265.t1 | F4JWS8 | 75.2 | 121 | 30 | 0 | 1 | 121 | 1 | 121 | 1.0e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60265.t1 | B7FGY5 | 100.0 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 1.2e-55 | 225.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene60265 | 0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene049166 | MS.gene60265 | 0.812223 | 4.72E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene60265 | 0.803216 | 3.87E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene60265 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene60265 | 0.805562 | 1.26E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene60265 | 0.854424 | 1.24E-61 | -1.69E-46 |
| MS.gene050288 | MS.gene60265 | 0.827954 | 1.18E-54 | -1.69E-46 |
| MS.gene050317 | MS.gene60265 | 0.836177 | 1.09E-56 | -1.69E-46 |
| MS.gene050320 | MS.gene60265 | 0.847411 | 1.18E-59 | -1.69E-46 |
| MS.gene050439 | MS.gene60265 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene60265 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene60265 | 0.810938 | 8.99E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene60265 | 0.800479 | 1.41E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene60265 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene051063 | MS.gene60265 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene60265 | 0.823519 | 1.33E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene60265 | 0.80185 | 7.41E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene60265 | 0.826543 | 2.56E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene60265 | 0.851895 | 6.59E-61 | -1.69E-46 |
| MS.gene051756 | MS.gene60265 | 0.868178 | 7.92E-66 | -1.69E-46 |
| MS.gene051757 | MS.gene60265 | 0.844302 | 8.22E-59 | -1.69E-46 |
| MS.gene051903 | MS.gene60265 | 0.864793 | 9.41E-65 | -1.69E-46 |
| MS.gene051975 | MS.gene60265 | 0.802709 | 4.93E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene60265 | 0.822258 | 2.61E-53 | -1.69E-46 |
| MS.gene053109 | MS.gene60265 | 0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene60265 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene60265 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene60265 | 0.833837 | 4.24E-56 | -1.69E-46 |
| MS.gene055311 | MS.gene60265 | 0.801054 | 1.08E-48 | -1.69E-46 |
| MS.gene055441 | MS.gene60265 | 0.802909 | 4.49E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene60265 | 0.827254 | 1.73E-54 | -1.69E-46 |
| MS.gene056631 | MS.gene60265 | 0.824173 | 9.32E-54 | -1.69E-46 |
| MS.gene056638 | MS.gene60265 | 0.804782 | 1.83E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene60265 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene60265 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene056830 | MS.gene60265 | -0.804481 | 2.12E-49 | -1.69E-46 |
| MS.gene056975 | MS.gene60265 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene60265 | 0.832638 | 8.43E-56 | -1.69E-46 |
| MS.gene056992 | MS.gene60265 | 0.810721 | 1.00E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene60265 | 0.840426 | 8.76E-58 | -1.69E-46 |
| MS.gene057234 | MS.gene60265 | 0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene60265 | -0.822157 | 2.75E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene60265 | 0.855919 | 4.57E-62 | -1.69E-46 |
| MS.gene058084 | MS.gene60265 | 0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene60265 | 0.82324 | 1.54E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene60265 | 0.854499 | 1.18E-61 | -1.69E-46 |
| MS.gene058654 | MS.gene60265 | 0.809542 | 1.80E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene60265 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene60265 | 0.853099 | 2.99E-61 | -1.69E-46 |
| MS.gene059360 | MS.gene60265 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene059830 | MS.gene60265 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene60265 | 0.838412 | 2.92E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene60265 | 0.850839 | 1.31E-60 | -1.69E-46 |
| MS.gene060297 | MS.gene60265 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene60265 | 0.805995 | 1.02E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene60265 | 0.849047 | 4.16E-60 | -1.69E-46 |
| MS.gene060870 | MS.gene60265 | 0.810805 | 9.60E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015970 | MS.gene60265 | PPI |
| MS.gene61682 | MS.gene60265 | PPI |
| MS.gene51557 | MS.gene60265 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60265.t1 | MTR_1g011880 | 100.000 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 1.35e-79 | 232 |
| MS.gene60265.t1 | MTR_1g011880 | 100.000 | 101 | 0 | 0 | 1 | 101 | 1 | 101 | 8.91e-72 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60265.t1 | AT5G25450 | 75.207 | 121 | 30 | 0 | 1 | 121 | 1 | 121 | 2.32e-63 | 191 |
| MS.gene60265.t1 | AT4G32470 | 76.786 | 112 | 26 | 0 | 1 | 112 | 1 | 112 | 1.69e-60 | 184 |
| MS.gene60265.t1 | AT4G32470 | 77.000 | 100 | 23 | 0 | 1 | 100 | 1 | 100 | 3.09e-54 | 167 |
| MS.gene60265.t1 | AT5G25450 | 64.463 | 121 | 27 | 1 | 1 | 121 | 1 | 105 | 2.75e-48 | 152 |
| MS.gene60265.t1 | AT5G25450 | 75.294 | 85 | 21 | 0 | 1 | 85 | 1 | 85 | 1.04e-43 | 140 |
Find 40 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTAGCTTCTATAGATT+TGG | 0.270022 | 1.1:+8813740 | None:intergenic |
| GTATTACGATTTGGATATTA+AGG | 0.274133 | 1.1:-8817867 | MS.gene60265:CDS |
| AAACAAGACAGTGATTAATA+AGG | 0.287731 | 1.1:-8813784 | MS.gene60265:CDS |
| ACCGTATTTGCGAAGACGTT+TGG | 0.293147 | 1.1:+8818003 | None:intergenic |
| GTATCTTCCTGAGGATCTTC+AGG | 0.339636 | 1.1:-8817759 | MS.gene60265:intron |
| GTATGATCCGTATTACGATT+TGG | 0.362212 | 1.1:-8817876 | MS.gene60265:CDS |
| TCCAAACGTCTTCGCAAATA+CGG | 0.376472 | 1.1:-8818004 | MS.gene60265:intron |
| AACAAGACAGTGATTAATAA+GGG | 0.409817 | 1.1:-8813783 | MS.gene60265:CDS |
| CGAGCATCAACAACCTCCTT+TGG | 0.426514 | 1.1:+8817827 | None:intergenic |
| ACCACAGGGTTACGAGCAGC+AGG | 0.439743 | 1.1:-8813723 | MS.gene60265:CDS |
| CAGAGAGATTCGAGGATTAA+CGG | 0.446710 | 1.1:-8813671 | None:intergenic |
| CGAGCAGAGCGTGAAGCATT+GGG | 0.452428 | 1.1:-8814561 | MS.gene60265:CDS |
| ACGAGCAGAGCGTGAAGCAT+TGG | 0.467463 | 1.1:-8814562 | MS.gene60265:CDS |
| AGGAAGATACTCATGCTTCA+TGG | 0.469418 | 1.1:+8817772 | None:intergenic |
| TTAATATCCAAATCGTAATA+CGG | 0.475035 | 1.1:+8817869 | None:intergenic |
| AGGCAATGCAAACACCATTC+AGG | 0.479539 | 1.1:-8816664 | MS.gene60265:CDS |
| TTAAAGAAGGGAAGTATAAG+TGG | 0.492175 | 1.1:-8813822 | MS.gene60265:CDS |
| TGAAGTGAGGATCTTAAAGA+AGG | 0.499292 | 1.1:-8813835 | MS.gene60265:intron |
| ACCATTCAGGAGCTACCTTC+AGG | 0.525111 | 1.1:-8816651 | MS.gene60265:CDS |
| TCCTGAAGGTAGCTCCTGAA+TGG | 0.529425 | 1.1:+8816650 | None:intergenic |
| GGCTTTGAATCGGCTTCCAA+AGG | 0.532273 | 1.1:-8817843 | MS.gene60265:CDS |
| ATATTAAGGAGGCTTTGAAT+CGG | 0.539685 | 1.1:-8817853 | MS.gene60265:CDS |
| AAACCAACCTGAAGATCCTC+AGG | 0.545207 | 1.1:+8817752 | None:intergenic |
| CGAATCTCTCTGTTAACCGT+AGG | 0.547789 | 1.1:+8813682 | None:intergenic |
| ATGCCACCATTGCTGCCCTA+CGG | 0.556597 | 1.1:-8813698 | MS.gene60265:CDS |
| TTTGAATCGGCTTCCAAAGG+AGG | 0.563776 | 1.1:-8817840 | MS.gene60265:CDS |
| TGTTAACCGTAGGGCAGCAA+TGG | 0.575960 | 1.1:+8813692 | None:intergenic |
| AAATCTATAGAAGCTACCAC+AGG | 0.576803 | 1.1:-8813738 | MS.gene60265:CDS |
| TAACCGTAGGGCAGCAATGG+TGG | 0.583879 | 1.1:+8813695 | None:intergenic |
| TTACGATTTGGATATTAAGG+AGG | 0.584001 | 1.1:-8817864 | MS.gene60265:CDS |
| GAATCTCTCTGTTAACCGTA+GGG | 0.592093 | 1.1:+8813683 | None:intergenic |
| GAAGTGAGGATCTTAAAGAA+GGG | 0.602165 | 1.1:-8813834 | MS.gene60265:intron |
| ACGGTTAACAGAGAGATTCG+AGG | 0.609160 | 1.1:-8813679 | MS.gene60265:CDS |
| TAAGGGCAACATATTCTCGT+CGG | 0.612643 | 1.1:-8813766 | MS.gene60265:CDS |
| CAAAGGTCAGCATATCCTGA+AGG | 0.627878 | 1.1:+8816636 | None:intergenic |
| GCAGAGCGTGAAGCATTGGG+AGG | 0.668632 | 1.1:-8814558 | MS.gene60265:intron |
| CCCTGCTGCTCGTAACCCTG+TGG | 0.673021 | 1.1:+8813722 | None:intergenic |
| GAAGCATGAGTATCTTCCTG+AGG | 0.684541 | 1.1:-8817768 | MS.gene60265:CDS |
| AATCTATAGAAGCTACCACA+GGG | 0.688978 | 1.1:-8813737 | MS.gene60265:CDS |
| CCACAGGGTTACGAGCAGCA+GGG | 0.702097 | 1.1:-8813722 | MS.gene60265:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATGTTTAATAAAAAA+AGG | + | chr1.1:8815269-8815288 | None:intergenic | 10.0% |
| !!! | TCTTATTTTAATTTAAACTA+GGG | - | chr1.1:8814659-8814678 | MS.gene60265:intron | 10.0% |
| !!! | TTCTTATTTTAATTTAAACT+AGG | - | chr1.1:8814658-8814677 | MS.gene60265:intron | 10.0% |
| !! | AAATACAATTTCACAAATTA+GGG | + | chr1.1:8813820-8813839 | None:intergenic | 15.0% |
| !! | ATTTAACATGTTAACTAATA+GGG | - | chr1.1:8816542-8816561 | MS.gene60265:intron | 15.0% |
| !! | TATTTAACATGTTAACTAAT+AGG | - | chr1.1:8816541-8816560 | MS.gene60265:intron | 15.0% |
| !!! | AATACAAAATTGAATGTTTT+TGG | - | chr1.1:8814037-8814056 | MS.gene60265:intron | 15.0% |
| !!! | CAATATTTTTGTAATTCATT+GGG | - | chr1.1:8815771-8815790 | MS.gene60265:intron | 15.0% |
| !!! | GAAATGATTTTATAATTGTT+TGG | + | chr1.1:8816659-8816678 | None:intergenic | 15.0% |
| !!! | TATACAAATCTTTGAAAATA+AGG | + | chr1.1:8815663-8815682 | None:intergenic | 15.0% |
| !!! | TGTTTTGATATAACATTATA+TGG | - | chr1.1:8815218-8815237 | MS.gene60265:intron | 15.0% |
| !!! | TTATTTTCAAAGATTTGTAT+AGG | - | chr1.1:8815662-8815681 | MS.gene60265:intron | 15.0% |
| !! | AAAAAACGAAATGAAGATTT+AGG | + | chr1.1:8813785-8813804 | None:intergenic | 20.0% |
| !! | ATAAAATCTAACAAGTAAGA+TGG | + | chr1.1:8816805-8816824 | None:intergenic | 20.0% |
| !! | ATCCTGTAAAATAAAATTTG+TGG | - | chr1.1:8817728-8817747 | MS.gene60265:intron | 20.0% |
| !! | CAAATACAATTTCACAAATT+AGG | + | chr1.1:8813821-8813840 | None:intergenic | 20.0% |
| !! | GATAAGATTGAAGTATATTT+GGG | + | chr1.1:8815353-8815372 | None:intergenic | 20.0% |
| !! | TAAAATCTAACAAGTAAGAT+GGG | + | chr1.1:8816804-8816823 | None:intergenic | 20.0% |
| !! | TCAAATGAAGAAGAAAAAAA+AGG | - | chr1.1:8815748-8815767 | MS.gene60265:intron | 20.0% |
| !! | TCCTGTAAAATAAAATTTGT+GGG | - | chr1.1:8817729-8817748 | MS.gene60265:intron | 20.0% |
| !! | TTAATATCCAAATCGTAATA+CGG | + | chr1.1:8813884-8813903 | None:intergenic | 20.0% |
| !! | TTAGTAGGTAAAATTTATCT+GGG | + | chr1.1:8816927-8816946 | None:intergenic | 20.0% |
| !! | TTTATTTCATTTCACATTTG+AGG | - | chr1.1:8814513-8814532 | MS.gene60265:intron | 20.0% |
| !!! | AATGTGGAATATTATTTTAC+AGG | - | chr1.1:8817631-8817650 | MS.gene60265:intron | 20.0% |
| !!! | GCAATATTTTTGTAATTCAT+TGG | - | chr1.1:8815770-8815789 | MS.gene60265:intron | 20.0% |
| !!! | GTATTTGATTTGTGAAATTA+GGG | - | chr1.1:8813834-8813853 | MS.gene60265:intron | 20.0% |
| !!! | TCATTTGATTACTATTTTCA+AGG | + | chr1.1:8815736-8815755 | None:intergenic | 20.0% |
| !!! | TGTATTTGATTTGTGAAATT+AGG | - | chr1.1:8813833-8813852 | MS.gene60265:CDS | 20.0% |
| !!! | TTAGATTTTATTTTGATGAG+TGG | - | chr1.1:8816814-8816833 | MS.gene60265:intron | 20.0% |
| ! | AAAAAAATGTGGTCCATATA+AGG | + | chr1.1:8817357-8817376 | None:intergenic | 25.0% |
| ! | AAAATGGAACAAAAACAACA+AGG | + | chr1.1:8816698-8816717 | None:intergenic | 25.0% |
| ! | AAACAAGACAGTGATTAATA+AGG | - | chr1.1:8817966-8817985 | MS.gene60265:intron | 25.0% |
| ! | AAATTTATTGAAAGTCCTTG+TGG | - | chr1.1:8814374-8814393 | MS.gene60265:intron | 25.0% |
| ! | AACAAGACAGTGATTAATAA+GGG | - | chr1.1:8817967-8817986 | MS.gene60265:intron | 25.0% |
| ! | AATAGAATCAAAAAACGAGA+TGG | - | chr1.1:8814437-8814456 | MS.gene60265:intron | 25.0% |
| ! | AATGATTCCAATAAAGACAA+TGG | + | chr1.1:8817473-8817492 | None:intergenic | 25.0% |
| ! | ACACATTCTCATTTATTGTT+TGG | + | chr1.1:8814791-8814810 | None:intergenic | 25.0% |
| ! | ACTGTCAAACATATAAAACA+AGG | + | chr1.1:8815146-8815165 | None:intergenic | 25.0% |
| ! | AGACTTACCAAAATAAAAGA+TGG | - | chr1.1:8817547-8817566 | MS.gene60265:intron | 25.0% |
| ! | AGCAAATATGAACTAACAAA+AGG | + | chr1.1:8815526-8815545 | None:intergenic | 25.0% |
| ! | ATAGAATCAAAAAACGAGAT+GGG | - | chr1.1:8814438-8814457 | MS.gene60265:intron | 25.0% |
| ! | ATGATTCCAATAAAGACAAT+GGG | + | chr1.1:8817472-8817491 | None:intergenic | 25.0% |
| ! | ATGCAAGCCATAAATTATAA+AGG | + | chr1.1:8817439-8817458 | None:intergenic | 25.0% |
| ! | CAAATATAGTAGCATAATTG+AGG | - | chr1.1:8815433-8815452 | MS.gene60265:intron | 25.0% |
| ! | CAATCTAAGCAATGTATTTA+AGG | + | chr1.1:8815375-8815394 | None:intergenic | 25.0% |
| ! | CTTAGTAGGTAAAATTTATC+TGG | + | chr1.1:8816928-8816947 | None:intergenic | 25.0% |
| ! | GAAATAAAATGCATTTCACA+AGG | + | chr1.1:8814501-8814520 | None:intergenic | 25.0% |
| ! | GAAGATCTAAATATCTTGTT+TGG | - | chr1.1:8814974-8814993 | MS.gene60265:intron | 25.0% |
| ! | GGATAAGATTGAAGTATATT+TGG | + | chr1.1:8815354-8815373 | None:intergenic | 25.0% |
| ! | TATTGGAATCATTTCTTGTT+TGG | - | chr1.1:8817480-8817499 | MS.gene60265:intron | 25.0% |
| ! | TCAAAGATTTGTATAGGAAA+AGG | - | chr1.1:8815668-8815687 | MS.gene60265:intron | 25.0% |
| ! | TGTAAAATAAAATTTGTGGG+TGG | - | chr1.1:8817732-8817751 | MS.gene60265:intron | 25.0% |
| ! | TTAGTTGAATAGAAAATGAG+AGG | + | chr1.1:8816593-8816612 | None:intergenic | 25.0% |
| ! | TTTCTATTCAACTAAATGAG+AGG | - | chr1.1:8816598-8816617 | MS.gene60265:intron | 25.0% |
| !! | ATTTTACCCATTGTCTTTAT+TGG | - | chr1.1:8817463-8817482 | MS.gene60265:intron | 25.0% |
| !! | GATATATACTTGTTGAGTTT+AGG | + | chr1.1:8817887-8817906 | None:intergenic | 25.0% |
| !! | GTAAAATTTGAAGGGTTTTT+GGG | + | chr1.1:8815892-8815911 | None:intergenic | 25.0% |
| !! | GTATTACGATTTGGATATTA+AGG | - | chr1.1:8813883-8813902 | MS.gene60265:intron | 25.0% |
| !! | TAAATATCTTGTTTGGTATG+TGG | - | chr1.1:8814981-8815000 | MS.gene60265:intron | 25.0% |
| !! | TATTGCTATTACACTTAGTT+TGG | + | chr1.1:8816730-8816749 | None:intergenic | 25.0% |
| !! | TGCTACTATATTTGTTGAAA+TGG | + | chr1.1:8815427-8815446 | None:intergenic | 25.0% |
| !! | TGTGTTTGTATTGATAGAAA+TGG | - | chr1.1:8814127-8814146 | MS.gene60265:intron | 25.0% |
| !!! | AATCACTCCATCTTTTATTT+TGG | + | chr1.1:8817557-8817576 | None:intergenic | 25.0% |
| !!! | ACCCACAAATTTTATTTTAC+AGG | + | chr1.1:8817733-8817752 | None:intergenic | 25.0% |
| !!! | GGATAGTTTTACAATAAAAG+TGG | + | chr1.1:8814770-8814789 | None:intergenic | 25.0% |
| !!! | GTAGCAAAAAGTGTTATTTT+TGG | - | chr1.1:8817091-8817110 | MS.gene60265:intron | 25.0% |
| !!! | TTATATGGACCACATTTTTT+TGG | - | chr1.1:8817356-8817375 | MS.gene60265:intron | 25.0% |
| AAAAAGGCAATCAAGAAGTA+TGG | + | chr1.1:8815253-8815272 | None:intergenic | 30.0% | |
| AAAATAAGAAAAACTCCCAG+AGG | + | chr1.1:8814648-8814667 | None:intergenic | 30.0% | |
| AAAATGTCGTGATTGCAATT+TGG | - | chr1.1:8817761-8817780 | MS.gene60265:CDS | 30.0% | |
| AAAGTGAAACTTCTAGACTA+GGG | + | chr1.1:8815915-8815934 | None:intergenic | 30.0% | |
| AAATTGGTTGAAAACTGTTG+TGG | - | chr1.1:8814103-8814122 | MS.gene60265:intron | 30.0% | |
| AATAGATAAACACATCCACA+AGG | + | chr1.1:8814392-8814411 | None:intergenic | 30.0% | |
| AATTCAGAAGCAATAGCTTA+AGG | + | chr1.1:8816329-8816348 | None:intergenic | 30.0% | |
| AATTGGTTGAAAACTGTTGT+GGG | - | chr1.1:8814104-8814123 | MS.gene60265:intron | 30.0% | |
| ACATAGTTTCTGATGCATAT+GGG | - | chr1.1:8816117-8816136 | MS.gene60265:intron | 30.0% | |
| AGTAACTAATTGTGTGATTG+TGG | - | chr1.1:8815188-8815207 | MS.gene60265:intron | 30.0% | |
| ATCCCTTCACAAATTTCTTA+TGG | + | chr1.1:8816432-8816451 | None:intergenic | 30.0% | |
| ATGTACTCTACTATTGTGTT+TGG | - | chr1.1:8817298-8817317 | MS.gene60265:intron | 30.0% | |
| CAAGTAAACGGTATTAAACA+TGG | - | chr1.1:8815859-8815878 | MS.gene60265:intron | 30.0% | |
| CACCATAAGAAATTTGTGAA+GGG | - | chr1.1:8816427-8816446 | MS.gene60265:intron | 30.0% | |
| CATAAATTATAAAGGCAAGC+AGG | + | chr1.1:8817431-8817450 | None:intergenic | 30.0% | |
| CATCACATATAGCAGTTATA+GGG | + | chr1.1:8817128-8817147 | None:intergenic | 30.0% | |
| CTAGATGAAGCTTGATAAAT+TGG | - | chr1.1:8814087-8814106 | MS.gene60265:intron | 30.0% | |
| CTGCTTGCCTTTATAATTTA+TGG | - | chr1.1:8817429-8817448 | MS.gene60265:intron | 30.0% | |
| GCTTAGATTGTTAGAAATCT+TGG | - | chr1.1:8815385-8815404 | MS.gene60265:intron | 30.0% | |
| GGAAATAGAAGAAAAGAAAG+TGG | + | chr1.1:8816213-8816232 | None:intergenic | 30.0% | |
| GTAACTAATTGTGTGATTGT+GGG | - | chr1.1:8815189-8815208 | MS.gene60265:intron | 30.0% | |
| TAAAGTGAAACTTCTAGACT+AGG | + | chr1.1:8815916-8815935 | None:intergenic | 30.0% | |
| TACATAGTTTCTGATGCATA+TGG | - | chr1.1:8816116-8816135 | MS.gene60265:intron | 30.0% | |
| TAGAAAAAACACCTAGATCA+AGG | + | chr1.1:8816260-8816279 | None:intergenic | 30.0% | |
| TCATTGAATGGAATTCATGT+GGG | - | chr1.1:8816879-8816898 | MS.gene60265:intron | 30.0% | |
| TGGATGTGTTTATCTATTGA+CGG | - | chr1.1:8814394-8814413 | MS.gene60265:intron | 30.0% | |
| TGTTTATCTATTGACGGAAA+TGG | - | chr1.1:8814400-8814419 | MS.gene60265:intron | 30.0% | |
| TTAACAGGGTATATGACTAA+TGG | - | chr1.1:8815815-8815834 | MS.gene60265:intron | 30.0% | |
| TTAATACCGTTTACTTGTGT+GGG | + | chr1.1:8815856-8815875 | None:intergenic | 30.0% | |
| TTATTAGAAAATGCCCAAGA+GGG | + | chr1.1:8817394-8817413 | None:intergenic | 30.0% | |
| TTCATTGAATGGAATTCATG+TGG | - | chr1.1:8816878-8816897 | MS.gene60265:intron | 30.0% | |
| TTGGATGCAGTTTAGATTTA+GGG | - | chr1.1:8816183-8816202 | MS.gene60265:intron | 30.0% | |
| TTGTAGATCCAAAGAAAAAC+TGG | - | chr1.1:8813696-8813715 | MS.gene60265:CDS | 30.0% | |
| TTTAATACCGTTTACTTGTG+TGG | + | chr1.1:8815857-8815876 | None:intergenic | 30.0% | |
| TTTACAGCACCAAAAAAATG+TGG | + | chr1.1:8817368-8817387 | None:intergenic | 30.0% | |
| TTTATTAGAAAATGCCCAAG+AGG | + | chr1.1:8817395-8817414 | None:intergenic | 30.0% | |
| ! | AGCTTTGATGAATCCTTATA+TGG | - | chr1.1:8817341-8817360 | MS.gene60265:intron | 30.0% |
| ! | ATAAAACAAGGCACTTACAA+AGG | + | chr1.1:8815134-8815153 | None:intergenic | 30.0% |
| ! | CTTGGGCATTTTCTAATAAA+TGG | - | chr1.1:8817395-8817414 | MS.gene60265:intron | 30.0% |
| ! | GATTTTCTGTGAACATACTT+TGG | - | chr1.1:8814914-8814933 | MS.gene60265:intron | 30.0% |
| ! | GGTAAAATTTGAAGGGTTTT+TGG | + | chr1.1:8815893-8815912 | None:intergenic | 30.0% |
| ! | TCATTTTGCTTTCTCCAATT+TGG | - | chr1.1:8814701-8814720 | MS.gene60265:intron | 30.0% |
| ! | TCCAATTTGGAGGTATAAAA+AGG | - | chr1.1:8814714-8814733 | MS.gene60265:intron | 30.0% |
| ! | TCCTTTTTATACCTCCAAAT+TGG | + | chr1.1:8814718-8814737 | None:intergenic | 30.0% |
| ! | TTAAAGAAGGGAAGTATAAG+TGG | - | chr1.1:8817928-8817947 | MS.gene60265:intron | 30.0% |
| ! | TTACGATTTGGATATTAAGG+AGG | - | chr1.1:8813886-8813905 | MS.gene60265:intron | 30.0% |
| ! | TTCATATTTGCTAGAGTAGA+TGG | - | chr1.1:8815534-8815553 | MS.gene60265:intron | 30.0% |
| ! | TTTAGTAGAACTTTTGCACA+TGG | - | chr1.1:8816157-8816176 | MS.gene60265:intron | 30.0% |
| !! | ATATTAAGGAGGCTTTGAAT+CGG | - | chr1.1:8813897-8813916 | MS.gene60265:intron | 30.0% |
| !! | TTTGGTTGATGATGAAATCT+TGG | - | chr1.1:8817316-8817335 | MS.gene60265:intron | 30.0% |
| !!! | CACTGATTTTATATTCGAAG+GGG | + | chr1.1:8817858-8817877 | None:intergenic | 30.0% |
| !!! | GAAGCTATTTTGATTGGAAT+TGG | - | chr1.1:8817267-8817286 | MS.gene60265:intron | 30.0% |
| !!! | GCACTGATTTTATATTCGAA+GGG | + | chr1.1:8817859-8817878 | None:intergenic | 30.0% |
| !!! | TGCACTGATTTTATATTCGA+AGG | + | chr1.1:8817860-8817879 | None:intergenic | 30.0% |
| AAAGAGTGAGTGCTAAAAAG+AGG | + | chr1.1:8816860-8816879 | None:intergenic | 35.0% | |
| AAAGATGGAGTGATTGTTCA+AGG | - | chr1.1:8817562-8817581 | MS.gene60265:intron | 35.0% | |
| AAATCTATAGAAGCTACCAC+AGG | - | chr1.1:8818012-8818031 | MS.gene60265:CDS | 35.0% | |
| AAGACAATCAAGACAAGCAA+AGG | + | chr1.1:8815327-8815346 | None:intergenic | 35.0% | |
| AAGAGTGAGTGCTAAAAAGA+GGG | + | chr1.1:8816859-8816878 | None:intergenic | 35.0% | |
| AAGTGAAACTTCTAGACTAG+GGG | + | chr1.1:8815914-8815933 | None:intergenic | 35.0% | |
| AATAGCTTAAGGTCTTCAAC+TGG | + | chr1.1:8816318-8816337 | None:intergenic | 35.0% | |
| AATCTATAGAAGCTACCACA+GGG | - | chr1.1:8818013-8818032 | MS.gene60265:CDS | 35.0% | |
| ACATATAGATGGGTCTTAAC+AGG | - | chr1.1:8815800-8815819 | MS.gene60265:intron | 35.0% | |
| AGACTAGGGGTAAAATTTGA+AGG | + | chr1.1:8815901-8815920 | None:intergenic | 35.0% | |
| ATAGCTTAAGGTCTTCAACT+GGG | + | chr1.1:8816317-8816336 | None:intergenic | 35.0% | |
| ATATCTTCTCAACTGAAGTG+AGG | - | chr1.1:8817902-8817921 | MS.gene60265:intron | 35.0% | |
| ATCAAGGATACACACATAGA+TGG | + | chr1.1:8816244-8816263 | None:intergenic | 35.0% | |
| ATGATTGCTATGTCTTTAGC+AGG | + | chr1.1:8815948-8815967 | None:intergenic | 35.0% | |
| CATATAGATGGGTCTTAACA+GGG | - | chr1.1:8815801-8815820 | MS.gene60265:intron | 35.0% | |
| CATTGAATGGAATTCATGTG+GGG | - | chr1.1:8816880-8816899 | MS.gene60265:intron | 35.0% | |
| CCACCATAAGAAATTTGTGA+AGG | - | chr1.1:8816426-8816445 | MS.gene60265:intron | 35.0% | |
| CCTGTCAAAAACAGATACAA+AGG | + | chr1.1:8815069-8815088 | None:intergenic | 35.0% | |
| CCTTCACAAATTTCTTATGG+TGG | + | chr1.1:8816429-8816448 | None:intergenic | 35.0% | |
| CTATTTCATTGTACTGTCAC+TGG | - | chr1.1:8814814-8814833 | MS.gene60265:intron | 35.0% | |
| GAAAACAGAAATACAGACAC+AGG | + | chr1.1:8815592-8815611 | None:intergenic | 35.0% | |
| GAAGGGGATATATATGTGTA+GGG | + | chr1.1:8817842-8817861 | None:intergenic | 35.0% | |
| GAAGTGAGGATCTTAAAGAA+GGG | - | chr1.1:8817916-8817935 | MS.gene60265:intron | 35.0% | |
| GACACATAATTCTACCATAG+TGG | + | chr1.1:8816392-8816411 | None:intergenic | 35.0% | |
| GACTAGGGGTAAAATTTGAA+GGG | + | chr1.1:8815900-8815919 | None:intergenic | 35.0% | |
| GCATCACATATAGCAGTTAT+AGG | + | chr1.1:8817129-8817148 | None:intergenic | 35.0% | |
| GCTAAAGACATAGCAATCAT+GGG | - | chr1.1:8815948-8815967 | MS.gene60265:intron | 35.0% | |
| GTATGATCCGTATTACGATT+TGG | - | chr1.1:8813874-8813893 | MS.gene60265:intron | 35.0% | |
| GTTGGATGCAGTTTAGATTT+AGG | - | chr1.1:8816182-8816201 | MS.gene60265:intron | 35.0% | |
| TAATACCGTTTACTTGTGTG+GGG | + | chr1.1:8815855-8815874 | None:intergenic | 35.0% | |
| TATGTGTGTATCCTTGATCT+AGG | - | chr1.1:8816246-8816265 | MS.gene60265:intron | 35.0% | |
| TCAACATTCACTCTCTTAGT+AGG | + | chr1.1:8816942-8816961 | None:intergenic | 35.0% | |
| TGAAGTGAGGATCTTAAAGA+AGG | - | chr1.1:8817915-8817934 | MS.gene60265:intron | 35.0% | |
| TGATTGCTATGTCTTTAGCA+GGG | + | chr1.1:8815947-8815966 | None:intergenic | 35.0% | |
| TGCTAAAGACATAGCAATCA+TGG | - | chr1.1:8815947-8815966 | MS.gene60265:intron | 35.0% | |
| TGTGGTAGCTTCTATAGATT+TGG | + | chr1.1:8818013-8818032 | None:intergenic | 35.0% | |
| TTGATGTCTATACAACCACA+AGG | - | chr1.1:8814611-8814630 | MS.gene60265:intron | 35.0% | |
| ! | AACGCATTGATAAGTTGGAT+TGG | - | chr1.1:8816076-8816095 | MS.gene60265:intron | 35.0% |
| ! | ACTAAACCCAAGTCATGTTT+TGG | - | chr1.1:8817680-8817699 | MS.gene60265:intron | 35.0% |
| ! | ACTCTAACGCATTGATAAGT+TGG | - | chr1.1:8816071-8816090 | MS.gene60265:intron | 35.0% |
| ! | AGTTTGGATGGTGATGAAAA+TGG | + | chr1.1:8816714-8816733 | None:intergenic | 35.0% |
| ! | ATTGCAATCACGACATTTTC+AGG | + | chr1.1:8817760-8817779 | None:intergenic | 35.0% |
| ! | CTAAACCCAAGTCATGTTTT+GGG | - | chr1.1:8817681-8817700 | MS.gene60265:intron | 35.0% |
| ! | CTTTTCAACCCACAATTTTC+AGG | - | chr1.1:8817155-8817174 | MS.gene60265:intron | 35.0% |
| ! | GCTATTACACTTAGTTTGGA+TGG | + | chr1.1:8816726-8816745 | None:intergenic | 35.0% |
| ! | TAAACCCAAGTCATGTTTTG+GGG | - | chr1.1:8817682-8817701 | MS.gene60265:intron | 35.0% |
| ! | TTGCAATCACGACATTTTCA+GGG | + | chr1.1:8817759-8817778 | None:intergenic | 35.0% |
| ! | TTTTGCTTTCTCCAATTTGG+AGG | - | chr1.1:8814704-8814723 | MS.gene60265:intron | 35.0% |
| !! | CAGCAGAGTTTGTTTTCATT+GGG | - | chr1.1:8815698-8815717 | MS.gene60265:intron | 35.0% |
| !!! | CCTTTGTATCTGTTTTTGAC+AGG | - | chr1.1:8815066-8815085 | MS.gene60265:intron | 35.0% |
| !!! | TCGCTTGAAGCTATTTTGAT+TGG | - | chr1.1:8817261-8817280 | MS.gene60265:intron | 35.0% |
| !!! | TTTATTTTGATGAGTGGTGC+TGG | - | chr1.1:8816820-8816839 | MS.gene60265:intron | 35.0% |
| AAAACCTGCCGTATAACCAA+TGG | + | chr1.1:8816472-8816491 | None:intergenic | 40.0% | |
| AAACACCCCAAAACATGACT+TGG | + | chr1.1:8817690-8817709 | None:intergenic | 40.0% | |
| AACACCCCAAAACATGACTT+GGG | + | chr1.1:8817689-8817708 | None:intergenic | 40.0% | |
| AACCCTTCCATAAGTGCATT+GGG | - | chr1.1:8817233-8817252 | MS.gene60265:intron | 40.0% | |
| AAGACCCATCTATATGTGCA+GGG | + | chr1.1:8815797-8815816 | None:intergenic | 40.0% | |
| AAGGTAGAGTTAGATCCTCT+GGG | - | chr1.1:8814630-8814649 | MS.gene60265:intron | 40.0% | |
| AGAGTGAGTGCTAAAAAGAG+GGG | + | chr1.1:8816858-8816877 | None:intergenic | 40.0% | |
| AGCAAATGCTGTCTCAATTG+TGG | - | chr1.1:8814567-8814586 | MS.gene60265:CDS | 40.0% | |
| AGGAAGATACTCATGCTTCA+TGG | + | chr1.1:8813981-8814000 | None:intergenic | 40.0% | |
| AGTGCAGACATAATCTCTAC+AGG | - | chr1.1:8814845-8814864 | MS.gene60265:intron | 40.0% | |
| ATCTTTCTTCCATCTTGGCA+TGG | + | chr1.1:8817790-8817809 | None:intergenic | 40.0% | |
| CCAATGAAAACAAACTCTGC+TGG | + | chr1.1:8815700-8815719 | None:intergenic | 40.0% | |
| CCTCTTCACCTGAAAATTGT+GGG | + | chr1.1:8817166-8817185 | None:intergenic | 40.0% | |
| CGAAGGGGATATATATGTGT+AGG | + | chr1.1:8817843-8817862 | None:intergenic | 40.0% | |
| CTTTCAATGGAATGTGTGTC+CGG | + | chr1.1:8814328-8814347 | None:intergenic | 40.0% | |
| GAATCTCTCTGTTAACCGTA+GGG | + | chr1.1:8818070-8818089 | None:intergenic | 40.0% | |
| GATACTACCCAATGCACTTA+TGG | + | chr1.1:8817243-8817262 | None:intergenic | 40.0% | |
| GCACTCACTCTTTCATTGAA+TGG | - | chr1.1:8816867-8816886 | MS.gene60265:intron | 40.0% | |
| GCTCTATCTTTCTTCCATCT+TGG | + | chr1.1:8817795-8817814 | None:intergenic | 40.0% | |
| GTAGGGATGTATCTCAAACA+GGG | + | chr1.1:8817825-8817844 | None:intergenic | 40.0% | |
| TAAGACCCATCTATATGTGC+AGG | + | chr1.1:8815798-8815817 | None:intergenic | 40.0% | |
| TAAGGGCAACATATTCTCGT+CGG | - | chr1.1:8817984-8818003 | MS.gene60265:intron | 40.0% | |
| TACCCAATGCACTTATGGAA+GGG | + | chr1.1:8817238-8817257 | None:intergenic | 40.0% | |
| TCCAAACGTCTTCGCAAATA+CGG | - | chr1.1:8813746-8813765 | MS.gene60265:CDS | 40.0% | |
| TGACCACCATTTAACAACAC+TGG | + | chr1.1:8816363-8816382 | None:intergenic | 40.0% | |
| TGTAGGGATGTATCTCAAAC+AGG | + | chr1.1:8817826-8817845 | None:intergenic | 40.0% | |
| TTCTATTAGCGTGCGAAATG+TGG | - | chr1.1:8817615-8817634 | MS.gene60265:intron | 40.0% | |
| ! | CACTGTCCAGTGTTGTTAAA+TGG | - | chr1.1:8816354-8816373 | MS.gene60265:intron | 40.0% |
| ! | GAACTTTTGCACATGGAAGT+TGG | - | chr1.1:8816164-8816183 | MS.gene60265:intron | 40.0% |
| ! | GTGTTGTTAAATGGTGGTCA+TGG | - | chr1.1:8816363-8816382 | MS.gene60265:intron | 40.0% |
| ! | TGTCCAGTGTTGTTAAATGG+TGG | - | chr1.1:8816357-8816376 | MS.gene60265:intron | 40.0% |
| ! | TTGGTTATACGGCAGGTTTT+TGG | - | chr1.1:8816472-8816491 | MS.gene60265:intron | 40.0% |
| !! | CCAGCAGAGTTTGTTTTCAT+TGG | - | chr1.1:8815697-8815716 | MS.gene60265:intron | 40.0% |
| !! | GAAAGTGTCAGTGCTACATA+GGG | - | chr1.1:8814343-8814362 | MS.gene60265:intron | 40.0% |
| !! | TGAAAGTGTCAGTGCTACAT+AGG | - | chr1.1:8814342-8814361 | MS.gene60265:intron | 40.0% |
| !! | TGTAGCACTGACACTTTCAA+TGG | + | chr1.1:8814341-8814360 | None:intergenic | 40.0% |
| !!! | AAGTCATGTTTTGGGGTGTT+TGG | - | chr1.1:8817689-8817708 | MS.gene60265:intron | 40.0% |
| !!! | CCACAATTTTCAGGTGAAGA+GGG | - | chr1.1:8817164-8817183 | MS.gene60265:intron | 40.0% |
| AAACCAACCTGAAGATCCTC+AGG | + | chr1.1:8814001-8814020 | None:intergenic | 45.0% | |
| AACTGGGAGTGGTTCTCTAT+GGG | + | chr1.1:8816301-8816320 | None:intergenic | 45.0% | |
| ACAACAGTACACTGCACAAG+TGG | + | chr1.1:8814894-8814913 | None:intergenic | 45.0% | |
| ACCGTATTTGCGAAGACGTT+TGG | + | chr1.1:8813750-8813769 | None:intergenic | 45.0% | |
| ACGGTTAACAGAGAGATTCG+AGG | - | chr1.1:8818071-8818090 | MS.gene60265:CDS | 45.0% | |
| AGACATGGACAGGTTTACGA+GGG | - | chr1.1:8814244-8814263 | MS.gene60265:intron | 45.0% | |
| AGGATACACACATAGATGGC+AGG | + | chr1.1:8816240-8816259 | None:intergenic | 45.0% | |
| AGGCAATGCAAACACCATTC+AGG | - | chr1.1:8815086-8815105 | MS.gene60265:intron | 45.0% | |
| ATGGAAGGGTTCGTTGATAC+AGG | + | chr1.1:8817224-8817243 | None:intergenic | 45.0% | |
| ATGGCAGTTGATTGTGAGGA+AGG | - | chr1.1:8815973-8815992 | MS.gene60265:intron | 45.0% | |
| ATGTGCCCCACACAAGTAAA+CGG | - | chr1.1:8815847-8815866 | MS.gene60265:intron | 45.0% | |
| ATTGTGAGGAAGGATTCCAG+AGG | - | chr1.1:8815983-8816002 | MS.gene60265:intron | 45.0% | |
| CAAAGGTCAGCATATCCTGA+AGG | + | chr1.1:8815117-8815136 | None:intergenic | 45.0% | |
| CAAGGTAGAGTTAGATCCTC+TGG | - | chr1.1:8814629-8814648 | MS.gene60265:intron | 45.0% | |
| CCCTCTTCACCTGAAAATTG+TGG | + | chr1.1:8817167-8817186 | None:intergenic | 45.0% | |
| CGAATCTCTCTGTTAACCGT+AGG | + | chr1.1:8818071-8818090 | None:intergenic | 45.0% | |
| CTACCCAATGCACTTATGGA+AGG | + | chr1.1:8817239-8817258 | None:intergenic | 45.0% | |
| GAACCCTTCCATAAGTGCAT+TGG | - | chr1.1:8817232-8817251 | MS.gene60265:intron | 45.0% | |
| GAAGCATGAGTATCTTCCTG+AGG | - | chr1.1:8813982-8814001 | MS.gene60265:intron | 45.0% | |
| GACATAGCAATCATGGGTCA+TGG | - | chr1.1:8815954-8815973 | MS.gene60265:intron | 45.0% | |
| GAGGATCTAACTCTACCTTG+TGG | + | chr1.1:8814629-8814648 | None:intergenic | 45.0% | |
| GAGTGAGTGCTAAAAAGAGG+GGG | + | chr1.1:8816857-8816876 | None:intergenic | 45.0% | |
| GATACACACATAGATGGCAG+GGG | + | chr1.1:8816238-8816257 | None:intergenic | 45.0% | |
| GGATACACACATAGATGGCA+GGG | + | chr1.1:8816239-8816258 | None:intergenic | 45.0% | |
| GTATCTTCCTGAGGATCTTC+AGG | - | chr1.1:8813991-8814010 | MS.gene60265:intron | 45.0% | |
| GTGCTGTAAACTTCCCTCTT+GGG | - | chr1.1:8817378-8817397 | MS.gene60265:intron | 45.0% | |
| TGGAAGGGTTCGTTGATACA+GGG | + | chr1.1:8817223-8817242 | None:intergenic | 45.0% | |
| TGTGGGGCTCATTTGTAGAA+TGG | - | chr1.1:8816896-8816915 | MS.gene60265:intron | 45.0% | |
| TTAAGGTCTTCAACTGGGAG+TGG | + | chr1.1:8816312-8816331 | None:intergenic | 45.0% | |
| ! | GCAGCGAACCAGTTTTTCTT+TGG | + | chr1.1:8813707-8813726 | None:intergenic | 45.0% |
| ! | TTTGAATCGGCTTCCAAAGG+AGG | - | chr1.1:8813910-8813929 | MS.gene60265:intron | 45.0% |
| !! | ATTTGGTGTCCATGCCAAGA+TGG | - | chr1.1:8817778-8817797 | MS.gene60265:CDS | 45.0% |
| !! | TGAGGATCTTCAGGTTGGTT+TGG | - | chr1.1:8814000-8814019 | MS.gene60265:intron | 45.0% |
| !!! | CCCACAATTTTCAGGTGAAG+AGG | - | chr1.1:8817163-8817182 | MS.gene60265:intron | 45.0% |
| !!! | AACATTTTTATAAATAAAAA+AGG | + | chr1.1:8815638-8815657 | None:intergenic | 5.0% |
| ACCATTCAGGAGCTACCTTC+AGG | - | chr1.1:8815099-8815118 | MS.gene60265:intron | 50.0% | |
| ACTGGACACTGACAGCATCA+TGG | - | chr1.1:8816513-8816532 | MS.gene60265:intron | 50.0% | |
| ACTTGTGTGGGGCACATATG+TGG | + | chr1.1:8815844-8815863 | None:intergenic | 50.0% | |
| CAACTGGGAGTGGTTCTCTA+TGG | + | chr1.1:8816302-8816321 | None:intergenic | 50.0% | |
| CAGACATGGACAGGTTTACG+AGG | - | chr1.1:8814243-8814262 | MS.gene60265:intron | 50.0% | |
| CGAGCATCAACAACCTCCTT+TGG | + | chr1.1:8813926-8813945 | None:intergenic | 50.0% | |
| CTCAAGGGTTGTTCAACCTC+TGG | + | chr1.1:8816002-8816021 | None:intergenic | 50.0% | |
| CTCCACAGTACTCAGCTCAA+GGG | + | chr1.1:8816017-8816036 | None:intergenic | 50.0% | |
| CTGCCGTATAACCAATGGCA+CGG | + | chr1.1:8816467-8816486 | None:intergenic | 50.0% | |
| CTGGTATCATGCCCCAACAT+CGG | + | chr1.1:8816042-8816061 | None:intergenic | 50.0% | |
| CTTCCTGAGGATCTTCAGGT+TGG | - | chr1.1:8813995-8814014 | MS.gene60265:intron | 50.0% | |
| GCGTTAGAGTCCATATCAGC+TGG | + | chr1.1:8816061-8816080 | None:intergenic | 50.0% | |
| GCTATGTCTTTAGCAGGGCT+TGG | + | chr1.1:8815942-8815961 | None:intergenic | 50.0% | |
| GGAAGGGTTCGTTGATACAG+GGG | + | chr1.1:8817222-8817241 | None:intergenic | 50.0% | |
| GGGCATGATACCAGCTGATA+TGG | - | chr1.1:8816048-8816067 | MS.gene60265:intron | 50.0% | |
| GGTCATGGCAGTTGATTGTG+AGG | - | chr1.1:8815969-8815988 | MS.gene60265:intron | 50.0% | |
| TACTGTGGAGACCCGATGTT+GGG | - | chr1.1:8816027-8816046 | MS.gene60265:intron | 50.0% | |
| TCCTGAAGGTAGCTCCTGAA+TGG | + | chr1.1:8815103-8815122 | None:intergenic | 50.0% | |
| TCTCCACAGTACTCAGCTCA+AGG | + | chr1.1:8816018-8816037 | None:intergenic | 50.0% | |
| TGCCGTATAACCAATGGCAC+GGG | + | chr1.1:8816466-8816485 | None:intergenic | 50.0% | |
| TGGGCCCTGCACATATAGAT+GGG | - | chr1.1:8815790-8815809 | MS.gene60265:intron | 50.0% | |
| TGGTATCATGCCCCAACATC+GGG | + | chr1.1:8816041-8816060 | None:intergenic | 50.0% | |
| TGTTAACCGTAGGGCAGCAA+TGG | + | chr1.1:8818061-8818080 | None:intergenic | 50.0% | |
| TTGGGCCCTGCACATATAGA+TGG | - | chr1.1:8815789-8815808 | MS.gene60265:intron | 50.0% | |
| TTGTGAAGGGATTCCCGTCA+TGG | - | chr1.1:8816440-8816459 | MS.gene60265:intron | 50.0% | |
| ! | AACCCTTGAGCTGAGTACTG+TGG | - | chr1.1:8816012-8816031 | MS.gene60265:intron | 50.0% |
| ! | GGTGCTGTAAACTTCCCTCT+TGG | - | chr1.1:8817377-8817396 | MS.gene60265:intron | 50.0% |
| !! | GGCTTTGAATCGGCTTCCAA+AGG | - | chr1.1:8813907-8813926 | MS.gene60265:intron | 50.0% |
| ACGAGCAGAGCGTGAAGCAT+TGG | - | chr1.1:8817188-8817207 | MS.gene60265:intron | 55.0% | |
| ACTGTGGAGACCCGATGTTG+GGG | - | chr1.1:8816028-8816047 | MS.gene60265:intron | 55.0% | |
| ATGCCACCATTGCTGCCCTA+CGG | - | chr1.1:8818052-8818071 | MS.gene60265:CDS | 55.0% | |
| CACACATAGATGGCAGGGGA+TGG | + | chr1.1:8816234-8816253 | None:intergenic | 55.0% | |
| CACGTGTGTCAGTGTCGTGT+CGG | - | chr1.1:8814294-8814313 | MS.gene60265:intron | 55.0% | |
| GCATGTGCTCGACACAGACA+TGG | - | chr1.1:8814229-8814248 | MS.gene60265:intron | 55.0% | |
| GGTGGTCATGGTAGCCACTA+TGG | - | chr1.1:8816375-8816394 | MS.gene60265:intron | 55.0% | |
| GTACTGTGGAGACCCGATGT+TGG | - | chr1.1:8816026-8816045 | MS.gene60265:intron | 55.0% | |
| TAACCGTAGGGCAGCAATGG+TGG | + | chr1.1:8818058-8818077 | None:intergenic | 55.0% | |
| TCAGTGTCCAGTGCTGTCGT+TGG | + | chr1.1:8816505-8816524 | None:intergenic | 55.0% | |
| TGCTCGACACAGACATGGAC+AGG | - | chr1.1:8814234-8814253 | MS.gene60265:intron | 55.0% | |
| ! | CGAGCAGAGCGTGAAGCATT+GGG | - | chr1.1:8817189-8817208 | MS.gene60265:intron | 55.0% |
| ! | CGTGCCATTGGTTATACGGC+AGG | - | chr1.1:8816465-8816484 | MS.gene60265:intron | 55.0% |
| ! | GGCCCGTGCCATTGGTTATA+CGG | - | chr1.1:8816461-8816480 | MS.gene60265:intron | 55.0% |
| ACCAATGGCACGGGCCATGA+CGG | + | chr1.1:8816457-8816476 | None:intergenic | 60.0% | |
| ACCACAGGGTTACGAGCAGC+AGG | - | chr1.1:8818027-8818046 | MS.gene60265:CDS | 60.0% | |
| CCACAGGGTTACGAGCAGCA+GGG | - | chr1.1:8818028-8818047 | MS.gene60265:CDS | 60.0% | |
| CCAGTGCTGTCGTTGGCAGA+AGG | + | chr1.1:8816498-8816517 | None:intergenic | 60.0% | |
| CCTTCTGCCAACGACAGCAC+TGG | - | chr1.1:8816495-8816514 | MS.gene60265:intron | 60.0% | |
| ! | GTGTCAGTGTCGTGTCGGTG+TGG | - | chr1.1:8814299-8814318 | MS.gene60265:intron | 60.0% |
| ! | TGTCGTGTCGGTGTGGACAC+CGG | - | chr1.1:8814306-8814325 | MS.gene60265:intron | 60.0% |
| !! | GCAGAGCGTGAAGCATTGGG+AGG | - | chr1.1:8817192-8817211 | MS.gene60265:intron | 60.0% |
| CCAATGGCACGGGCCATGAC+GGG | + | chr1.1:8816456-8816475 | None:intergenic | 65.0% | |
| CCCTGCTGCTCGTAACCCTG+TGG | + | chr1.1:8818031-8818050 | None:intergenic | 65.0% | |
| CCCGTCATGGCCCGTGCCAT+TGG | - | chr1.1:8816453-8816472 | MS.gene60265:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 8813674 | 8818098 | 8813674 | ID=MS.gene60265 |
| chr1.1 | mRNA | 8813674 | 8818098 | 8813674 | ID=MS.gene60265.t1;Parent=MS.gene60265 |
| chr1.1 | exon | 8818005 | 8818098 | 8818005 | ID=MS.gene60265.t1.exon1;Parent=MS.gene60265.t1 |
| chr1.1 | CDS | 8818005 | 8818098 | 8818005 | ID=cds.MS.gene60265.t1;Parent=MS.gene60265.t1 |
| chr1.1 | exon | 8817760 | 8817917 | 8817760 | ID=MS.gene60265.t1.exon2;Parent=MS.gene60265.t1 |
| chr1.1 | CDS | 8817760 | 8817917 | 8817760 | ID=cds.MS.gene60265.t1;Parent=MS.gene60265.t1 |
| chr1.1 | exon | 8816637 | 8816684 | 8816637 | ID=MS.gene60265.t1.exon3;Parent=MS.gene60265.t1 |
| chr1.1 | CDS | 8816637 | 8816684 | 8816637 | ID=cds.MS.gene60265.t1;Parent=MS.gene60265.t1 |
| chr1.1 | exon | 8814559 | 8814595 | 8814559 | ID=MS.gene60265.t1.exon4;Parent=MS.gene60265.t1 |
| chr1.1 | CDS | 8814559 | 8814595 | 8814559 | ID=cds.MS.gene60265.t1;Parent=MS.gene60265.t1 |
| chr1.1 | exon | 8813674 | 8813852 | 8813674 | ID=MS.gene60265.t1.exon5;Parent=MS.gene60265.t1 |
| chr1.1 | CDS | 8813674 | 8813852 | 8813674 | ID=cds.MS.gene60265.t1;Parent=MS.gene60265.t1 |
| Gene Sequence |
| Protein sequence |
