Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61682.t1 | XP_003588718.1 | 99.1 | 112 | 1 | 0 | 1 | 112 | 1 | 112 | 4.40E-55 | 224.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61682.t1 | F4JWS8 | 76.0 | 121 | 29 | 0 | 1 | 121 | 1 | 121 | 5.5e-46 | 185.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61682.t1 | B7FGY5 | 99.1 | 112 | 1 | 0 | 1 | 112 | 1 | 112 | 3.2e-55 | 224.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene61682 | 0.811629 | 6.36E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene61682 | 0.811979 | 5.34E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene61682 | 0.831925 | 1.27E-55 | -1.69E-46 |
| MS.gene049786 | MS.gene61682 | 0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene61682 | 0.833133 | 6.35E-56 | -1.69E-46 |
| MS.gene050114 | MS.gene61682 | 0.837176 | 6.07E-57 | -1.69E-46 |
| MS.gene050277 | MS.gene61682 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene61682 | 0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene050317 | MS.gene61682 | 0.823155 | 1.61E-53 | -1.69E-46 |
| MS.gene050439 | MS.gene61682 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene61682 | -0.809089 | 2.25E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene61682 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene61682 | 0.830067 | 3.62E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene61682 | 0.819145 | 1.35E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene61682 | 0.816602 | 5.08E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene61682 | 0.805177 | 1.51E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene61682 | 0.812881 | 3.39E-51 | -1.69E-46 |
| MS.gene051245 | MS.gene61682 | 0.823889 | 1.09E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene61682 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene61682 | 0.821381 | 4.16E-53 | -1.69E-46 |
| MS.gene051756 | MS.gene61682 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene051757 | MS.gene61682 | 0.87398 | 9.66E-68 | -1.69E-46 |
| MS.gene051975 | MS.gene61682 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene052376 | MS.gene61682 | 0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene61682 | 0.839229 | 1.79E-57 | -1.69E-46 |
| MS.gene052856 | MS.gene61682 | 0.809961 | 1.46E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene61682 | 0.800202 | 1.61E-48 | -1.69E-46 |
| MS.gene053109 | MS.gene61682 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene053381 | MS.gene61682 | 0.846874 | 1.65E-59 | -1.69E-46 |
| MS.gene05462 | MS.gene61682 | 0.813001 | 3.19E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene61682 | 0.804764 | 1.85E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene61682 | 0.818607 | 1.79E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene61682 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene61682 | 0.829258 | 5.69E-55 | -1.69E-46 |
| MS.gene055623 | MS.gene61682 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene61682 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene61682 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene61682 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene056638 | MS.gene61682 | 0.817889 | 2.61E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene61682 | 0.808313 | 3.29E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene61682 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene057055 | MS.gene61682 | 0.819102 | 1.39E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene61682 | 0.805055 | 1.61E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene61682 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene61682 | 0.824287 | 8.76E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene61682 | 0.853759 | 1.93E-61 | -1.69E-46 |
| MS.gene058084 | MS.gene61682 | 0.855982 | 4.38E-62 | -1.69E-46 |
| MS.gene058182 | MS.gene61682 | 0.805526 | 1.28E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene61682 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene61682 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene61682 | 0.871064 | 9.08E-67 | -1.69E-46 |
| MS.gene059249 | MS.gene61682 | 0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene61682 | 0.81659 | 5.11E-52 | -1.69E-46 |
| MS.gene05961 | MS.gene61682 | 0.8055 | 1.30E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene61682 | 0.806422 | 8.29E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene61682 | 0.817365 | 3.42E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene61682 | 0.827505 | 1.51E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene61682 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene61682 | 0.815158 | 1.07E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene61682 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene060702 | MS.gene61682 | 0.842647 | 2.28E-58 | -1.69E-46 |
| MS.gene060803 | MS.gene61682 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene61682 | 0.82425 | 8.94E-54 | -1.69E-46 |
| MS.gene060870 | MS.gene61682 | 0.823289 | 1.50E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene61682 | 0.803036 | 4.22E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61682 | MS.gene015970 | PPI |
| MS.gene61682 | MS.gene51557 | PPI |
| MS.gene61682 | MS.gene60265 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61682.t1 | MTR_1g011880 | 99.107 | 112 | 1 | 0 | 1 | 112 | 1 | 112 | 8.09e-79 | 231 |
| MS.gene61682.t1 | MTR_1g011880 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 6.84e-71 | 211 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61682.t1 | AT5G25450 | 75.410 | 122 | 30 | 0 | 1 | 122 | 1 | 122 | 3.14e-63 | 192 |
| MS.gene61682.t1 | AT4G32470 | 75.221 | 113 | 28 | 0 | 1 | 113 | 1 | 113 | 1.53e-59 | 183 |
| MS.gene61682.t1 | AT4G32470 | 76.000 | 100 | 24 | 0 | 1 | 100 | 1 | 100 | 3.69e-53 | 166 |
| MS.gene61682.t1 | AT5G25450 | 64.754 | 122 | 27 | 1 | 1 | 122 | 1 | 106 | 4.07e-48 | 153 |
| MS.gene61682.t1 | AT5G25450 | 76.471 | 85 | 20 | 0 | 1 | 85 | 1 | 85 | 1.58e-43 | 141 |
Find 53 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTAGCTTCTATAGATT+TGG | 0.270022 | 1.3:+9223877 | None:intergenic |
| GTATTACGATTTGGATATTA+AGG | 0.274133 | 1.3:-9228032 | MS.gene61682:CDS |
| AAACAAGACAGTGATTAATA+AGG | 0.287731 | 1.3:-9223921 | MS.gene61682:CDS |
| ACCGTATTTGCGAAGACGTT+TGG | 0.293147 | 1.3:+9228168 | None:intergenic |
| TTCACGTGGAATGTCCATTA+TGG | 0.327957 | 1.3:+9222884 | None:intergenic |
| GTATCTTCCTGAGGATCTTC+AGG | 0.339636 | 1.3:-9227924 | MS.gene61682:intron |
| GTATGATCCGTATTACGATT+TGG | 0.362212 | 1.3:-9228041 | MS.gene61682:CDS |
| TCCAAACGTCTTCGCAAATA+CGG | 0.376472 | 1.3:-9228169 | MS.gene61682:intron |
| AACAAGACAGTGATTAATAA+GGG | 0.409817 | 1.3:-9223920 | MS.gene61682:CDS |
| CATCCACTTCCTAACCATAA+TGG | 0.411315 | 1.3:-9222898 | MS.gene61682:CDS |
| CGAGCATCAACAACCTCCTT+TGG | 0.426514 | 1.3:+9227992 | None:intergenic |
| ACCACAGGGTTACGAGCAGC+AGG | 0.439743 | 1.3:-9223860 | MS.gene61682:CDS |
| CGAGCAGAGCGTGAAGCATT+GGG | 0.452428 | 1.3:-9224707 | MS.gene61682:CDS |
| ACGAGCAGAGCGTGAAGCAT+TGG | 0.467463 | 1.3:-9224708 | MS.gene61682:CDS |
| AGGAAGATACTCATGCTTCA+TGG | 0.469418 | 1.3:+9227937 | None:intergenic |
| TTAATATCCAAATCGTAATA+CGG | 0.475035 | 1.3:+9228034 | None:intergenic |
| GGAATAGCTATTAACTGTTG+TGG | 0.478156 | 1.3:+9222805 | None:intergenic |
| AGGCAATGCAAACACCATTC+AGG | 0.479539 | 1.3:-9226810 | MS.gene61682:CDS |
| GTGGAATGTCCATTATGGTT+AGG | 0.485287 | 1.3:+9222889 | None:intergenic |
| TTAAAGAAGGGAAGTATAAG+TGG | 0.492175 | 1.3:-9223959 | MS.gene61682:CDS |
| TGAAGTGAGGATCTTAAAGA+AGG | 0.499292 | 1.3:-9223972 | MS.gene61682:intron |
| ACCATTCAGGAGCTACCTTC+AGG | 0.525111 | 1.3:-9226797 | MS.gene61682:CDS |
| TCCTGAAGGTAGCTCCTGAA+TGG | 0.529425 | 1.3:+9226796 | None:intergenic |
| GGCTTTGAATCGGCTTCCAA+AGG | 0.532273 | 1.3:-9228008 | MS.gene61682:CDS |
| ATATTAAGGAGGCTTTGAAT+CGG | 0.539685 | 1.3:-9228018 | MS.gene61682:CDS |
| TGTCCATTATGGTTAGGAAG+TGG | 0.540132 | 1.3:+9222895 | None:intergenic |
| CATTATGGTTAGGAAGTGGA+TGG | 0.543638 | 1.3:+9222899 | None:intergenic |
| AAACCAACCTGAAGATCCTC+AGG | 0.545207 | 1.3:+9227917 | None:intergenic |
| AATGTAGGACATCCTTCTCA+TGG | 0.553249 | 1.3:+9222860 | None:intergenic |
| ATGCCACCATTGCTGCCCTA+CGG | 0.556597 | 1.3:-9223835 | MS.gene61682:CDS |
| TTTGAATCGGCTTCCAAAGG+AGG | 0.563776 | 1.3:-9228005 | MS.gene61682:CDS |
| TGTTAACCGTAGGGCAGCAA+TGG | 0.575960 | 1.3:+9223829 | None:intergenic |
| AAATCTATAGAAGCTACCAC+AGG | 0.576803 | 1.3:-9223875 | MS.gene61682:CDS |
| TAACCGTAGGGCAGCAATGG+TGG | 0.583879 | 1.3:+9223832 | None:intergenic |
| TTACGATTTGGATATTAAGG+AGG | 0.584001 | 1.3:-9228029 | MS.gene61682:CDS |
| CAAACCTCTCTGTTAACCGT+AGG | 0.586779 | 1.3:+9223819 | None:intergenic |
| ATATAAGAGCGACCGGTGGA+TGG | 0.593334 | 1.3:+9222830 | None:intergenic |
| CTGCCCTACGGTTAACAGAG+AGG | 0.596807 | 1.3:-9223823 | MS.gene61682:intron |
| GTGGATGGCTTTGCTAATGT+AGG | 0.598569 | 1.3:+9222845 | None:intergenic |
| GAAGTGAGGATCTTAAAGAA+GGG | 0.602165 | 1.3:-9223971 | MS.gene61682:intron |
| TGTGGACATATAAGAGCGAC+CGG | 0.602428 | 1.3:+9222823 | None:intergenic |
| AAACCTCTCTGTTAACCGTA+GGG | 0.607001 | 1.3:+9223820 | None:intergenic |
| TAAGGGCAACATATTCTCGT+CGG | 0.612643 | 1.3:-9223903 | MS.gene61682:CDS |
| ACATTAGCAAAGCCATCCAC+CGG | 0.617354 | 1.3:-9222842 | MS.gene61682:CDS |
| CAAAGGTCAGCATATCCTGA+AGG | 0.627878 | 1.3:+9226782 | None:intergenic |
| TTCCACGTGAATCCATGAGA+AGG | 0.637394 | 1.3:-9222872 | MS.gene61682:CDS |
| GCAGAGCGTGAAGCATTGGG+AGG | 0.668632 | 1.3:-9224704 | MS.gene61682:intron |
| ATCCTTCTCATGGATTCACG+TGG | 0.670042 | 1.3:+9222870 | None:intergenic |
| CCCTGCTGCTCGTAACCCTG+TGG | 0.673021 | 1.3:+9223859 | None:intergenic |
| GAAGCATGAGTATCTTCCTG+AGG | 0.684541 | 1.3:-9227933 | MS.gene61682:CDS |
| AATCTATAGAAGCTACCACA+GGG | 0.688978 | 1.3:-9223874 | MS.gene61682:CDS |
| CCACAGGGTTACGAGCAGCA+GGG | 0.702097 | 1.3:-9223859 | MS.gene61682:CDS |
| GGACATATAAGAGCGACCGG+TGG | 0.720930 | 1.3:+9222826 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATGTTTAATAAAAAA+AGG | + | chr1.3:9224429-9224448 | None:intergenic | 10.0% |
| !!! | CAAAAAAAATTGAATTTTTT+TGG | - | chr1.3:9223181-9223200 | MS.gene61682:intron | 10.0% |
| !!! | TCTTATTTTAATTTAAACTA+GGG | - | chr1.3:9223819-9223838 | MS.gene61682:intron | 10.0% |
| !!! | TTCTTATTTTAATTTAAACT+AGG | - | chr1.3:9223818-9223837 | MS.gene61682:intron | 10.0% |
| !!! | TTTTGTATAATTTTCAATTT+TGG | - | chr1.3:9227909-9227928 | MS.gene61682:intron | 10.0% |
| !! | AAATACAATTTCACAAATTA+GGG | + | chr1.3:9222961-9222980 | None:intergenic | 15.0% |
| !! | ATTTAACATGTTAACTAATA+GGG | - | chr1.3:9225702-9225721 | MS.gene61682:intron | 15.0% |
| !! | TATTTAACATGTTAACTAAT+AGG | - | chr1.3:9225701-9225720 | MS.gene61682:intron | 15.0% |
| !!! | AATTTTCAATTTTGGAAATA+TGG | - | chr1.3:9227917-9227936 | MS.gene61682:intron | 15.0% |
| !!! | CAATATTTTTGTAATTCATT+GGG | - | chr1.3:9224931-9224950 | MS.gene61682:intron | 15.0% |
| !!! | CTTTTAAAATTAATTTTGAC+TGG | + | chr1.3:9227710-9227729 | None:intergenic | 15.0% |
| !!! | GAAATGATTTTATAATTGTT+TGG | + | chr1.3:9225819-9225838 | None:intergenic | 15.0% |
| !!! | TATACAAATCTTTGAAAATA+AGG | + | chr1.3:9224823-9224842 | None:intergenic | 15.0% |
| !!! | TGTTTTGATATAACTTTATA+TGG | - | chr1.3:9224378-9224397 | MS.gene61682:intron | 15.0% |
| !!! | TTATTTTCAAAGATTTGTAT+AGG | - | chr1.3:9224822-9224841 | MS.gene61682:intron | 15.0% |
| !! | AAAAAACGAAATGAAGATTT+AGG | + | chr1.3:9222926-9222945 | None:intergenic | 20.0% |
| !! | AACAATAACATATGAAACAT+GGG | - | chr1.3:9223374-9223393 | MS.gene61682:intron | 20.0% |
| !! | ATAAAATCTAACAAGTAAGA+TGG | + | chr1.3:9225965-9225984 | None:intergenic | 20.0% |
| !! | ATCCTGTAAAATAAAATTTG+TGG | - | chr1.3:9226897-9226916 | MS.gene61682:intron | 20.0% |
| !! | CAAATACAATTTCACAAATT+AGG | + | chr1.3:9222962-9222981 | None:intergenic | 20.0% |
| !! | GATAAGATTGAAGTATATTT+GGG | + | chr1.3:9224513-9224532 | None:intergenic | 20.0% |
| !! | TAAAATCTAACAAGTAAGAT+GGG | + | chr1.3:9225964-9225983 | None:intergenic | 20.0% |
| !! | TCAAATGAAGAAGAAAAAAA+AGG | - | chr1.3:9224908-9224927 | MS.gene61682:intron | 20.0% |
| !! | TCCTGTAAAATAAAATTTGT+GGG | - | chr1.3:9226898-9226917 | MS.gene61682:intron | 20.0% |
| !! | TTAATATCCAAATCGTAATA+CGG | + | chr1.3:9223025-9223044 | None:intergenic | 20.0% |
| !! | TTAGTAGGTAAAATTTATCT+GGG | + | chr1.3:9226087-9226106 | None:intergenic | 20.0% |
| !! | TTTATTTCATTTCACATTTG+AGG | - | chr1.3:9223673-9223692 | MS.gene61682:intron | 20.0% |
| !!! | AAAAAACCTTTTAAAAGACA+TGG | + | chr1.3:9227807-9227826 | None:intergenic | 20.0% |
| !!! | AAAAACCTTTTAAAAGACAT+GGG | + | chr1.3:9227806-9227825 | None:intergenic | 20.0% |
| !!! | AATGTGGAATATTATTTTAC+AGG | - | chr1.3:9226800-9226819 | MS.gene61682:CDS | 20.0% |
| !!! | CACAAAAAATCATTATTTTG+CGG | - | chr1.3:9227682-9227701 | MS.gene61682:intron | 20.0% |
| !!! | GCAATATTTTTGTAATTCAT+TGG | - | chr1.3:9224930-9224949 | MS.gene61682:intron | 20.0% |
| !!! | GTATTTGATTTGTGAAATTA+GGG | - | chr1.3:9222975-9222994 | MS.gene61682:intron | 20.0% |
| !!! | TCATTTGATTACTATTTTCA+AGG | + | chr1.3:9224896-9224915 | None:intergenic | 20.0% |
| !!! | TGTATTTGATTTGTGAAATT+AGG | - | chr1.3:9222974-9222993 | MS.gene61682:intron | 20.0% |
| !!! | TTAGATTTTATTTTGATGAG+TGG | - | chr1.3:9225974-9225993 | MS.gene61682:intron | 20.0% |
| !!! | TTGGAAATGATTTTGTTTTA+GGG | + | chr1.3:9227516-9227535 | None:intergenic | 20.0% |
| !!! | TTTTGGTTTTGTTTTGTTTT+TGG | - | chr1.3:9223198-9223217 | MS.gene61682:intron | 20.0% |
| ! | AAAAAAATGTGGTCCATATA+AGG | + | chr1.3:9226526-9226545 | None:intergenic | 25.0% |
| ! | AAAACAAAATCATTTCCAAC+AGG | - | chr1.3:9227517-9227536 | MS.gene61682:intron | 25.0% |
| ! | AAAATGGAACAAAAACAACA+AGG | + | chr1.3:9225858-9225877 | None:intergenic | 25.0% |
| ! | AAACAAAATCATTTCCAACA+GGG | - | chr1.3:9227518-9227537 | MS.gene61682:intron | 25.0% |
| ! | AAACAAGACAGTGATTAATA+AGG | - | chr1.3:9227135-9227154 | MS.gene61682:intron | 25.0% |
| ! | AAACCATACAAACACTAAAT+TGG | - | chr1.3:9227985-9228004 | MS.gene61682:CDS | 25.0% |
| ! | AAATTTATTGAAAGTCCTTG+TGG | - | chr1.3:9223534-9223553 | MS.gene61682:intron | 25.0% |
| ! | AACAAGACAGTGATTAATAA+GGG | - | chr1.3:9227136-9227155 | MS.gene61682:intron | 25.0% |
| ! | AACTCTTCAATTCAAATTGT+AGG | - | chr1.3:9227339-9227358 | MS.gene61682:intron | 25.0% |
| ! | AATAGAATCAAATAACGAGA+TGG | - | chr1.3:9223597-9223616 | MS.gene61682:intron | 25.0% |
| ! | AATGATTCCAATAAAGACAA+TGG | + | chr1.3:9226642-9226661 | None:intergenic | 25.0% |
| ! | ACAAATTTGCAATGCATTAT+GGG | - | chr1.3:9227757-9227776 | MS.gene61682:intron | 25.0% |
| ! | ACACATTCTCATTTATTGTT+TGG | + | chr1.3:9223951-9223970 | None:intergenic | 25.0% |
| ! | ACTGTCAAACATATAAAACA+AGG | + | chr1.3:9224306-9224325 | None:intergenic | 25.0% |
| ! | AGACTTACCAAAATAAAAGA+TGG | - | chr1.3:9226716-9226735 | MS.gene61682:intron | 25.0% |
| ! | AGCAAATATGAACTAACAAA+AGG | + | chr1.3:9224686-9224705 | None:intergenic | 25.0% |
| ! | ATAGAATCAAATAACGAGAT+GGG | - | chr1.3:9223598-9223617 | MS.gene61682:intron | 25.0% |
| ! | ATGATTCCAATAAAGACAAT+GGG | + | chr1.3:9226641-9226660 | None:intergenic | 25.0% |
| ! | ATGCAAGCCATAAATTATAA+AGG | + | chr1.3:9226608-9226627 | None:intergenic | 25.0% |
| ! | CAAATATAGTAGCATAATTG+AGG | - | chr1.3:9224593-9224612 | MS.gene61682:intron | 25.0% |
| ! | CAATCTAAGCAATGTATTTA+AGG | + | chr1.3:9224535-9224554 | None:intergenic | 25.0% |
| ! | CTTAGTAGGTAAAATTTATC+TGG | + | chr1.3:9226088-9226107 | None:intergenic | 25.0% |
| ! | GAAATAAAATGCATTTCACA+AGG | + | chr1.3:9223661-9223680 | None:intergenic | 25.0% |
| ! | GAACAATAACATATGAAACA+TGG | - | chr1.3:9223373-9223392 | MS.gene61682:intron | 25.0% |
| ! | GAAGATCTAAATATCTTGTT+TGG | - | chr1.3:9224134-9224153 | MS.gene61682:intron | 25.0% |
| ! | GGATAAGATTGAAGTATATT+TGG | + | chr1.3:9224514-9224533 | None:intergenic | 25.0% |
| ! | TAAAATGTACTCTACTATTG+TGG | - | chr1.3:9226454-9226473 | MS.gene61682:intron | 25.0% |
| ! | TACAAATTTGCAATGCATTA+TGG | - | chr1.3:9227756-9227775 | MS.gene61682:intron | 25.0% |
| ! | TATTGGAATCATTTCTTGTT+TGG | - | chr1.3:9226649-9226668 | MS.gene61682:intron | 25.0% |
| ! | TCAAAGATTTGTATAGGAAA+AGG | - | chr1.3:9224828-9224847 | MS.gene61682:intron | 25.0% |
| ! | TGTAAAATAAAATTTGTGGG+TGG | - | chr1.3:9226901-9226920 | MS.gene61682:intron | 25.0% |
| ! | TTAGTTGAATAGAAAATGAG+AGG | + | chr1.3:9225753-9225772 | None:intergenic | 25.0% |
| ! | TTTCTATTCAACTAAATGAG+AGG | - | chr1.3:9225758-9225777 | MS.gene61682:intron | 25.0% |
| !! | ATTTTACCCATTGTCTTTAT+TGG | - | chr1.3:9226632-9226651 | MS.gene61682:intron | 25.0% |
| !! | CGTACTATATACATTTTAGA+TGG | + | chr1.3:9227417-9227436 | None:intergenic | 25.0% |
| !! | GATATATACTTGTTGAGTTT+AGG | + | chr1.3:9227056-9227075 | None:intergenic | 25.0% |
| !! | GTAAAATTTGAAGGGTTTTT+GGG | + | chr1.3:9225052-9225071 | None:intergenic | 25.0% |
| !! | GTATTACGATTTGGATATTA+AGG | - | chr1.3:9223024-9223043 | MS.gene61682:intron | 25.0% |
| !! | TAAATATCTTGTTTGGTATG+TGG | - | chr1.3:9224141-9224160 | MS.gene61682:intron | 25.0% |
| !! | TATTGCTATTACACTTAGTT+TGG | + | chr1.3:9225890-9225909 | None:intergenic | 25.0% |
| !! | TGCTACTATATTTGTTGAAA+TGG | + | chr1.3:9224587-9224606 | None:intergenic | 25.0% |
| !! | TGTGTTTGTATTGATAGAAA+TGG | - | chr1.3:9223288-9223307 | MS.gene61682:intron | 25.0% |
| !! | TTTAAAAGACTCTAGTTCAT+GGG | - | chr1.3:9227722-9227741 | MS.gene61682:intron | 25.0% |
| !!! | AAAACCTTTTAAAAGACATG+GGG | + | chr1.3:9227805-9227824 | None:intergenic | 25.0% |
| !!! | AATCACTCCATCTTTTATTT+TGG | + | chr1.3:9226726-9226745 | None:intergenic | 25.0% |
| !!! | ACCCACAAATTTTATTTTAC+AGG | + | chr1.3:9226902-9226921 | None:intergenic | 25.0% |
| !!! | GGATAGTTTTACAATAAAAG+TGG | + | chr1.3:9223930-9223949 | None:intergenic | 25.0% |
| !!! | GTAGCAAAAAGTGTTATTTT+TGG | - | chr1.3:9226251-9226270 | MS.gene61682:intron | 25.0% |
| !!! | GTTGGAAATGATTTTGTTTT+AGG | + | chr1.3:9227517-9227536 | None:intergenic | 25.0% |
| !!! | TTATATGGACCACATTTTTT+TGG | - | chr1.3:9226525-9226544 | MS.gene61682:intron | 25.0% |
| !!! | TTTTAAAAGACTCTAGTTCA+TGG | - | chr1.3:9227721-9227740 | MS.gene61682:intron | 25.0% |
| AAAAAGGCAATCAAGAAGTA+TGG | + | chr1.3:9224413-9224432 | None:intergenic | 30.0% | |
| AAAATAAGAAAAACTCCCAG+AGG | + | chr1.3:9223808-9223827 | None:intergenic | 30.0% | |
| AAAATGTCGTGATTGCAATT+TGG | - | chr1.3:9226930-9226949 | MS.gene61682:intron | 30.0% | |
| AAAGTGAAACTTCTAGACTA+GGG | + | chr1.3:9225075-9225094 | None:intergenic | 30.0% | |
| AAATTGGTTGAAAACTGTTG+TGG | - | chr1.3:9223264-9223283 | MS.gene61682:intron | 30.0% | |
| AATAGATAAACACATCCACA+AGG | + | chr1.3:9223552-9223571 | None:intergenic | 30.0% | |
| AATTCAGAAGCAATAGCTTA+AGG | + | chr1.3:9225489-9225508 | None:intergenic | 30.0% | |
| AATTGGTTGAAAACTGTTGT+GGG | - | chr1.3:9223265-9223284 | MS.gene61682:intron | 30.0% | |
| ACATAGTTTCTGATGCATAT+GGG | - | chr1.3:9225277-9225296 | MS.gene61682:intron | 30.0% | |
| AGTAACTAATTGTGTGATTG+TGG | - | chr1.3:9224348-9224367 | MS.gene61682:intron | 30.0% | |
| ATCCCTTCACAAATTTCTTA+TGG | + | chr1.3:9225592-9225611 | None:intergenic | 30.0% | |
| CAAATTTGCAATGCATTATG+GGG | - | chr1.3:9227758-9227777 | MS.gene61682:intron | 30.0% | |
| CAAGTAAACGGTATTAAACA+TGG | - | chr1.3:9225019-9225038 | MS.gene61682:intron | 30.0% | |
| CACCATAAGAAATTTGTGAA+GGG | - | chr1.3:9225587-9225606 | MS.gene61682:intron | 30.0% | |
| CATAAATTATAAAGGCAAGC+AGG | + | chr1.3:9226600-9226619 | None:intergenic | 30.0% | |
| CATCACATATAGCAGTTATA+GGG | + | chr1.3:9226288-9226307 | None:intergenic | 30.0% | |
| CTAGATGAAGCTTGATAAAT+TGG | - | chr1.3:9223248-9223267 | MS.gene61682:intron | 30.0% | |
| CTGCTTGCCTTTATAATTTA+TGG | - | chr1.3:9226598-9226617 | MS.gene61682:intron | 30.0% | |
| GCTTAGATTGTTAGAAATCT+TGG | - | chr1.3:9224545-9224564 | MS.gene61682:intron | 30.0% | |
| GGAAATAGAAGAAAAGAAAG+TGG | + | chr1.3:9225373-9225392 | None:intergenic | 30.0% | |
| GTAACTAATTGTGTGATTGT+GGG | - | chr1.3:9224349-9224368 | MS.gene61682:intron | 30.0% | |
| TAAAGTGAAACTTCTAGACT+AGG | + | chr1.3:9225076-9225095 | None:intergenic | 30.0% | |
| TACATAGTTTCTGATGCATA+TGG | - | chr1.3:9225276-9225295 | MS.gene61682:intron | 30.0% | |
| TAGAAAAAACACCTAGATCA+AGG | + | chr1.3:9225420-9225439 | None:intergenic | 30.0% | |
| TCATTGAATGGAATTCATGT+GGG | - | chr1.3:9226039-9226058 | MS.gene61682:intron | 30.0% | |
| TCTCCAATTTAGTGTTTGTA+TGG | + | chr1.3:9227991-9228010 | None:intergenic | 30.0% | |
| TGGATGTGTTTATCTATTGA+CGG | - | chr1.3:9223554-9223573 | MS.gene61682:intron | 30.0% | |
| TGTTTATCTATTGACGGAAA+TGG | - | chr1.3:9223560-9223579 | MS.gene61682:intron | 30.0% | |
| TTAACAGGGTATATGACTAA+TGG | - | chr1.3:9224975-9224994 | MS.gene61682:intron | 30.0% | |
| TTAATACCGTTTACTTGTGT+GGG | + | chr1.3:9225016-9225035 | None:intergenic | 30.0% | |
| TTATTAGAAAATGCCCAAGA+GGG | + | chr1.3:9226563-9226582 | None:intergenic | 30.0% | |
| TTCATTGAATGGAATTCATG+TGG | - | chr1.3:9226038-9226057 | MS.gene61682:intron | 30.0% | |
| TTGGATGCAGTTTAGATTTA+GGG | - | chr1.3:9225343-9225362 | MS.gene61682:intron | 30.0% | |
| TTGTAGATCCAAAGAAAAAC+TGG | - | chr1.3:9222837-9222856 | MS.gene61682:CDS | 30.0% | |
| TTTAATACCGTTTACTTGTG+TGG | + | chr1.3:9225017-9225036 | None:intergenic | 30.0% | |
| TTTACAGCACCAAAAAAATG+TGG | + | chr1.3:9226537-9226556 | None:intergenic | 30.0% | |
| TTTATTAGAAAATGCCCAAG+AGG | + | chr1.3:9226564-9226583 | None:intergenic | 30.0% | |
| ! | ACTATTGTGGTAGAATGTTT+TGG | - | chr1.3:9226467-9226486 | MS.gene61682:intron | 30.0% |
| ! | AGCTTTGATGAATCCTTATA+TGG | - | chr1.3:9226510-9226529 | MS.gene61682:intron | 30.0% |
| ! | ATAAAACAAGGCACTTACAA+AGG | + | chr1.3:9224294-9224313 | None:intergenic | 30.0% |
| ! | CTTGGGCATTTTCTAATAAA+TGG | - | chr1.3:9226564-9226583 | MS.gene61682:intron | 30.0% |
| ! | GATTTTCTGTGAACATACTT+TGG | - | chr1.3:9224074-9224093 | MS.gene61682:intron | 30.0% |
| ! | GGTAAAATTTGAAGGGTTTT+TGG | + | chr1.3:9225053-9225072 | None:intergenic | 30.0% |
| ! | TAATTAAGCCTATTTCTCCA+CGG | - | chr1.3:9228017-9228036 | MS.gene61682:CDS | 30.0% |
| ! | TCATTTTGCTTTCTCCAATT+TGG | - | chr1.3:9223861-9223880 | MS.gene61682:CDS | 30.0% |
| ! | TCCAATTTGGAGGTATAAAA+AGG | - | chr1.3:9223874-9223893 | MS.gene61682:CDS | 30.0% |
| ! | TCCTTTTTATACCTCCAAAT+TGG | + | chr1.3:9223878-9223897 | None:intergenic | 30.0% |
| ! | TGACTTGGGTTTAGTAATTA+CGG | + | chr1.3:9226844-9226863 | None:intergenic | 30.0% |
| ! | TTACGATTTGGATATTAAGG+AGG | - | chr1.3:9223027-9223046 | MS.gene61682:intron | 30.0% |
| ! | TTCATATTTGCTAGAGTAGA+TGG | - | chr1.3:9224694-9224713 | MS.gene61682:intron | 30.0% |
| ! | TTTAGTAGAACTTTTGCACA+TGG | - | chr1.3:9225317-9225336 | MS.gene61682:intron | 30.0% |
| !! | ATATTAAGGAGGCTTTGAAT+CGG | - | chr1.3:9223038-9223057 | MS.gene61682:intron | 30.0% |
| !! | TTTGGTTGATGATGAAATCT+TGG | - | chr1.3:9226485-9226504 | MS.gene61682:intron | 30.0% |
| !!! | CACTGATTTTATATTCGAAG+GGG | + | chr1.3:9227027-9227046 | None:intergenic | 30.0% |
| !!! | GAAGCTATTTTGATTGGAAT+TGG | - | chr1.3:9226427-9226446 | MS.gene61682:intron | 30.0% |
| !!! | GCACTGATTTTATATTCGAA+GGG | + | chr1.3:9227028-9227047 | None:intergenic | 30.0% |
| !!! | TGCACTGATTTTATATTCGA+AGG | + | chr1.3:9227029-9227048 | None:intergenic | 30.0% |
| AAAGAGTGAGTGCTAAAAAG+AGG | + | chr1.3:9226020-9226039 | None:intergenic | 35.0% | |
| AAAGATGGAGTGATTGTTCA+AGG | - | chr1.3:9226731-9226750 | MS.gene61682:intron | 35.0% | |
| AAATCTATAGAAGCTACCAC+AGG | - | chr1.3:9227181-9227200 | MS.gene61682:intron | 35.0% | |
| AAGACAATCAAGACAAGCAA+AGG | + | chr1.3:9224487-9224506 | None:intergenic | 35.0% | |
| AAGAGTGAGTGCTAAAAAGA+GGG | + | chr1.3:9226019-9226038 | None:intergenic | 35.0% | |
| AAGTGAAACTTCTAGACTAG+GGG | + | chr1.3:9225074-9225093 | None:intergenic | 35.0% | |
| AATAGCTTAAGGTCTTCAAC+TGG | + | chr1.3:9225478-9225497 | None:intergenic | 35.0% | |
| AATCTATAGAAGCTACCACA+GGG | - | chr1.3:9227182-9227201 | MS.gene61682:intron | 35.0% | |
| ACATATAGATGGGTCTTAAC+AGG | - | chr1.3:9224960-9224979 | MS.gene61682:intron | 35.0% | |
| AGACTAGGGGTAAAATTTGA+AGG | + | chr1.3:9225061-9225080 | None:intergenic | 35.0% | |
| ATAGCTTAAGGTCTTCAACT+GGG | + | chr1.3:9225477-9225496 | None:intergenic | 35.0% | |
| ATATCTTCTCAACTGAAGTG+AGG | - | chr1.3:9227071-9227090 | MS.gene61682:intron | 35.0% | |
| ATCAAGGATACACACATAGA+TGG | + | chr1.3:9225404-9225423 | None:intergenic | 35.0% | |
| ATGATTGCTATGTCTTTAGC+AGG | + | chr1.3:9225108-9225127 | None:intergenic | 35.0% | |
| CATATAGATGGGTCTTAACA+GGG | - | chr1.3:9224961-9224980 | MS.gene61682:intron | 35.0% | |
| CATTGAATGGAATTCATGTG+GGG | - | chr1.3:9226040-9226059 | MS.gene61682:intron | 35.0% | |
| CCACCATAAGAAATTTGTGA+AGG | - | chr1.3:9225586-9225605 | MS.gene61682:intron | 35.0% | |
| CCTGTCAAAAACAGATACAA+AGG | + | chr1.3:9224229-9224248 | None:intergenic | 35.0% | |
| CCTTCACAAATTTCTTATGG+TGG | + | chr1.3:9225589-9225608 | None:intergenic | 35.0% | |
| CTATTTCATTGTACTGTCAC+TGG | - | chr1.3:9223974-9223993 | MS.gene61682:intron | 35.0% | |
| CTCAGACATGCATTCATATT+TGG | - | chr1.3:9227631-9227650 | MS.gene61682:intron | 35.0% | |
| GAAAACAGAAATACAGACAC+AGG | + | chr1.3:9224752-9224771 | None:intergenic | 35.0% | |
| GAAGGGGATATATATGTGTA+GGG | + | chr1.3:9227011-9227030 | None:intergenic | 35.0% | |
| GAAGTGAGGATCTTAAAGAA+GGG | - | chr1.3:9227085-9227104 | MS.gene61682:intron | 35.0% | |
| GACACATAATTCTACCATAG+TGG | + | chr1.3:9225552-9225571 | None:intergenic | 35.0% | |
| GACTAGGGGTAAAATTTGAA+GGG | + | chr1.3:9225060-9225079 | None:intergenic | 35.0% | |
| GCATCACATATAGCAGTTAT+AGG | + | chr1.3:9226289-9226308 | None:intergenic | 35.0% | |
| GCTAAAGACATAGCAATCAT+GGG | - | chr1.3:9225108-9225127 | MS.gene61682:intron | 35.0% | |
| GTATGATCCGTATTACGATT+TGG | - | chr1.3:9223015-9223034 | MS.gene61682:intron | 35.0% | |
| GTTGACATGGTAAAATAAGC+AGG | + | chr1.3:9227449-9227468 | None:intergenic | 35.0% | |
| GTTGGATGCAGTTTAGATTT+AGG | - | chr1.3:9225342-9225361 | MS.gene61682:intron | 35.0% | |
| TAATACCGTTTACTTGTGTG+GGG | + | chr1.3:9225015-9225034 | None:intergenic | 35.0% | |
| TATGTGTGTATCCTTGATCT+AGG | - | chr1.3:9225406-9225425 | MS.gene61682:intron | 35.0% | |
| TCAACATTCACTCTCTTAGT+AGG | + | chr1.3:9226102-9226121 | None:intergenic | 35.0% | |
| TGAAGTGAGGATCTTAAAGA+AGG | - | chr1.3:9227084-9227103 | MS.gene61682:intron | 35.0% | |
| TGATTGCTATGTCTTTAGCA+GGG | + | chr1.3:9225107-9225126 | None:intergenic | 35.0% | |
| TGCTAAAGACATAGCAATCA+TGG | - | chr1.3:9225107-9225126 | MS.gene61682:intron | 35.0% | |
| TGTGGTAGCTTCTATAGATT+TGG | + | chr1.3:9227182-9227201 | None:intergenic | 35.0% | |
| TTGATGTCTATACAACCACA+AGG | - | chr1.3:9223771-9223790 | MS.gene61682:intron | 35.0% | |
| ! | AACGCATTGATAAGTTGGAT+TGG | - | chr1.3:9225236-9225255 | MS.gene61682:intron | 35.0% |
| ! | ACTAAACCCAAGTCATGTTT+TGG | - | chr1.3:9226849-9226868 | MS.gene61682:intron | 35.0% |
| ! | ACTCTAACGCATTGATAAGT+TGG | - | chr1.3:9225231-9225250 | MS.gene61682:intron | 35.0% |
| ! | AGTTTGGATGGTGATGAAAA+TGG | + | chr1.3:9225874-9225893 | None:intergenic | 35.0% |
| ! | ATTGCAATCACGACATTTTC+AGG | + | chr1.3:9226929-9226948 | None:intergenic | 35.0% |
| ! | CTAAACCCAAGTCATGTTTT+GGG | - | chr1.3:9226850-9226869 | MS.gene61682:intron | 35.0% |
| ! | CTTTTCAACCCACAATTTTC+AGG | - | chr1.3:9226315-9226334 | MS.gene61682:intron | 35.0% |
| ! | GCTATTACACTTAGTTTGGA+TGG | + | chr1.3:9225886-9225905 | None:intergenic | 35.0% |
| ! | TAAACCCAAGTCATGTTTTG+GGG | - | chr1.3:9226851-9226870 | MS.gene61682:intron | 35.0% |
| ! | TTCTCCCCATGTCTTTTAAA+AGG | - | chr1.3:9227798-9227817 | MS.gene61682:intron | 35.0% |
| ! | TTGCAATCACGACATTTTCA+GGG | + | chr1.3:9226928-9226947 | None:intergenic | 35.0% |
| ! | TTTTGCTTTCTCCAATTTGG+AGG | - | chr1.3:9223864-9223883 | MS.gene61682:CDS | 35.0% |
| !! | CAAATTTTTAGAGACTACCG+TGG | + | chr1.3:9228037-9228056 | None:intergenic | 35.0% |
| !! | CAGCAGAGTTTGTTTTCATT+GGG | - | chr1.3:9224858-9224877 | MS.gene61682:intron | 35.0% |
| !!! | CCTTTGTATCTGTTTTTGAC+AGG | - | chr1.3:9224226-9224245 | MS.gene61682:intron | 35.0% |
| !!! | TCGCTTGAAGCTATTTTGAT+TGG | - | chr1.3:9226421-9226440 | MS.gene61682:intron | 35.0% |
| !!! | TTTATTTTGATGAGTGGTGC+TGG | - | chr1.3:9225980-9225999 | MS.gene61682:intron | 35.0% |
| AAAACCTGCCGTATAACCAA+TGG | + | chr1.3:9225632-9225651 | None:intergenic | 40.0% | |
| AAACACCCCAAAACATGACT+TGG | + | chr1.3:9226859-9226878 | None:intergenic | 40.0% | |
| AAACCTCTCTGTTAACCGTA+GGG | + | chr1.3:9227239-9227258 | None:intergenic | 40.0% | |
| AACACCCCAAAACATGACTT+GGG | + | chr1.3:9226858-9226877 | None:intergenic | 40.0% | |
| AACCCTTCCATAAGTGCATT+GGG | - | chr1.3:9226393-9226412 | MS.gene61682:intron | 40.0% | |
| AAGACCCATCTATATGTGCA+GGG | + | chr1.3:9224957-9224976 | None:intergenic | 40.0% | |
| AAGGTAGAGTTAGATCCTCT+GGG | - | chr1.3:9223790-9223809 | MS.gene61682:intron | 40.0% | |
| AATGTAGGACATCCTTCTCA+TGG | + | chr1.3:9228199-9228218 | None:intergenic | 40.0% | |
| AGAGAGGTTTGAGGATTAAC+GGG | - | chr1.3:9227249-9227268 | MS.gene61682:intron | 40.0% | |
| AGAGTGAGTGCTAAAAAGAG+GGG | + | chr1.3:9226018-9226037 | None:intergenic | 40.0% | |
| AGCAAATGCTGTCTCAATTG+TGG | - | chr1.3:9223727-9223746 | MS.gene61682:intron | 40.0% | |
| AGGAAGATACTCATGCTTCA+TGG | + | chr1.3:9223122-9223141 | None:intergenic | 40.0% | |
| AGTGCAGACATAATCTCTAC+AGG | - | chr1.3:9224005-9224024 | MS.gene61682:intron | 40.0% | |
| ATCTTTCTTCCATCTTGGCA+TGG | + | chr1.3:9226959-9226978 | None:intergenic | 40.0% | |
| CAGAGAGGTTTGAGGATTAA+CGG | - | chr1.3:9227248-9227267 | MS.gene61682:intron | 40.0% | |
| CATCCACTTCCTAACCATAA+TGG | - | chr1.3:9228158-9228177 | MS.gene61682:intron | 40.0% | |
| CATTATGGTTAGGAAGTGGA+TGG | + | chr1.3:9228160-9228179 | None:intergenic | 40.0% | |
| CCAATGAAAACAAACTCTGC+TGG | + | chr1.3:9224860-9224879 | None:intergenic | 40.0% | |
| CCTCTTCACCTGAAAATTGT+GGG | + | chr1.3:9226326-9226345 | None:intergenic | 40.0% | |
| CGAAGGGGATATATATGTGT+AGG | + | chr1.3:9227012-9227031 | None:intergenic | 40.0% | |
| GATACTACCCAATGCACTTA+TGG | + | chr1.3:9226403-9226422 | None:intergenic | 40.0% | |
| GCACTCACTCTTTCATTGAA+TGG | - | chr1.3:9226027-9226046 | MS.gene61682:intron | 40.0% | |
| GCTCTATCTTTCTTCCATCT+TGG | + | chr1.3:9226964-9226983 | None:intergenic | 40.0% | |
| GTAGGGATGTATCTCAAACA+GGG | + | chr1.3:9226994-9227013 | None:intergenic | 40.0% | |
| GTGGAATGTCCATTATGGTT+AGG | + | chr1.3:9228170-9228189 | None:intergenic | 40.0% | |
| GTTCTCCTAAGCAGAAAATG+AGG | + | chr1.3:9228123-9228142 | None:intergenic | 40.0% | |
| TAAGACCCATCTATATGTGC+AGG | + | chr1.3:9224958-9224977 | None:intergenic | 40.0% | |
| TAAGGGCAACATATTCTCGT+CGG | - | chr1.3:9227153-9227172 | MS.gene61682:intron | 40.0% | |
| TACCCAATGCACTTATGGAA+GGG | + | chr1.3:9226398-9226417 | None:intergenic | 40.0% | |
| TCCAAACGTCTTCGCAAATA+CGG | - | chr1.3:9222887-9222906 | MS.gene61682:CDS | 40.0% | |
| TGACCACCATTTAACAACAC+TGG | + | chr1.3:9225523-9225542 | None:intergenic | 40.0% | |
| TGTAGGGATGTATCTCAAAC+AGG | + | chr1.3:9226995-9227014 | None:intergenic | 40.0% | |
| TGTCCATTATGGTTAGGAAG+TGG | + | chr1.3:9228164-9228183 | None:intergenic | 40.0% | |
| TTCACGTGGAATGTCCATTA+TGG | + | chr1.3:9228175-9228194 | None:intergenic | 40.0% | |
| TTCTATTAGCGTGCGAAATG+TGG | - | chr1.3:9226784-9226803 | MS.gene61682:CDS | 40.0% | |
| ! | ACTTGCCTCATTTTCTGCTT+AGG | - | chr1.3:9228115-9228134 | MS.gene61682:intron | 40.0% |
| ! | CACTGTCCAGTGTTGTTAAA+TGG | - | chr1.3:9225514-9225533 | MS.gene61682:intron | 40.0% |
| ! | GAACTTTTGCACATGGAAGT+TGG | - | chr1.3:9225324-9225343 | MS.gene61682:intron | 40.0% |
| ! | GATTAACGGGTGAAAAAGAG+AGG | - | chr1.3:9227262-9227281 | MS.gene61682:intron | 40.0% |
| ! | GTGTTGTTAAATGGTGGTCA+TGG | - | chr1.3:9225523-9225542 | MS.gene61682:intron | 40.0% |
| ! | TGTCCAGTGTTGTTAAATGG+TGG | - | chr1.3:9225517-9225536 | MS.gene61682:intron | 40.0% |
| ! | TTGGTTATACGGCAGGTTTT+TGG | - | chr1.3:9225632-9225651 | MS.gene61682:intron | 40.0% |
| !! | CCAGCAGAGTTTGTTTTCAT+TGG | - | chr1.3:9224857-9224876 | MS.gene61682:intron | 40.0% |
| !! | GAAAGTGTCAGTGCTACATA+GGG | - | chr1.3:9223503-9223522 | MS.gene61682:intron | 40.0% |
| !! | TGAAAGTGTCAGTGCTACAT+AGG | - | chr1.3:9223502-9223521 | MS.gene61682:intron | 40.0% |
| !! | TGTAGCACTGACACTTTCAA+TGG | + | chr1.3:9223501-9223520 | None:intergenic | 40.0% |
| !!! | AAGTCATGTTTTGGGGTGTT+TGG | - | chr1.3:9226858-9226877 | MS.gene61682:intron | 40.0% |
| !!! | CCACAATTTTCAGGTGAAGA+GGG | - | chr1.3:9226324-9226343 | MS.gene61682:intron | 40.0% |
| AAACCAACCTGAAGATCCTC+AGG | + | chr1.3:9223142-9223161 | None:intergenic | 45.0% | |
| AACTGGGAGTGGTTCTCTAT+GGG | + | chr1.3:9225461-9225480 | None:intergenic | 45.0% | |
| ACAACAGTACACTGCACAAG+TGG | + | chr1.3:9224054-9224073 | None:intergenic | 45.0% | |
| ACAGCTAAACTCAACCCTGT+TGG | + | chr1.3:9227535-9227554 | None:intergenic | 45.0% | |
| ACAGGGTTGAGTTTAGCTGT+AGG | - | chr1.3:9227535-9227554 | MS.gene61682:intron | 45.0% | |
| ACATTAGCAAAGCCATCCAC+CGG | - | chr1.3:9228214-9228233 | MS.gene61682:CDS | 45.0% | |
| ACCGTATTTGCGAAGACGTT+TGG | + | chr1.3:9222891-9222910 | None:intergenic | 45.0% | |
| ACGGTTAACAGAGAGGTTTG+AGG | - | chr1.3:9227240-9227259 | MS.gene61682:intron | 45.0% | |
| AGAGACTACCGTGGAGAAAT+AGG | + | chr1.3:9228028-9228047 | None:intergenic | 45.0% | |
| AGGATACACACATAGATGGC+AGG | + | chr1.3:9225400-9225419 | None:intergenic | 45.0% | |
| AGGCAATGCAAACACCATTC+AGG | - | chr1.3:9224246-9224265 | MS.gene61682:intron | 45.0% | |
| ATCCTTCTCATGGATTCACG+TGG | + | chr1.3:9228189-9228208 | None:intergenic | 45.0% | |
| ATGGAAGGGTTCGTTGATAC+AGG | + | chr1.3:9226384-9226403 | None:intergenic | 45.0% | |
| ATGGCAGTTGATTGTGAGGA+AGG | - | chr1.3:9225133-9225152 | MS.gene61682:intron | 45.0% | |
| ATGTGCCCCACACAAGTAAA+CGG | - | chr1.3:9225007-9225026 | MS.gene61682:intron | 45.0% | |
| ATTGTGAGGAAGGATTCCAG+AGG | - | chr1.3:9225143-9225162 | MS.gene61682:intron | 45.0% | |
| CAAACCTCTCTGTTAACCGT+AGG | + | chr1.3:9227240-9227259 | None:intergenic | 45.0% | |
| CAAAGGTCAGCATATCCTGA+AGG | + | chr1.3:9224277-9224296 | None:intergenic | 45.0% | |
| CAAGGTAGAGTTAGATCCTC+TGG | - | chr1.3:9223789-9223808 | MS.gene61682:intron | 45.0% | |
| CAGGGTTGAGTTTAGCTGTA+GGG | - | chr1.3:9227536-9227555 | MS.gene61682:intron | 45.0% | |
| CATGTCAACCTGCATACTCA+CGG | - | chr1.3:9227460-9227479 | MS.gene61682:intron | 45.0% | |
| CCCTCTTCACCTGAAAATTG+TGG | + | chr1.3:9226327-9226346 | None:intergenic | 45.0% | |
| CTACCCAATGCACTTATGGA+AGG | + | chr1.3:9226399-9226418 | None:intergenic | 45.0% | |
| GAACCCTTCCATAAGTGCAT+TGG | - | chr1.3:9226392-9226411 | MS.gene61682:intron | 45.0% | |
| GAAGCATGAGTATCTTCCTG+AGG | - | chr1.3:9223123-9223142 | MS.gene61682:intron | 45.0% | |
| GACATAGCAATCATGGGTCA+TGG | - | chr1.3:9225114-9225133 | MS.gene61682:intron | 45.0% | |
| GAGGATCTAACTCTACCTTG+TGG | + | chr1.3:9223789-9223808 | None:intergenic | 45.0% | |
| GAGTGAGTGCTAAAAAGAGG+GGG | + | chr1.3:9226017-9226036 | None:intergenic | 45.0% | |
| GATACACACATAGATGGCAG+GGG | + | chr1.3:9225398-9225417 | None:intergenic | 45.0% | |
| GGATACACACATAGATGGCA+GGG | + | chr1.3:9225399-9225418 | None:intergenic | 45.0% | |
| GTATCTTCCTGAGGATCTTC+AGG | - | chr1.3:9223132-9223151 | MS.gene61682:intron | 45.0% | |
| GTGCTGTAAACTTCCCTCTT+GGG | - | chr1.3:9226547-9226566 | MS.gene61682:intron | 45.0% | |
| TGGAAGGGTTCGTTGATACA+GGG | + | chr1.3:9226383-9226402 | None:intergenic | 45.0% | |
| TGTGGACATATAAGAGCGAC+CGG | + | chr1.3:9228236-9228255 | None:intergenic | 45.0% | |
| TGTGGGGCTCATTTGTAGAA+TGG | - | chr1.3:9226056-9226075 | MS.gene61682:intron | 45.0% | |
| TTAAGGTCTTCAACTGGGAG+TGG | + | chr1.3:9225472-9225491 | None:intergenic | 45.0% | |
| TTCCACGTGAATCCATGAGA+AGG | - | chr1.3:9228184-9228203 | MS.gene61682:CDS | 45.0% | |
| ! | GCAGCGAACCAGTTTTTCTT+TGG | + | chr1.3:9222848-9222867 | None:intergenic | 45.0% |
| ! | GTGGATGGCTTTGCTAATGT+AGG | + | chr1.3:9228214-9228233 | None:intergenic | 45.0% |
| ! | TGCATTATGGGGCACTTCAA+TGG | - | chr1.3:9227769-9227788 | MS.gene61682:intron | 45.0% |
| ! | TTTGAATCGGCTTCCAAAGG+AGG | - | chr1.3:9223051-9223070 | MS.gene61682:intron | 45.0% |
| !! | ATTTGGTGTCCATGCCAAGA+TGG | - | chr1.3:9226947-9226966 | MS.gene61682:intron | 45.0% |
| !! | TGAGGATCTTCAGGTTGGTT+TGG | - | chr1.3:9223141-9223160 | MS.gene61682:intron | 45.0% |
| !!! | CCCACAATTTTCAGGTGAAG+AGG | - | chr1.3:9226323-9226342 | MS.gene61682:intron | 45.0% |
| !!! | AACATTTTTATAAATAAAAA+AGG | + | chr1.3:9224798-9224817 | None:intergenic | 5.0% |
| !!! | TCAATTTTTTTTTTTTTTTT+TGG | + | chr1.3:9228090-9228109 | None:intergenic | 5.0% |
| ACATTCCACCGTGAGTATGC+AGG | + | chr1.3:9227471-9227490 | None:intergenic | 50.0% | |
| ACCATTCAGGAGCTACCTTC+AGG | - | chr1.3:9224259-9224278 | MS.gene61682:intron | 50.0% | |
| ACTGGACACTGACAGCATCA+TGG | - | chr1.3:9225673-9225692 | MS.gene61682:intron | 50.0% | |
| ACTTGTGTGGGGCACATATG+TGG | + | chr1.3:9225004-9225023 | None:intergenic | 50.0% | |
| AGACACGGACAGGTTTACGA+GGG | - | chr1.3:9223405-9223424 | MS.gene61682:intron | 50.0% | |
| ATATAAGAGCGACCGGTGGA+TGG | + | chr1.3:9228229-9228248 | None:intergenic | 50.0% | |
| CAACTGGGAGTGGTTCTCTA+TGG | + | chr1.3:9225462-9225481 | None:intergenic | 50.0% | |
| CGAGCATCAACAACCTCCTT+TGG | + | chr1.3:9223067-9223086 | None:intergenic | 50.0% | |
| CTCAAGGGTTGTTCAACCTC+TGG | + | chr1.3:9225162-9225181 | None:intergenic | 50.0% | |
| CTCCACAGTACTCAGCTCAA+GGG | + | chr1.3:9225177-9225196 | None:intergenic | 50.0% | |
| CTGCCGTATAACCAATGGCA+CGG | + | chr1.3:9225627-9225646 | None:intergenic | 50.0% | |
| CTGGTATCATGCCCCAACAT+CGG | + | chr1.3:9225202-9225221 | None:intergenic | 50.0% | |
| CTTCCTGAGGATCTTCAGGT+TGG | - | chr1.3:9223136-9223155 | MS.gene61682:intron | 50.0% | |
| GCGTTAGAGTCCATATCAGC+TGG | + | chr1.3:9225221-9225240 | None:intergenic | 50.0% | |
| GCTATGTCTTTAGCAGGGCT+TGG | + | chr1.3:9225102-9225121 | None:intergenic | 50.0% | |
| GGAAGGGTTCGTTGATACAG+GGG | + | chr1.3:9226382-9226401 | None:intergenic | 50.0% | |
| GGGCATGATACCAGCTGATA+TGG | - | chr1.3:9225208-9225227 | MS.gene61682:intron | 50.0% | |
| GGTCATGGCAGTTGATTGTG+AGG | - | chr1.3:9225129-9225148 | MS.gene61682:intron | 50.0% | |
| TACTGTGGAGACCCGATGTT+GGG | - | chr1.3:9225187-9225206 | MS.gene61682:intron | 50.0% | |
| TCCTGAAGGTAGCTCCTGAA+TGG | + | chr1.3:9224263-9224282 | None:intergenic | 50.0% | |
| TCTCCACAGTACTCAGCTCA+AGG | + | chr1.3:9225178-9225197 | None:intergenic | 50.0% | |
| TGCCGTATAACCAATGGCAC+GGG | + | chr1.3:9225626-9225645 | None:intergenic | 50.0% | |
| TGGGCCCTGCACATATAGAT+GGG | - | chr1.3:9224950-9224969 | MS.gene61682:intron | 50.0% | |
| TGGTATCATGCCCCAACATC+GGG | + | chr1.3:9225201-9225220 | None:intergenic | 50.0% | |
| TGTTAACCGTAGGGCAGCAA+TGG | + | chr1.3:9227230-9227249 | None:intergenic | 50.0% | |
| TTGGGCCCTGCACATATAGA+TGG | - | chr1.3:9224949-9224968 | MS.gene61682:intron | 50.0% | |
| TTGTGAAGGGATTCCCGTCA+TGG | - | chr1.3:9225600-9225619 | MS.gene61682:intron | 50.0% | |
| ! | AACCCTTGAGCTGAGTACTG+TGG | - | chr1.3:9225172-9225191 | MS.gene61682:intron | 50.0% |
| ! | CGTGAGTATGCAGGTTGACA+TGG | + | chr1.3:9227462-9227481 | None:intergenic | 50.0% |
| ! | GGTGCTGTAAACTTCCCTCT+TGG | - | chr1.3:9226546-9226565 | MS.gene61682:intron | 50.0% |
| !! | GGCTTTGAATCGGCTTCCAA+AGG | - | chr1.3:9223048-9223067 | MS.gene61682:intron | 50.0% |
| ACATGGGCTCGACACAGACA+CGG | - | chr1.3:9223390-9223409 | MS.gene61682:intron | 55.0% | |
| ACGAGCAGAGCGTGAAGCAT+TGG | - | chr1.3:9226348-9226367 | MS.gene61682:intron | 55.0% | |
| ACTGTGGAGACCCGATGTTG+GGG | - | chr1.3:9225188-9225207 | MS.gene61682:intron | 55.0% | |
| ATGCCACCATTGCTGCCCTA+CGG | - | chr1.3:9227221-9227240 | MS.gene61682:intron | 55.0% | |
| CACACATAGATGGCAGGGGA+TGG | + | chr1.3:9225394-9225413 | None:intergenic | 55.0% | |
| CACGTGTGTCAGTGTCGTGT+CGG | - | chr1.3:9223454-9223473 | MS.gene61682:intron | 55.0% | |
| CAGACACGGACAGGTTTACG+AGG | - | chr1.3:9223404-9223423 | MS.gene61682:intron | 55.0% | |
| CTGCCCTACGGTTAACAGAG+AGG | - | chr1.3:9227233-9227252 | MS.gene61682:intron | 55.0% | |
| GGACATATAAGAGCGACCGG+TGG | + | chr1.3:9228233-9228252 | None:intergenic | 55.0% | |
| GGTGGTCATGGTAGCCACTA+TGG | - | chr1.3:9225535-9225554 | MS.gene61682:intron | 55.0% | |
| GTACTGTGGAGACCCGATGT+TGG | - | chr1.3:9225186-9225205 | MS.gene61682:intron | 55.0% | |
| GTCAACCTGCATACTCACGG+TGG | - | chr1.3:9227463-9227482 | MS.gene61682:intron | 55.0% | |
| TAACCGTAGGGCAGCAATGG+TGG | + | chr1.3:9227227-9227246 | None:intergenic | 55.0% | |
| TCAGTGTCCAGTGCTGTCGT+TGG | + | chr1.3:9225665-9225684 | None:intergenic | 55.0% | |
| ! | CGAGCAGAGCGTGAAGCATT+GGG | - | chr1.3:9226349-9226368 | MS.gene61682:intron | 55.0% |
| ! | CGTGCCATTGGTTATACGGC+AGG | - | chr1.3:9225625-9225644 | MS.gene61682:intron | 55.0% |
| ! | GGCCCGTGCCATTGGTTATA+CGG | - | chr1.3:9225621-9225640 | MS.gene61682:intron | 55.0% |
| ACCAATGGCACGGGCCATGA+CGG | + | chr1.3:9225617-9225636 | None:intergenic | 60.0% | |
| ACCACAGGGTTACGAGCAGC+AGG | - | chr1.3:9227196-9227215 | MS.gene61682:intron | 60.0% | |
| CCACAGGGTTACGAGCAGCA+GGG | - | chr1.3:9227197-9227216 | MS.gene61682:intron | 60.0% | |
| CCAGTGCTGTCGTTGGCAGA+AGG | + | chr1.3:9225658-9225677 | None:intergenic | 60.0% | |
| CCTTCTGCCAACGACAGCAC+TGG | - | chr1.3:9225655-9225674 | MS.gene61682:intron | 60.0% | |
| ! | GTGTCAGTGTCGTGTCGGTG+TGG | - | chr1.3:9223459-9223478 | MS.gene61682:intron | 60.0% |
| !! | GCAGAGCGTGAAGCATTGGG+AGG | - | chr1.3:9226352-9226371 | MS.gene61682:intron | 60.0% |
| CCAATGGCACGGGCCATGAC+GGG | + | chr1.3:9225616-9225635 | None:intergenic | 65.0% | |
| CCCTGCTGCTCGTAACCCTG+TGG | + | chr1.3:9227200-9227219 | None:intergenic | 65.0% | |
| GGCTCGACACAGACACGGAC+AGG | - | chr1.3:9223395-9223414 | MS.gene61682:intron | 65.0% | |
| ! | TGTCGTGTCGGTGTGGACGC+TGG | - | chr1.3:9223466-9223485 | MS.gene61682:intron | 65.0% |
| CCCGTCATGGCCCGTGCCAT+TGG | - | chr1.3:9225613-9225632 | MS.gene61682:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 9222815 | 9228263 | 9222815 | ID=MS.gene61682 |
| chr1.3 | mRNA | 9222815 | 9228263 | 9222815 | ID=MS.gene61682.t1;Parent=MS.gene61682 |
| chr1.3 | exon | 9228170 | 9228263 | 9228170 | ID=MS.gene61682.t1.exon1;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9228170 | 9228263 | 9228170 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| chr1.3 | exon | 9227925 | 9228082 | 9227925 | ID=MS.gene61682.t1.exon2;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9227925 | 9228082 | 9227925 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| chr1.3 | exon | 9226783 | 9226830 | 9226783 | ID=MS.gene61682.t1.exon3;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9226783 | 9226830 | 9226783 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| chr1.3 | exon | 9224705 | 9224741 | 9224705 | ID=MS.gene61682.t1.exon4;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9224705 | 9224741 | 9224705 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| chr1.3 | exon | 9223824 | 9223989 | 9223824 | ID=MS.gene61682.t1.exon5;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9223824 | 9223989 | 9223824 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| chr1.3 | exon | 9222815 | 9222941 | 9222815 | ID=MS.gene61682.t1.exon6;Parent=MS.gene61682.t1 |
| chr1.3 | CDS | 9222815 | 9222941 | 9222815 | ID=cds.MS.gene61682.t1;Parent=MS.gene61682.t1 |
| Gene Sequence |
| Protein sequence |
