Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51557.t1 | XP_003588718.1 | 100 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 2.00E-55 | 225.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51557.t1 | F4JWS8 | 75.2 | 121 | 30 | 0 | 1 | 121 | 1 | 121 | 1.2e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51557.t1 | B7FGY5 | 100.0 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 1.4e-55 | 225.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene51557 | 0.820009 | 8.60E-53 | -1.69E-46 |
| MS.gene049166 | MS.gene51557 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene04917 | MS.gene51557 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene049822 | MS.gene51557 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene51557 | 0.847882 | 8.73E-60 | -1.69E-46 |
| MS.gene049861 | MS.gene51557 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene04991 | MS.gene51557 | -0.80762 | 4.62E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene51557 | 0.858777 | 6.53E-63 | -1.69E-46 |
| MS.gene050288 | MS.gene51557 | 0.851336 | 9.48E-61 | -1.69E-46 |
| MS.gene050317 | MS.gene51557 | 0.854209 | 1.43E-61 | -1.69E-46 |
| MS.gene050320 | MS.gene51557 | 0.82092 | 5.32E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene51557 | 0.819119 | 1.37E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene51557 | 0.824988 | 5.99E-54 | -1.69E-46 |
| MS.gene051063 | MS.gene51557 | 0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene051184 | MS.gene51557 | 0.81556 | 8.68E-52 | -1.69E-46 |
| MS.gene051245 | MS.gene51557 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene51557 | 0.807608 | 4.65E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene51557 | 0.820224 | 7.68E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene51557 | 0.80218 | 6.34E-49 | -1.69E-46 |
| MS.gene051748 | MS.gene51557 | 0.813676 | 2.27E-51 | -1.69E-46 |
| MS.gene051756 | MS.gene51557 | 0.864392 | 1.26E-64 | -1.69E-46 |
| MS.gene051757 | MS.gene51557 | 0.87319 | 1.78E-67 | -1.69E-46 |
| MS.gene051831 | MS.gene51557 | 0.833918 | 4.05E-56 | -1.69E-46 |
| MS.gene051903 | MS.gene51557 | 0.829832 | 4.13E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene51557 | 0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene51557 | 0.815707 | 8.05E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene51557 | 0.810185 | 1.31E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene51557 | 0.807659 | 4.54E-50 | -1.69E-46 |
| MS.gene053340 | MS.gene51557 | 0.802834 | 4.65E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene51557 | 0.840596 | 7.91E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene51557 | -0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene05469 | MS.gene51557 | 0.817416 | 3.34E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene51557 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene51557 | 0.812775 | 3.58E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene51557 | 0.851854 | 6.77E-61 | -1.69E-46 |
| MS.gene056638 | MS.gene51557 | 0.820911 | 5.34E-53 | -1.69E-46 |
| MS.gene056752 | MS.gene51557 | 0.810931 | 9.02E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene51557 | 0.847839 | 8.97E-60 | -1.69E-46 |
| MS.gene056849 | MS.gene51557 | 0.850018 | 2.23E-60 | -1.69E-46 |
| MS.gene056986 | MS.gene51557 | 0.837269 | 5.74E-57 | -1.69E-46 |
| MS.gene056992 | MS.gene51557 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene057094 | MS.gene51557 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene057140 | MS.gene51557 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene057234 | MS.gene51557 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene51557 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene51557 | -0.816424 | 5.57E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene51557 | 0.847201 | 1.34E-59 | -1.69E-46 |
| MS.gene058238 | MS.gene51557 | 0.864363 | 1.28E-64 | -1.69E-46 |
| MS.gene058654 | MS.gene51557 | 0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene058758 | MS.gene51557 | 0.80657 | 7.71E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene51557 | 0.815196 | 1.05E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene51557 | 0.842692 | 2.21E-58 | -1.69E-46 |
| MS.gene059360 | MS.gene51557 | 0.845461 | 4.00E-59 | -1.69E-46 |
| MS.gene06001 | MS.gene51557 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene51557 | 0.839104 | 1.93E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene51557 | 0.864014 | 1.65E-64 | -1.69E-46 |
| MS.gene060297 | MS.gene51557 | 0.808559 | 2.92E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene51557 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene060869 | MS.gene51557 | 0.837167 | 6.10E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene51557 | 0.819237 | 1.29E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61682 | MS.gene51557 | PPI |
| MS.gene51557 | MS.gene015970 | PPI |
| MS.gene51557 | MS.gene60265 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51557.t1 | MTR_1g011880 | 100.000 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 3.15e-79 | 233 |
| MS.gene51557.t1 | MTR_1g011880 | 100.000 | 101 | 0 | 0 | 1 | 101 | 1 | 101 | 2.73e-71 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51557.t1 | AT5G25450 | 74.590 | 122 | 31 | 0 | 1 | 122 | 1 | 122 | 8.97e-63 | 191 |
| MS.gene51557.t1 | AT4G32470 | 76.106 | 113 | 27 | 0 | 1 | 113 | 1 | 113 | 5.66e-60 | 184 |
| MS.gene51557.t1 | AT4G32470 | 77.000 | 100 | 23 | 0 | 1 | 100 | 1 | 100 | 1.34e-53 | 167 |
| MS.gene51557.t1 | AT5G25450 | 63.934 | 122 | 28 | 1 | 1 | 122 | 1 | 106 | 1.12e-47 | 152 |
| MS.gene51557.t1 | AT5G25450 | 75.294 | 85 | 21 | 0 | 1 | 85 | 1 | 85 | 4.31e-43 | 140 |
Find 52 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTAGCTTCTATAGATT+TGG | 0.270022 | 1.4:+8723908 | None:intergenic |
| GTATTACGATTTGGATATTA+AGG | 0.274133 | 1.4:-8728058 | MS.gene51557:CDS |
| AAACAAGACAGTGATTAATA+AGG | 0.287731 | 1.4:-8723952 | MS.gene51557:CDS |
| ACCGTATTTGCGAAGACGTT+TGG | 0.293147 | 1.4:+8728194 | None:intergenic |
| TTCACGTGGAATGTCTATTA+TGG | 0.303068 | 1.4:+8722915 | None:intergenic |
| GTATCTTCCTGAGGATCTTC+AGG | 0.339636 | 1.4:-8727950 | MS.gene51557:intron |
| GTATGATCCGTATTACGATT+TGG | 0.362212 | 1.4:-8728067 | MS.gene51557:CDS |
| TCCAAACGTCTTCGCAAATA+CGG | 0.376472 | 1.4:-8728195 | MS.gene51557:intron |
| AACAAGACAGTGATTAATAA+GGG | 0.409817 | 1.4:-8723951 | MS.gene51557:CDS |
| CGAGCATCAACAACCTCCTT+TGG | 0.426514 | 1.4:+8728018 | None:intergenic |
| ACCACAGGGTTACGAGCAGC+AGG | 0.439743 | 1.4:-8723891 | MS.gene51557:CDS |
| CGAGCAGAGCGTGAAGCATT+GGG | 0.452428 | 1.4:-8724735 | MS.gene51557:CDS |
| ACGAGCAGAGCGTGAAGCAT+TGG | 0.467463 | 1.4:-8724736 | MS.gene51557:CDS |
| AGGAAGATACTCATGCTTCA+TGG | 0.469418 | 1.4:+8727963 | None:intergenic |
| GTGGAATGTCTATTATGGTT+AGG | 0.469609 | 1.4:+8722920 | None:intergenic |
| TTAATATCCAAATCGTAATA+CGG | 0.475035 | 1.4:+8728060 | None:intergenic |
| GGAATAGCTATTAACTGTTG+TGG | 0.478156 | 1.4:+8722836 | None:intergenic |
| AGGCAATGCAAACACCATTC+AGG | 0.479539 | 1.4:-8726838 | MS.gene51557:CDS |
| TTAAAGAAGGGAAGTATAAG+TGG | 0.492175 | 1.4:-8723990 | MS.gene51557:CDS |
| TGAAGTGAGGATCTTAAAGA+AGG | 0.499292 | 1.4:-8724003 | MS.gene51557:intron |
| ACCATTCAGGAGCTACCTTC+AGG | 0.525111 | 1.4:-8726825 | MS.gene51557:CDS |
| TCCTGAAGGTAGCTCCTGAA+TGG | 0.529425 | 1.4:+8726824 | None:intergenic |
| TGTCTATTATGGTTAGGAAG+TGG | 0.530262 | 1.4:+8722926 | None:intergenic |
| GGCTTTGAATCGGCTTCCAA+AGG | 0.532273 | 1.4:-8728034 | MS.gene51557:CDS |
| ATATTAAGGAGGCTTTGAAT+CGG | 0.539685 | 1.4:-8728044 | MS.gene51557:CDS |
| AAACCAACCTGAAGATCCTC+AGG | 0.545207 | 1.4:+8727943 | None:intergenic |
| AATGTAGGACATCCTTCTCA+TGG | 0.553249 | 1.4:+8722891 | None:intergenic |
| ATGCCACCATTGCTGCCCTA+CGG | 0.556597 | 1.4:-8723866 | MS.gene51557:CDS |
| TATTATGGTTAGGAAGTGGA+TGG | 0.560543 | 1.4:+8722930 | None:intergenic |
| TTTGAATCGGCTTCCAAAGG+AGG | 0.563776 | 1.4:-8728031 | MS.gene51557:CDS |
| TGTTAACCGTAGGGCAGCAA+TGG | 0.575960 | 1.4:+8723860 | None:intergenic |
| AAATCTATAGAAGCTACCAC+AGG | 0.576803 | 1.4:-8723906 | MS.gene51557:CDS |
| CGAACCTCTCTGTTAACCGT+AGG | 0.577545 | 1.4:+8723850 | None:intergenic |
| TAACCGTAGGGCAGCAATGG+TGG | 0.583879 | 1.4:+8723863 | None:intergenic |
| TTACGATTTGGATATTAAGG+AGG | 0.584001 | 1.4:-8728055 | MS.gene51557:CDS |
| GTGGATGGCTTTGCTAATGT+AGG | 0.598569 | 1.4:+8722876 | None:intergenic |
| GAAGTGAGGATCTTAAAGAA+GGG | 0.602165 | 1.4:-8724002 | MS.gene51557:intron |
| ATACAAGAGCGACCGGTGGA+TGG | 0.605752 | 1.4:+8722861 | None:intergenic |
| TAAGGGCAACATATTCTCGT+CGG | 0.612643 | 1.4:-8723934 | MS.gene51557:CDS |
| GAACCTCTCTGTTAACCGTA+GGG | 0.612997 | 1.4:+8723851 | None:intergenic |
| CTGCCCTACGGTTAACAGAG+AGG | 0.613622 | 1.4:-8723854 | MS.gene51557:intron |
| ACATTAGCAAAGCCATCCAC+CGG | 0.617354 | 1.4:-8722873 | MS.gene51557:CDS |
| TGTGGACATACAAGAGCGAC+CGG | 0.619301 | 1.4:+8722854 | None:intergenic |
| CAAAGGTCAGCATATCCTGA+AGG | 0.627878 | 1.4:+8726810 | None:intergenic |
| TTCCACGTGAATCCATGAGA+AGG | 0.637394 | 1.4:-8722903 | MS.gene51557:CDS |
| GCAGAGCGTGAAGCATTGGG+AGG | 0.668632 | 1.4:-8724732 | MS.gene51557:intron |
| ATCCTTCTCATGGATTCACG+TGG | 0.670042 | 1.4:+8722901 | None:intergenic |
| CCCTGCTGCTCGTAACCCTG+TGG | 0.673021 | 1.4:+8723890 | None:intergenic |
| GAAGCATGAGTATCTTCCTG+AGG | 0.684541 | 1.4:-8727959 | MS.gene51557:CDS |
| AATCTATAGAAGCTACCACA+GGG | 0.688978 | 1.4:-8723905 | MS.gene51557:CDS |
| CCACAGGGTTACGAGCAGCA+GGG | 0.702097 | 1.4:-8723890 | MS.gene51557:CDS |
| GGACATACAAGAGCGACCGG+TGG | 0.707165 | 1.4:+8722857 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATGTTTAATAAAAAA+AGG | + | chr1.4:8724458-8724477 | None:intergenic | 10.0% |
| !!! | TCTTATTTTAATTTAAACTA+GGG | - | chr1.4:8723848-8723867 | MS.gene51557:intron | 10.0% |
| !!! | TTCTTATTTTAATTTAAACT+AGG | - | chr1.4:8723847-8723866 | MS.gene51557:intron | 10.0% |
| !!! | TTTTGTATAATTTTCAATTT+TGG | - | chr1.4:8727936-8727955 | MS.gene51557:intron | 10.0% |
| !! | AAATACAATTTCACAAATTA+GGG | + | chr1.4:8722992-8723011 | None:intergenic | 15.0% |
| !! | ATTTAACATGTTAACTAATA+GGG | - | chr1.4:8725731-8725750 | MS.gene51557:intron | 15.0% |
| !! | TATTTAACATGTTAACTAAT+AGG | - | chr1.4:8725730-8725749 | MS.gene51557:intron | 15.0% |
| !!! | AATTTTCAATTTTGGAAATA+TGG | - | chr1.4:8727944-8727963 | MS.gene51557:intron | 15.0% |
| !!! | CAATATTTTTGTAATTCATT+GGG | - | chr1.4:8724960-8724979 | MS.gene51557:intron | 15.0% |
| !!! | CTTTTAAAATTAATTTTGAC+TGG | + | chr1.4:8727737-8727756 | None:intergenic | 15.0% |
| !!! | GAAATGATTTTATAATTGTT+TGG | + | chr1.4:8725848-8725867 | None:intergenic | 15.0% |
| !!! | TATACAAATCTTTGAAAATA+AGG | + | chr1.4:8724852-8724871 | None:intergenic | 15.0% |
| !!! | TGTTTTGATATAACATTATA+TGG | - | chr1.4:8724407-8724426 | MS.gene51557:intron | 15.0% |
| !!! | TTATTTTCAAAGATTTGTAT+AGG | - | chr1.4:8724851-8724870 | MS.gene51557:intron | 15.0% |
| !! | AAAAAACGAAATGAAGATTT+AGG | + | chr1.4:8722957-8722976 | None:intergenic | 20.0% |
| !! | AACAATAACATATGAAACAT+GGG | - | chr1.4:8723403-8723422 | MS.gene51557:intron | 20.0% |
| !! | ACAAATTCTCATTTATTGTT+TGG | + | chr1.4:8723980-8723999 | None:intergenic | 20.0% |
| !! | ATAAAATCTAACAAGTAAGA+TGG | + | chr1.4:8725994-8726013 | None:intergenic | 20.0% |
| !! | ATCCTGTAAAATAAAATTTG+TGG | - | chr1.4:8726923-8726942 | MS.gene51557:intron | 20.0% |
| !! | ATTAAAATAAGAAAAACTCC+CGG | + | chr1.4:8723840-8723859 | None:intergenic | 20.0% |
| !! | CAAATACAATTTCACAAATT+AGG | + | chr1.4:8722993-8723012 | None:intergenic | 20.0% |
| !! | GATAAGATTGAAGTATATTT+GGG | + | chr1.4:8724542-8724561 | None:intergenic | 20.0% |
| !! | TAAAATCTAACAAGTAAGAT+GGG | + | chr1.4:8725993-8726012 | None:intergenic | 20.0% |
| !! | TCAAATGAAGAAGAAAAAAA+AGG | - | chr1.4:8724937-8724956 | MS.gene51557:intron | 20.0% |
| !! | TGTAAAATAAAATTTGTGGT+TGG | - | chr1.4:8726927-8726946 | MS.gene51557:intron | 20.0% |
| !! | TTAATATCCAAATCGTAATA+CGG | + | chr1.4:8723056-8723075 | None:intergenic | 20.0% |
| !! | TTAGTAGGTAAAATTTATCT+GGG | + | chr1.4:8726116-8726135 | None:intergenic | 20.0% |
| !! | TTTATTTCATTTCACATTTG+AGG | - | chr1.4:8723702-8723721 | MS.gene51557:intron | 20.0% |
| !!! | AAAAACCTTTTAAAAGACAT+AGG | + | chr1.4:8727833-8727852 | None:intergenic | 20.0% |
| !!! | AAAACCTTTTAAAAGACATA+GGG | + | chr1.4:8727832-8727851 | None:intergenic | 20.0% |
| !!! | AACCACAAATTTTATTTTAC+AGG | + | chr1.4:8726928-8726947 | None:intergenic | 20.0% |
| !!! | AATGTGGAATATTATTTTAC+AGG | - | chr1.4:8726826-8726845 | MS.gene51557:CDS | 20.0% |
| !!! | CACAAAAAATCATTATTTTG+CGG | - | chr1.4:8727709-8727728 | MS.gene51557:intron | 20.0% |
| !!! | GCAATATTTTTGTAATTCAT+TGG | - | chr1.4:8724959-8724978 | MS.gene51557:intron | 20.0% |
| !!! | TCATTTGATTACTATTTTCA+AGG | + | chr1.4:8724925-8724944 | None:intergenic | 20.0% |
| !!! | TGTATTTGATTTGTGAAATT+AGG | - | chr1.4:8723005-8723024 | MS.gene51557:intron | 20.0% |
| !!! | TTAGATTTTATTTTGATGAG+TGG | - | chr1.4:8726003-8726022 | MS.gene51557:intron | 20.0% |
| !!! | TTGGAAATGATTTTGTTTTA+GGG | + | chr1.4:8727542-8727561 | None:intergenic | 20.0% |
| !!! | TTTTGGTTTTGTTTTGTTTT+TGG | - | chr1.4:8723227-8723246 | MS.gene51557:intron | 20.0% |
| ! | AAAAAAATGTGGTCCATATA+AGG | + | chr1.4:8726553-8726572 | None:intergenic | 25.0% |
| ! | AAAACAAAATCATTTCCAAC+AGG | - | chr1.4:8727543-8727562 | MS.gene51557:intron | 25.0% |
| ! | AAAATGGAACAAAAACAACA+AGG | + | chr1.4:8725887-8725906 | None:intergenic | 25.0% |
| ! | AAACAAAATCATTTCCAACA+GGG | - | chr1.4:8727544-8727563 | MS.gene51557:intron | 25.0% |
| ! | AAACAAGACAGTGATTAATA+AGG | - | chr1.4:8727161-8727180 | MS.gene51557:intron | 25.0% |
| ! | AAACCATACAAACACTAAAT+TGG | - | chr1.4:8728012-8728031 | MS.gene51557:CDS | 25.0% |
| ! | AAATTTATTGAAAGTCCTTG+TGG | - | chr1.4:8723563-8723582 | MS.gene51557:intron | 25.0% |
| ! | AACAAGACAGTGATTAATAA+GGG | - | chr1.4:8727162-8727181 | MS.gene51557:intron | 25.0% |
| ! | AACTCTTCAATTCAAATTGT+AGG | - | chr1.4:8727365-8727384 | MS.gene51557:intron | 25.0% |
| ! | AATAGAATCAAATAACGAGA+TGG | - | chr1.4:8723626-8723645 | MS.gene51557:intron | 25.0% |
| ! | AATGATTCCAATAAAGACAA+TGG | + | chr1.4:8726669-8726688 | None:intergenic | 25.0% |
| ! | ACAAATTTGCAATGCATTAT+GGG | - | chr1.4:8727784-8727803 | MS.gene51557:intron | 25.0% |
| ! | ACTGTCAAACATATAAAACA+AGG | + | chr1.4:8724335-8724354 | None:intergenic | 25.0% |
| ! | AGACTTACCAAAATAAAAGA+TGG | - | chr1.4:8726742-8726761 | MS.gene51557:intron | 25.0% |
| ! | AGCAAATATGAACTAACAAA+AGG | + | chr1.4:8724715-8724734 | None:intergenic | 25.0% |
| ! | ATAGAATCAAATAACGAGAT+GGG | - | chr1.4:8723627-8723646 | MS.gene51557:intron | 25.0% |
| ! | ATGATTCCAATAAAGACAAT+GGG | + | chr1.4:8726668-8726687 | None:intergenic | 25.0% |
| ! | ATGCAAGCCATAAATTATAA+AGG | + | chr1.4:8726635-8726654 | None:intergenic | 25.0% |
| ! | CAAATATAGTAGCATAATTG+AGG | - | chr1.4:8724622-8724641 | MS.gene51557:intron | 25.0% |
| ! | CAATCTAAGCAATGTATTTA+AGG | + | chr1.4:8724564-8724583 | None:intergenic | 25.0% |
| ! | CTTAGTAGGTAAAATTTATC+TGG | + | chr1.4:8726117-8726136 | None:intergenic | 25.0% |
| ! | GAAATAAATAGCATTTCACA+AGG | + | chr1.4:8723690-8723709 | None:intergenic | 25.0% |
| ! | GAACAATAACATATGAAACA+TGG | - | chr1.4:8723402-8723421 | MS.gene51557:intron | 25.0% |
| ! | GAAGATCTAAATATCTTGTT+TGG | - | chr1.4:8724163-8724182 | MS.gene51557:intron | 25.0% |
| ! | GGATAAGATTGAAGTATATT+TGG | + | chr1.4:8724543-8724562 | None:intergenic | 25.0% |
| ! | GTTAAAATGTACTACTATTG+TGG | - | chr1.4:8726481-8726500 | MS.gene51557:intron | 25.0% |
| ! | TACAAATTTGCAATGCATTA+TGG | - | chr1.4:8727783-8727802 | MS.gene51557:intron | 25.0% |
| ! | TATTGGAATCATTTCTTGTT+TGG | - | chr1.4:8726676-8726695 | MS.gene51557:intron | 25.0% |
| ! | TCAAAGATTTGTATAGGAAA+AGG | - | chr1.4:8724857-8724876 | MS.gene51557:intron | 25.0% |
| ! | TTAGTTGAATAGAAAATGAG+AGG | + | chr1.4:8725782-8725801 | None:intergenic | 25.0% |
| ! | TTTCTATTCAACTAAATGAG+AGG | - | chr1.4:8725787-8725806 | MS.gene51557:intron | 25.0% |
| !! | ATTTTACCCATTGTCTTTAT+TGG | - | chr1.4:8726659-8726678 | MS.gene51557:intron | 25.0% |
| !! | CGTACTATATACATTTTAGA+TGG | + | chr1.4:8727443-8727462 | None:intergenic | 25.0% |
| !! | GATATATACTTGTTGAGTTT+AGG | + | chr1.4:8727082-8727101 | None:intergenic | 25.0% |
| !! | GTAAAATTTGAAGGGTTTTT+GGG | + | chr1.4:8725081-8725100 | None:intergenic | 25.0% |
| !! | GTATTACGATTTGGATATTA+AGG | - | chr1.4:8723055-8723074 | MS.gene51557:intron | 25.0% |
| !! | TAAATATCTTGTTTGGTATG+TGG | - | chr1.4:8724170-8724189 | MS.gene51557:intron | 25.0% |
| !! | TATTGCTATTACACTTAGTT+TGG | + | chr1.4:8725919-8725938 | None:intergenic | 25.0% |
| !! | TGCTACTATATTTGTTGAAA+TGG | + | chr1.4:8724616-8724635 | None:intergenic | 25.0% |
| !! | TGTGTTTGTATTGATAGAAA+TGG | - | chr1.4:8723317-8723336 | MS.gene51557:intron | 25.0% |
| !! | TTTAAAAGACTCTAGTTCAT+GGG | - | chr1.4:8727749-8727768 | MS.gene51557:intron | 25.0% |
| !!! | AATCACTCCATCTTTTATTT+TGG | + | chr1.4:8726752-8726771 | None:intergenic | 25.0% |
| !!! | GGATAGTTTTACAATAAAAG+TGG | + | chr1.4:8723959-8723978 | None:intergenic | 25.0% |
| !!! | GTAGCAAAAAGTGTTATTTT+TGG | - | chr1.4:8726280-8726299 | MS.gene51557:intron | 25.0% |
| !!! | GTTGGAAATGATTTTGTTTT+AGG | + | chr1.4:8727543-8727562 | None:intergenic | 25.0% |
| !!! | TTATATGGACCACATTTTTT+TGG | - | chr1.4:8726552-8726571 | MS.gene51557:intron | 25.0% |
| !!! | TTTTAAAAGACTCTAGTTCA+TGG | - | chr1.4:8727748-8727767 | MS.gene51557:intron | 25.0% |
| AAAAAGGCAATCAAGAAGTA+TGG | + | chr1.4:8724442-8724461 | None:intergenic | 30.0% | |
| AAAATGTCGTGATTGCAATT+TGG | - | chr1.4:8726956-8726975 | MS.gene51557:intron | 30.0% | |
| AAAGTGAAACTTCTAGACTA+GGG | + | chr1.4:8725104-8725123 | None:intergenic | 30.0% | |
| AAATTGGTTGAAAACTGTTG+TGG | - | chr1.4:8723293-8723312 | MS.gene51557:intron | 30.0% | |
| AATAGATAAACACATCCACA+AGG | + | chr1.4:8723581-8723600 | None:intergenic | 30.0% | |
| AATTCAGAAGCAATAGCTTA+AGG | + | chr1.4:8725518-8725537 | None:intergenic | 30.0% | |
| AATTGGTTGAAAACTGTTGT+GGG | - | chr1.4:8723294-8723313 | MS.gene51557:intron | 30.0% | |
| ACATAGTTTCTGATGCATAT+GGG | - | chr1.4:8725306-8725325 | MS.gene51557:intron | 30.0% | |
| AGTAACTAATTGTGTGATTG+TGG | - | chr1.4:8724377-8724396 | MS.gene51557:intron | 30.0% | |
| ATCCCTTCACAAATTTCTTA+TGG | + | chr1.4:8725621-8725640 | None:intergenic | 30.0% | |
| CAAATTTGCAATGCATTATG+GGG | - | chr1.4:8727785-8727804 | MS.gene51557:intron | 30.0% | |
| CAAGTAAACGGTATTAAACA+TGG | - | chr1.4:8725048-8725067 | MS.gene51557:intron | 30.0% | |
| CACCATAAGAAATTTGTGAA+GGG | - | chr1.4:8725616-8725635 | MS.gene51557:intron | 30.0% | |
| CATAAATTATAAAGGCAAGC+AGG | + | chr1.4:8726627-8726646 | None:intergenic | 30.0% | |
| CATCACATATAGCAGTTATA+GGG | + | chr1.4:8726317-8726336 | None:intergenic | 30.0% | |
| CTAGATGAAGCTTGATAAAT+TGG | - | chr1.4:8723277-8723296 | MS.gene51557:intron | 30.0% | |
| CTGCTTGCCTTTATAATTTA+TGG | - | chr1.4:8726625-8726644 | MS.gene51557:intron | 30.0% | |
| GCTTAGATTGTTAGAAATCT+TGG | - | chr1.4:8724574-8724593 | MS.gene51557:intron | 30.0% | |
| GTAACTAATTGTGTGATTGT+GGG | - | chr1.4:8724378-8724397 | MS.gene51557:intron | 30.0% | |
| TAAAGTGAAACTTCTAGACT+AGG | + | chr1.4:8725105-8725124 | None:intergenic | 30.0% | |
| TACATAGTTTCTGATGCATA+TGG | - | chr1.4:8725305-8725324 | MS.gene51557:intron | 30.0% | |
| TAGAAAAAACACCTAGATCA+AGG | + | chr1.4:8725449-8725468 | None:intergenic | 30.0% | |
| TCATTGAATGGAATTCATGT+GGG | - | chr1.4:8726068-8726087 | MS.gene51557:intron | 30.0% | |
| TCTCCAATTTAGTGTTTGTA+TGG | + | chr1.4:8728018-8728037 | None:intergenic | 30.0% | |
| TGGATGTGTTTATCTATTGA+CGG | - | chr1.4:8723583-8723602 | MS.gene51557:intron | 30.0% | |
| TGTTTATCTATTGACGGAAA+TGG | - | chr1.4:8723589-8723608 | MS.gene51557:intron | 30.0% | |
| TTAACAGGGTATATGACTAA+TGG | - | chr1.4:8725004-8725023 | MS.gene51557:intron | 30.0% | |
| TTAATACCGTTTACTTGTGT+GGG | + | chr1.4:8725045-8725064 | None:intergenic | 30.0% | |
| TTATTAGAAAATGCCCAAGA+GGG | + | chr1.4:8726590-8726609 | None:intergenic | 30.0% | |
| TTCATTGAATGGAATTCATG+TGG | - | chr1.4:8726067-8726086 | MS.gene51557:intron | 30.0% | |
| TTGGATGCAGTTTAGATTTA+GGG | - | chr1.4:8725372-8725391 | MS.gene51557:intron | 30.0% | |
| TTGTAGATCCAAAGAAAAAC+TGG | - | chr1.4:8722868-8722887 | MS.gene51557:CDS | 30.0% | |
| TTTAATACCGTTTACTTGTG+TGG | + | chr1.4:8725046-8725065 | None:intergenic | 30.0% | |
| TTTACAGCACCAAAAAAATG+TGG | + | chr1.4:8726564-8726583 | None:intergenic | 30.0% | |
| TTTATTAGAAAATGCCCAAG+AGG | + | chr1.4:8726591-8726610 | None:intergenic | 30.0% | |
| ! | ACTATTGTGGTAGAATGTTT+TGG | - | chr1.4:8726494-8726513 | MS.gene51557:intron | 30.0% |
| ! | AGCTTTGATGAATCCTTATA+TGG | - | chr1.4:8726537-8726556 | MS.gene51557:intron | 30.0% |
| ! | ATAAAACAAGGCACTTACAA+AGG | + | chr1.4:8724323-8724342 | None:intergenic | 30.0% |
| ! | CTTGGGCATTTTCTAATAAA+TGG | - | chr1.4:8726591-8726610 | MS.gene51557:intron | 30.0% |
| ! | GATTTTCTGTGAACATACTT+TGG | - | chr1.4:8724103-8724122 | MS.gene51557:intron | 30.0% |
| ! | GGTAAAATTTGAAGGGTTTT+TGG | + | chr1.4:8725082-8725101 | None:intergenic | 30.0% |
| ! | TAATTAAGCCTATTTCTCCA+CGG | - | chr1.4:8728044-8728063 | MS.gene51557:CDS | 30.0% |
| ! | TCATTTTGCTTTCTCCAATT+TGG | - | chr1.4:8723890-8723909 | MS.gene51557:CDS | 30.0% |
| ! | TCCAATTTGGAGGTATAAAA+AGG | - | chr1.4:8723903-8723922 | MS.gene51557:CDS | 30.0% |
| ! | TCCTTTTTATACCTCCAAAT+TGG | + | chr1.4:8723907-8723926 | None:intergenic | 30.0% |
| ! | TGACTTGGGTTTAGTAATTA+CGG | + | chr1.4:8726870-8726889 | None:intergenic | 30.0% |
| ! | TTACGATTTGGATATTAAGG+AGG | - | chr1.4:8723058-8723077 | MS.gene51557:intron | 30.0% |
| ! | TTCATATTTGCTAGAGTAGA+TGG | - | chr1.4:8724723-8724742 | MS.gene51557:intron | 30.0% |
| ! | TTCTCCCTATGTCTTTTAAA+AGG | - | chr1.4:8727825-8727844 | MS.gene51557:intron | 30.0% |
| ! | TTTAGTAGAACTTTTGCACA+TGG | - | chr1.4:8725346-8725365 | MS.gene51557:intron | 30.0% |
| !! | ATATTAAGGAGGCTTTGAAT+CGG | - | chr1.4:8723069-8723088 | MS.gene51557:intron | 30.0% |
| !! | TTTGGTTGATGATGAAATCT+TGG | - | chr1.4:8726512-8726531 | MS.gene51557:intron | 30.0% |
| !!! | GAAGCTATTTTGATTGGAAT+TGG | - | chr1.4:8726456-8726475 | MS.gene51557:intron | 30.0% |
| AAAATAAGAAAAACTCCCGG+AGG | + | chr1.4:8723837-8723856 | None:intergenic | 35.0% | |
| AAAGAGTGAGTGCTAAAAAG+AGG | + | chr1.4:8726049-8726068 | None:intergenic | 35.0% | |
| AAAGATGGAGTGATTGTTCA+AGG | - | chr1.4:8726757-8726776 | MS.gene51557:intron | 35.0% | |
| AAATCTATAGAAGCTACCAC+AGG | - | chr1.4:8727207-8727226 | MS.gene51557:intron | 35.0% | |
| AAGACAATCAAGACAAGCAA+AGG | + | chr1.4:8724516-8724535 | None:intergenic | 35.0% | |
| AAGAGTGAGTGCTAAAAAGA+GGG | + | chr1.4:8726048-8726067 | None:intergenic | 35.0% | |
| AAGTGAAACTTCTAGACTAG+GGG | + | chr1.4:8725103-8725122 | None:intergenic | 35.0% | |
| AATAGCTTAAGGTCTTCAAC+TGG | + | chr1.4:8725507-8725526 | None:intergenic | 35.0% | |
| AATCTATAGAAGCTACCACA+GGG | - | chr1.4:8727208-8727227 | MS.gene51557:intron | 35.0% | |
| ACATATAGATGGGTCTTAAC+AGG | - | chr1.4:8724989-8725008 | MS.gene51557:intron | 35.0% | |
| AGACTAGGGGTAAAATTTGA+AGG | + | chr1.4:8725090-8725109 | None:intergenic | 35.0% | |
| ATATCTTCTCAACTGAAGTG+AGG | - | chr1.4:8727097-8727116 | MS.gene51557:intron | 35.0% | |
| ATCAAGGATACACACATAGA+TGG | + | chr1.4:8725433-8725452 | None:intergenic | 35.0% | |
| ATGATTGCTATGTCTTTAGC+AGG | + | chr1.4:8725137-8725156 | None:intergenic | 35.0% | |
| CATATAGATGGGTCTTAACA+GGG | - | chr1.4:8724990-8725009 | MS.gene51557:intron | 35.0% | |
| CATTGAATGGAATTCATGTG+GGG | - | chr1.4:8726069-8726088 | MS.gene51557:intron | 35.0% | |
| CCACCATAAGAAATTTGTGA+AGG | - | chr1.4:8725615-8725634 | MS.gene51557:intron | 35.0% | |
| CCTGTCAAAAACAGATACAA+AGG | + | chr1.4:8724258-8724277 | None:intergenic | 35.0% | |
| CCTTCACAAATTTCTTATGG+TGG | + | chr1.4:8725618-8725637 | None:intergenic | 35.0% | |
| CTATTTCATTGTACTGTCAC+TGG | - | chr1.4:8724003-8724022 | MS.gene51557:intron | 35.0% | |
| CTCAGACATGCATTCATATT+TGG | - | chr1.4:8727658-8727677 | MS.gene51557:intron | 35.0% | |
| GAAAACAGAAATTCAGACAC+AGG | + | chr1.4:8724781-8724800 | None:intergenic | 35.0% | |
| GAAGTGAGGATCTTAAAGAA+GGG | - | chr1.4:8727111-8727130 | MS.gene51557:intron | 35.0% | |
| GACACATAATTCTACCATAG+TGG | + | chr1.4:8725581-8725600 | None:intergenic | 35.0% | |
| GACTAGGGGTAAAATTTGAA+GGG | + | chr1.4:8725089-8725108 | None:intergenic | 35.0% | |
| GCATCACATATAGCAGTTAT+AGG | + | chr1.4:8726318-8726337 | None:intergenic | 35.0% | |
| GCTAAAGACATAGCAATCAT+GGG | - | chr1.4:8725137-8725156 | MS.gene51557:intron | 35.0% | |
| GGAAATAGACGAAAAGAAAG+TGG | + | chr1.4:8725402-8725421 | None:intergenic | 35.0% | |
| GTATGATCCGTATTACGATT+TGG | - | chr1.4:8723046-8723065 | MS.gene51557:intron | 35.0% | |
| GTGGAATGTCTATTATGGTT+AGG | + | chr1.4:8728196-8728215 | None:intergenic | 35.0% | |
| GTTGACATGGTAAAATAAGC+AGG | + | chr1.4:8727475-8727494 | None:intergenic | 35.0% | |
| GTTGGATGCAGTTTAGATTT+AGG | - | chr1.4:8725371-8725390 | MS.gene51557:intron | 35.0% | |
| TAATACCGTTTACTTGTGTG+GGG | + | chr1.4:8725044-8725063 | None:intergenic | 35.0% | |
| TATGTGTGTATCCTTGATCT+AGG | - | chr1.4:8725435-8725454 | MS.gene51557:intron | 35.0% | |
| TATTATGGTTAGGAAGTGGA+TGG | + | chr1.4:8728186-8728205 | None:intergenic | 35.0% | |
| TCAACATTCACTCTCTTAGT+AGG | + | chr1.4:8726131-8726150 | None:intergenic | 35.0% | |
| TGAAGTGAGGATCTTAAAGA+AGG | - | chr1.4:8727110-8727129 | MS.gene51557:intron | 35.0% | |
| TGATTGCTATGTCTTTAGCA+GGG | + | chr1.4:8725136-8725155 | None:intergenic | 35.0% | |
| TGCTAAAGACATAGCAATCA+TGG | - | chr1.4:8725136-8725155 | MS.gene51557:intron | 35.0% | |
| TGTCTATTATGGTTAGGAAG+TGG | + | chr1.4:8728190-8728209 | None:intergenic | 35.0% | |
| TGTGGTAGCTTCTATAGATT+TGG | + | chr1.4:8727208-8727227 | None:intergenic | 35.0% | |
| TTCACGTGGAATGTCTATTA+TGG | + | chr1.4:8728201-8728220 | None:intergenic | 35.0% | |
| TTGATGTCTATACAACCACA+AGG | - | chr1.4:8723800-8723819 | MS.gene51557:intron | 35.0% | |
| ! | AACGCATTGATAAGTTGGAT+TGG | - | chr1.4:8725265-8725284 | MS.gene51557:intron | 35.0% |
| ! | ACTAAACCCAAGTCATGTTT+TGG | - | chr1.4:8726875-8726894 | MS.gene51557:intron | 35.0% |
| ! | ACTCTAACGCATTGATAAGT+TGG | - | chr1.4:8725260-8725279 | MS.gene51557:intron | 35.0% |
| ! | AGTTTGGATGGTGATGAAAA+TGG | + | chr1.4:8725903-8725922 | None:intergenic | 35.0% |
| ! | ATTGCAATCACGACATTTTC+AGG | + | chr1.4:8726955-8726974 | None:intergenic | 35.0% |
| ! | CTAAACCCAAGTCATGTTTT+GGG | - | chr1.4:8726876-8726895 | MS.gene51557:intron | 35.0% |
| ! | CTTTTCAACCCACAATTTTC+AGG | - | chr1.4:8726344-8726363 | MS.gene51557:intron | 35.0% |
| ! | GCTATTACACTTAGTTTGGA+TGG | + | chr1.4:8725915-8725934 | None:intergenic | 35.0% |
| ! | TAAACCCAAGTCATGTTTTG+GGG | - | chr1.4:8726877-8726896 | MS.gene51557:intron | 35.0% |
| ! | TTGCAATCACGACATTTTCA+GGG | + | chr1.4:8726954-8726973 | None:intergenic | 35.0% |
| ! | TTTTGCTTTCTCCAATTTGG+AGG | - | chr1.4:8723893-8723912 | MS.gene51557:CDS | 35.0% |
| !! | CAGCAGAGTTTGTTTTCATT+GGG | - | chr1.4:8724887-8724906 | MS.gene51557:intron | 35.0% |
| !! | GATAAGTTGGATTGGTTACT+GGG | - | chr1.4:8725273-8725292 | MS.gene51557:intron | 35.0% |
| !! | TGATAAGTTGGATTGGTTAC+TGG | - | chr1.4:8725272-8725291 | MS.gene51557:intron | 35.0% |
| !!! | CACTGATTTTATATTCGCAG+GGG | + | chr1.4:8727053-8727072 | None:intergenic | 35.0% |
| !!! | CCTTTGTATCTGTTTTTGAC+AGG | - | chr1.4:8724255-8724274 | MS.gene51557:intron | 35.0% |
| !!! | GCACTGATTTTATATTCGCA+GGG | + | chr1.4:8727054-8727073 | None:intergenic | 35.0% |
| !!! | TCGCTTGAAGCTATTTTGAT+TGG | - | chr1.4:8726450-8726469 | MS.gene51557:intron | 35.0% |
| !!! | TGCACTGATTTTATATTCGC+AGG | + | chr1.4:8727055-8727074 | None:intergenic | 35.0% |
| !!! | TTTATTTTGATGAGTGGTGC+TGG | - | chr1.4:8726009-8726028 | MS.gene51557:intron | 35.0% |
| AAAACCTGCCGTATAACCAA+TGG | + | chr1.4:8725661-8725680 | None:intergenic | 40.0% | |
| AAACACCCCAAAACATGACT+TGG | + | chr1.4:8726885-8726904 | None:intergenic | 40.0% | |
| AACACCCCAAAACATGACTT+GGG | + | chr1.4:8726884-8726903 | None:intergenic | 40.0% | |
| AACCCTTCCATAAGTGCATT+GGG | - | chr1.4:8726422-8726441 | MS.gene51557:intron | 40.0% | |
| AACTGGAAGTGGTTCTCTAT+GGG | + | chr1.4:8725490-8725509 | None:intergenic | 40.0% | |
| AAGACCCATCTATATGTGCA+GGG | + | chr1.4:8724986-8725005 | None:intergenic | 40.0% | |
| AATGTAGGACATCCTTCTCA+TGG | + | chr1.4:8728225-8728244 | None:intergenic | 40.0% | |
| ACAACATTACACTGCACAAG+TGG | + | chr1.4:8724083-8724102 | None:intergenic | 40.0% | |
| AGAGTGAGTGCTAAAAAGAG+GGG | + | chr1.4:8726047-8726066 | None:intergenic | 40.0% | |
| AGCAAATGCTGTCTCAATTG+TGG | - | chr1.4:8723756-8723775 | MS.gene51557:intron | 40.0% | |
| AGGAAGATACTCATGCTTCA+TGG | + | chr1.4:8723153-8723172 | None:intergenic | 40.0% | |
| AGTGCAGACATAATCTCTAC+AGG | - | chr1.4:8724034-8724053 | MS.gene51557:intron | 40.0% | |
| CCAATGAAAACAAACTCTGC+TGG | + | chr1.4:8724889-8724908 | None:intergenic | 40.0% | |
| CCTCTTCACCTGAAAATTGT+GGG | + | chr1.4:8726355-8726374 | None:intergenic | 40.0% | |
| GATACTACCCAATGCACTTA+TGG | + | chr1.4:8726432-8726451 | None:intergenic | 40.0% | |
| GCACTCACTCTTTCATTGAA+TGG | - | chr1.4:8726056-8726075 | MS.gene51557:intron | 40.0% | |
| GCAGGGGATATATATGTGTA+GGG | + | chr1.4:8727037-8727056 | None:intergenic | 40.0% | |
| GTAGGGATGTATCTCAAACA+GGG | + | chr1.4:8727020-8727039 | None:intergenic | 40.0% | |
| GTTCTCCTAAGCAGAAAATG+AGG | + | chr1.4:8728149-8728168 | None:intergenic | 40.0% | |
| TAAGACCCATCTATATGTGC+AGG | + | chr1.4:8724987-8725006 | None:intergenic | 40.0% | |
| TAAGGGCAACATATTCTCGT+CGG | - | chr1.4:8727179-8727198 | MS.gene51557:intron | 40.0% | |
| TACCCAATGCACTTATGGAA+GGG | + | chr1.4:8726427-8726446 | None:intergenic | 40.0% | |
| TCCAAACGTCTTCGCAAATA+CGG | - | chr1.4:8722918-8722937 | MS.gene51557:CDS | 40.0% | |
| TGACCACCATTTAACAACAC+TGG | + | chr1.4:8725552-8725571 | None:intergenic | 40.0% | |
| TGTAGGGATGTATCTCAAAC+AGG | + | chr1.4:8727021-8727040 | None:intergenic | 40.0% | |
| TTAAGGTCTTCAACTGGAAG+TGG | + | chr1.4:8725501-8725520 | None:intergenic | 40.0% | |
| TTCTATTAGCGTGCGAAATG+TGG | - | chr1.4:8726810-8726829 | MS.gene51557:intron | 40.0% | |
| ! | ACTTGCCTCATTTTCTGCTT+AGG | - | chr1.4:8728141-8728160 | MS.gene51557:intron | 40.0% |
| ! | CAAATCTTTAGAGACTACCG+TGG | + | chr1.4:8728064-8728083 | None:intergenic | 40.0% |
| ! | CACTGTCCAGTGTTGTTAAA+TGG | - | chr1.4:8725543-8725562 | MS.gene51557:intron | 40.0% |
| ! | GAACTTTTGCACATGGAAGT+TGG | - | chr1.4:8725353-8725372 | MS.gene51557:intron | 40.0% |
| ! | GATTAACGGGTGAAAAAGAG+AGG | - | chr1.4:8727288-8727307 | MS.gene51557:intron | 40.0% |
| ! | GTGTTGTTAAATGGTGGTCA+TGG | - | chr1.4:8725552-8725571 | MS.gene51557:intron | 40.0% |
| ! | TGTCCAGTGTTGTTAAATGG+TGG | - | chr1.4:8725546-8725565 | MS.gene51557:intron | 40.0% |
| ! | TTGGTTATACGGCAGGTTTT+TGG | - | chr1.4:8725661-8725680 | MS.gene51557:intron | 40.0% |
| !! | CCAGCAGAGTTTGTTTTCAT+TGG | - | chr1.4:8724886-8724905 | MS.gene51557:intron | 40.0% |
| !! | GAAAGTGTCAGTGCTACATA+GGG | - | chr1.4:8723532-8723551 | MS.gene51557:intron | 40.0% |
| !! | TGAAAGTGTCAGTGCTACAT+AGG | - | chr1.4:8723531-8723550 | MS.gene51557:intron | 40.0% |
| !! | TGTAGCACTGACACTTTCAA+TGG | + | chr1.4:8723530-8723549 | None:intergenic | 40.0% |
| !!! | AAGTCATGTTTTGGGGTGTT+TGG | - | chr1.4:8726884-8726903 | MS.gene51557:intron | 40.0% |
| !!! | CCACAATTTTCAGGTGAAGA+GGG | - | chr1.4:8726353-8726372 | MS.gene51557:intron | 40.0% |
| AAACCAACCTGAAGATCCTC+AGG | + | chr1.4:8723173-8723192 | None:intergenic | 45.0% | |
| AAGGTAGAGTTAGATCCTCC+GGG | - | chr1.4:8723819-8723838 | MS.gene51557:intron | 45.0% | |
| ACAGCTAAACTCAACCCTGT+TGG | + | chr1.4:8727561-8727580 | None:intergenic | 45.0% | |
| ACAGGGTTGAGTTTAGCTGT+AGG | - | chr1.4:8727561-8727580 | MS.gene51557:intron | 45.0% | |
| ACATTAGCAAAGCCATCCAC+CGG | - | chr1.4:8728240-8728259 | MS.gene51557:CDS | 45.0% | |
| ACCGTATTTGCGAAGACGTT+TGG | + | chr1.4:8722922-8722941 | None:intergenic | 45.0% | |
| AGAGACTACCGTGGAGAAAT+AGG | + | chr1.4:8728055-8728074 | None:intergenic | 45.0% | |
| AGAGAGGTTCGAGGATTAAC+GGG | - | chr1.4:8727275-8727294 | MS.gene51557:intron | 45.0% | |
| AGGATACACACATAGATGGC+AGG | + | chr1.4:8725429-8725448 | None:intergenic | 45.0% | |
| AGGCAATGCAAACACCATTC+AGG | - | chr1.4:8724275-8724294 | MS.gene51557:intron | 45.0% | |
| ATCCTTCTCATGGATTCACG+TGG | + | chr1.4:8728215-8728234 | None:intergenic | 45.0% | |
| ATCTCTCTTCCATCTTGGCA+TGG | + | chr1.4:8726985-8727004 | None:intergenic | 45.0% | |
| ATGGAAGGGTTCGTTGATAC+AGG | + | chr1.4:8726413-8726432 | None:intergenic | 45.0% | |
| ATGGCAGTTGATTGTGAGGA+AGG | - | chr1.4:8725162-8725181 | MS.gene51557:intron | 45.0% | |
| ATGTGCCCCACACAAGTAAA+CGG | - | chr1.4:8725036-8725055 | MS.gene51557:intron | 45.0% | |
| ATTGTGAGGAAGGATTCCAG+AGG | - | chr1.4:8725172-8725191 | MS.gene51557:intron | 45.0% | |
| CAAAGGTCAGCATATCCTGA+AGG | + | chr1.4:8724306-8724325 | None:intergenic | 45.0% | |
| CAACTGGAAGTGGTTCTCTA+TGG | + | chr1.4:8725491-8725510 | None:intergenic | 45.0% | |
| CAAGGTAGAGTTAGATCCTC+CGG | - | chr1.4:8723818-8723837 | MS.gene51557:intron | 45.0% | |
| CAGAGAGGTTCGAGGATTAA+CGG | - | chr1.4:8727274-8727293 | MS.gene51557:intron | 45.0% | |
| CAGGGTTGAGTTTAGCTGTA+GGG | - | chr1.4:8727562-8727581 | MS.gene51557:intron | 45.0% | |
| CATGTCAACCTGCATACTCA+CGG | - | chr1.4:8727486-8727505 | MS.gene51557:intron | 45.0% | |
| CCCTCTTCACCTGAAAATTG+TGG | + | chr1.4:8726356-8726375 | None:intergenic | 45.0% | |
| CGCAGGGGATATATATGTGT+AGG | + | chr1.4:8727038-8727057 | None:intergenic | 45.0% | |
| CTACCCAATGCACTTATGGA+AGG | + | chr1.4:8726428-8726447 | None:intergenic | 45.0% | |
| GAACCCTTCCATAAGTGCAT+TGG | - | chr1.4:8726421-8726440 | MS.gene51557:intron | 45.0% | |
| GAACCTCTCTGTTAACCGTA+GGG | + | chr1.4:8727265-8727284 | None:intergenic | 45.0% | |
| GAAGCATGAGTATCTTCCTG+AGG | - | chr1.4:8723154-8723173 | MS.gene51557:intron | 45.0% | |
| GACATAGCAATCATGGGTCA+TGG | - | chr1.4:8725143-8725162 | MS.gene51557:intron | 45.0% | |
| GAGGATCTAACTCTACCTTG+TGG | + | chr1.4:8723818-8723837 | None:intergenic | 45.0% | |
| GAGTGAGTGCTAAAAAGAGG+GGG | + | chr1.4:8726046-8726065 | None:intergenic | 45.0% | |
| GATACACACATAGATGGCAG+GGG | + | chr1.4:8725427-8725446 | None:intergenic | 45.0% | |
| GCTCTATCTCTCTTCCATCT+TGG | + | chr1.4:8726990-8727009 | None:intergenic | 45.0% | |
| GGATACACACATAGATGGCA+GGG | + | chr1.4:8725428-8725447 | None:intergenic | 45.0% | |
| GTATCTTCCTGAGGATCTTC+AGG | - | chr1.4:8723163-8723182 | MS.gene51557:intron | 45.0% | |
| GTGCTGTAAACTTCCCTCTT+GGG | - | chr1.4:8726574-8726593 | MS.gene51557:intron | 45.0% | |
| TGGAAGGGTTCGTTGATACA+GGG | + | chr1.4:8726412-8726431 | None:intergenic | 45.0% | |
| TGTGGGGCTCATTTGTAGAA+TGG | - | chr1.4:8726085-8726104 | MS.gene51557:intron | 45.0% | |
| TTCCACGTGAATCCATGAGA+AGG | - | chr1.4:8728210-8728229 | MS.gene51557:CDS | 45.0% | |
| ! | GCAGCGAACCAGTTTTTCTT+TGG | + | chr1.4:8722879-8722898 | None:intergenic | 45.0% |
| ! | GTGGATGGCTTTGCTAATGT+AGG | + | chr1.4:8728240-8728259 | None:intergenic | 45.0% |
| ! | TGCATTATGGGGCACTTCAA+TGG | - | chr1.4:8727796-8727815 | MS.gene51557:intron | 45.0% |
| ! | TTTGAATCGGCTTCCAAAGG+AGG | - | chr1.4:8723082-8723101 | MS.gene51557:intron | 45.0% |
| !! | ATTTGGTGTCCATGCCAAGA+TGG | - | chr1.4:8726973-8726992 | MS.gene51557:intron | 45.0% |
| !! | TGAGGATCTTCAGGTTGGTT+TGG | - | chr1.4:8723172-8723191 | MS.gene51557:intron | 45.0% |
| !!! | CCCACAATTTTCAGGTGAAG+AGG | - | chr1.4:8726352-8726371 | MS.gene51557:intron | 45.0% |
| !!! | AACATTTTTATAAATAAAAA+AGG | + | chr1.4:8724827-8724846 | None:intergenic | 5.0% |
| !!! | ATAAAAAAATTGATTTTTTT+TGG | - | chr1.4:8723210-8723229 | MS.gene51557:intron | 5.0% |
| !!! | TTCAAATTTTTTTTTTTTTT+TGG | + | chr1.4:8728117-8728136 | None:intergenic | 5.0% |
| ACATTCCACCGTGAGTATGC+AGG | + | chr1.4:8727497-8727516 | None:intergenic | 50.0% | |
| ACCATTCAGGAGCTACCTTC+AGG | - | chr1.4:8724288-8724307 | MS.gene51557:intron | 50.0% | |
| ACGGTTAACAGAGAGGTTCG+AGG | - | chr1.4:8727266-8727285 | MS.gene51557:intron | 50.0% | |
| ACTGGACACTGACAGCATCA+TGG | - | chr1.4:8725702-8725721 | MS.gene51557:intron | 50.0% | |
| ACTTGTGTGGGGCACATATG+TGG | + | chr1.4:8725033-8725052 | None:intergenic | 50.0% | |
| AGACACGGACAGGTTTACGA+GGG | - | chr1.4:8723434-8723453 | MS.gene51557:intron | 50.0% | |
| CGAACCTCTCTGTTAACCGT+AGG | + | chr1.4:8727266-8727285 | None:intergenic | 50.0% | |
| CGAGCATCAACAACCTCCTT+TGG | + | chr1.4:8723098-8723117 | None:intergenic | 50.0% | |
| CTCAAGGGTTGTTCAACCTC+TGG | + | chr1.4:8725191-8725210 | None:intergenic | 50.0% | |
| CTCCACAGTACTCAGCTCAA+GGG | + | chr1.4:8725206-8725225 | None:intergenic | 50.0% | |
| CTGCCGTATAACCAATGGCA+CGG | + | chr1.4:8725656-8725675 | None:intergenic | 50.0% | |
| CTGGTATCATGCCCCAACAT+CGG | + | chr1.4:8725231-8725250 | None:intergenic | 50.0% | |
| CTTCCTGAGGATCTTCAGGT+TGG | - | chr1.4:8723167-8723186 | MS.gene51557:intron | 50.0% | |
| GCGTTAGAGTCCATATCAGC+TGG | + | chr1.4:8725250-8725269 | None:intergenic | 50.0% | |
| GCTATGTCTTTAGCAGGGCT+TGG | + | chr1.4:8725131-8725150 | None:intergenic | 50.0% | |
| GGAAGGGTTCGTTGATACAG+GGG | + | chr1.4:8726411-8726430 | None:intergenic | 50.0% | |
| GGGCATGATACCAGCTGATA+TGG | - | chr1.4:8725237-8725256 | MS.gene51557:intron | 50.0% | |
| GGTCATGGCAGTTGATTGTG+AGG | - | chr1.4:8725158-8725177 | MS.gene51557:intron | 50.0% | |
| TACTGTGGAGACCCGATGTT+GGG | - | chr1.4:8725216-8725235 | MS.gene51557:intron | 50.0% | |
| TCCTGAAGGTAGCTCCTGAA+TGG | + | chr1.4:8724292-8724311 | None:intergenic | 50.0% | |
| TCTCCACAGTACTCAGCTCA+AGG | + | chr1.4:8725207-8725226 | None:intergenic | 50.0% | |
| TGCCGTATAACCAATGGCAC+GGG | + | chr1.4:8725655-8725674 | None:intergenic | 50.0% | |
| TGGGCCCTGCACATATAGAT+GGG | - | chr1.4:8724979-8724998 | MS.gene51557:intron | 50.0% | |
| TGGTATCATGCCCCAACATC+GGG | + | chr1.4:8725230-8725249 | None:intergenic | 50.0% | |
| TGTGGACATACAAGAGCGAC+CGG | + | chr1.4:8728262-8728281 | None:intergenic | 50.0% | |
| TGTTAACCGTAGGGCAGCAA+TGG | + | chr1.4:8727256-8727275 | None:intergenic | 50.0% | |
| TTGGGCCCTGCACATATAGA+TGG | - | chr1.4:8724978-8724997 | MS.gene51557:intron | 50.0% | |
| TTGTGAAGGGATTCCCGTCA+TGG | - | chr1.4:8725629-8725648 | MS.gene51557:intron | 50.0% | |
| ! | AACCCTTGAGCTGAGTACTG+TGG | - | chr1.4:8725201-8725220 | MS.gene51557:intron | 50.0% |
| ! | CGTGAGTATGCAGGTTGACA+TGG | + | chr1.4:8727488-8727507 | None:intergenic | 50.0% |
| ! | GGTGCTGTAAACTTCCCTCT+TGG | - | chr1.4:8726573-8726592 | MS.gene51557:intron | 50.0% |
| !! | GGCTTTGAATCGGCTTCCAA+AGG | - | chr1.4:8723079-8723098 | MS.gene51557:intron | 50.0% |
| ACATGGGCTCGACACAGACA+CGG | - | chr1.4:8723419-8723438 | MS.gene51557:intron | 55.0% | |
| ACGAGCAGAGCGTGAAGCAT+TGG | - | chr1.4:8726377-8726396 | MS.gene51557:intron | 55.0% | |
| ACTGTGGAGACCCGATGTTG+GGG | - | chr1.4:8725217-8725236 | MS.gene51557:intron | 55.0% | |
| ATACAAGAGCGACCGGTGGA+TGG | + | chr1.4:8728255-8728274 | None:intergenic | 55.0% | |
| ATGCCACCATTGCTGCCCTA+CGG | - | chr1.4:8727247-8727266 | MS.gene51557:intron | 55.0% | |
| CACACATAGATGGCAGGGGA+TGG | + | chr1.4:8725423-8725442 | None:intergenic | 55.0% | |
| CACGTGTGTCAGTGTCGTGT+CGG | - | chr1.4:8723483-8723502 | MS.gene51557:intron | 55.0% | |
| CAGACACGGACAGGTTTACG+AGG | - | chr1.4:8723433-8723452 | MS.gene51557:intron | 55.0% | |
| CTGCCCTACGGTTAACAGAG+AGG | - | chr1.4:8727259-8727278 | MS.gene51557:intron | 55.0% | |
| GGTGGTCATGGTAGCCACTA+TGG | - | chr1.4:8725564-8725583 | MS.gene51557:intron | 55.0% | |
| GTACTGTGGAGACCCGATGT+TGG | - | chr1.4:8725215-8725234 | MS.gene51557:intron | 55.0% | |
| GTCAACCTGCATACTCACGG+TGG | - | chr1.4:8727489-8727508 | MS.gene51557:intron | 55.0% | |
| TAACCGTAGGGCAGCAATGG+TGG | + | chr1.4:8727253-8727272 | None:intergenic | 55.0% | |
| TCAGTGTCCAGTGCTGTCGT+TGG | + | chr1.4:8725694-8725713 | None:intergenic | 55.0% | |
| ! | CGAGCAGAGCGTGAAGCATT+GGG | - | chr1.4:8726378-8726397 | MS.gene51557:intron | 55.0% |
| ! | CGTGCCATTGGTTATACGGC+AGG | - | chr1.4:8725654-8725673 | MS.gene51557:intron | 55.0% |
| ! | GGCCCGTGCCATTGGTTATA+CGG | - | chr1.4:8725650-8725669 | MS.gene51557:intron | 55.0% |
| ACCAATGGCACGGGCCATGA+CGG | + | chr1.4:8725646-8725665 | None:intergenic | 60.0% | |
| ACCACAGGGTTACGAGCAGC+AGG | - | chr1.4:8727222-8727241 | MS.gene51557:intron | 60.0% | |
| CCACAGGGTTACGAGCAGCA+GGG | - | chr1.4:8727223-8727242 | MS.gene51557:intron | 60.0% | |
| CCAGTGCTGTCGTTGGCAGA+AGG | + | chr1.4:8725687-8725706 | None:intergenic | 60.0% | |
| CCTTCTGCCAACGACAGCAC+TGG | - | chr1.4:8725684-8725703 | MS.gene51557:intron | 60.0% | |
| GGACATACAAGAGCGACCGG+TGG | + | chr1.4:8728259-8728278 | None:intergenic | 60.0% | |
| ! | GTGTCAGTGTCGTGTCGGTG+TGG | - | chr1.4:8723488-8723507 | MS.gene51557:intron | 60.0% |
| !! | GCAGAGCGTGAAGCATTGGG+AGG | - | chr1.4:8726381-8726400 | MS.gene51557:intron | 60.0% |
| CCAATGGCACGGGCCATGAC+GGG | + | chr1.4:8725645-8725664 | None:intergenic | 65.0% | |
| CCCTGCTGCTCGTAACCCTG+TGG | + | chr1.4:8727226-8727245 | None:intergenic | 65.0% | |
| GGCTCGACACAGACACGGAC+AGG | - | chr1.4:8723424-8723443 | MS.gene51557:intron | 65.0% | |
| ! | TGTCGTGTCGGTGTGGACGC+TGG | - | chr1.4:8723495-8723514 | MS.gene51557:intron | 65.0% |
| CCCGTCATGGCCCGTGCCAT+TGG | - | chr1.4:8725642-8725661 | MS.gene51557:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8722846 | 8728289 | 8722846 | ID=MS.gene51557 |
| chr1.4 | mRNA | 8722846 | 8728289 | 8722846 | ID=MS.gene51557.t1;Parent=MS.gene51557 |
| chr1.4 | exon | 8728196 | 8728289 | 8728196 | ID=MS.gene51557.t1.exon1;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8728196 | 8728289 | 8728196 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| chr1.4 | exon | 8727951 | 8728108 | 8727951 | ID=MS.gene51557.t1.exon2;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8727951 | 8728108 | 8727951 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| chr1.4 | exon | 8726811 | 8726858 | 8726811 | ID=MS.gene51557.t1.exon3;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8726811 | 8726858 | 8726811 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| chr1.4 | exon | 8724733 | 8724769 | 8724733 | ID=MS.gene51557.t1.exon4;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8724733 | 8724769 | 8724733 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| chr1.4 | exon | 8723855 | 8724020 | 8723855 | ID=MS.gene51557.t1.exon5;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8723855 | 8724020 | 8723855 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| chr1.4 | exon | 8722846 | 8722972 | 8722846 | ID=MS.gene51557.t1.exon6;Parent=MS.gene51557.t1 |
| chr1.4 | CDS | 8722846 | 8722972 | 8722846 | ID=cds.MS.gene51557.t1;Parent=MS.gene51557.t1 |
| Gene Sequence |
| Protein sequence |
