Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62154.t1 | RHN64982.1 | 97.9 | 281 | 6 | 0 | 1 | 281 | 2 | 282 | 5.40E-157 | 563.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62154.t1 | O65398 | 77.2 | 276 | 63 | 0 | 6 | 281 | 8 | 283 | 5.9e-128 | 458.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62154.t1 | G7JJ88 | 97.9 | 281 | 6 | 0 | 1 | 281 | 1 | 281 | 3.9e-157 | 563.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene62154 | 0.802624 | 5.13E-49 | -1.69E-46 |
| MS.gene049195 | MS.gene62154 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene62154 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene04933 | MS.gene62154 | 0.830768 | 2.44E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene62154 | 0.806446 | 8.20E-50 | -1.69E-46 |
| MS.gene049599 | MS.gene62154 | -0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene62154 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene62154 | 0.862837 | 3.82E-64 | -1.69E-46 |
| MS.gene050099 | MS.gene62154 | 0.810039 | 1.41E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene62154 | 0.831246 | 1.86E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene62154 | -0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene62154 | 0.829682 | 4.49E-55 | -1.69E-46 |
| MS.gene050787 | MS.gene62154 | 0.814784 | 1.29E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene62154 | -0.803268 | 3.78E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene62154 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene62154 | 0.85882 | 6.34E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene62154 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene052025 | MS.gene62154 | 0.815376 | 9.55E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene62154 | 0.819789 | 9.66E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene62154 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene052207 | MS.gene62154 | 0.825603 | 4.28E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene62154 | -0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene62154 | 0.80324 | 3.83E-49 | -1.69E-46 |
| MS.gene053811 | MS.gene62154 | 0.806095 | 9.71E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene62154 | 0.87011 | 1.87E-66 | -1.69E-46 |
| MS.gene054011 | MS.gene62154 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene054173 | MS.gene62154 | 0.810312 | 1.23E-50 | -1.69E-46 |
| MS.gene054184 | MS.gene62154 | 0.811431 | 7.02E-51 | -1.69E-46 |
| MS.gene054185 | MS.gene62154 | 0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene62154 | 0.840968 | 6.31E-58 | -1.69E-46 |
| MS.gene054542 | MS.gene62154 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene62154 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene62154 | 0.816527 | 5.28E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene62154 | 0.856505 | 3.07E-62 | -1.69E-46 |
| MS.gene055358 | MS.gene62154 | 0.81242 | 4.28E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene62154 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene62154 | 0.837217 | 5.92E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene62154 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene62154 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene056069 | MS.gene62154 | -0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene62154 | 0.818283 | 2.13E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene62154 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene62154 | 0.803076 | 4.14E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene62154 | 0.82173 | 3.46E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene62154 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene62154 | 0.839742 | 1.32E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene62154 | 0.825067 | 5.74E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene62154 | 0.833207 | 6.09E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene62154 | 0.853 | 3.19E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene62154 | 0.802132 | 6.49E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene62154 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene058749 | MS.gene62154 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene62154 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene62154 | 0.813114 | 3.01E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene62154 | 0.847072 | 1.46E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene62154 | 0.852678 | 3.94E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene62154 | 0.805469 | 1.31E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene62154 | 0.841207 | 5.46E-58 | -1.69E-46 |
| MS.gene060476 | MS.gene62154 | 0.816327 | 5.85E-52 | -1.69E-46 |
| MS.gene060994 | MS.gene62154 | 0.810315 | 1.23E-50 | -1.69E-46 |
| MS.gene061000 | MS.gene62154 | 0.808269 | 3.37E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene62154 | 0.82577 | 3.91E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene62154 | -0.810193 | 1.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62154.t1 | MTR_4g132270 | 97.865 | 281 | 6 | 0 | 1 | 281 | 24 | 304 | 0.0 | 563 |
| MS.gene62154.t1 | MTR_4g132270 | 97.865 | 281 | 6 | 0 | 1 | 281 | 1 | 281 | 0.0 | 563 |
| MS.gene62154.t1 | MTR_4g132260 | 96.441 | 281 | 10 | 0 | 1 | 281 | 1 | 281 | 0.0 | 556 |
| MS.gene62154.t1 | MTR_2g023500 | 78.623 | 276 | 59 | 0 | 6 | 281 | 12 | 287 | 1.76e-166 | 462 |
| MS.gene62154.t1 | MTR_8g102980 | 70.290 | 276 | 78 | 1 | 6 | 281 | 76 | 347 | 1.10e-146 | 415 |
| MS.gene62154.t1 | MTR_8g102980 | 69.173 | 266 | 78 | 1 | 6 | 271 | 76 | 337 | 1.09e-139 | 397 |
| MS.gene62154.t1 | MTR_8g102980 | 47.200 | 125 | 62 | 1 | 148 | 272 | 88 | 208 | 3.98e-31 | 119 |
| MS.gene62154.t1 | MTR_6g087120 | 61.957 | 276 | 101 | 1 | 6 | 281 | 77 | 348 | 1.06e-131 | 377 |
| MS.gene62154.t1 | MTR_3g110185 | 63.768 | 276 | 96 | 1 | 6 | 281 | 550 | 821 | 9.28e-127 | 380 |
| MS.gene62154.t1 | MTR_4g039890 | 61.506 | 239 | 83 | 2 | 31 | 269 | 7 | 236 | 1.32e-107 | 312 |
| MS.gene62154.t1 | MTR_4g039890 | 53.846 | 117 | 49 | 1 | 16 | 132 | 122 | 233 | 6.99e-33 | 121 |
| MS.gene62154.t1 | MTR_4g039890 | 41.071 | 112 | 62 | 1 | 161 | 272 | 7 | 114 | 9.89e-22 | 91.7 |
| MS.gene62154.t1 | MTR_0430s0010 | 42.353 | 85 | 49 | 0 | 95 | 179 | 1 | 85 | 1.64e-19 | 81.3 |
| MS.gene62154.t1 | MTR_4g057685 | 30.263 | 152 | 79 | 4 | 16 | 142 | 29 | 178 | 5.82e-16 | 74.7 |
| MS.gene62154.t1 | MTR_4g057685 | 30.263 | 152 | 79 | 4 | 16 | 142 | 77 | 226 | 2.08e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62154.t1 | AT1G11840 | 76.325 | 283 | 65 | 1 | 1 | 281 | 40 | 322 | 8.06e-165 | 460 |
| MS.gene62154.t1 | AT1G11840 | 76.325 | 283 | 65 | 1 | 1 | 281 | 1 | 283 | 3.50e-164 | 457 |
| MS.gene62154.t1 | AT1G11840 | 76.325 | 283 | 65 | 1 | 1 | 281 | 1 | 283 | 3.50e-164 | 457 |
| MS.gene62154.t1 | AT1G11840 | 76.325 | 283 | 65 | 1 | 1 | 281 | 1 | 283 | 3.50e-164 | 457 |
| MS.gene62154.t1 | AT1G11840 | 76.325 | 283 | 65 | 1 | 1 | 281 | 1 | 283 | 3.50e-164 | 457 |
| MS.gene62154.t1 | AT1G67280 | 68.478 | 276 | 83 | 1 | 6 | 281 | 79 | 350 | 4.79e-143 | 406 |
| MS.gene62154.t1 | AT1G67280 | 69.173 | 266 | 78 | 1 | 16 | 281 | 1 | 262 | 1.18e-138 | 391 |
| MS.gene62154.t1 | AT1G11840 | 73.874 | 222 | 56 | 1 | 1 | 220 | 1 | 222 | 1.94e-122 | 349 |
| MS.gene62154.t1 | AT1G11840 | 43.651 | 126 | 67 | 1 | 146 | 271 | 18 | 139 | 3.20e-28 | 108 |
| MS.gene62154.t1 | AT1G11840 | 44.048 | 84 | 47 | 0 | 16 | 99 | 148 | 231 | 4.14e-17 | 79.0 |
| MS.gene62154.t1 | AT1G08110 | 30.986 | 142 | 71 | 4 | 16 | 132 | 28 | 167 | 3.59e-13 | 67.0 |
| MS.gene62154.t1 | AT1G08110 | 30.986 | 142 | 71 | 4 | 16 | 132 | 28 | 167 | 3.59e-13 | 67.0 |
| MS.gene62154.t1 | AT1G08110 | 30.986 | 142 | 71 | 4 | 16 | 132 | 28 | 167 | 3.59e-13 | 67.0 |
| MS.gene62154.t1 | AT1G08110 | 30.986 | 142 | 71 | 4 | 16 | 132 | 78 | 217 | 6.81e-13 | 67.0 |
Find 65 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCGACGGTTGTCTTTATT+TGG | 0.212475 | 8.4:-1819672 | None:intergenic |
| ATGTTAATTCAACAACAAAA+TGG | 0.256664 | 8.4:-1819928 | None:intergenic |
| TCGGCAACCAGGGCCAATTC+CGG | 0.278686 | 8.4:+1822473 | MS.gene62154:CDS |
| TGGTGTCACGGAATATTCTA+AGG | 0.313238 | 8.4:+1822248 | MS.gene62154:CDS |
| CTCTTCACTCCAGTTCCTTC+AGG | 0.321852 | 8.4:-1822844 | None:intergenic |
| TTGGAGTTGACATATAATTA+TGG | 0.349283 | 8.4:+1822228 | MS.gene62154:CDS |
| CGGCAACCAGGGCCAATTCC+GGG | 0.368992 | 8.4:+1822474 | MS.gene62154:CDS |
| AAGGGAGGCTGGTCCAGTTC+AGG | 0.391742 | 8.4:+1821329 | MS.gene62154:CDS |
| GCAGATGGCTGAGATTGATT+TGG | 0.394382 | 8.4:+1819644 | None:intergenic |
| ACAGTTGTCCCACCCTGAAC+TGG | 0.400562 | 8.4:-1821342 | None:intergenic |
| CAGTACACTATTGCTATACT+TGG | 0.408650 | 8.4:+1822177 | MS.gene62154:intron |
| TACATAGGCTCTGGGCTTGA+AGG | 0.411735 | 8.4:+1821960 | MS.gene62154:intron |
| GGTCGTGAACTATAGGTCTT+TGG | 0.418204 | 8.4:-1821410 | None:intergenic |
| TGTCTATAACAGATTGCTAT+TGG | 0.419396 | 8.4:+1822381 | MS.gene62154:intron |
| TATGATGTTGGAGATGGCTT+TGG | 0.424364 | 8.4:+1821156 | MS.gene62154:CDS |
| CATACTTAATGGTGCGTTCA+AGG | 0.432924 | 8.4:-1819722 | None:intergenic |
| CGAAGCATTATTTGACAGAA+TGG | 0.435714 | 8.4:-1821432 | None:intergenic |
| TTTGTGTTAAGGCCCGGAAT+TGG | 0.437376 | 8.4:-1822486 | None:intergenic |
| TGAAGATTTCCTGAAGGAAC+TGG | 0.439430 | 8.4:+1822835 | MS.gene62154:CDS |
| CTTCATGTTGTTTATCGTGT+TGG | 0.453772 | 8.4:+1819696 | MS.gene62154:CDS |
| CAGAATGGGTCGTGAACTAT+AGG | 0.453922 | 8.4:-1821417 | None:intergenic |
| TGTTAATTCAACAACAAAAT+GGG | 0.458810 | 8.4:-1819927 | None:intergenic |
| CTCCAAGCTCTTGTGTGACT+AGG | 0.460317 | 8.4:-1822440 | None:intergenic |
| GTTGAGCACATTCGTGCTAA+AGG | 0.461496 | 8.4:+1821294 | MS.gene62154:CDS |
| GGAAACATCACCTTGTTCTC+AGG | 0.463793 | 8.4:-1822003 | None:intergenic |
| AGGGAGGCTGGTCCAGTTCA+GGG | 0.464869 | 8.4:+1821330 | MS.gene62154:CDS |
| GCATTGGCATATTTCTCCTC+AGG | 0.482452 | 8.4:-1819878 | None:intergenic |
| GGGAAGATCACTCGGCAACC+AGG | 0.482507 | 8.4:+1822462 | MS.gene62154:CDS |
| GGGCTTGAAGGTGGTGAGGA+AGG | 0.499959 | 8.4:+1821972 | MS.gene62154:CDS |
| AGTGCAAAAGTGTAGCCATC+AGG | 0.500981 | 8.4:-1821384 | None:intergenic |
| AACCTAGTCACACAAGAGCT+TGG | 0.504613 | 8.4:+1822438 | MS.gene62154:CDS |
| GGAAACATCACAAGGGAGGC+TGG | 0.514310 | 8.4:+1821318 | MS.gene62154:CDS |
| AACTGTTATTGCCTTTGTGA+AGG | 0.515188 | 8.4:+1821359 | MS.gene62154:CDS |
| GAAGCATTATTTGACAGAAT+GGG | 0.529984 | 8.4:-1821431 | None:intergenic |
| TTAAGGCCCGGAATTGGCCC+TGG | 0.531090 | 8.4:-1822480 | None:intergenic |
| TGCTATACTTGGGTATAAAG+AGG | 0.540568 | 8.4:+1822188 | MS.gene62154:CDS |
| ATCATATTTACATAGGCTCT+GGG | 0.543253 | 8.4:+1821952 | MS.gene62154:intron |
| GCCAAATCCAAGAAAAGCAT+TGG | 0.543781 | 8.4:-1819894 | None:intergenic |
| GGAAGATCACTCGGCAACCA+GGG | 0.544416 | 8.4:+1822463 | MS.gene62154:CDS |
| TAAGGGAACTGCTTATGCAC+AGG | 0.544828 | 8.4:+1822266 | MS.gene62154:CDS |
| AGGCTGGTCCAGTTCAGGGT+GGG | 0.552550 | 8.4:+1821334 | MS.gene62154:CDS |
| GACATATAATTATGGTGTCA+CGG | 0.562845 | 8.4:+1822236 | MS.gene62154:CDS |
| CTAGTCACACAAGAGCTTGG+AGG | 0.565602 | 8.4:+1822441 | MS.gene62154:CDS |
| GAGGCAGAGAGATGTTCCTG+AGG | 0.566560 | 8.4:+1819862 | MS.gene62154:CDS |
| AGCTTGGAGGGAAGATCACT+CGG | 0.567340 | 8.4:+1822454 | MS.gene62154:CDS |
| CTCTGGGCTTGAAGGTGGTG+AGG | 0.568136 | 8.4:+1821968 | MS.gene62154:CDS |
| GGAGTGACTTCGTATGATGT+TGG | 0.570808 | 8.4:+1821144 | MS.gene62154:CDS |
| TAGTCACACAAGAGCTTGGA+GGG | 0.573746 | 8.4:+1822442 | MS.gene62154:CDS |
| GGAGAACGAAGCAACTGTGT+TGG | 0.581454 | 8.4:+1822209 | MS.gene62154:CDS |
| TGGCTGAGATTGATTTGGAA+TGG | 0.589853 | 8.4:+1819649 | MS.gene62154:CDS |
| GGTTGATAATCCTGAGAACA+AGG | 0.594442 | 8.4:+1821993 | MS.gene62154:CDS |
| ACTTCGTATGATGTTGGAGA+TGG | 0.612590 | 8.4:+1821150 | MS.gene62154:CDS |
| ATAGGCTCTGGGCTTGAAGG+TGG | 0.613134 | 8.4:+1821963 | MS.gene62154:intron |
| TGTCAAATAATGCTTCGCGT+TGG | 0.616848 | 8.4:+1821438 | MS.gene62154:CDS |
| TGACAATGAAGATTTCCTGA+AGG | 0.617117 | 8.4:+1822829 | MS.gene62154:CDS |
| AGTACACTATTGCTATACTT+GGG | 0.617674 | 8.4:+1822178 | MS.gene62154:intron |
| GCCTTTGTGAAGGATCCTGA+TGG | 0.627316 | 8.4:+1821369 | MS.gene62154:CDS |
| CTAAAGGTGGAAACATCACA+AGG | 0.631390 | 8.4:+1821310 | MS.gene62154:CDS |
| GAGCACATTCGTGCTAAAGG+TGG | 0.633141 | 8.4:+1821297 | MS.gene62154:CDS |
| GAGGCTGGTCCAGTTCAGGG+TGG | 0.633429 | 8.4:+1821333 | MS.gene62154:CDS |
| GGTGTCACGGAATATTCTAA+GGG | 0.635272 | 8.4:+1822249 | MS.gene62154:CDS |
| AGGTGGAAACATCACAAGGG+AGG | 0.685845 | 8.4:+1821314 | MS.gene62154:CDS |
| AAACAACATGAAGCAAGCGA+CGG | 0.691881 | 8.4:-1819686 | None:intergenic |
| GCCATCAGGATCCTTCACAA+AGG | 0.716733 | 8.4:-1821370 | None:intergenic |
| TAAAGGTGGAAACATCACAA+GGG | 0.778099 | 8.4:+1821311 | MS.gene62154:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGTGTAAATTAAATT+GGG | - | chr8.4:1820191-1820210 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr8.4:1820227-1820246 | MS.gene62154:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr8.4:1820226-1820245 | MS.gene62154:intron | 10.0% |
| !!! | AAAAACAATCATTTTTAAAA+AGG | - | chr8.4:1820445-1820464 | None:intergenic | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr8.4:1820228-1820247 | MS.gene62154:intron | 15.0% |
| !! | AGATATAAAAAGGAAATTAA+AGG | - | chr8.4:1819978-1819997 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8.4:1820292-1820311 | MS.gene62154:intron | 15.0% |
| !! | CAAAATTGTGTAAATTAAAT+TGG | - | chr8.4:1820192-1820211 | None:intergenic | 15.0% |
| !! | GAGAAATAATAGATATAAAA+AGG | - | chr8.4:1819988-1820007 | None:intergenic | 15.0% |
| !! | GATATAAAAAGGAAATTAAA+GGG | - | chr8.4:1819977-1819996 | None:intergenic | 15.0% |
| !! | TATCTATTTAATTGTATTTG+TGG | + | chr8.4:1822596-1822615 | MS.gene62154:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8.4:1820291-1820310 | MS.gene62154:intron | 15.0% |
| !!! | ATAATTGAACAATTTTATGT+AGG | + | chr8.4:1820909-1820928 | MS.gene62154:intron | 15.0% |
| !!! | ATTGCTTCAATTTTTATTTT+AGG | + | chr8.4:1821260-1821279 | MS.gene62154:intron | 15.0% |
| !!! | GAAAAATTGTATATTTTCTA+AGG | + | chr8.4:1820941-1820960 | MS.gene62154:intron | 15.0% |
| !!! | TTTATTTTAGGTTTACAAAT+TGG | + | chr8.4:1821272-1821291 | MS.gene62154:intron | 15.0% |
| !!! | TTTTTTTTTTTCTTATCACA+TGG | + | chr8.4:1821062-1821081 | MS.gene62154:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8.4:1820251-1820270 | MS.gene62154:intron | 20.0% |
| !! | ACCTAATTAATCCTAATATA+AGG | + | chr8.4:1821675-1821694 | MS.gene62154:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr8.4:1820324-1820343 | MS.gene62154:intron | 20.0% |
| !! | ATGATCTTATTGTTAGATTA+TGG | + | chr8.4:1821123-1821142 | MS.gene62154:intron | 20.0% |
| !! | ATGTTAATTCAACAACAAAA+TGG | - | chr8.4:1819931-1819950 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr8.4:1820325-1820344 | MS.gene62154:intron | 20.0% |
| !! | TCCTTATATTAGGATTAATT+AGG | - | chr8.4:1821679-1821698 | None:intergenic | 20.0% |
| !! | TGTTAATTCAACAACAAAAT+GGG | - | chr8.4:1819930-1819949 | None:intergenic | 20.0% |
| !!! | AACAAAAAAAGCATACTTAA+TGG | - | chr8.4:1819736-1819755 | None:intergenic | 20.0% |
| !!! | CAATTTTACAAAAATGAAAG+AGG | - | chr8.4:1822626-1822645 | None:intergenic | 20.0% |
| !!! | TACCTTTTCATAAAACTTTA+TGG | - | chr8.4:1821478-1821497 | None:intergenic | 20.0% |
| !!! | TATTTCTCTTCATTAGTTTT+AGG | + | chr8.4:1820000-1820019 | MS.gene62154:intron | 20.0% |
| !!! | TTCATTTCTTTTGTGTAAAA+AGG | - | chr8.4:1820591-1820610 | None:intergenic | 20.0% |
| !!! | TTGTATGGATGAATTTTATA+GGG | + | chr8.4:1820969-1820988 | MS.gene62154:intron | 20.0% |
| !!! | TTTGTATGGATGAATTTTAT+AGG | + | chr8.4:1820968-1820987 | MS.gene62154:intron | 20.0% |
| !!! | TTTTTACACAAAAGAAATGA+AGG | + | chr8.4:1820590-1820609 | MS.gene62154:intron | 20.0% |
| ! | ACAAAAGAACAAAAACTTAG+AGG | + | chr8.4:1820636-1820655 | MS.gene62154:intron | 25.0% |
| ! | AGGGACAATCATAATTTAAT+AGG | - | chr8.4:1820052-1820071 | None:intergenic | 25.0% |
| ! | CTTATGGATCATATTTACAT+AGG | + | chr8.4:1821945-1821964 | MS.gene62154:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8.4:1820250-1820269 | MS.gene62154:intron | 25.0% |
| ! | GAAGAAAGATAATGAGAATT+TGG | - | chr8.4:1822660-1822679 | None:intergenic | 25.0% |
| ! | GGGACAATCATAATTTAATA+GGG | - | chr8.4:1820051-1820070 | None:intergenic | 25.0% |
| ! | TGCATTATTTAAACCAAATG+TGG | + | chr8.4:1821901-1821920 | MS.gene62154:intron | 25.0% |
| ! | TTGGAGTTGACATATAATTA+TGG | + | chr8.4:1822228-1822247 | MS.gene62154:CDS | 25.0% |
| ! | TTGTGTAAATTAAATTGGGA+CGG | - | chr8.4:1820187-1820206 | None:intergenic | 25.0% |
| !! | TCTTATTTAACTTAGTTGTG+CGG | + | chr8.4:1821010-1821029 | MS.gene62154:intron | 25.0% |
| !! | TTTTGTTCTTTTGTTGCTAA+AGG | - | chr8.4:1820630-1820649 | None:intergenic | 25.0% |
| !!! | AGATGAGTGTTTTTTTCTTT+TGG | + | chr8.4:1820478-1820497 | MS.gene62154:intron | 25.0% |
| !!! | GTGTTTTTAGTCAAGAAAAT+AGG | + | chr8.4:1820883-1820902 | MS.gene62154:intron | 25.0% |
| !!! | TTTTCTAAGGACTTTTTGTA+TGG | + | chr8.4:1820954-1820973 | MS.gene62154:intron | 25.0% |
| !!! | TTTTGGGAATTTAGATGATT+AGG | - | chr8.4:1820702-1820721 | None:intergenic | 25.0% |
| AATACATTACATTACAGACC+AGG | + | chr8.4:1821645-1821664 | MS.gene62154:intron | 30.0% | |
| AATCATATCATACTTATGCG+AGG | - | chr8.4:1821740-1821759 | None:intergenic | 30.0% | |
| ACAATCCAAGACATATTTCT+AGG | + | chr8.4:1821498-1821517 | MS.gene62154:intron | 30.0% | |
| ACATGATGTTAGAAACCTAT+AGG | - | chr8.4:1822784-1822803 | None:intergenic | 30.0% | |
| AGAAAATGAGTCAGTTATTC+CGG | + | chr8.4:1820373-1820392 | MS.gene62154:intron | 30.0% | |
| AGTACACTATTGCTATACTT+GGG | + | chr8.4:1822178-1822197 | MS.gene62154:intron | 30.0% | |
| ATCATATTTACATAGGCTCT+GGG | + | chr8.4:1821952-1821971 | MS.gene62154:intron | 30.0% | |
| GAATTTAGATGATTAGGAAG+GGG | - | chr8.4:1820696-1820715 | None:intergenic | 30.0% | |
| GCACAACTAAGTTAAATAAG+AGG | - | chr8.4:1821011-1821030 | None:intergenic | 30.0% | |
| GGAATTTAGATGATTAGGAA+GGG | - | chr8.4:1820697-1820716 | None:intergenic | 30.0% | |
| TAAATTGCGAACCAGAATTA+AGG | + | chr8.4:1820559-1820578 | MS.gene62154:intron | 30.0% | |
| TAACTACATTGCAAAGAAAG+AGG | - | chr8.4:1822034-1822053 | None:intergenic | 30.0% | |
| TCATATTCATGTCTTGGATA+TGG | + | chr8.4:1819797-1819816 | MS.gene62154:intron | 30.0% | |
| TCTATGCTTTCTGATTAGAA+TGG | - | chr8.4:1822084-1822103 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8.4:1820235-1820254 | MS.gene62154:intron | 30.0% | |
| TGTCTATAACAGATTGCTAT+TGG | + | chr8.4:1822381-1822400 | MS.gene62154:intron | 30.0% | |
| TTCTTCCTAGAAATATGTCT+TGG | - | chr8.4:1821506-1821525 | None:intergenic | 30.0% | |
| ! | AAATATGCCAATGCTTTTCT+TGG | + | chr8.4:1819887-1819906 | MS.gene62154:CDS | 30.0% |
| ! | AAGAAACGACTTTTGTGTTA+AGG | - | chr8.4:1822500-1822519 | None:intergenic | 30.0% |
| ! | GAAGCATTATTTGACAGAAT+GGG | - | chr8.4:1821434-1821453 | None:intergenic | 30.0% |
| ! | GACATATAATTATGGTGTCA+CGG | + | chr8.4:1822236-1822255 | MS.gene62154:CDS | 30.0% |
| ! | GGTGAAGAATTTGATGATAA+CGG | - | chr8.4:1822686-1822705 | None:intergenic | 30.0% |
| ! | GTATTGTGTTATTCCCATTT+GGG | - | chr8.4:1821630-1821649 | None:intergenic | 30.0% |
| ! | GTGAAGAATTTGATGATAAC+GGG | - | chr8.4:1822685-1822704 | None:intergenic | 30.0% |
| ! | TCTTTTGTGTAAAAAGGTTC+AGG | - | chr8.4:1820585-1820604 | None:intergenic | 30.0% |
| ! | TGTATTGTGTTATTCCCATT+TGG | - | chr8.4:1821631-1821650 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr8.4:1820338-1820357 | MS.gene62154:intron | 30.0% |
| !! | ATTAATTAGGTTGATCTACC+TGG | - | chr8.4:1821666-1821685 | None:intergenic | 30.0% |
| !! | CGCCATAAAGTTTTATGAAA+AGG | + | chr8.4:1821473-1821492 | MS.gene62154:CDS | 30.0% |
| !! | TCATTTTTGTCCCATAAGTA+CGG | - | chr8.4:1820863-1820882 | None:intergenic | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr8.4:1820339-1820358 | MS.gene62154:intron | 30.0% |
| !! | TGCAGTATGATTTTGCTTTT+GGG | - | chr8.4:1820718-1820737 | None:intergenic | 30.0% |
| !!! | GTTTCTTTTTTAGATCCAGA+TGG | + | chr8.4:1822513-1822532 | MS.gene62154:CDS | 30.0% |
| !!! | TTCTTTCAGGTTTTATACTG+AGG | + | chr8.4:1819820-1819839 | MS.gene62154:intron | 30.0% |
| AAAGAAATGAAGGAAGCCTA+AGG | + | chr8.4:1820600-1820619 | MS.gene62154:intron | 35.0% | |
| AACTGTTATTGCCTTTGTGA+AGG | + | chr8.4:1821359-1821378 | MS.gene62154:CDS | 35.0% | |
| ACAAATGCATCAATGCCTAT+AGG | + | chr8.4:1822766-1822785 | MS.gene62154:intron | 35.0% | |
| CAAAAGCAAAATCATACTGC+AGG | + | chr8.4:1820717-1820736 | MS.gene62154:intron | 35.0% | |
| CAAATGTGGTTTATTAACCG+AGG | + | chr8.4:1821915-1821934 | MS.gene62154:intron | 35.0% | |
| CAGTACACTATTGCTATACT+TGG | + | chr8.4:1822177-1822196 | MS.gene62154:intron | 35.0% | |
| CTCGGTTAATAAACCACATT+TGG | - | chr8.4:1821917-1821936 | None:intergenic | 35.0% | |
| GAAAATGAGTCAGTTATTCC+GGG | + | chr8.4:1820374-1820393 | MS.gene62154:intron | 35.0% | |
| GATCATATTTACATAGGCTC+TGG | + | chr8.4:1821951-1821970 | MS.gene62154:intron | 35.0% | |
| GCATCATCATATTCATGTCT+TGG | + | chr8.4:1819791-1819810 | MS.gene62154:intron | 35.0% | |
| GGGAATTTAGATGATTAGGA+AGG | - | chr8.4:1820698-1820717 | None:intergenic | 35.0% | |
| TAAAGGTGGAAACATCACAA+GGG | + | chr8.4:1821311-1821330 | MS.gene62154:CDS | 35.0% | |
| TAACTTAGTTGTGCGGAATT+AGG | + | chr8.4:1821017-1821036 | MS.gene62154:intron | 35.0% | |
| TGACAATGAAGATTTCCTGA+AGG | + | chr8.4:1822829-1822848 | MS.gene62154:CDS | 35.0% | |
| TGCTATACTTGGGTATAAAG+AGG | + | chr8.4:1822188-1822207 | MS.gene62154:CDS | 35.0% | |
| TGTAAATTAAATTGGGACGG+AGG | - | chr8.4:1820184-1820203 | None:intergenic | 35.0% | |
| ! | CATGTTAATTTTGTGTGTGC+AGG | + | chr8.4:1822799-1822818 | MS.gene62154:intron | 35.0% |
| ! | CGAAGCATTATTTGACAGAA+TGG | - | chr8.4:1821435-1821454 | None:intergenic | 35.0% |
| ! | CTGCAGTATGATTTTGCTTT+TGG | - | chr8.4:1820719-1820738 | None:intergenic | 35.0% |
| ! | CTTCATGTTGTTTATCGTGT+TGG | + | chr8.4:1819696-1819715 | MS.gene62154:CDS | 35.0% |
| ! | GAAAGCTAGTTTAAGCTTCA+AGG | - | chr8.4:1822317-1822336 | None:intergenic | 35.0% |
| ! | GACATGAATATGATGATGCA+TGG | - | chr8.4:1819790-1819809 | None:intergenic | 35.0% |
| ! | TTTTCGCTTTGCTTCTATTC+AGG | + | chr8.4:1822556-1822575 | MS.gene62154:intron | 35.0% |
| !! | AAGAATTTGATGATAACGGG+AGG | - | chr8.4:1822682-1822701 | None:intergenic | 35.0% |
| !! | TAAGGTTTTGTACGAGAGTT+TGG | - | chr8.4:1822720-1822739 | None:intergenic | 35.0% |
| !!! | CTTTTTTAGATCCAGATGGA+TGG | + | chr8.4:1822517-1822536 | MS.gene62154:CDS | 35.0% |
| AAACAACATGAAGCAAGCGA+CGG | - | chr8.4:1819689-1819708 | None:intergenic | 40.0% | |
| AAAGGTTCAGGCCTTAATTC+TGG | - | chr8.4:1820573-1820592 | None:intergenic | 40.0% | |
| AACACAACAGATACAAAGCC+TGG | + | chr8.4:1821577-1821596 | MS.gene62154:intron | 40.0% | |
| AAGCGACGGTTGTCTTTATT+TGG | - | chr8.4:1819675-1819694 | None:intergenic | 40.0% | |
| ACACAACAGATACAAAGCCT+GGG | + | chr8.4:1821578-1821597 | MS.gene62154:intron | 40.0% | |
| ACCGTTTGAACCGTACTTAT+GGG | + | chr8.4:1820850-1820869 | MS.gene62154:intron | 40.0% | |
| ACTCTCGTACAAAACCTTAG+TGG | + | chr8.4:1822721-1822740 | MS.gene62154:intron | 40.0% | |
| ACTTCGTATGATGTTGGAGA+TGG | + | chr8.4:1821150-1821169 | MS.gene62154:CDS | 40.0% | |
| AGTACGGTTCAAACGGTAAA+AGG | - | chr8.4:1820847-1820866 | None:intergenic | 40.0% | |
| AGTGGTAGATTTACCCTTCT+TGG | + | chr8.4:1820740-1820759 | MS.gene62154:intron | 40.0% | |
| CATACTTAATGGTGCGTTCA+AGG | - | chr8.4:1819725-1819744 | None:intergenic | 40.0% | |
| CTAAAGGTGGAAACATCACA+AGG | + | chr8.4:1821310-1821329 | MS.gene62154:CDS | 40.0% | |
| GATCCATAAGAACATAGCCT+CGG | - | chr8.4:1821935-1821954 | None:intergenic | 40.0% | |
| GGAGGGATATTTGATGTGTT+GGG | - | chr8.4:1820822-1820841 | None:intergenic | 40.0% | |
| GTCTTGGATATGGTTCTTTC+AGG | + | chr8.4:1819807-1819826 | MS.gene62154:intron | 40.0% | |
| TAACCGAGGCTATGTTCTTA+TGG | + | chr8.4:1821929-1821948 | MS.gene62154:intron | 40.0% | |
| TACCGTTTGAACCGTACTTA+TGG | + | chr8.4:1820849-1820868 | MS.gene62154:intron | 40.0% | |
| TATGATGTTGGAGATGGCTT+TGG | + | chr8.4:1821156-1821175 | MS.gene62154:CDS | 40.0% | |
| TCCCATAAGTACGGTTCAAA+CGG | - | chr8.4:1820854-1820873 | None:intergenic | 40.0% | |
| TCGTACAAAACCTTAGTGGT+CGG | + | chr8.4:1822725-1822744 | MS.gene62154:intron | 40.0% | |
| TGAAGATTTCCTGAAGGAAC+TGG | + | chr8.4:1822835-1822854 | MS.gene62154:CDS | 40.0% | |
| TGGAGGGATATTTGATGTGT+TGG | - | chr8.4:1820823-1820842 | None:intergenic | 40.0% | |
| TGTCAAATAATGCTTCGCGT+TGG | + | chr8.4:1821438-1821457 | MS.gene62154:CDS | 40.0% | |
| TGTTGCTAAAGGATAGCCTT+AGG | - | chr8.4:1820619-1820638 | None:intergenic | 40.0% | |
| ! | AATTTTGTGTGTGCAGGTGT+TGG | + | chr8.4:1822805-1822824 | MS.gene62154:intron | 40.0% |
| ! | ATTGCAAAGAAAGAGGCATG+AGG | - | chr8.4:1822027-1822046 | None:intergenic | 40.0% |
| ! | CTCTTGGGATGAAACTTTTG+AGG | + | chr8.4:1819843-1819862 | MS.gene62154:CDS | 40.0% |
| ! | CTTACAGTTTTCCATCCATC+TGG | - | chr8.4:1822531-1822550 | None:intergenic | 40.0% |
| ! | GCATTGATGCATTTGTCATG+TGG | - | chr8.4:1822762-1822781 | None:intergenic | 40.0% |
| ! | GCCAAATCCAAGAAAAGCAT+TGG | - | chr8.4:1819897-1819916 | None:intergenic | 40.0% |
| ! | GCCAATGCTTTTCTTGGATT+TGG | + | chr8.4:1819893-1819912 | MS.gene62154:CDS | 40.0% |
| ! | GGTGTCACGGAATATTCTAA+GGG | + | chr8.4:1822249-1822268 | MS.gene62154:CDS | 40.0% |
| !! | AGGTTTTATACTGAGGCTCT+TGG | + | chr8.4:1819827-1819846 | MS.gene62154:intron | 40.0% |
| !! | GGTTGATAATCCTGAGAACA+AGG | + | chr8.4:1821993-1822012 | MS.gene62154:CDS | 40.0% |
| !! | GGTTTTATACTGAGGCTCTT+GGG | + | chr8.4:1819828-1819847 | MS.gene62154:intron | 40.0% |
| !! | TGAGGAGTGCTCCTTATATT+AGG | - | chr8.4:1821689-1821708 | None:intergenic | 40.0% |
| !! | TGGCTGAGATTGATTTGGAA+TGG | + | chr8.4:1819649-1819668 | MS.gene62154:CDS | 40.0% |
| !! | TGGTGTCACGGAATATTCTA+AGG | + | chr8.4:1822248-1822267 | MS.gene62154:CDS | 40.0% |
| AACCTAGTCACACAAGAGCT+TGG | + | chr8.4:1822438-1822457 | MS.gene62154:CDS | 45.0% | |
| ACAACAGATACAAAGCCTGG+GGG | + | chr8.4:1821580-1821599 | MS.gene62154:intron | 45.0% | |
| AGATTTACCCTTCTTGGAGC+AGG | + | chr8.4:1820746-1820765 | MS.gene62154:intron | 45.0% | |
| AGCCTGCCATGATAAGCAAA+GGG | + | chr8.4:1820659-1820678 | MS.gene62154:intron | 45.0% | |
| ATGAGTCAGTTATTCCGGGA+CGG | + | chr8.4:1820378-1820397 | MS.gene62154:intron | 45.0% | |
| CACAACAGATACAAAGCCTG+GGG | + | chr8.4:1821579-1821598 | MS.gene62154:intron | 45.0% | |
| CAGAATGGGTCGTGAACTAT+AGG | - | chr8.4:1821420-1821439 | None:intergenic | 45.0% | |
| GAGAGTTTGGAGGAAAAGGA+AGG | - | chr8.4:1822707-1822726 | None:intergenic | 45.0% | |
| GCAAAATCATACTGCAGGAG+TGG | + | chr8.4:1820722-1820741 | MS.gene62154:intron | 45.0% | |
| GCGCATCTCTGTACGATTAA+TGG | + | chr8.4:1822338-1822357 | MS.gene62154:intron | 45.0% | |
| GGAAACATCACCTTGTTCTC+AGG | - | chr8.4:1822006-1822025 | None:intergenic | 45.0% | |
| GGAGTGACTTCGTATGATGT+TGG | + | chr8.4:1821144-1821163 | MS.gene62154:CDS | 45.0% | |
| GGTCGTGAACTATAGGTCTT+TGG | - | chr8.4:1821413-1821432 | None:intergenic | 45.0% | |
| GTACGAGAGTTTGGAGGAAA+AGG | - | chr8.4:1822711-1822730 | None:intergenic | 45.0% | |
| GTTGAGCACATTCGTGCTAA+AGG | + | chr8.4:1821294-1821313 | MS.gene62154:CDS | 45.0% | |
| TAAGGGAACTGCTTATGCAC+AGG | + | chr8.4:1822266-1822285 | MS.gene62154:CDS | 45.0% | |
| TAGTCACACAAGAGCTTGGA+GGG | + | chr8.4:1822442-1822461 | MS.gene62154:CDS | 45.0% | |
| TCAAACGGTAAAAGGCTGGA+GGG | - | chr8.4:1820839-1820858 | None:intergenic | 45.0% | |
| TCATACTTATGCGAGGAGTG+TGG | - | chr8.4:1821733-1821752 | None:intergenic | 45.0% | |
| TGACCAGGTACAACCCAAAT+GGG | + | chr8.4:1821614-1821633 | MS.gene62154:intron | 45.0% | |
| TGCAGAGAAGTGGAGAATTG+CGG | + | chr8.4:1820782-1820801 | MS.gene62154:intron | 45.0% | |
| TTCAAACGGTAAAAGGCTGG+AGG | - | chr8.4:1820840-1820859 | None:intergenic | 45.0% | |
| TTGCAGCCCTTTGCTTATCA+TGG | - | chr8.4:1820668-1820687 | None:intergenic | 45.0% | |
| TTTGTGTTAAGGCCCGGAAT+TGG | - | chr8.4:1822489-1822508 | None:intergenic | 45.0% | |
| ! | ACGACTTTTGTGTTAAGGCC+CGG | - | chr8.4:1822495-1822514 | None:intergenic | 45.0% |
| ! | AGTGCAAAAGTGTAGCCATC+AGG | - | chr8.4:1821387-1821406 | None:intergenic | 45.0% |
| ! | GCATTGGCATATTTCTCCTC+AGG | - | chr8.4:1819881-1819900 | None:intergenic | 45.0% |
| !! | ATTCCCATTTGGGTTGTACC+TGG | - | chr8.4:1821620-1821639 | None:intergenic | 45.0% |
| !! | ATTTGGGTTGTACCTGGTCA+GGG | - | chr8.4:1821614-1821633 | None:intergenic | 45.0% |
| !! | GGTTTTGTACGAGAGTTTGG+AGG | - | chr8.4:1822717-1822736 | None:intergenic | 45.0% |
| AGCCCTTTGCTTATCATGGC+AGG | - | chr8.4:1820664-1820683 | None:intergenic | 50.0% | |
| AGCTTGGAGGGAAGATCACT+CGG | + | chr8.4:1822454-1822473 | MS.gene62154:CDS | 50.0% | |
| AGGTGGAAACATCACAAGGG+AGG | + | chr8.4:1821314-1821333 | MS.gene62154:CDS | 50.0% | |
| CATTCACTGACCGACCACTA+AGG | - | chr8.4:1822738-1822757 | None:intergenic | 50.0% | |
| CGGTTCAAACGGTAAAAGGC+TGG | - | chr8.4:1820843-1820862 | None:intergenic | 50.0% | |
| CTAGTCACACAAGAGCTTGG+AGG | + | chr8.4:1822441-1822460 | MS.gene62154:CDS | 50.0% | |
| CTCCAAGCTCTTGTGTGACT+AGG | - | chr8.4:1822443-1822462 | None:intergenic | 50.0% | |
| CTGACCAGGTACAACCCAAA+TGG | + | chr8.4:1821613-1821632 | MS.gene62154:intron | 50.0% | |
| GAGCACATTCGTGCTAAAGG+TGG | + | chr8.4:1821297-1821316 | MS.gene62154:CDS | 50.0% | |
| GAGCCTGCCATGATAAGCAA+AGG | + | chr8.4:1820658-1820677 | MS.gene62154:intron | 50.0% | |
| GCCATCAGGATCCTTCACAA+AGG | - | chr8.4:1821373-1821392 | None:intergenic | 50.0% | |
| GCCTTTGTGAAGGATCCTGA+TGG | + | chr8.4:1821369-1821388 | MS.gene62154:CDS | 50.0% | |
| GGACACTAAGTGCAGAGAAG+TGG | + | chr8.4:1820772-1820791 | MS.gene62154:intron | 50.0% | |
| GGAGAACGAAGCAACTGTGT+TGG | + | chr8.4:1822209-1822228 | MS.gene62154:CDS | 50.0% | |
| GTCCTTACCTGCTCCAAGAA+GGG | - | chr8.4:1820756-1820775 | None:intergenic | 50.0% | |
| TACCCTTCTTGGAGCAGGTA+AGG | + | chr8.4:1820751-1820770 | MS.gene62154:intron | 50.0% | |
| TGTCCTTACCTGCTCCAAGA+AGG | - | chr8.4:1820757-1820776 | None:intergenic | 50.0% | |
| !! | CATTTGGGTTGTACCTGGTC+AGG | - | chr8.4:1821615-1821634 | None:intergenic | 50.0% |
| !! | TACATAGGCTCTGGGCTTGA+AGG | + | chr8.4:1821960-1821979 | MS.gene62154:intron | 50.0% |
| ACAGTTGTCCCACCCTGAAC+TGG | - | chr8.4:1821345-1821364 | None:intergenic | 55.0% | |
| ACTACATACTCCCTCCGTCC+CGG | - | chr8.4:1820395-1820414 | None:intergenic | 55.0% | |
| AGTCAGTTATTCCGGGACGG+AGG | + | chr8.4:1820381-1820400 | MS.gene62154:intron | 55.0% | |
| GAGGCAGAGAGATGTTCCTG+AGG | + | chr8.4:1819862-1819881 | MS.gene62154:CDS | 55.0% | |
| GGAAACATCACAAGGGAGGC+TGG | + | chr8.4:1821318-1821337 | MS.gene62154:CDS | 55.0% | |
| GGAAGATCACTCGGCAACCA+GGG | + | chr8.4:1822463-1822482 | MS.gene62154:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr8.4:1820382-1820401 | MS.gene62154:intron | 55.0% | |
| !! | ATAGGCTCTGGGCTTGAAGG+TGG | + | chr8.4:1821963-1821982 | MS.gene62154:intron | 55.0% |
| CTCTGGGCTTGAAGGTGGTG+AGG | + | chr8.4:1821968-1821987 | MS.gene62154:CDS | 60.0% | |
| GGGAAGATCACTCGGCAACC+AGG | + | chr8.4:1822462-1822481 | MS.gene62154:CDS | 60.0% | |
| GGGCTTGAAGGTGGTGAGGA+AGG | + | chr8.4:1821972-1821991 | MS.gene62154:CDS | 60.0% | |
| GGGGACATTAGACCCTGACC+AGG | + | chr8.4:1821599-1821618 | MS.gene62154:intron | 60.0% | |
| GTCAGGGTCTAATGTCCCCC+AGG | - | chr8.4:1821598-1821617 | None:intergenic | 60.0% | |
| TCGGCAACCAGGGCCAATTC+CGG | + | chr8.4:1822473-1822492 | MS.gene62154:CDS | 60.0% | |
| TGTGCTGGGTTGCGTTCGTG+AGG | - | chr8.4:1821707-1821726 | None:intergenic | 60.0% | |
| TTAAGGCCCGGAATTGGCCC+TGG | - | chr8.4:1822483-1822502 | None:intergenic | 60.0% | |
| ! | AAGGGAGGCTGGTCCAGTTC+AGG | + | chr8.4:1821329-1821348 | MS.gene62154:CDS | 60.0% |
| ! | AGGCTGGTCCAGTTCAGGGT+GGG | + | chr8.4:1821334-1821353 | MS.gene62154:CDS | 60.0% |
| ! | AGGGAGGCTGGTCCAGTTCA+GGG | + | chr8.4:1821330-1821349 | MS.gene62154:CDS | 60.0% |
| ! | GAGGAGTGTGGCAGTGTGCT+GGG | - | chr8.4:1821721-1821740 | None:intergenic | 60.0% |
| CGGCAACCAGGGCCAATTCC+GGG | + | chr8.4:1822474-1822493 | MS.gene62154:CDS | 65.0% | |
| ! | CGAGGAGTGTGGCAGTGTGC+TGG | - | chr8.4:1821722-1821741 | None:intergenic | 65.0% |
| ! | GAGGCTGGTCCAGTTCAGGG+TGG | + | chr8.4:1821333-1821352 | MS.gene62154:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1819648 | 1822862 | 1819648 | ID=MS.gene62154 |
| chr8.4 | mRNA | 1819648 | 1822862 | 1819648 | ID=MS.gene62154.t1;Parent=MS.gene62154 |
| chr8.4 | exon | 1819648 | 1819739 | 1819648 | ID=MS.gene62154.t1.exon1;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1819648 | 1819739 | 1819648 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1819829 | 1819953 | 1819829 | ID=MS.gene62154.t1.exon2;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1819829 | 1819953 | 1819829 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1821139 | 1821203 | 1821139 | ID=MS.gene62154.t1.exon3;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1821139 | 1821203 | 1821139 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1821282 | 1821494 | 1821282 | ID=MS.gene62154.t1.exon4;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1821282 | 1821494 | 1821282 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1821967 | 1822014 | 1821967 | ID=MS.gene62154.t1.exon5;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1821967 | 1822014 | 1821967 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1822180 | 1822287 | 1822180 | ID=MS.gene62154.t1.exon6;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1822180 | 1822287 | 1822180 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1822393 | 1822545 | 1822393 | ID=MS.gene62154.t1.exon7;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1822393 | 1822545 | 1822393 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| chr8.4 | exon | 1822821 | 1822862 | 1822821 | ID=MS.gene62154.t1.exon8;Parent=MS.gene62154.t1 |
| chr8.4 | CDS | 1822821 | 1822862 | 1822821 | ID=cds.MS.gene62154.t1;Parent=MS.gene62154.t1 |
| Gene Sequence |
| Protein sequence |
