Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64677.t1 | XP_003612038.1 | 95.5 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 1.70E-245 | 858.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64677.t1 | O95714 | 29.3 | 372 | 203 | 8 | 77 | 441 | 2954 | 3272 | 8.9e-30 | 132.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64677.t1 | G7KEX6 | 95.5 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 1.2e-245 | 858.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene64677 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene049190 | MS.gene64677 | 0.808136 | 3.59E-50 | -1.69E-46 |
| MS.gene049255 | MS.gene64677 | 0.826562 | 2.53E-54 | -1.69E-46 |
| MS.gene049341 | MS.gene64677 | 0.825088 | 5.67E-54 | -1.69E-46 |
| MS.gene049404 | MS.gene64677 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene049808 | MS.gene64677 | 0.832789 | 7.74E-56 | -1.69E-46 |
| MS.gene049821 | MS.gene64677 | 0.802751 | 4.83E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene64677 | 0.820215 | 7.72E-53 | -1.69E-46 |
| MS.gene05016 | MS.gene64677 | 0.824627 | 7.28E-54 | -1.69E-46 |
| MS.gene050273 | MS.gene64677 | 0.803212 | 3.88E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene64677 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene64677 | 0.811999 | 5.29E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene64677 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene64677 | 0.850136 | 2.06E-60 | -1.69E-46 |
| MS.gene050807 | MS.gene64677 | 0.827798 | 1.28E-54 | -1.69E-46 |
| MS.gene050901 | MS.gene64677 | 0.803663 | 3.13E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene64677 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene64677 | 0.814676 | 1.36E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene64677 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene64677 | 0.818011 | 2.45E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene64677 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene052133 | MS.gene64677 | 0.81196 | 5.39E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene64677 | 0.844141 | 9.09E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene64677 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene64677 | 0.819166 | 1.34E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene64677 | 0.809027 | 2.32E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene64677 | 0.816555 | 5.20E-52 | -1.69E-46 |
| MS.gene052880 | MS.gene64677 | 0.807914 | 4.00E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene64677 | 0.821947 | 3.08E-53 | -1.69E-46 |
| MS.gene053542 | MS.gene64677 | 0.805001 | 1.65E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene64677 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene64677 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene64677 | 0.853574 | 2.18E-61 | -1.69E-46 |
| MS.gene054651 | MS.gene64677 | 0.826099 | 3.27E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene64677 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene64677 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene64677 | 0.827925 | 1.20E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene64677 | 0.807894 | 4.04E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene64677 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene64677 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene64677 | 0.818683 | 1.73E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene64677 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene64677 | 0.821358 | 4.21E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene64677 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene057694 | MS.gene64677 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene64677 | 0.827433 | 1.57E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene64677 | 0.804 | 2.67E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene64677 | 0.833475 | 5.22E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene64677 | 0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene64677 | 0.821289 | 4.37E-53 | -1.69E-46 |
| MS.gene058634 | MS.gene64677 | 0.829384 | 5.31E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene64677 | 0.810689 | 1.02E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene64677 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene059015 | MS.gene64677 | 0.801483 | 8.82E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene64677 | 0.857387 | 1.69E-62 | -1.69E-46 |
| MS.gene060194 | MS.gene64677 | 0.811685 | 6.19E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene64677 | 0.838616 | 2.59E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene64677 | 0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene061176 | MS.gene64677 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene061177 | MS.gene64677 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene061178 | MS.gene64677 | 0.809958 | 1.46E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64677 | MS.gene050535 | PPI |
| MS.gene64677 | MS.gene050470 | PPI |
| MS.gene64677 | MS.gene024337 | PPI |
| MS.gene64677 | MS.gene51922 | PPI |
| MS.gene64677 | MS.gene024340 | PPI |
| MS.gene52283 | MS.gene64677 | PPI |
| MS.gene64677 | MS.gene024564 | PPI |
| MS.gene64677 | MS.gene026015 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64677.t1 | MTR_5g020630 | 95.495 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 0.0 | 843 |
| MS.gene64677.t1 | MTR_0024s0070 | 28.926 | 363 | 208 | 9 | 86 | 420 | 7 | 347 | 3.83e-27 | 112 |
| MS.gene64677.t1 | MTR_0024s0070 | 39.007 | 141 | 83 | 2 | 64 | 203 | 196 | 334 | 1.22e-20 | 94.0 |
| MS.gene64677.t1 | MTR_0024s0070 | 23.052 | 308 | 187 | 6 | 137 | 442 | 4 | 263 | 1.09e-13 | 72.8 |
| MS.gene64677.t1 | MTR_8g094410 | 26.146 | 371 | 208 | 12 | 62 | 423 | 12 | 325 | 1.10e-25 | 107 |
| MS.gene64677.t1 | MTR_8g094410 | 35.829 | 187 | 107 | 6 | 31 | 215 | 93 | 268 | 4.57e-18 | 85.9 |
| MS.gene64677.t1 | MTR_8g094410 | 23.841 | 302 | 189 | 7 | 165 | 442 | 8 | 292 | 3.53e-16 | 80.1 |
| MS.gene64677.t1 | MTR_8g094410 | 26.146 | 371 | 208 | 12 | 62 | 423 | 12 | 325 | 1.52e-25 | 108 |
| MS.gene64677.t1 | MTR_8g094410 | 34.409 | 186 | 111 | 5 | 31 | 215 | 93 | 268 | 6.47e-18 | 85.9 |
| MS.gene64677.t1 | MTR_8g094410 | 23.684 | 304 | 187 | 7 | 165 | 442 | 8 | 292 | 1.11e-15 | 79.0 |
| MS.gene64677.t1 | MTR_8g094410 | 25.490 | 408 | 229 | 13 | 26 | 423 | 32 | 374 | 1.86e-25 | 107 |
| MS.gene64677.t1 | MTR_8g094410 | 24.742 | 388 | 227 | 11 | 62 | 442 | 12 | 341 | 1.51e-22 | 99.4 |
| MS.gene64677.t1 | MTR_8g094410 | 25.664 | 339 | 179 | 11 | 116 | 443 | 14 | 290 | 1.07e-15 | 79.0 |
| MS.gene64677.t1 | MTR_8g094410 | 25.735 | 408 | 228 | 14 | 26 | 423 | 32 | 374 | 2.74e-25 | 107 |
| MS.gene64677.t1 | MTR_8g094410 | 24.742 | 388 | 227 | 11 | 62 | 442 | 12 | 341 | 2.05e-22 | 99.8 |
| MS.gene64677.t1 | MTR_8g094410 | 25.074 | 339 | 181 | 10 | 116 | 443 | 14 | 290 | 7.02e-16 | 79.7 |
| MS.gene64677.t1 | MTR_3g096780 | 26.392 | 413 | 219 | 17 | 26 | 423 | 34 | 376 | 2.91e-24 | 104 |
| MS.gene64677.t1 | MTR_3g096780 | 23.232 | 396 | 235 | 9 | 56 | 442 | 8 | 343 | 7.33e-22 | 97.8 |
| MS.gene64677.t1 | MTR_3g096780 | 27.302 | 315 | 158 | 10 | 141 | 444 | 39 | 293 | 6.60e-20 | 92.0 |
| MS.gene64677.t1 | MTR_3g096780 | 25.212 | 353 | 192 | 12 | 28 | 372 | 89 | 377 | 3.98e-18 | 86.7 |
| MS.gene64677.t1 | MTR_3g096780 | 29.961 | 257 | 155 | 9 | 28 | 273 | 141 | 383 | 8.15e-17 | 82.8 |
| MS.gene64677.t1 | MTR_1g099220 | 26.585 | 410 | 221 | 14 | 55 | 442 | 270 | 621 | 4.47e-22 | 100 |
| MS.gene64677.t1 | MTR_8g094410 | 25.424 | 295 | 158 | 8 | 135 | 423 | 2 | 240 | 1.14e-20 | 92.8 |
| MS.gene64677.t1 | MTR_8g094410 | 34.555 | 191 | 114 | 5 | 26 | 215 | 3 | 183 | 1.41e-19 | 89.4 |
| MS.gene64677.t1 | MTR_8g094410 | 25.521 | 192 | 127 | 3 | 256 | 442 | 27 | 207 | 1.68e-13 | 71.6 |
| MS.gene64677.t1 | MTR_8g094410 | 29.310 | 174 | 115 | 3 | 31 | 204 | 60 | 225 | 3.31e-11 | 64.7 |
| MS.gene64677.t1 | MTR_7g072410 | 26.540 | 422 | 222 | 16 | 24 | 424 | 233 | 587 | 2.10e-20 | 94.7 |
| MS.gene64677.t1 | MTR_3g086300 | 24.866 | 374 | 251 | 11 | 70 | 416 | 153 | 523 | 3.12e-20 | 93.6 |
| MS.gene64677.t1 | MTR_3g097060 | 26.761 | 426 | 238 | 13 | 32 | 437 | 41 | 412 | 4.81e-20 | 92.4 |
| MS.gene64677.t1 | MTR_3g097060 | 26.330 | 376 | 200 | 12 | 87 | 444 | 40 | 356 | 5.60e-19 | 89.0 |
| MS.gene64677.t1 | MTR_6g034795 | 26.368 | 402 | 204 | 16 | 55 | 428 | 267 | 604 | 1.43e-19 | 92.4 |
| MS.gene64677.t1 | MTR_4g029410 | 25.428 | 409 | 219 | 14 | 38 | 424 | 45 | 389 | 3.55e-19 | 90.9 |
| MS.gene64677.t1 | MTR_4g029410 | 25.373 | 335 | 209 | 12 | 136 | 443 | 35 | 355 | 1.23e-14 | 77.0 |
| MS.gene64677.t1 | MTR_7g086050 | 24.485 | 437 | 239 | 14 | 21 | 443 | 148 | 507 | 4.50e-19 | 90.9 |
| MS.gene64677.t1 | MTR_3g097060 | 26.330 | 376 | 200 | 12 | 87 | 444 | 40 | 356 | 4.67e-19 | 89.0 |
| MS.gene64677.t1 | MTR_3g097060 | 28.329 | 353 | 197 | 12 | 32 | 354 | 41 | 367 | 6.62e-17 | 82.4 |
| MS.gene64677.t1 | MTR_7g063440 | 25.980 | 408 | 239 | 11 | 61 | 441 | 14 | 385 | 4.04e-18 | 86.3 |
| MS.gene64677.t1 | MTR_7g063440 | 35.758 | 165 | 84 | 8 | 28 | 185 | 236 | 385 | 7.58e-15 | 76.3 |
| MS.gene64677.t1 | MTR_7g063440 | 25.980 | 408 | 239 | 11 | 61 | 441 | 106 | 477 | 4.93e-18 | 86.7 |
| MS.gene64677.t1 | MTR_7g063440 | 35.758 | 165 | 84 | 8 | 28 | 185 | 328 | 477 | 9.54e-15 | 76.6 |
| MS.gene64677.t1 | MTR_3g069030 | 25.467 | 428 | 233 | 15 | 49 | 441 | 83 | 459 | 1.20e-17 | 85.5 |
| MS.gene64677.t1 | MTR_3g069030 | 36.810 | 163 | 87 | 6 | 28 | 185 | 308 | 459 | 4.75e-13 | 71.2 |
| MS.gene64677.t1 | MTR_3g109650 | 24.444 | 405 | 203 | 14 | 65 | 417 | 75 | 428 | 1.23e-17 | 85.9 |
| MS.gene64677.t1 | MTR_7g451760 | 35.802 | 162 | 101 | 2 | 55 | 216 | 86 | 244 | 1.76e-17 | 82.8 |
| MS.gene64677.t1 | MTR_7g047560 | 35.802 | 162 | 101 | 2 | 55 | 216 | 86 | 244 | 1.76e-17 | 82.8 |
| MS.gene64677.t1 | MTR_7g016640 | 27.425 | 299 | 146 | 9 | 52 | 328 | 162 | 411 | 2.04e-17 | 84.7 |
| MS.gene64677.t1 | MTR_7g016640 | 27.049 | 366 | 208 | 18 | 66 | 390 | 65 | 412 | 3.46e-14 | 74.7 |
| MS.gene64677.t1 | MTR_7g016640 | 29.442 | 197 | 115 | 6 | 246 | 435 | 41 | 220 | 3.05e-11 | 65.5 |
| MS.gene64677.t1 | MTR_2g079610 | 27.302 | 315 | 171 | 7 | 135 | 442 | 128 | 391 | 3.47e-17 | 84.0 |
| MS.gene64677.t1 | MTR_8g094410 | 36.486 | 148 | 89 | 3 | 68 | 215 | 2 | 144 | 3.52e-17 | 81.6 |
| MS.gene64677.t1 | MTR_8g094410 | 25.490 | 255 | 129 | 7 | 175 | 423 | 2 | 201 | 1.47e-15 | 77.0 |
| MS.gene64677.t1 | MTR_8g094410 | 26.404 | 178 | 115 | 3 | 270 | 442 | 2 | 168 | 1.42e-11 | 65.1 |
| MS.gene64677.t1 | MTR_8g094410 | 29.310 | 174 | 115 | 3 | 31 | 204 | 21 | 186 | 2.63e-11 | 64.3 |
| MS.gene64677.t1 | MTR_5g038220 | 26.494 | 385 | 218 | 14 | 84 | 433 | 16 | 370 | 3.66e-17 | 83.2 |
| MS.gene64677.t1 | MTR_1g042800 | 26.331 | 357 | 219 | 12 | 123 | 443 | 204 | 552 | 1.56e-16 | 82.8 |
| MS.gene64677.t1 | MTR_1g042800 | 24.457 | 368 | 216 | 15 | 55 | 382 | 250 | 595 | 1.96e-14 | 76.3 |
| MS.gene64677.t1 | MTR_7g016640 | 27.174 | 276 | 133 | 8 | 52 | 308 | 162 | 388 | 2.09e-16 | 81.3 |
| MS.gene64677.t1 | MTR_7g016640 | 26.377 | 345 | 196 | 17 | 66 | 369 | 65 | 392 | 3.25e-12 | 68.2 |
| MS.gene64677.t1 | MTR_7g016640 | 29.798 | 198 | 113 | 7 | 246 | 435 | 41 | 220 | 2.88e-11 | 65.5 |
| MS.gene64677.t1 | MTR_5g089900 | 23.529 | 391 | 222 | 13 | 64 | 434 | 326 | 659 | 2.50e-16 | 82.0 |
| MS.gene64677.t1 | MTR_1g006695 | 23.404 | 376 | 209 | 9 | 60 | 402 | 9 | 338 | 4.08e-15 | 77.4 |
| MS.gene64677.t1 | MTR_3g064560 | 22.704 | 392 | 211 | 12 | 64 | 428 | 305 | 631 | 1.18e-14 | 77.0 |
| MS.gene64677.t1 | MTR_3g064560 | 24.014 | 279 | 172 | 6 | 158 | 407 | 292 | 559 | 9.06e-14 | 74.3 |
| MS.gene64677.t1 | MTR_0095s0070 | 25.413 | 303 | 155 | 10 | 141 | 432 | 33 | 275 | 5.33e-14 | 72.4 |
| MS.gene64677.t1 | MTR_0095s0070 | 25.430 | 291 | 159 | 10 | 26 | 312 | 28 | 264 | 2.15e-13 | 70.9 |
| MS.gene64677.t1 | MTR_0095s0070 | 28.846 | 156 | 105 | 4 | 292 | 442 | 28 | 182 | 1.17e-12 | 68.6 |
| MS.gene64677.t1 | MTR_0095s0070 | 26.943 | 193 | 122 | 5 | 256 | 441 | 52 | 232 | 4.83e-12 | 66.6 |
| MS.gene64677.t1 | MTR_3g113250 | 24.735 | 283 | 158 | 5 | 159 | 429 | 45 | 284 | 5.37e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64677.t1 | AT5G48330 | 60.000 | 435 | 153 | 7 | 19 | 443 | 31 | 454 | 3.49e-177 | 503 |
| MS.gene64677.t1 | AT5G48330 | 59.908 | 434 | 154 | 7 | 19 | 443 | 31 | 453 | 4.72e-177 | 503 |
| MS.gene64677.t1 | AT3G02510 | 28.375 | 363 | 209 | 9 | 86 | 420 | 9 | 348 | 6.65e-28 | 114 |
| MS.gene64677.t1 | AT3G02510 | 34.507 | 142 | 90 | 2 | 63 | 203 | 196 | 335 | 2.76e-17 | 84.0 |
| MS.gene64677.t1 | AT3G02510 | 25.680 | 331 | 169 | 10 | 30 | 335 | 114 | 392 | 7.88e-17 | 82.4 |
| MS.gene64677.t1 | AT5G63860 | 26.667 | 405 | 225 | 14 | 28 | 423 | 36 | 377 | 1.45e-27 | 114 |
| MS.gene64677.t1 | AT5G63860 | 27.362 | 307 | 199 | 8 | 28 | 321 | 89 | 384 | 6.48e-22 | 98.2 |
| MS.gene64677.t1 | AT5G63860 | 22.423 | 388 | 245 | 8 | 58 | 442 | 10 | 344 | 4.11e-21 | 95.5 |
| MS.gene64677.t1 | AT5G63860 | 25.843 | 356 | 194 | 11 | 95 | 443 | 1 | 293 | 2.23e-18 | 87.4 |
| MS.gene64677.t1 | AT5G16040 | 27.317 | 410 | 217 | 10 | 26 | 420 | 5 | 348 | 5.82e-27 | 112 |
| MS.gene64677.t1 | AT5G16040 | 26.384 | 307 | 177 | 5 | 137 | 442 | 6 | 264 | 6.28e-18 | 85.9 |
| MS.gene64677.t1 | AT3G02510 | 27.635 | 351 | 179 | 8 | 84 | 420 | 1 | 290 | 2.03e-22 | 98.2 |
| MS.gene64677.t1 | AT3G02510 | 34.507 | 142 | 90 | 2 | 63 | 203 | 138 | 277 | 1.57e-17 | 84.0 |
| MS.gene64677.t1 | AT3G02510 | 26.621 | 293 | 141 | 9 | 65 | 335 | 94 | 334 | 3.57e-17 | 82.8 |
| MS.gene64677.t1 | AT3G02510 | 26.250 | 320 | 161 | 8 | 138 | 442 | 1 | 260 | 1.97e-16 | 80.5 |
| MS.gene64677.t1 | AT3G02510 | 27.729 | 339 | 170 | 8 | 86 | 411 | 9 | 285 | 7.89e-22 | 95.9 |
| MS.gene64677.t1 | AT3G02510 | 25.272 | 368 | 196 | 9 | 26 | 379 | 5 | 307 | 3.83e-16 | 79.3 |
| MS.gene64677.t1 | AT3G02510 | 25.237 | 317 | 166 | 9 | 137 | 441 | 6 | 263 | 9.52e-13 | 69.3 |
| MS.gene64677.t1 | AT5G12350 | 24.615 | 390 | 218 | 12 | 64 | 434 | 309 | 641 | 1.75e-20 | 95.1 |
| MS.gene64677.t1 | AT5G12350 | 24.810 | 395 | 207 | 17 | 29 | 401 | 330 | 656 | 7.05e-12 | 68.2 |
| MS.gene64677.t1 | AT1G76950 | 25.240 | 416 | 221 | 16 | 55 | 442 | 272 | 625 | 5.60e-20 | 93.6 |
| MS.gene64677.t1 | AT5G19420 | 24.041 | 391 | 219 | 12 | 64 | 434 | 313 | 645 | 5.64e-20 | 93.6 |
| MS.gene64677.t1 | AT5G19420 | 24.745 | 392 | 215 | 14 | 64 | 434 | 347 | 679 | 6.15e-20 | 93.6 |
| MS.gene64677.t1 | AT5G19420 | 24.745 | 392 | 215 | 14 | 64 | 434 | 313 | 645 | 6.19e-20 | 93.6 |
| MS.gene64677.t1 | AT3G55580 | 26.619 | 417 | 247 | 13 | 49 | 441 | 102 | 483 | 2.25e-19 | 90.9 |
| MS.gene64677.t1 | AT3G55580 | 31.746 | 189 | 108 | 7 | 6 | 185 | 307 | 483 | 9.68e-13 | 70.5 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.77e-19 | 90.1 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.77e-19 | 90.1 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.77e-19 | 90.1 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 3.69e-19 | 90.5 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 3.69e-19 | 90.5 |
| MS.gene64677.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 3.69e-19 | 90.5 |
| MS.gene64677.t1 | AT1G65920 | 24.557 | 395 | 207 | 12 | 64 | 433 | 247 | 575 | 4.24e-19 | 90.9 |
| MS.gene64677.t1 | AT1G65920 | 24.615 | 325 | 221 | 10 | 138 | 443 | 215 | 534 | 2.57e-12 | 69.7 |
| MS.gene64677.t1 | AT1G65920 | 24.173 | 393 | 211 | 11 | 64 | 433 | 293 | 621 | 4.53e-19 | 90.9 |
| MS.gene64677.t1 | AT1G65920 | 24.615 | 325 | 221 | 10 | 138 | 443 | 261 | 580 | 3.11e-12 | 69.3 |
| MS.gene64677.t1 | AT3G53830 | 26.540 | 422 | 243 | 15 | 46 | 441 | 87 | 467 | 1.56e-18 | 88.2 |
| MS.gene64677.t1 | AT3G53830 | 27.954 | 347 | 186 | 15 | 4 | 328 | 163 | 467 | 8.77e-11 | 64.3 |
| MS.gene64677.t1 | AT5G60870 | 24.945 | 457 | 252 | 16 | 44 | 443 | 20 | 442 | 2.40e-18 | 87.4 |
| MS.gene64677.t1 | AT5G60870 | 26.571 | 350 | 175 | 9 | 65 | 392 | 154 | 443 | 4.32e-17 | 83.6 |
| MS.gene64677.t1 | AT3G03790 | 26.420 | 405 | 212 | 13 | 17 | 405 | 141 | 475 | 2.72e-18 | 88.2 |
| MS.gene64677.t1 | AT3G53830 | 29.431 | 299 | 163 | 10 | 158 | 441 | 230 | 495 | 6.47e-18 | 86.3 |
| MS.gene64677.t1 | AT3G53830 | 29.181 | 281 | 153 | 12 | 65 | 328 | 244 | 495 | 8.33e-11 | 64.3 |
| MS.gene64677.t1 | AT5G16040 | 26.471 | 306 | 176 | 5 | 137 | 441 | 6 | 263 | 7.06e-18 | 85.1 |
| MS.gene64677.t1 | AT5G16040 | 25.538 | 372 | 194 | 11 | 26 | 381 | 5 | 309 | 1.06e-16 | 81.6 |
| MS.gene64677.t1 | AT1G27060 | 26.410 | 390 | 229 | 10 | 28 | 417 | 17 | 348 | 1.01e-17 | 85.1 |
| MS.gene64677.t1 | AT5G42140 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.09e-17 | 86.7 |
| MS.gene64677.t1 | AT5G42140 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.09e-17 | 86.7 |
| MS.gene64677.t1 | AT5G08710 | 26.222 | 450 | 252 | 16 | 19 | 442 | 36 | 431 | 1.21e-17 | 85.1 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT3G15430 | 24.818 | 411 | 245 | 8 | 43 | 444 | 38 | 393 | 2.44e-17 | 84.7 |
| MS.gene64677.t1 | AT5G60870 | 26.571 | 350 | 182 | 9 | 65 | 392 | 154 | 450 | 3.27e-17 | 84.0 |
| MS.gene64677.t1 | AT5G60870 | 30.178 | 169 | 108 | 4 | 55 | 216 | 254 | 419 | 2.65e-14 | 75.1 |
| MS.gene64677.t1 | AT3G03790 | 26.010 | 396 | 207 | 13 | 26 | 405 | 153 | 478 | 3.40e-17 | 85.1 |
| MS.gene64677.t1 | AT3G03790 | 26.010 | 396 | 207 | 13 | 26 | 405 | 153 | 478 | 3.41e-17 | 85.1 |
| MS.gene64677.t1 | AT3G23270 | 24.570 | 407 | 218 | 17 | 48 | 428 | 239 | 582 | 5.13e-17 | 84.3 |
| MS.gene64677.t1 | AT3G23270 | 26.178 | 382 | 215 | 14 | 80 | 443 | 213 | 545 | 6.71e-17 | 84.0 |
| MS.gene64677.t1 | AT4G14368 | 25.316 | 395 | 208 | 17 | 55 | 424 | 261 | 593 | 5.23e-17 | 84.3 |
| MS.gene64677.t1 | AT4G14368 | 25.392 | 319 | 187 | 10 | 132 | 443 | 285 | 559 | 8.76e-17 | 83.6 |
| MS.gene64677.t1 | AT3G23270 | 24.408 | 422 | 228 | 18 | 48 | 441 | 235 | 593 | 5.26e-17 | 84.3 |
| MS.gene64677.t1 | AT3G23270 | 26.178 | 382 | 215 | 14 | 80 | 443 | 209 | 541 | 6.93e-17 | 84.0 |
| MS.gene64677.t1 | AT5G60870 | 30.864 | 162 | 109 | 3 | 55 | 216 | 85 | 243 | 6.97e-17 | 80.9 |
| MS.gene64677.t1 | AT5G60870 | 33.571 | 140 | 84 | 3 | 53 | 185 | 134 | 271 | 2.11e-14 | 73.6 |
| MS.gene64677.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 278 | 551 | 9.17e-17 | 83.6 |
| MS.gene64677.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 254 | 585 | 1.36e-16 | 83.2 |
| MS.gene64677.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 283 | 556 | 1.01e-16 | 83.6 |
| MS.gene64677.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 259 | 590 | 1.37e-16 | 83.2 |
| MS.gene64677.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 285 | 558 | 1.08e-16 | 83.6 |
| MS.gene64677.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 261 | 592 | 1.51e-16 | 82.8 |
| MS.gene64677.t1 | AT3G02300 | 27.243 | 301 | 149 | 11 | 65 | 336 | 168 | 427 | 2.91e-16 | 81.3 |
| MS.gene64677.t1 | AT3G02300 | 24.242 | 363 | 222 | 11 | 66 | 390 | 64 | 411 | 1.22e-13 | 73.2 |
| MS.gene64677.t1 | AT3G02300 | 30.851 | 188 | 107 | 5 | 268 | 441 | 64 | 242 | 4.29e-12 | 68.2 |
| MS.gene64677.t1 | AT3G02300 | 27.243 | 301 | 149 | 11 | 65 | 336 | 179 | 438 | 2.91e-16 | 81.3 |
| MS.gene64677.t1 | AT3G02300 | 24.242 | 363 | 222 | 11 | 66 | 390 | 75 | 422 | 1.15e-13 | 73.2 |
| MS.gene64677.t1 | AT3G02300 | 35.172 | 145 | 80 | 4 | 268 | 407 | 75 | 210 | 4.33e-12 | 68.2 |
| MS.gene64677.t1 | AT5G11580 | 25.513 | 439 | 222 | 15 | 28 | 413 | 37 | 423 | 4.19e-16 | 80.9 |
| MS.gene64677.t1 | AT5G11580 | 26.448 | 397 | 204 | 14 | 61 | 416 | 14 | 363 | 2.63e-14 | 75.5 |
| MS.gene64677.t1 | AT5G60870 | 27.559 | 254 | 132 | 5 | 65 | 312 | 154 | 361 | 2.01e-15 | 78.2 |
| MS.gene64677.t1 | AT5G60870 | 31.818 | 132 | 87 | 3 | 55 | 186 | 254 | 382 | 6.26e-12 | 67.4 |
| MS.gene64677.t1 | AT1G19880 | 26.710 | 307 | 152 | 8 | 159 | 444 | 45 | 299 | 8.71e-15 | 77.0 |
| MS.gene64677.t1 | AT3G47660 | 28.374 | 289 | 177 | 12 | 46 | 312 | 253 | 533 | 1.90e-14 | 76.3 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 222 | 554 | 5.43e-14 | 74.7 |
| MS.gene64677.t1 | AT3G47660 | 28.374 | 289 | 177 | 12 | 46 | 312 | 186 | 466 | 1.91e-14 | 76.3 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 155 | 487 | 4.42e-14 | 75.1 |
| MS.gene64677.t1 | AT3G47660 | 27.742 | 310 | 190 | 13 | 46 | 329 | 367 | 668 | 3.00e-14 | 75.9 |
| MS.gene64677.t1 | AT3G47660 | 24.561 | 399 | 215 | 16 | 64 | 442 | 336 | 668 | 7.98e-14 | 74.3 |
| MS.gene64677.t1 | AT3G47660 | 27.742 | 310 | 190 | 13 | 46 | 329 | 328 | 629 | 3.91e-14 | 75.5 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 297 | 629 | 6.03e-14 | 74.7 |
| MS.gene64677.t1 | AT3G47660 | 27.742 | 310 | 190 | 13 | 46 | 329 | 328 | 629 | 3.91e-14 | 75.5 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 297 | 629 | 6.03e-14 | 74.7 |
| MS.gene64677.t1 | AT3G47660 | 27.742 | 310 | 190 | 13 | 46 | 329 | 331 | 632 | 4.09e-14 | 75.1 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 300 | 632 | 6.71e-14 | 74.7 |
| MS.gene64677.t1 | AT3G47660 | 27.742 | 310 | 190 | 13 | 46 | 329 | 331 | 632 | 4.20e-14 | 75.1 |
| MS.gene64677.t1 | AT3G47660 | 24.812 | 399 | 214 | 17 | 64 | 442 | 300 | 632 | 7.14e-14 | 74.3 |
| MS.gene64677.t1 | AT1G69710 | 26.246 | 301 | 190 | 9 | 136 | 407 | 247 | 544 | 2.77e-13 | 72.8 |
| MS.gene64677.t1 | AT1G69710 | 29.289 | 239 | 144 | 9 | 65 | 281 | 396 | 631 | 3.57e-11 | 65.9 |
| MS.gene64677.t1 | AT1G69710 | 26.246 | 301 | 190 | 9 | 136 | 407 | 260 | 557 | 2.83e-13 | 72.8 |
| MS.gene64677.t1 | AT1G69710 | 29.661 | 236 | 141 | 9 | 68 | 281 | 412 | 644 | 3.95e-11 | 65.9 |
| MS.gene64677.t1 | AT5G08710 | 26.781 | 351 | 191 | 13 | 19 | 357 | 36 | 332 | 1.19e-12 | 69.3 |
| MS.gene64677.t1 | AT5G08710 | 25.959 | 339 | 173 | 13 | 87 | 407 | 54 | 332 | 1.25e-12 | 69.3 |
Find 159 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGGGTCTGTTTGGGTTT+GGG | 0.143939 | 5.2:-11906586 | MS.gene64677:CDS |
| CTGAAGCTGTTCTGCCTTCT+AGG | 0.180347 | 5.2:-11906521 | MS.gene64677:CDS |
| TCTAACCCCTCCACTCTTCT+TGG | 0.209669 | 5.2:+11906666 | None:intergenic |
| CAAAATTTGAAAACCTTCTA+AGG | 0.230502 | 5.2:+11904636 | None:intergenic |
| CCACTTCACAAGGCGATCTT+TGG | 0.235793 | 5.2:-11906755 | MS.gene64677:CDS |
| AGATGGAAGGATAGGGAATA+TGG | 0.260984 | 5.2:-11905559 | MS.gene64677:CDS |
| ATGATGGGTCTGTTTGGGTT+TGG | 0.261109 | 5.2:-11906587 | MS.gene64677:CDS |
| AGACTAACATGCCAATAATA+TGG | 0.268553 | 5.2:-11905413 | MS.gene64677:CDS |
| GCCTTGATTGATGCGTTGGC+TGG | 0.288036 | 5.2:-11904805 | MS.gene64677:CDS |
| CACAAGGCGATCTTTGGGCT+TGG | 0.291957 | 5.2:-11906749 | MS.gene64677:CDS |
| GGGGCGAGCTAGAGAAGATT+TGG | 0.300080 | 5.2:-11905010 | MS.gene64677:CDS |
| AAGTCCAAGTTGTCCCCTTT+TGG | 0.301219 | 5.2:+11906557 | None:intergenic |
| CTGTGGATGGCAAGCTGTTT+GGG | 0.306555 | 5.2:-11905596 | MS.gene64677:CDS |
| ACAAGGCGATCTTTGGGCTT+GGG | 0.310684 | 5.2:-11906748 | MS.gene64677:CDS |
| AGGCGAGGTTCCCATATTAT+TGG | 0.321168 | 5.2:+11905402 | None:intergenic |
| CATAATCTGGTTCTTGTTGC+TGG | 0.330642 | 5.2:-11904592 | MS.gene64677:CDS |
| GATGGTGCCCTCTTGAGTTC+TGG | 0.335543 | 5.2:-11905054 | MS.gene64677:CDS |
| GAAACAGGTCTCGTTTGGTT+GGG | 0.339280 | 5.2:-11905637 | MS.gene64677:intron |
| CCAACAACCACCGTTGGTAT+AGG | 0.342749 | 5.2:-11906864 | MS.gene64677:CDS |
| AGCGGGGCTTGGCCACTCTT+TGG | 0.346640 | 5.2:-11904944 | MS.gene64677:CDS |
| CACTTCACAAGGCGATCTTT+GGG | 0.348125 | 5.2:-11906754 | MS.gene64677:CDS |
| TTGGTGATGATGGGTCTGTT+TGG | 0.349821 | 5.2:-11906593 | MS.gene64677:CDS |
| GTCTGGGTTTGATCATAATC+TGG | 0.355645 | 5.2:-11904605 | MS.gene64677:CDS |
| TCGTGTTGTGTTGGTGATGA+TGG | 0.355668 | 5.2:-11906603 | MS.gene64677:CDS |
| TGGTGATGATGGGTCTGTTT+GGG | 0.357075 | 5.2:-11906592 | MS.gene64677:CDS |
| TCAGATAGTAATGTCACTTT+GGG | 0.357204 | 5.2:-11904901 | MS.gene64677:CDS |
| AGCCCCGCTGCTACGGAAAC+AGG | 0.364716 | 5.2:+11904958 | None:intergenic |
| TTCAGCAGGGCGTGCACATT+CGG | 0.368046 | 5.2:-11904764 | MS.gene64677:CDS |
| GAAATGTGGGTCTGGGGATC+TGG | 0.369104 | 5.2:-11904721 | MS.gene64677:CDS |
| GATGGGTCTGTTTGGGTTTG+GGG | 0.371073 | 5.2:-11906585 | MS.gene64677:CDS |
| TCAGAAGGTAAAGAAGGAAT+TGG | 0.376055 | 5.2:+11906819 | None:intergenic |
| GGATGGCAAGCTGTTTGGGT+GGG | 0.376413 | 5.2:-11905592 | MS.gene64677:CDS |
| TAGAAACAACGAAGCCCAAC+TGG | 0.377481 | 5.2:-11906724 | MS.gene64677:CDS |
| ACTCCTGTTTCCGTAGCAGC+GGG | 0.387778 | 5.2:-11904961 | MS.gene64677:CDS |
| GCACTTGAACTGGAATCTAA+TGG | 0.394490 | 5.2:+11905513 | None:intergenic |
| GTTTCCGTAGCAGCGGGGCT+TGG | 0.395218 | 5.2:-11904955 | MS.gene64677:CDS |
| AGTAACGTGTATGGCCAATT+GGG | 0.400946 | 5.2:-11905030 | MS.gene64677:CDS |
| CAAAAGGAGAAATGTGGGTC+TGG | 0.402480 | 5.2:-11904729 | MS.gene64677:CDS |
| TGATTGAAACAGGTCTCGTT+TGG | 0.413513 | 5.2:-11905642 | MS.gene64677:intron |
| ACTGTGGATGGCAAGCTGTT+TGG | 0.414500 | 5.2:-11905597 | MS.gene64677:CDS |
| CGCCCTGCTGAAACTGAAAC+CGG | 0.414741 | 5.2:+11904775 | None:intergenic |
| TCCTGCCTTGATTGATGCGT+TGG | 0.421410 | 5.2:-11904809 | MS.gene64677:CDS |
| AATAATATGGGAACCTCGCC+TGG | 0.424364 | 5.2:-11905400 | MS.gene64677:CDS |
| GTTTGAAAATGCACTTGAAC+TGG | 0.426915 | 5.2:+11905503 | None:intergenic |
| TGCGTTGGCTGGGGAAAATC+CGG | 0.427799 | 5.2:-11904794 | MS.gene64677:CDS |
| CTTCTCTAGCTCGCCCCAAT+TGG | 0.427816 | 5.2:+11905016 | None:intergenic |
| AAGTAACGTGTATGGCCAAT+TGG | 0.428223 | 5.2:-11905031 | MS.gene64677:CDS |
| GGGCGAGCTAGAGAAGATTT+GGG | 0.429340 | 5.2:-11905009 | MS.gene64677:CDS |
| ATCAGATAGTAATGTCACTT+TGG | 0.429388 | 5.2:-11904902 | MS.gene64677:CDS |
| CCTTGATTGATGCGTTGGCT+GGG | 0.431283 | 5.2:-11904804 | MS.gene64677:CDS |
| GGAGTGAACTTTATGTCAAC+AGG | 0.436438 | 5.2:+11904979 | None:intergenic |
| GAAAGTGCTTCAACCCTAGA+AGG | 0.437657 | 5.2:+11906507 | None:intergenic |
| ATGAGCACGGTGATGAGTTT+CGG | 0.438778 | 5.2:-11906915 | MS.gene64677:CDS |
| GATGGCAAGCTGTTTGGGTG+GGG | 0.439388 | 5.2:-11905591 | MS.gene64677:CDS |
| AGTTCTCAGCTAGGACGGGC+AGG | 0.440448 | 5.2:-11904844 | MS.gene64677:CDS |
| CGTGTTGTGTTGGTGATGAT+GGG | 0.440936 | 5.2:-11906602 | MS.gene64677:CDS |
| GACTACAGATATTGCTTCAT+GGG | 0.446195 | 5.2:-11904878 | MS.gene64677:CDS |
| TGAAGCTGTTCTGCCTTCTA+GGG | 0.448975 | 5.2:-11906520 | MS.gene64677:CDS |
| AAACAGGTCTCGTTTGGTTG+GGG | 0.450780 | 5.2:-11905636 | MS.gene64677:intron |
| TGAAACAGGTCTCGTTTGGT+TGG | 0.450912 | 5.2:-11905638 | MS.gene64677:intron |
| TGGATGGCAAGCTGTTTGGG+TGG | 0.459079 | 5.2:-11905593 | MS.gene64677:CDS |
| CAAGGCGATCTTTGGGCTTG+GGG | 0.460820 | 5.2:-11906747 | MS.gene64677:CDS |
| ATCAATCAAGGCAGGAAGAT+AGG | 0.464337 | 5.2:+11904816 | None:intergenic |
| CCTATACCAACGGTGGTTGT+TGG | 0.466016 | 5.2:+11906864 | None:intergenic |
| AATCCGGTTTCAGTTTCAGC+AGG | 0.467662 | 5.2:-11904778 | MS.gene64677:CDS |
| GGAAAGCCCACGACCCAGTT+GGG | 0.471539 | 5.2:+11906710 | None:intergenic |
| TTAGAAAATGTGAAGGTTTG+TGG | 0.475248 | 5.2:-11906648 | MS.gene64677:CDS |
| AAAAGGAGAAATGTGGGTCT+GGG | 0.480674 | 5.2:-11904728 | MS.gene64677:CDS |
| AACGAAGCCCAACTGGGTCG+TGG | 0.486773 | 5.2:-11906717 | MS.gene64677:CDS |
| TCGGTTGCTCTCACATCAAA+AGG | 0.487958 | 5.2:-11904745 | MS.gene64677:CDS |
| ATGGGTCTGTTTGGGTTTGG+GGG | 0.497631 | 5.2:-11906584 | MS.gene64677:CDS |
| GAAAACCTTCTAAGGAATCC+AGG | 0.497690 | 5.2:+11904644 | None:intergenic |
| GGACTACAGATATTGCTTCA+TGG | 0.498556 | 5.2:-11904879 | MS.gene64677:CDS |
| GACTAACATGCCAATAATAT+GGG | 0.499069 | 5.2:-11905412 | MS.gene64677:CDS |
| CCCAGCCAACGCATCAATCA+AGG | 0.500231 | 5.2:+11904804 | None:intergenic |
| TATTATGCAGATGGAAGGAT+AGG | 0.501045 | 5.2:-11905567 | MS.gene64677:CDS |
| GGCGATCACAGAGAATATTC+CGG | 0.501138 | 5.2:-11906983 | MS.gene64677:CDS |
| GTGGCCAAGCCCCGCTGCTA+CGG | 0.501725 | 5.2:+11904951 | None:intergenic |
| TCTAAGGAATCCAGGTAAAA+CGG | 0.504606 | 5.2:+11904652 | None:intergenic |
| ATCAAGGCAGGAAGATAGGC+AGG | 0.508105 | 5.2:+11904820 | None:intergenic |
| GGTAAAGAAGGAATTGGAGT+TGG | 0.508424 | 5.2:+11906825 | None:intergenic |
| TTCTCCAGAAAACGTAGTTA+AGG | 0.508526 | 5.2:-11906487 | MS.gene64677:intron |
| CTTGATTGATGCGTTGGCTG+GGG | 0.510648 | 5.2:-11904803 | MS.gene64677:CDS |
| GATGGAAGGATAGGGAATAT+GGG | 0.512559 | 5.2:-11905558 | MS.gene64677:CDS |
| CGGAAAGCCCACGACCCAGT+TGG | 0.514415 | 5.2:+11906709 | None:intergenic |
| ACAATATCAGAAGGTAAAGA+AGG | 0.516505 | 5.2:+11906813 | None:intergenic |
| TCACCGTGCTCATCCATCTC+CGG | 0.521429 | 5.2:+11906925 | None:intergenic |
| CGGTTGTTATCCACCGGAGA+TGG | 0.522709 | 5.2:-11906938 | MS.gene64677:CDS |
| AAAGAAAGTCTTACAAGGAA+TGG | 0.524779 | 5.2:-11905442 | MS.gene64677:CDS |
| ATGTCCAAAAGGGGACAACT+TGG | 0.525312 | 5.2:-11906561 | MS.gene64677:CDS |
| CTCATTCCATGTTTCTCTAG+CGG | 0.530612 | 5.2:+11906689 | None:intergenic |
| AAAGAACTAAAGAGTGATCA+AGG | 0.530943 | 5.2:+11905334 | None:intergenic |
| TACTATCTGATTCATCAAGC+TGG | 0.532238 | 5.2:+11904914 | None:intergenic |
| GGTGTTGTTTCGTGTTGTGT+TGG | 0.534055 | 5.2:-11906612 | MS.gene64677:CDS |
| CACTCCTGTTTCCGTAGCAG+CGG | 0.534340 | 5.2:-11904962 | MS.gene64677:CDS |
| AACGGAACCCACGGAGCACT+CGG | 0.537020 | 5.2:-11906891 | MS.gene64677:CDS |
| CCAAAGATCGCCTTGTGAAG+TGG | 0.541795 | 5.2:+11906755 | None:intergenic |
| AGTTCTGGAAGTAACGTGTA+TGG | 0.542194 | 5.2:-11905039 | MS.gene64677:CDS |
| AAAAGGGGACAACTTGGACT+TGG | 0.548121 | 5.2:-11906555 | MS.gene64677:CDS |
| ACTGCGTGGCGTTCAAGTTG+TGG | 0.548356 | 5.2:-11905370 | MS.gene64677:CDS |
| GGGTGGGGCTATTATGCAGA+TGG | 0.551116 | 5.2:-11905576 | MS.gene64677:CDS |
| CACATCAAAAGGAGAAATGT+GGG | 0.554457 | 5.2:-11904734 | MS.gene64677:CDS |
| CCCGTCCTAGCTGAGAACTC+TGG | 0.559607 | 5.2:+11904848 | None:intergenic |
| TGCGAGAGAGTGGTAGTGAC+CGG | 0.560541 | 5.2:+11906779 | None:intergenic |
| TGGTAAACCGAGTGCTCCGT+GGG | 0.572538 | 5.2:+11906884 | None:intergenic |
| GCTCTTGCATTAACTGTGGA+TGG | 0.574863 | 5.2:-11905609 | MS.gene64677:CDS |
| GTTCTCAGCTAGGACGGGCA+GGG | 0.575236 | 5.2:-11904843 | MS.gene64677:CDS |
| CGCAGTTCTTCAACCAGGCG+AGG | 0.575726 | 5.2:+11905387 | None:intergenic |
| ACCAGAGTTCTCAGCTAGGA+CGG | 0.577035 | 5.2:-11904849 | MS.gene64677:CDS |
| CCAGAGTTCTCAGCTAGGAC+GGG | 0.578114 | 5.2:-11904848 | MS.gene64677:CDS |
| ACGAAGCCCAACTGGGTCGT+GGG | 0.579776 | 5.2:-11906716 | MS.gene64677:CDS |
| TCACATCAAAAGGAGAAATG+TGG | 0.579944 | 5.2:-11904735 | MS.gene64677:CDS |
| GAATATGGGGAATGATCACT+TGG | 0.580284 | 5.2:-11905544 | MS.gene64677:CDS |
| TTGGTAAACCGAGTGCTCCG+TGG | 0.581895 | 5.2:+11906883 | None:intergenic |
| GCCAACGCATCAATCAAGGC+AGG | 0.582821 | 5.2:+11904808 | None:intergenic |
| CCGCCGCGGTTGTTATCCAC+CGG | 0.586164 | 5.2:-11906944 | MS.gene64677:CDS |
| AGTCTTACAAGGAATGGCAG+AGG | 0.587231 | 5.2:-11905436 | MS.gene64677:CDS |
| GGTTTACCAACAACCACCGT+TGG | 0.588291 | 5.2:-11906870 | MS.gene64677:CDS |
| CGCCACGCAGTTCTTCAACC+AGG | 0.592349 | 5.2:+11905382 | None:intergenic |
| AACAGGTCTCGTTTGGTTGG+GGG | 0.594975 | 5.2:-11905635 | MS.gene64677:intron |
| GTGGTAGTGACCGGCGTGGA+CGG | 0.596464 | 5.2:+11906788 | None:intergenic |
| CGTTACTTCCAGAACTCAAG+AGG | 0.596715 | 5.2:+11905046 | None:intergenic |
| ATGGAAGGATAGGGAATATG+GGG | 0.598459 | 5.2:-11905557 | MS.gene64677:CDS |
| AGTTTCGGCAACGGAACCCA+CGG | 0.610037 | 5.2:-11906900 | MS.gene64677:CDS |
| AAAGGAGAAATGTGGGTCTG+GGG | 0.610343 | 5.2:-11904727 | MS.gene64677:CDS |
| GAATGAGCCAAGAAGAGTGG+AGG | 0.612574 | 5.2:-11906673 | MS.gene64677:CDS |
| ATGGAATGAGCCAAGAAGAG+TGG | 0.613681 | 5.2:-11906676 | MS.gene64677:CDS |
| GGCTTTCCGCTAGAGAAACA+TGG | 0.616376 | 5.2:-11906695 | MS.gene64677:CDS |
| GATATTGTTACCGTCCACGC+CGG | 0.620563 | 5.2:-11906798 | MS.gene64677:CDS |
| GTGAAGTGGTTGCGAGAGAG+TGG | 0.623822 | 5.2:+11906769 | None:intergenic |
| AATGAGCCAAGAAGAGTGGA+GGG | 0.624889 | 5.2:-11906672 | MS.gene64677:CDS |
| GCTGAAAAGAAAGTCTTACA+AGG | 0.625036 | 5.2:-11905447 | MS.gene64677:CDS |
| CCGTGCTCATCCATCTCCGG+TGG | 0.625588 | 5.2:+11906928 | None:intergenic |
| TGCGTGTGTTCCTATACCAA+CGG | 0.630934 | 5.2:+11906854 | None:intergenic |
| GTAACGTGTATGGCCAATTG+GGG | 0.635104 | 5.2:-11905029 | MS.gene64677:CDS |
| ATCCGGTTTCAGTTTCAGCA+GGG | 0.636572 | 5.2:-11904777 | MS.gene64677:CDS |
| ATTATGCAGATGGAAGGATA+GGG | 0.638426 | 5.2:-11905566 | MS.gene64677:CDS |
| GGAGGGGTTAGAAAATGTGA+AGG | 0.639727 | 5.2:-11906655 | MS.gene64677:CDS |
| GCTGGCATATTGCCAAAGAG+TGG | 0.644997 | 5.2:+11904932 | None:intergenic |
| ACGGTGATGAGTTTCGGCAA+CGG | 0.649401 | 5.2:-11906909 | MS.gene64677:CDS |
| GGGGCTATTATGCAGATGGA+AGG | 0.650368 | 5.2:-11905572 | MS.gene64677:CDS |
| GCACGCTCTTGCATTAACTG+TGG | 0.652360 | 5.2:-11905613 | MS.gene64677:CDS |
| TCTCTCGCAACCACTTCACA+AGG | 0.655415 | 5.2:-11906765 | MS.gene64677:CDS |
| ACTACAGATATTGCTTCATG+GGG | 0.658687 | 5.2:-11904877 | MS.gene64677:CDS |
| AGAAACAACGAAGCCCAACT+GGG | 0.659931 | 5.2:-11906723 | MS.gene64677:CDS |
| CAAGTTGTGGACATTGCATG+TGG | 0.663017 | 5.2:-11905357 | MS.gene64677:CDS |
| TGGAACCAGAGTTCTCAGCT+AGG | 0.674318 | 5.2:-11904853 | MS.gene64677:CDS |
| TGGACGGTAACAATATCAGA+AGG | 0.675890 | 5.2:+11906804 | None:intergenic |
| CTCCTGTTTCCGTAGCAGCG+GGG | 0.681037 | 5.2:-11904960 | MS.gene64677:CDS |
| CAGATAGTAATGTCACTTTG+GGG | 0.684131 | 5.2:-11904900 | MS.gene64677:CDS |
| CCACCGGAGATGGATGAGCA+CGG | 0.687533 | 5.2:-11906928 | MS.gene64677:CDS |
| GTTACTTCCAGAACTCAAGA+GGG | 0.707147 | 5.2:+11905047 | None:intergenic |
| ATGAGCCAAGAAGAGTGGAG+GGG | 0.735998 | 5.2:-11906671 | MS.gene64677:CDS |
| GAGAGTGGTAGTGACCGGCG+TGG | 0.738365 | 5.2:+11906784 | None:intergenic |
| CTACAGATATTGCTTCATGG+GGG | 0.740225 | 5.2:-11904876 | MS.gene64677:CDS |
| TCTCCGGTGGATAACAACCG+CGG | 0.747489 | 5.2:+11906941 | None:intergenic |
| CGCCTGGTTGAAGAACTGCG+TGG | 0.750941 | 5.2:-11905384 | MS.gene64677:CDS |
| CCGGTGGATAACAACCGCGG+CGG | 0.765384 | 5.2:+11906944 | None:intergenic |
| GTGTGTTCCTATACCAACGG+TGG | 0.765520 | 5.2:+11906857 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTACTTTTTATAAAATATTT+TGG | - | chr5.2:11905305-11905324 | MS.gene64677:intron | 10.0% |
| !!! | ATATGTAATAATTTGCTAAA+AGG | + | chr5.2:11906456-11906475 | None:intergenic | 15.0% |
| !!! | TCAATTTTCTCAAATTATTA+CGG | + | chr5.2:11905785-11905804 | None:intergenic | 15.0% |
| !!! | TTAGTTCTTTTTCTAAATTT+AGG | - | chr5.2:11905491-11905510 | MS.gene64677:CDS | 15.0% |
| !! | TTAGTTCAAGAGTAAATTAT+CGG | - | chr5.2:11905375-11905394 | MS.gene64677:CDS | 20.0% |
| !! | TTTGGTATATGAAATTGTAA+GGG | - | chr5.2:11905398-11905417 | MS.gene64677:CDS | 20.0% |
| !!! | AATGTAGATTATGTTACTTA+CGG | + | chr5.2:11906268-11906287 | None:intergenic | 20.0% |
| !!! | ATTGCATAAGTTATGTTTTT+AGG | - | chr5.2:11905164-11905183 | MS.gene64677:intron | 20.0% |
| ! | CAAAATTTGAAAACCTTCTA+AGG | + | chr5.2:11906942-11906961 | None:intergenic | 25.0% |
| ! | CCATCTTTAATACAAAGTAT+CGG | - | chr5.2:11905854-11905873 | MS.gene64677:intron | 25.0% |
| ! | GATATAGAGACTAAATTGAA+TGG | - | chr5.2:11905622-11905641 | MS.gene64677:CDS | 25.0% |
| ! | GTAAAAGAGCTTATTTGAAT+AGG | + | chr5.2:11905749-11905768 | None:intergenic | 25.0% |
| ! | GTTTGGTATATGAAATTGTA+AGG | - | chr5.2:11905397-11905416 | MS.gene64677:CDS | 25.0% |
| ! | TCAATGTTTACGTGATTTAT+TGG | - | chr5.2:11905568-11905587 | MS.gene64677:CDS | 25.0% |
| ! | TTAAATGTAATCTCATGTGT+CGG | - | chr5.2:11905810-11905829 | MS.gene64677:intron | 25.0% |
| ! | TTAGTCCCTTAAATTAAAGA+AGG | + | chr5.2:11905648-11905667 | None:intergenic | 25.0% |
| !! | AATGGCCTTCTTTAATTTAA+GGG | - | chr5.2:11905640-11905659 | MS.gene64677:intron | 25.0% |
| !! | ATTGTTTCTTTGATTGAAAC+AGG | - | chr5.2:11905923-11905942 | MS.gene64677:intron | 25.0% |
| !! | CTACATTGCATAATTTTTCA+GGG | - | chr5.2:11906281-11906300 | MS.gene64677:intron | 25.0% |
| !! | TCTACATTGCATAATTTTTC+AGG | - | chr5.2:11906280-11906299 | MS.gene64677:intron | 25.0% |
| !!! | AATTTAGTCTTTGAAATTGC+AGG | - | chr5.2:11906311-11906330 | MS.gene64677:intron | 25.0% |
| !!! | ATTTAGGATCACAATTTTGA+AGG | - | chr5.2:11905507-11905526 | MS.gene64677:CDS | 25.0% |
| AAAGAAAGTCTTACAAGGAA+TGG | - | chr5.2:11906133-11906152 | MS.gene64677:intron | 30.0% | |
| AAAGAACTAAAGAGTGATCA+AGG | + | chr5.2:11906244-11906263 | None:intergenic | 30.0% | |
| ACAATATCAGAAGGTAAAGA+AGG | + | chr5.2:11904765-11904784 | None:intergenic | 30.0% | |
| AGACTAACATGCCAATAATA+TGG | - | chr5.2:11906162-11906181 | MS.gene64677:intron | 30.0% | |
| ATAACTTATGCAATGCATGT+AGG | + | chr5.2:11905158-11905177 | None:intergenic | 30.0% | |
| CCGATACTTTGTATTAAAGA+TGG | + | chr5.2:11905857-11905876 | None:intergenic | 30.0% | |
| CTTAATTAAGCTCTCTTACA+TGG | - | chr5.2:11905119-11905138 | MS.gene64677:intron | 30.0% | |
| GACTAACATGCCAATAATAT+GGG | - | chr5.2:11906163-11906182 | MS.gene64677:intron | 30.0% | |
| TTAGAAAATGTGAAGGTTTG+TGG | - | chr5.2:11904927-11904946 | MS.gene64677:CDS | 30.0% | |
| TTCCAATTTCCTTATGTTCA+GGG | - | chr5.2:11906372-11906391 | MS.gene64677:intron | 30.0% | |
| TTTCCAATTTCCTTATGTTC+AGG | - | chr5.2:11906371-11906390 | MS.gene64677:intron | 30.0% | |
| ! | AGAAGGTTTTCAAATTTTGC+AGG | - | chr5.2:11906943-11906962 | MS.gene64677:CDS | 30.0% |
| ! | ATCAGATAGTAATGTCACTT+TGG | - | chr5.2:11906673-11906692 | MS.gene64677:CDS | 30.0% |
| ! | GAATGGCCTTCTTTAATTTA+AGG | - | chr5.2:11905639-11905658 | MS.gene64677:intron | 30.0% |
| ! | TCAAGAGTAAATTATCGGTT+TGG | - | chr5.2:11905380-11905399 | MS.gene64677:CDS | 30.0% |
| !! | TCAGATAGTAATGTCACTTT+GGG | - | chr5.2:11906674-11906693 | MS.gene64677:CDS | 30.0% |
| !!! | ACGTGATTTATTGGTTTTGA+TGG | - | chr5.2:11905577-11905596 | MS.gene64677:CDS | 30.0% |
| !!! | TTGCTATTTTGTGAATCCAA+AGG | - | chr5.2:11905673-11905692 | MS.gene64677:intron | 30.0% |
| ACTACAGATATTGCTTCATG+GGG | - | chr5.2:11906698-11906717 | MS.gene64677:CDS | 35.0% | |
| ATTATGCAGATGGAAGGATA+GGG | - | chr5.2:11906009-11906028 | MS.gene64677:intron | 35.0% | |
| CACATCAAAAGGAGAAATGT+GGG | - | chr5.2:11906841-11906860 | MS.gene64677:CDS | 35.0% | |
| CTGACAATGTTGATATTGCT+AGG | + | chr5.2:11905254-11905273 | None:intergenic | 35.0% | |
| GACTACAGATATTGCTTCAT+GGG | - | chr5.2:11906697-11906716 | MS.gene64677:CDS | 35.0% | |
| GCATAGCTTATTCAAACACA+TGG | - | chr5.2:11905881-11905900 | MS.gene64677:intron | 35.0% | |
| GCTGAAAAGAAAGTCTTACA+AGG | - | chr5.2:11906128-11906147 | MS.gene64677:intron | 35.0% | |
| GTTTGAAAATGCACTTGAAC+TGG | + | chr5.2:11906075-11906094 | None:intergenic | 35.0% | |
| TACTATCTGATTCATCAAGC+TGG | + | chr5.2:11906664-11906683 | None:intergenic | 35.0% | |
| TATTATGCAGATGGAAGGAT+AGG | - | chr5.2:11906008-11906027 | MS.gene64677:intron | 35.0% | |
| TCACATCAAAAGGAGAAATG+TGG | - | chr5.2:11906840-11906859 | MS.gene64677:CDS | 35.0% | |
| TCAGAAGGTAAAGAAGGAAT+TGG | + | chr5.2:11904759-11904778 | None:intergenic | 35.0% | |
| TCTAAGGAATCCAGGTAAAA+CGG | + | chr5.2:11906926-11906945 | None:intergenic | 35.0% | |
| TCTGGTAAAAATGGTAGACT+TGG | - | chr5.2:11906872-11906891 | MS.gene64677:CDS | 35.0% | |
| TTCTCCAGAAAACGTAGTTA+AGG | - | chr5.2:11905088-11905107 | MS.gene64677:intron | 35.0% | |
| ! | AGGTTTTCAAATTTTGCAGG+CGG | - | chr5.2:11906946-11906965 | MS.gene64677:CDS | 35.0% |
| ! | AGTACCTTAACTACGTTTTC+TGG | + | chr5.2:11905095-11905114 | None:intergenic | 35.0% |
| ! | TTTTACCTGGATTCCTTAGA+AGG | - | chr5.2:11906926-11906945 | MS.gene64677:CDS | 35.0% |
| !! | CAGATAGTAATGTCACTTTG+GGG | - | chr5.2:11906675-11906694 | MS.gene64677:CDS | 35.0% |
| AAAAGGAGAAATGTGGGTCT+GGG | - | chr5.2:11906847-11906866 | MS.gene64677:CDS | 40.0% | |
| AAGTAACGTGTATGGCCAAT+TGG | - | chr5.2:11906544-11906563 | MS.gene64677:CDS | 40.0% | |
| AGATGGAAGGATAGGGAATA+TGG | - | chr5.2:11906016-11906035 | MS.gene64677:intron | 40.0% | |
| AGTAACGTGTATGGCCAATT+GGG | - | chr5.2:11906545-11906564 | MS.gene64677:CDS | 40.0% | |
| ATCAATCAAGGCAGGAAGAT+AGG | + | chr5.2:11906762-11906781 | None:intergenic | 40.0% | |
| ATGGAAGGATAGGGAATATG+GGG | - | chr5.2:11906018-11906037 | MS.gene64677:intron | 40.0% | |
| CAACTTTGTCCCTGAACATA+AGG | + | chr5.2:11906384-11906403 | None:intergenic | 40.0% | |
| CAATGTTGATATTGCTAGGC+TGG | + | chr5.2:11905250-11905269 | None:intergenic | 40.0% | |
| CGTCGAGCAATTAAATCCTT+TGG | + | chr5.2:11905692-11905711 | None:intergenic | 40.0% | |
| CTACAGATATTGCTTCATGG+GGG | - | chr5.2:11906699-11906718 | MS.gene64677:CDS | 40.0% | |
| CTCATTCCATGTTTCTCTAG+CGG | + | chr5.2:11904889-11904908 | None:intergenic | 40.0% | |
| GAATATGGGGAATGATCACT+TGG | - | chr5.2:11906031-11906050 | MS.gene64677:intron | 40.0% | |
| GATGGAAGGATAGGGAATAT+GGG | - | chr5.2:11906017-11906036 | MS.gene64677:intron | 40.0% | |
| GCACTTGAACTGGAATCTAA+TGG | + | chr5.2:11906065-11906084 | None:intergenic | 40.0% | |
| GGACTACAGATATTGCTTCA+TGG | - | chr5.2:11906696-11906715 | MS.gene64677:CDS | 40.0% | |
| GGAGTGAACTTTATGTCAAC+AGG | + | chr5.2:11906599-11906618 | None:intergenic | 40.0% | |
| GGTAAAGAAGGAATTGGAGT+TGG | + | chr5.2:11904753-11904772 | None:intergenic | 40.0% | |
| GTCCCTGAACATAAGGAAAT+TGG | + | chr5.2:11906377-11906396 | None:intergenic | 40.0% | |
| GTCTGGGTTTGATCATAATC+TGG | - | chr5.2:11906970-11906989 | MS.gene64677:CDS | 40.0% | |
| GTTACTTCCAGAACTCAAGA+GGG | + | chr5.2:11906531-11906550 | None:intergenic | 40.0% | |
| TGATTGAAACAGGTCTCGTT+TGG | - | chr5.2:11905933-11905952 | MS.gene64677:intron | 40.0% | |
| TGGACGGTAACAATATCAGA+AGG | + | chr5.2:11904774-11904793 | None:intergenic | 40.0% | |
| ! | CTTTCTTTTCAGCAACTTCG+AGG | + | chr5.2:11906121-11906140 | None:intergenic | 40.0% |
| ! | GAAAACCTTCTAAGGAATCC+AGG | + | chr5.2:11906934-11906953 | None:intergenic | 40.0% |
| !! | AGTTCTGGAAGTAACGTGTA+TGG | - | chr5.2:11906536-11906555 | MS.gene64677:CDS | 40.0% |
| !! | CATAATCTGGTTCTTGTTGC+TGG | - | chr5.2:11906983-11907002 | MS.gene64677:CDS | 40.0% |
| !!! | CGGTTTTTGGTTTGAAGTTC+CGG | + | chr5.2:11904614-11904633 | None:intergenic | 40.0% |
| AAAAGGGGACAACTTGGACT+TGG | - | chr5.2:11905020-11905039 | MS.gene64677:CDS | 45.0% | |
| AAACAGGTCTCGTTTGGTTG+GGG | - | chr5.2:11905939-11905958 | MS.gene64677:intron | 45.0% | |
| AAAGGAGAAATGTGGGTCTG+GGG | - | chr5.2:11906848-11906867 | MS.gene64677:CDS | 45.0% | |
| AACTCTCGAGTACCCTTATC+AGG | - | chr5.2:11906497-11906516 | MS.gene64677:CDS | 45.0% | |
| AATAATATGGGAACCTCGCC+TGG | - | chr5.2:11906175-11906194 | MS.gene64677:intron | 45.0% | |
| AATCCGGTTTCAGTTTCAGC+AGG | - | chr5.2:11906797-11906816 | MS.gene64677:CDS | 45.0% | |
| AATGAGCCAAGAAGAGTGGA+GGG | - | chr5.2:11904903-11904922 | MS.gene64677:CDS | 45.0% | |
| AGAAACAACGAAGCCCAACT+GGG | - | chr5.2:11904852-11904871 | MS.gene64677:CDS | 45.0% | |
| AGGCGAGGTTCCCATATTAT+TGG | + | chr5.2:11906176-11906195 | None:intergenic | 45.0% | |
| AGTCTTACAAGGAATGGCAG+AGG | - | chr5.2:11906139-11906158 | MS.gene64677:intron | 45.0% | |
| ATCCGGTTTCAGTTTCAGCA+GGG | - | chr5.2:11906798-11906817 | MS.gene64677:CDS | 45.0% | |
| ATGAGCACGGTGATGAGTTT+CGG | - | chr5.2:11904660-11904679 | MS.gene64677:CDS | 45.0% | |
| ATGGAATGAGCCAAGAAGAG+TGG | - | chr5.2:11904899-11904918 | MS.gene64677:CDS | 45.0% | |
| ATGTCCAAAAGGGGACAACT+TGG | - | chr5.2:11905014-11905033 | MS.gene64677:CDS | 45.0% | |
| CAAAAGGAGAAATGTGGGTC+TGG | - | chr5.2:11906846-11906865 | MS.gene64677:CDS | 45.0% | |
| CAAGTTGTGGACATTGCATG+TGG | - | chr5.2:11906218-11906237 | MS.gene64677:intron | 45.0% | |
| CACTTCACAAGGCGATCTTT+GGG | - | chr5.2:11904821-11904840 | MS.gene64677:CDS | 45.0% | |
| CGTTACTTCCAGAACTCAAG+AGG | + | chr5.2:11906532-11906551 | None:intergenic | 45.0% | |
| CGTTGTTGTGTGTGAGTTTC+AGG | + | chr5.2:11905198-11905217 | None:intergenic | 45.0% | |
| GAAACAGGTCTCGTTTGGTT+GGG | - | chr5.2:11905938-11905957 | MS.gene64677:intron | 45.0% | |
| GAAACTCACACACAACAACG+AGG | - | chr5.2:11905198-11905217 | MS.gene64677:intron | 45.0% | |
| GCTCTTGCATTAACTGTGGA+TGG | - | chr5.2:11905966-11905985 | MS.gene64677:intron | 45.0% | |
| GGAGGGGTTAGAAAATGTGA+AGG | - | chr5.2:11904920-11904939 | MS.gene64677:CDS | 45.0% | |
| GGCGATCACAGAGAATATTC+CGG | - | chr5.2:11904592-11904611 | MS.gene64677:CDS | 45.0% | |
| GTAACGTGTATGGCCAATTG+GGG | - | chr5.2:11906546-11906565 | MS.gene64677:CDS | 45.0% | |
| GTCTGGGGATCTGGTAAAAA+TGG | - | chr5.2:11906863-11906882 | MS.gene64677:CDS | 45.0% | |
| TAGAAACAACGAAGCCCAAC+TGG | - | chr5.2:11904851-11904870 | MS.gene64677:CDS | 45.0% | |
| TCGGTTGCTCTCACATCAAA+AGG | - | chr5.2:11906830-11906849 | MS.gene64677:CDS | 45.0% | |
| TGAAACAGGTCTCGTTTGGT+TGG | - | chr5.2:11905937-11905956 | MS.gene64677:intron | 45.0% | |
| TGAAGCTGTTCTGCCTTCTA+GGG | - | chr5.2:11905055-11905074 | MS.gene64677:CDS | 45.0% | |
| TGCGTGTGTTCCTATACCAA+CGG | + | chr5.2:11904724-11904743 | None:intergenic | 45.0% | |
| ! | AAATTTTGCAGGCGGTGTCT+GGG | - | chr5.2:11906954-11906973 | MS.gene64677:CDS | 45.0% |
| ! | AACGAGGTCCATTTTGAACC+GGG | - | chr5.2:11905214-11905233 | MS.gene64677:intron | 45.0% |
| ! | AAGTCCAAGTTGTCCCCTTT+TGG | + | chr5.2:11905021-11905040 | None:intergenic | 45.0% |
| ! | CAACGAGGTCCATTTTGAAC+CGG | - | chr5.2:11905213-11905232 | MS.gene64677:intron | 45.0% |
| ! | GTTTGTGGTGCTTTTGCTTC+TGG | - | chr5.2:11904942-11904961 | MS.gene64677:CDS | 45.0% |
| ! | TGATGGGTCTGTTTGGGTTT+GGG | - | chr5.2:11904989-11905008 | MS.gene64677:CDS | 45.0% |
| !! | ATGATGGGTCTGTTTGGGTT+TGG | - | chr5.2:11904988-11905007 | MS.gene64677:CDS | 45.0% |
| !! | CGTGTTGTGTTGGTGATGAT+GGG | - | chr5.2:11904973-11904992 | MS.gene64677:CDS | 45.0% |
| !! | GAAAGTGCTTCAACCCTAGA+AGG | + | chr5.2:11905071-11905090 | None:intergenic | 45.0% |
| !! | GGTGTTGTTTCGTGTTGTGT+TGG | - | chr5.2:11904963-11904982 | MS.gene64677:CDS | 45.0% |
| !! | TCGTGTTGTGTTGGTGATGA+TGG | - | chr5.2:11904972-11904991 | MS.gene64677:CDS | 45.0% |
| !! | TGGTGATGATGGGTCTGTTT+GGG | - | chr5.2:11904983-11905002 | MS.gene64677:CDS | 45.0% |
| !! | TTGGTGATGATGGGTCTGTT+TGG | - | chr5.2:11904982-11905001 | MS.gene64677:CDS | 45.0% |
| !!! | TACTTTTTATAAAATATTTT+GGG | - | chr5.2:11905306-11905325 | MS.gene64677:intron | 5.0% |
| AACAGGTCTCGTTTGGTTGG+GGG | - | chr5.2:11905940-11905959 | MS.gene64677:intron | 50.0% | |
| ACAAGGCGATCTTTGGGCTT+GGG | - | chr5.2:11904827-11904846 | MS.gene64677:CDS | 50.0% | |
| ACCAGAGTTCTCAGCTAGGA+CGG | - | chr5.2:11906726-11906745 | MS.gene64677:CDS | 50.0% | |
| ACGGTGATGAGTTTCGGCAA+CGG | - | chr5.2:11904666-11904685 | MS.gene64677:CDS | 50.0% | |
| ACTGTGGATGGCAAGCTGTT+TGG | - | chr5.2:11905978-11905997 | MS.gene64677:intron | 50.0% | |
| ATCAAGGCAGGAAGATAGGC+AGG | + | chr5.2:11906758-11906777 | None:intergenic | 50.0% | |
| ATGAGCCAAGAAGAGTGGAG+GGG | - | chr5.2:11904904-11904923 | MS.gene64677:CDS | 50.0% | |
| CAGATATTGCTTCATGGGGG+TGG | - | chr5.2:11906702-11906721 | MS.gene64677:CDS | 50.0% | |
| CCAAAGATCGCCTTGTGAAG+TGG | + | chr5.2:11904823-11904842 | None:intergenic | 50.0% | |
| CCAACAACCACCGTTGGTAT+AGG | - | chr5.2:11904711-11904730 | MS.gene64677:CDS | 50.0% | |
| CCACTTCACAAGGCGATCTT+TGG | - | chr5.2:11904820-11904839 | MS.gene64677:CDS | 50.0% | |
| CCTATACCAACGGTGGTTGT+TGG | + | chr5.2:11904714-11904733 | None:intergenic | 50.0% | |
| CGAGTACCCTTATCAGGTGA+TGG | - | chr5.2:11906503-11906522 | MS.gene64677:CDS | 50.0% | |
| CTGAAGCTGTTCTGCCTTCT+AGG | - | chr5.2:11905054-11905073 | MS.gene64677:CDS | 50.0% | |
| CTGTGGATGGCAAGCTGTTT+GGG | - | chr5.2:11905979-11905998 | MS.gene64677:intron | 50.0% | |
| CTTCAAACCAAAAACCGCCG+CGG | - | chr5.2:11904617-11904636 | MS.gene64677:CDS | 50.0% | |
| GAATGAGCCAAGAAGAGTGG+AGG | - | chr5.2:11904902-11904921 | MS.gene64677:CDS | 50.0% | |
| GATATTGTTACCGTCCACGC+CGG | - | chr5.2:11904777-11904796 | MS.gene64677:CDS | 50.0% | |
| GCACGCTCTTGCATTAACTG+TGG | - | chr5.2:11905962-11905981 | MS.gene64677:intron | 50.0% | |
| GCTGGCATATTGCCAAAGAG+TGG | + | chr5.2:11906646-11906665 | None:intergenic | 50.0% | |
| GGCTTTCCGCTAGAGAAACA+TGG | - | chr5.2:11904880-11904899 | MS.gene64677:CDS | 50.0% | |
| GGGCGAGCTAGAGAAGATTT+GGG | - | chr5.2:11906566-11906585 | MS.gene64677:CDS | 50.0% | |
| GGGGCTATTATGCAGATGGA+AGG | - | chr5.2:11906003-11906022 | MS.gene64677:intron | 50.0% | |
| GGTTTACCAACAACCACCGT+TGG | - | chr5.2:11904705-11904724 | MS.gene64677:CDS | 50.0% | |
| GGTTTGGGGGATGTCCAAAA+GGG | - | chr5.2:11905004-11905023 | MS.gene64677:CDS | 50.0% | |
| GTGTGTTCCTATACCAACGG+TGG | + | chr5.2:11904721-11904740 | None:intergenic | 50.0% | |
| GTTTGGGGGATGTCCAAAAG+GGG | - | chr5.2:11905005-11905024 | MS.gene64677:CDS | 50.0% | |
| TCCTGCCTTGATTGATGCGT+TGG | - | chr5.2:11906766-11906785 | MS.gene64677:CDS | 50.0% | |
| TCTAACCCCTCCACTCTTCT+TGG | + | chr5.2:11904912-11904931 | None:intergenic | 50.0% | |
| TCTCTCGCAACCACTTCACA+AGG | - | chr5.2:11904810-11904829 | MS.gene64677:CDS | 50.0% | |
| TGGAACCAGAGTTCTCAGCT+AGG | - | chr5.2:11906722-11906741 | MS.gene64677:CDS | 50.0% | |
| ! | ACGAGGTCCATTTTGAACCG+GGG | - | chr5.2:11905215-11905234 | MS.gene64677:intron | 50.0% |
| ! | AGGGCACCATCACCTGATAA+GGG | + | chr5.2:11906512-11906531 | None:intergenic | 50.0% |
| ! | ATAACAACCGCGGCGGTTTT+TGG | + | chr5.2:11904627-11904646 | None:intergenic | 50.0% |
| ! | ATGGGTCTGTTTGGGTTTGG+GGG | - | chr5.2:11904991-11905010 | MS.gene64677:CDS | 50.0% |
| ! | CAAATTTTGCAGGCGGTGTC+TGG | - | chr5.2:11906953-11906972 | MS.gene64677:CDS | 50.0% |
| ! | GATGGGTCTGTTTGGGTTTG+GGG | - | chr5.2:11904990-11905009 | MS.gene64677:CDS | 50.0% |
| ! | TCCATTTTGAACCGGGGACA+GGG | - | chr5.2:11905221-11905240 | MS.gene64677:intron | 50.0% |
| !! | CCTTGATTGATGCGTTGGCT+GGG | - | chr5.2:11906771-11906790 | MS.gene64677:CDS | 50.0% |
| !! | CGAAGATGAGCCGTTTTACC+TGG | - | chr5.2:11906913-11906932 | MS.gene64677:CDS | 50.0% |
| !! | CTTGATTGATGCGTTGGCTG+GGG | - | chr5.2:11906772-11906791 | MS.gene64677:CDS | 50.0% |
| ACCCTGTCCCCGGTTCAAAA+TGG | + | chr5.2:11905225-11905244 | None:intergenic | 55.0% | |
| ACTCCTGTTTCCGTAGCAGC+GGG | - | chr5.2:11906614-11906633 | MS.gene64677:CDS | 55.0% | |
| AGTTTCGGCAACGGAACCCA+CGG | - | chr5.2:11904675-11904694 | MS.gene64677:CDS | 55.0% | |
| CAAGGCGATCTTTGGGCTTG+GGG | - | chr5.2:11904828-11904847 | MS.gene64677:CDS | 55.0% | |
| CACAAGGCGATCTTTGGGCT+TGG | - | chr5.2:11904826-11904845 | MS.gene64677:CDS | 55.0% | |
| CACTCCTGTTTCCGTAGCAG+CGG | - | chr5.2:11906613-11906632 | MS.gene64677:CDS | 55.0% | |
| CCAGAGTTCTCAGCTAGGAC+GGG | - | chr5.2:11906727-11906746 | MS.gene64677:CDS | 55.0% | |
| CCCAGCCAACGCATCAATCA+AGG | + | chr5.2:11906774-11906793 | None:intergenic | 55.0% | |
| CGCCCTGCTGAAACTGAAAC+CGG | + | chr5.2:11906803-11906822 | None:intergenic | 55.0% | |
| CGGTTGTTATCCACCGGAGA+TGG | - | chr5.2:11904637-11904656 | MS.gene64677:CDS | 55.0% | |
| GAAATGTGGGTCTGGGGATC+TGG | - | chr5.2:11906854-11906873 | MS.gene64677:CDS | 55.0% | |
| GATGGCAAGCTGTTTGGGTG+GGG | - | chr5.2:11905984-11906003 | MS.gene64677:intron | 55.0% | |
| GATGGTGCCCTCTTGAGTTC+TGG | - | chr5.2:11906521-11906540 | MS.gene64677:CDS | 55.0% | |
| GCCAACGCATCAATCAAGGC+AGG | + | chr5.2:11906770-11906789 | None:intergenic | 55.0% | |
| GGATGGCAAGCTGTTTGGGT+GGG | - | chr5.2:11905983-11906002 | MS.gene64677:intron | 55.0% | |
| GGGGCGAGCTAGAGAAGATT+TGG | - | chr5.2:11906565-11906584 | MS.gene64677:CDS | 55.0% | |
| GGGTGGGGCTATTATGCAGA+TGG | - | chr5.2:11905999-11906018 | MS.gene64677:intron | 55.0% | |
| GGGTTTGGGGGATGTCCAAA+AGG | - | chr5.2:11905003-11905022 | MS.gene64677:CDS | 55.0% | |
| GTGAAGTGGTTGCGAGAGAG+TGG | + | chr5.2:11904809-11904828 | None:intergenic | 55.0% | |
| TCACCGTGCTCATCCATCTC+CGG | + | chr5.2:11904653-11904672 | None:intergenic | 55.0% | |
| TCTCCGGTGGATAACAACCG+CGG | + | chr5.2:11904637-11904656 | None:intergenic | 55.0% | |
| TGGATGGCAAGCTGTTTGGG+TGG | - | chr5.2:11905982-11906001 | MS.gene64677:intron | 55.0% | |
| TGGTAAACCGAGTGCTCCGT+GGG | + | chr5.2:11904694-11904713 | None:intergenic | 55.0% | |
| TTCAGCAGGGCGTGCACATT+CGG | - | chr5.2:11906811-11906830 | MS.gene64677:CDS | 55.0% | |
| TTGGTAAACCGAGTGCTCCG+TGG | + | chr5.2:11904695-11904714 | None:intergenic | 55.0% | |
| ! | CTTCTCTAGCTCGCCCCAAT+TGG | + | chr5.2:11906562-11906581 | None:intergenic | 55.0% |
| ! | GCCTTGATTGATGCGTTGGC+TGG | - | chr5.2:11906770-11906789 | MS.gene64677:CDS | 55.0% |
| ! | GTCCATTTTGAACCGGGGAC+AGG | - | chr5.2:11905220-11905239 | MS.gene64677:intron | 55.0% |
| ! | TGCGAGAGAGTGGTAGTGAC+CGG | + | chr5.2:11904799-11904818 | None:intergenic | 55.0% |
| !! | ACTGCGTGGCGTTCAAGTTG+TGG | - | chr5.2:11906205-11906224 | MS.gene64677:intron | 55.0% |
| !! | GAGGGCACCATCACCTGATA+AGG | + | chr5.2:11906513-11906532 | None:intergenic | 55.0% |
| !! | TGCGTTGGCTGGGGAAAATC+CGG | - | chr5.2:11906781-11906800 | MS.gene64677:CDS | 55.0% |
| AACGAAGCCCAACTGGGTCG+TGG | - | chr5.2:11904858-11904877 | MS.gene64677:CDS | 60.0% | |
| ACGAAGCCCAACTGGGTCGT+GGG | - | chr5.2:11904859-11904878 | MS.gene64677:CDS | 60.0% | |
| AGTTCTCAGCTAGGACGGGC+AGG | - | chr5.2:11906731-11906750 | MS.gene64677:CDS | 60.0% | |
| CCACCGGAGATGGATGAGCA+CGG | - | chr5.2:11904647-11904666 | MS.gene64677:CDS | 60.0% | |
| CCCGTCCTAGCTGAGAACTC+TGG | + | chr5.2:11906730-11906749 | None:intergenic | 60.0% | |
| CGCAGTTCTTCAACCAGGCG+AGG | + | chr5.2:11906191-11906210 | None:intergenic | 60.0% | |
| CGCCACGCAGTTCTTCAACC+AGG | + | chr5.2:11906196-11906215 | None:intergenic | 60.0% | |
| CGCCTGGTTGAAGAACTGCG+TGG | - | chr5.2:11906191-11906210 | MS.gene64677:intron | 60.0% | |
| CTCCTGTTTCCGTAGCAGCG+GGG | - | chr5.2:11906615-11906634 | MS.gene64677:CDS | 60.0% | |
| GGAAAGCCCACGACCCAGTT+GGG | + | chr5.2:11904868-11904887 | None:intergenic | 60.0% | |
| GTTCTCAGCTAGGACGGGCA+GGG | - | chr5.2:11906732-11906751 | MS.gene64677:CDS | 60.0% | |
| ! | AACGGAACCCACGGAGCACT+CGG | - | chr5.2:11904684-11904703 | MS.gene64677:CDS | 60.0% |
| AGCCCCGCTGCTACGGAAAC+AGG | + | chr5.2:11906620-11906639 | None:intergenic | 65.0% | |
| AGCGGGGCTTGGCCACTCTT+TGG | - | chr5.2:11906631-11906650 | MS.gene64677:CDS | 65.0% | |
| CCGCCGCGGTTGTTATCCAC+CGG | - | chr5.2:11904631-11904650 | MS.gene64677:CDS | 65.0% | |
| CCGGTGGATAACAACCGCGG+CGG | + | chr5.2:11904634-11904653 | None:intergenic | 65.0% | |
| CCGTGCTCATCCATCTCCGG+TGG | + | chr5.2:11904650-11904669 | None:intergenic | 65.0% | |
| CGGAAAGCCCACGACCCAGT+TGG | + | chr5.2:11904869-11904888 | None:intergenic | 65.0% | |
| GTTTCCGTAGCAGCGGGGCT+TGG | - | chr5.2:11906620-11906639 | MS.gene64677:CDS | 65.0% | |
| TAGGCTGGACACCCTGTCCC+CGG | + | chr5.2:11905235-11905254 | None:intergenic | 65.0% | |
| ! | GAGAGTGGTAGTGACCGGCG+TGG | + | chr5.2:11904794-11904813 | None:intergenic | 65.0% |
| ! | GTGGTAGTGACCGGCGTGGA+CGG | + | chr5.2:11904790-11904809 | None:intergenic | 65.0% |
| GTGGCCAAGCCCCGCTGCTA+CGG | + | chr5.2:11906627-11906646 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 11904588 | 11907009 | 11904588 | ID=MS.gene64677 |
| chr5.2 | mRNA | 11904588 | 11907009 | 11904588 | ID=MS.gene64677.t1;Parent=MS.gene64677 |
| chr5.2 | exon | 11906488 | 11907009 | 11906488 | ID=MS.gene64677.t1.exon1;Parent=MS.gene64677.t1 |
| chr5.2 | CDS | 11906488 | 11907009 | 11906488 | ID=cds.MS.gene64677.t1;Parent=MS.gene64677.t1 |
| chr5.2 | exon | 11905331 | 11905652 | 11905331 | ID=MS.gene64677.t1.exon2;Parent=MS.gene64677.t1 |
| chr5.2 | CDS | 11905331 | 11905652 | 11905331 | ID=cds.MS.gene64677.t1;Parent=MS.gene64677.t1 |
| chr5.2 | exon | 11904588 | 11905078 | 11904588 | ID=MS.gene64677.t1.exon3;Parent=MS.gene64677.t1 |
| chr5.2 | CDS | 11904588 | 11905078 | 11904588 | ID=cds.MS.gene64677.t1;Parent=MS.gene64677.t1 |
| Gene Sequence |
| Protein sequence |
