Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68215.t1 | CAD29693.1 | 92 | 50 | 4 | 0 | 1 | 50 | 38 | 87 | 5.70E-17 | 97.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68215.t1 | Q03250 | 88.0 | 50 | 6 | 0 | 1 | 50 | 39 | 88 | 3.4e-18 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68215.t1 | A0A2K3P4T0 | 92.0 | 50 | 4 | 0 | 1 | 50 | 37 | 86 | 4.1e-17 | 97.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene68215 | -0.836607 | 8.47E-57 | -1.69E-46 |
| MS.gene04918 | MS.gene68215 | 0.80218 | 6.34E-49 | -1.69E-46 |
| MS.gene049255 | MS.gene68215 | 0.80803 | 3.78E-50 | -1.69E-46 |
| MS.gene049411 | MS.gene68215 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene68215 | 0.811267 | 7.63E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene68215 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene68215 | 0.820454 | 6.80E-53 | -1.69E-46 |
| MS.gene050437 | MS.gene68215 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene68215 | 0.838953 | 2.12E-57 | -1.69E-46 |
| MS.gene050945 | MS.gene68215 | 0.820241 | 7.61E-53 | -1.69E-46 |
| MS.gene050955 | MS.gene68215 | 0.85769 | 1.37E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene68215 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene68215 | 0.844369 | 7.89E-59 | -1.69E-46 |
| MS.gene051241 | MS.gene68215 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene68215 | 0.812636 | 3.84E-51 | -1.69E-46 |
| MS.gene05134 | MS.gene68215 | 0.823521 | 1.32E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene68215 | 0.801336 | 9.45E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene68215 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene68215 | 0.839934 | 1.18E-57 | -1.69E-46 |
| MS.gene053122 | MS.gene68215 | 0.820229 | 7.66E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene68215 | -0.823594 | 1.27E-53 | -1.69E-46 |
| MS.gene053401 | MS.gene68215 | 0.806726 | 7.15E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene68215 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene68215 | 0.807503 | 4.90E-50 | -1.69E-46 |
| MS.gene054142 | MS.gene68215 | 0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene68215 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene68215 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene68215 | 0.838825 | 2.28E-57 | -1.69E-46 |
| MS.gene055555 | MS.gene68215 | 0.877877 | 4.42E-69 | -1.69E-46 |
| MS.gene055580 | MS.gene68215 | -0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene055808 | MS.gene68215 | 0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene68215 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene056075 | MS.gene68215 | 0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene68215 | 0.825398 | 4.79E-54 | -1.69E-46 |
| MS.gene057694 | MS.gene68215 | 0.820818 | 5.61E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene68215 | 0.91063 | 1.51E-82 | -1.69E-46 |
| MS.gene058008 | MS.gene68215 | 0.802187 | 6.32E-49 | -1.69E-46 |
| MS.gene058088 | MS.gene68215 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene68215 | 0.803521 | 3.35E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene68215 | 0.825912 | 3.62E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene68215 | 0.827044 | 1.94E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene68215 | -0.82831 | 9.65E-55 | -1.69E-46 |
| MS.gene059901 | MS.gene68215 | -0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene68215 | 0.804016 | 2.64E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene68215 | 0.802712 | 4.93E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene68215 | 0.841263 | 5.28E-58 | -1.69E-46 |
| MS.gene060763 | MS.gene68215 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene060917 | MS.gene68215 | 0.824381 | 8.32E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene68215 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene68215 | 0.80309 | 4.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68215.t1 | MTR_4g070140 | 83.333 | 48 | 8 | 0 | 1 | 48 | 39 | 86 | 2.63e-23 | 90.5 |
| MS.gene68215.t1 | MTR_4g070080 | 84.211 | 57 | 9 | 0 | 1 | 57 | 37 | 93 | 7.03e-23 | 87.8 |
| MS.gene68215.t1 | MTR_4g070080 | 83.019 | 53 | 9 | 0 | 1 | 53 | 37 | 89 | 6.97e-22 | 85.9 |
| MS.gene68215.t1 | MTR_4g070190 | 67.901 | 81 | 9 | 1 | 1 | 81 | 39 | 102 | 3.19e-18 | 76.6 |
| MS.gene68215.t1 | MTR_3g014000 | 51.429 | 70 | 26 | 2 | 1 | 63 | 61 | 129 | 2.98e-13 | 63.2 |
| MS.gene68215.t1 | MTR_3g084040 | 63.265 | 49 | 17 | 1 | 1 | 49 | 67 | 114 | 1.53e-12 | 61.2 |
| MS.gene68215.t1 | MTR_4g109540 | 54.000 | 50 | 23 | 0 | 1 | 50 | 73 | 122 | 2.78e-12 | 62.8 |
| MS.gene68215.t1 | MTR_7g013730 | 50.000 | 50 | 25 | 0 | 1 | 50 | 71 | 120 | 2.80e-12 | 62.4 |
| MS.gene68215.t1 | MTR_4g109540 | 54.000 | 50 | 23 | 0 | 1 | 50 | 81 | 130 | 2.98e-12 | 62.8 |
| MS.gene68215.t1 | MTR_3g075500 | 60.000 | 50 | 20 | 0 | 1 | 50 | 237 | 286 | 5.62e-12 | 62.0 |
| MS.gene68215.t1 | MTR_3g025880 | 53.061 | 49 | 23 | 0 | 1 | 49 | 75 | 123 | 8.33e-12 | 62.0 |
| MS.gene68215.t1 | MTR_4g104470 | 60.000 | 50 | 20 | 0 | 1 | 50 | 247 | 296 | 1.23e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68215.t1 | AT4G39260 | 80.000 | 55 | 11 | 0 | 1 | 55 | 37 | 91 | 9.97e-25 | 91.3 |
| MS.gene68215.t1 | AT2G21660 | 87.234 | 47 | 6 | 0 | 1 | 47 | 39 | 85 | 1.14e-23 | 90.5 |
| MS.gene68215.t1 | AT2G21660 | 89.091 | 55 | 6 | 0 | 1 | 55 | 39 | 93 | 9.53e-23 | 88.6 |
| MS.gene68215.t1 | AT4G39260 | 78.846 | 52 | 11 | 0 | 1 | 52 | 37 | 88 | 1.96e-19 | 79.0 |
| MS.gene68215.t1 | AT4G39260 | 78.846 | 52 | 11 | 0 | 1 | 52 | 37 | 88 | 5.46e-19 | 79.0 |
| MS.gene68215.t1 | AT3G23830 | 58.491 | 53 | 22 | 0 | 1 | 53 | 66 | 118 | 3.38e-14 | 65.5 |
| MS.gene68215.t1 | AT3G23830 | 58.491 | 53 | 22 | 0 | 1 | 53 | 66 | 118 | 3.38e-14 | 65.5 |
| MS.gene68215.t1 | AT3G53460 | 56.863 | 51 | 22 | 0 | 1 | 51 | 288 | 338 | 7.83e-13 | 64.7 |
| MS.gene68215.t1 | AT3G53460 | 56.863 | 51 | 22 | 0 | 1 | 51 | 288 | 338 | 7.83e-13 | 64.7 |
| MS.gene68215.t1 | AT3G53460 | 56.863 | 51 | 22 | 0 | 1 | 51 | 288 | 338 | 7.83e-13 | 64.7 |
| MS.gene68215.t1 | AT3G53460 | 56.604 | 53 | 23 | 0 | 1 | 53 | 309 | 361 | 9.25e-13 | 64.7 |
| MS.gene68215.t1 | AT4G13850 | 58.491 | 53 | 22 | 0 | 1 | 53 | 66 | 118 | 2.48e-12 | 60.8 |
| MS.gene68215.t1 | AT4G13850 | 58.491 | 53 | 22 | 0 | 1 | 53 | 66 | 118 | 2.96e-12 | 60.8 |
| MS.gene68215.t1 | AT4G13850 | 58.491 | 53 | 22 | 0 | 1 | 53 | 66 | 118 | 3.25e-12 | 60.8 |
| MS.gene68215.t1 | AT4G13850 | 60.784 | 51 | 20 | 0 | 1 | 51 | 66 | 116 | 3.94e-12 | 60.1 |
| MS.gene68215.t1 | AT2G37220 | 52.941 | 51 | 24 | 0 | 1 | 51 | 235 | 285 | 7.25e-12 | 61.6 |
| MS.gene68215.t1 | AT3G26420 | 33.854 | 192 | 71 | 5 | 1 | 136 | 38 | 229 | 4.01e-11 | 59.3 |
| MS.gene68215.t1 | AT4G24770 | 54.902 | 51 | 23 | 0 | 1 | 51 | 275 | 325 | 7.00e-11 | 59.3 |
| MS.gene68215.t1 | AT4G24770 | 54.902 | 51 | 23 | 0 | 1 | 51 | 275 | 325 | 7.00e-11 | 59.3 |
| MS.gene68215.t1 | AT4G39260 | 75.000 | 32 | 8 | 0 | 1 | 32 | 37 | 68 | 7.16e-11 | 56.2 |
Find 78 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGATATGGTGGAGGAGG+CGG | 0.278119 | 3.2:-92166386 | MS.gene68215:CDS |
| GGTGGATATGGTGGAGGTGG+CGG | 0.285692 | 3.2:-92166443 | MS.gene68215:CDS |
| GTGGATATGGTGGAGGTGGC+GGG | 0.285761 | 3.2:-92166442 | MS.gene68215:CDS |
| CGTGATGGTGGTGGTGGATA+TGG | 0.293140 | 3.2:-92166335 | MS.gene68215:CDS |
| ACTGGAAGATCAAGAGGATT+TGG | 0.294131 | 3.2:-92166653 | MS.gene68215:CDS |
| GTGGATATGGTGGAGGAGGC+GGG | 0.301740 | 3.2:-92166385 | MS.gene68215:CDS |
| CGCGGAGGTGGTGGTGGATA+TGG | 0.305180 | 3.2:-92166491 | MS.gene68215:CDS |
| CGTGGAGGAGGTGGTGGATA+TGG | 0.306969 | 3.2:-92166398 | MS.gene68215:CDS |
| CGTCGTGGAGGTGGTGGATA+TGG | 0.325761 | 3.2:-92166455 | MS.gene68215:CDS |
| AGTGGCGGAGGCGGTGGTGG+TGG | 0.340361 | 3.2:-92166521 | MS.gene68215:CDS |
| GTTATCACCGATCGTGAAAC+TGG | 0.362798 | 3.2:-92166671 | MS.gene68215:CDS |
| TGGATATGGTGGAGGTGGCG+GGG | 0.366937 | 3.2:-92166441 | MS.gene68215:CDS |
| GGATATGGTGGAGGTGGCGG+GGG | 0.367929 | 3.2:-92166440 | MS.gene68215:CDS |
| TGGATATGGTGGAGGAGGCG+GGG | 0.372204 | 3.2:-92166384 | MS.gene68215:CDS |
| ATCACCGCCTCTCGAGTATC+TGG | 0.373006 | 3.2:+92166286 | None:intergenic |
| GGCGGAGGCGGTGGTGGTGG+TGG | 0.379371 | 3.2:-92166518 | MS.gene68215:CDS |
| GGCAGTGGCGGAGGCGGTGG+TGG | 0.383736 | 3.2:-92166524 | MS.gene68215:CDS |
| GGATATGGTGGAGGAGGCGG+GGG | 0.387784 | 3.2:-92166383 | MS.gene68215:CDS |
| CGTGGCAGTGGCGGAGGCGG+TGG | 0.400483 | 3.2:-92166527 | MS.gene68215:CDS |
| GGATACCGCGGAGGTGGTGG+TGG | 0.412147 | 3.2:-92166497 | MS.gene68215:CDS |
| GGTGGATACCGCGGAGGTGG+TGG | 0.418043 | 3.2:-92166500 | MS.gene68215:CDS |
| GGTTACGGAGGTGGTGGTGG+CGG | 0.440050 | 3.2:-92166362 | MS.gene68215:CDS |
| GGTGGTGGATATGGTGGAGG+TGG | 0.440960 | 3.2:-92166446 | MS.gene68215:CDS |
| GGTGGCGAACGTCGTGGAGG+TGG | 0.444469 | 3.2:-92166464 | MS.gene68215:CDS |
| GGTGGTGACCGTCGTGGAGG+AGG | 0.444501 | 3.2:-92166410 | MS.gene68215:CDS |
| GACCGTCGTGGAGGAGGTGG+TGG | 0.446949 | 3.2:-92166404 | MS.gene68215:CDS |
| GGTGGTGGATATGGTGGAGG+AGG | 0.448331 | 3.2:-92166389 | MS.gene68215:CDS |
| GGTGGTGGATATGGCGGAGG+TGG | 0.452527 | 3.2:-92166482 | MS.gene68215:CDS |
| CAGAGTCGTGGCAGTGGCGG+AGG | 0.453358 | 3.2:-92166533 | MS.gene68215:CDS |
| GGTGGTGGATACCGCGGAGG+TGG | 0.455995 | 3.2:-92166503 | MS.gene68215:CDS |
| AGTCGTGGCAGTGGCGGAGG+CGG | 0.456959 | 3.2:-92166530 | MS.gene68215:CDS |
| GTGGCTCTGACAGTAGAAAC+TGG | 0.459380 | 3.2:-92166259 | MS.gene68215:CDS |
| GGTGACCGTCGTGGAGGAGG+TGG | 0.465249 | 3.2:-92166407 | MS.gene68215:CDS |
| GGCGAACGTCGTGGAGGTGG+TGG | 0.469494 | 3.2:-92166461 | MS.gene68215:CDS |
| GATGGTGGTGGTGGATATGG+TGG | 0.469678 | 3.2:-92166332 | MS.gene68215:CDS |
| GGTGGTGGATATGGTGGAGG+TGG | 0.471808 | 3.2:-92166326 | MS.gene68215:CDS |
| GGATATGGTGGAGGTGGCTA+CGG | 0.473053 | 3.2:-92166320 | MS.gene68215:CDS |
| GGAGGAGGTGGTGGATATGG+TGG | 0.473329 | 3.2:-92166395 | MS.gene68215:CDS |
| GGAGGTGGTGGATATGGTGG+AGG | 0.473487 | 3.2:-92166392 | MS.gene68215:CDS |
| GGTGGTGGTGGATATGGCGG+AGG | 0.496613 | 3.2:-92166485 | MS.gene68215:CDS |
| GGTGGTGGTGGATATGGTGG+AGG | 0.497470 | 3.2:-92166329 | MS.gene68215:CDS |
| GCGATGAAAGATGCGATTGA+AGG | 0.503882 | 3.2:-92166605 | MS.gene68215:CDS |
| ATGAACGGCCAAGATCTTGA+TGG | 0.505893 | 3.2:-92166581 | MS.gene68215:CDS |
| GGTGGAGGTGGCTACGGAGA+TGG | 0.509409 | 3.2:-92166314 | MS.gene68215:CDS |
| TGTCACATTCTCTACGGAGC+AGG | 0.509697 | 3.2:-92166627 | MS.gene68215:CDS |
| GGACGTCGTGATGGTGGTGG+TGG | 0.511175 | 3.2:-92166341 | MS.gene68215:CDS |
| CGTGGAGGTGGTGGATATGG+TGG | 0.512534 | 3.2:-92166452 | MS.gene68215:CDS |
| GGTGGTGGCGGACGTCGTGA+TGG | 0.514583 | 3.2:-92166350 | MS.gene68215:CDS |
| TGGATTTGTCACATTCTCTA+CGG | 0.520808 | 3.2:-92166633 | MS.gene68215:CDS |
| TGATCTTCCAGTTTCACGAT+CGG | 0.521619 | 3.2:+92166664 | None:intergenic |
| GAGGCTCAGAGTCGTGGCAG+TGG | 0.522443 | 3.2:-92166539 | MS.gene68215:CDS |
| TGTTACGTCCATCAAGATCT+TGG | 0.527371 | 3.2:+92166573 | None:intergenic |
| TCGAGAGGCGGTGATGGCGG+TGG | 0.528930 | 3.2:-92166278 | MS.gene68215:CDS |
| GGAGGTGGTGGATATGGTGG+AGG | 0.534655 | 3.2:-92166449 | MS.gene68215:CDS |
| GGCGGACGTCGTGATGGTGG+TGG | 0.542567 | 3.2:-92166344 | MS.gene68215:CDS |
| CGATGAAAGATGCGATTGAA+GGG | 0.542649 | 3.2:-92166604 | MS.gene68215:CDS |
| GCTCAGAGTCGTGGCAGTGG+CGG | 0.545233 | 3.2:-92166536 | MS.gene68215:CDS |
| GGTGGCGGACGTCGTGATGG+TGG | 0.554420 | 3.2:-92166347 | MS.gene68215:CDS |
| AGATACTCGAGAGGCGGTGA+TGG | 0.555850 | 3.2:-92166284 | MS.gene68215:CDS |
| GGAGGTGGCTACGGAGATGG+TGG | 0.556120 | 3.2:-92166311 | MS.gene68215:CDS |
| CGTGAAACTGGAAGATCAAG+AGG | 0.575579 | 3.2:-92166659 | MS.gene68215:CDS |
| TACTCGAGAGGCGGTGATGG+CGG | 0.579779 | 3.2:-92166281 | MS.gene68215:CDS |
| ACGTAACATCACTGTGAATG+AGG | 0.581570 | 3.2:-92166558 | MS.gene68215:CDS |
| GGAGGTGGTGGTGGATATGG+CGG | 0.597374 | 3.2:-92166488 | MS.gene68215:CDS |
| TATGGAGGTGGTGACCGTCG+TGG | 0.615014 | 3.2:-92166416 | MS.gene68215:CDS |
| CTCTGACAGTAGAAACTGGA+GGG | 0.619176 | 3.2:-92166255 | MS.gene68215:CDS |
| GATGCGATTGAAGGGATGAA+CGG | 0.619661 | 3.2:-92166596 | MS.gene68215:CDS |
| GTGAATGAGGCTCAGAGTCG+TGG | 0.619893 | 3.2:-92166545 | MS.gene68215:CDS |
| GGTGGTGGTGGTGGATACCG+CGG | 0.621729 | 3.2:-92166509 | MS.gene68215:CDS |
| GGCGGAGGTGGCGAACGTCG+TGG | 0.626375 | 3.2:-92166470 | MS.gene68215:CDS |
| GGCTCCAGATACTCGAGAGG+CGG | 0.636811 | 3.2:-92166290 | MS.gene68215:CDS |
| GGAGGTGGCGAACGTCGTGG+AGG | 0.643779 | 3.2:-92166467 | MS.gene68215:CDS |
| GGAGGTGGTGACCGTCGTGG+AGG | 0.653524 | 3.2:-92166413 | MS.gene68215:CDS |
| GGTGGTGGTGGATACCGCGG+AGG | 0.661432 | 3.2:-92166506 | MS.gene68215:CDS |
| ATCCACCACCTCCTCCACGA+CGG | 0.697052 | 3.2:+92166402 | None:intergenic |
| CATATCCACCACCACCTCCG+CGG | 0.713479 | 3.2:+92166492 | None:intergenic |
| GCTCTGACAGTAGAAACTGG+AGG | 0.714944 | 3.2:-92166256 | MS.gene68215:CDS |
| GGTGGCTCCAGATACTCGAG+AGG | 0.728248 | 3.2:-92166293 | MS.gene68215:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGGATTTGTCACATTCTCTA+CGG | - | chr3.2:92166288-92166307 | MS.gene68215:CDS | 35.0% | |
| ACGTAACATCACTGTGAATG+AGG | - | chr3.2:92166363-92166382 | MS.gene68215:CDS | 40.0% | |
| ACTGGAAGATCAAGAGGATT+TGG | - | chr3.2:92166268-92166287 | MS.gene68215:CDS | 40.0% | |
| CGATGAAAGATGCGATTGAA+GGG | - | chr3.2:92166317-92166336 | MS.gene68215:CDS | 40.0% | |
| TGATCTTCCAGTTTCACGAT+CGG | + | chr3.2:92166260-92166279 | None:intergenic | 40.0% | |
| TGTTACGTCCATCAAGATCT+TGG | + | chr3.2:92166351-92166370 | None:intergenic | 40.0% | |
| ATGAACGGCCAAGATCTTGA+TGG | - | chr3.2:92166340-92166359 | MS.gene68215:CDS | 45.0% | |
| CGTGAAACTGGAAGATCAAG+AGG | - | chr3.2:92166262-92166281 | MS.gene68215:CDS | 45.0% | |
| CTCTGACAGTAGAAACTGGA+GGG | - | chr3.2:92166666-92166685 | MS.gene68215:CDS | 45.0% | |
| GATGCGATTGAAGGGATGAA+CGG | - | chr3.2:92166325-92166344 | MS.gene68215:CDS | 45.0% | |
| GCGATGAAAGATGCGATTGA+AGG | - | chr3.2:92166316-92166335 | MS.gene68215:CDS | 45.0% | |
| GTTATCACCGATCGTGAAAC+TGG | - | chr3.2:92166250-92166269 | MS.gene68215:CDS | 45.0% | |
| GCTCTGACAGTAGAAACTGG+AGG | - | chr3.2:92166665-92166684 | MS.gene68215:CDS | 50.0% | |
| TGTCACATTCTCTACGGAGC+AGG | - | chr3.2:92166294-92166313 | MS.gene68215:CDS | 50.0% | |
| !! | GTGGCTCTGACAGTAGAAAC+TGG | - | chr3.2:92166662-92166681 | MS.gene68215:CDS | 50.0% |
| AGATACTCGAGAGGCGGTGA+TGG | - | chr3.2:92166637-92166656 | MS.gene68215:CDS | 55.0% | |
| ATCACCGCCTCTCGAGTATC+TGG | + | chr3.2:92166638-92166657 | None:intergenic | 55.0% | |
| GTGAATGAGGCTCAGAGTCG+TGG | - | chr3.2:92166376-92166395 | MS.gene68215:CDS | 55.0% | |
| ! | GGATATGGTGGAGGTGGCTA+CGG | - | chr3.2:92166601-92166620 | MS.gene68215:CDS | 55.0% |
| !! | CGTGATGGTGGTGGTGGATA+TGG | - | chr3.2:92166586-92166605 | MS.gene68215:CDS | 55.0% |
| !! | GATGGTGGTGGTGGATATGG+TGG | - | chr3.2:92166589-92166608 | MS.gene68215:CDS | 55.0% |
| ATCCACCACCTCCTCCACGA+CGG | + | chr3.2:92166522-92166541 | None:intergenic | 60.0% | |
| CATATCCACCACCACCTCCG+CGG | + | chr3.2:92166432-92166451 | None:intergenic | 60.0% | |
| GGCTCCAGATACTCGAGAGG+CGG | - | chr3.2:92166631-92166650 | MS.gene68215:CDS | 60.0% | |
| GGTGGCTCCAGATACTCGAG+AGG | - | chr3.2:92166628-92166647 | MS.gene68215:CDS | 60.0% | |
| TATGGAGGTGGTGACCGTCG+TGG | - | chr3.2:92166505-92166524 | MS.gene68215:CDS | 60.0% | |
| ! | GGTGGATATGGTGGAGGAGG+CGG | - | chr3.2:92166535-92166554 | MS.gene68215:CDS | 60.0% |
| ! | GGTGGATATGGTGGAGGTGG+CGG | - | chr3.2:92166478-92166497 | MS.gene68215:CDS | 60.0% |
| ! | GTGGATATGGTGGAGGAGGC+GGG | - | chr3.2:92166536-92166555 | MS.gene68215:CDS | 60.0% |
| ! | GTGGATATGGTGGAGGTGGC+GGG | - | chr3.2:92166479-92166498 | MS.gene68215:CDS | 60.0% |
| ! | TACTCGAGAGGCGGTGATGG+CGG | - | chr3.2:92166640-92166659 | MS.gene68215:CDS | 60.0% |
| ! | TGGATATGGTGGAGGAGGCG+GGG | - | chr3.2:92166537-92166556 | MS.gene68215:CDS | 60.0% |
| ! | TGGATATGGTGGAGGTGGCG+GGG | - | chr3.2:92166480-92166499 | MS.gene68215:CDS | 60.0% |
| !! | CGTCGTGGAGGTGGTGGATA+TGG | - | chr3.2:92166466-92166485 | MS.gene68215:CDS | 60.0% |
| !! | CGTGGAGGAGGTGGTGGATA+TGG | - | chr3.2:92166523-92166542 | MS.gene68215:CDS | 60.0% |
| !! | CGTGGAGGTGGTGGATATGG+TGG | - | chr3.2:92166469-92166488 | MS.gene68215:CDS | 60.0% |
| !! | GGAGGAGGTGGTGGATATGG+TGG | - | chr3.2:92166526-92166545 | MS.gene68215:CDS | 60.0% |
| !! | GGAGGTGGTGGATATGGTGG+AGG | - | chr3.2:92166472-92166491 | MS.gene68215:CDS | 60.0% |
| !! | GGAGGTGGTGGTGGATATGG+CGG | - | chr3.2:92166433-92166452 | MS.gene68215:CDS | 60.0% |
| !! | GGTGGTGGATATGGTGGAGG+AGG | - | chr3.2:92166475-92166494 | MS.gene68215:CDS | 60.0% |
| !! | GGTGGTGGATATGGTGGAGG+TGG | - | chr3.2:92166475-92166494 | MS.gene68215:CDS | 60.0% |
| !! | GGTGGTGGTGGATATGGTGG+AGG | - | chr3.2:92166592-92166611 | MS.gene68215:CDS | 60.0% |
| GAGGCTCAGAGTCGTGGCAG+TGG | - | chr3.2:92166382-92166401 | MS.gene68215:CDS | 65.0% | |
| GCTCAGAGTCGTGGCAGTGG+CGG | - | chr3.2:92166385-92166404 | MS.gene68215:CDS | 65.0% | |
| GGAGGTGGCTACGGAGATGG+TGG | - | chr3.2:92166610-92166629 | MS.gene68215:CDS | 65.0% | |
| GGTGGAGGTGGCTACGGAGA+TGG | - | chr3.2:92166607-92166626 | MS.gene68215:CDS | 65.0% | |
| ! | GGATATGGTGGAGGAGGCGG+GGG | - | chr3.2:92166538-92166557 | MS.gene68215:CDS | 65.0% |
| ! | GGATATGGTGGAGGTGGCGG+GGG | - | chr3.2:92166481-92166500 | MS.gene68215:CDS | 65.0% |
| !! | CGCGGAGGTGGTGGTGGATA+TGG | - | chr3.2:92166430-92166449 | MS.gene68215:CDS | 65.0% |
| !! | GGACGTCGTGATGGTGGTGG+TGG | - | chr3.2:92166580-92166599 | MS.gene68215:CDS | 65.0% |
| !! | GGTGGTGGATATGGCGGAGG+TGG | - | chr3.2:92166439-92166458 | MS.gene68215:CDS | 65.0% |
| !! | GGTGGTGGTGGATATGGCGG+AGG | - | chr3.2:92166436-92166455 | MS.gene68215:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGATACCG+CGG | - | chr3.2:92166412-92166431 | MS.gene68215:CDS | 65.0% |
| !! | GGTTACGGAGGTGGTGGTGG+CGG | - | chr3.2:92166559-92166578 | MS.gene68215:CDS | 65.0% |
| CAGAGTCGTGGCAGTGGCGG+AGG | - | chr3.2:92166388-92166407 | MS.gene68215:CDS | 70.0% | |
| GACCGTCGTGGAGGAGGTGG+TGG | - | chr3.2:92166517-92166536 | MS.gene68215:CDS | 70.0% | |
| GGAGGTGGCGAACGTCGTGG+AGG | - | chr3.2:92166454-92166473 | MS.gene68215:CDS | 70.0% | |
| GGAGGTGGTGACCGTCGTGG+AGG | - | chr3.2:92166508-92166527 | MS.gene68215:CDS | 70.0% | |
| GGCGAACGTCGTGGAGGTGG+TGG | - | chr3.2:92166460-92166479 | MS.gene68215:CDS | 70.0% | |
| GGTGACCGTCGTGGAGGAGG+TGG | - | chr3.2:92166514-92166533 | MS.gene68215:CDS | 70.0% | |
| GGTGGAGGAGGCGGGGGTTA+CGG | - | chr3.2:92166544-92166563 | MS.gene68215:CDS | 70.0% | |
| GGTGGATACCGCGGAGGTGG+TGG | - | chr3.2:92166421-92166440 | MS.gene68215:CDS | 70.0% | |
| GGTGGCGAACGTCGTGGAGG+TGG | - | chr3.2:92166457-92166476 | MS.gene68215:CDS | 70.0% | |
| GGTGGTGACCGTCGTGGAGG+AGG | - | chr3.2:92166511-92166530 | MS.gene68215:CDS | 70.0% | |
| ! | AGTCGTGGCAGTGGCGGAGG+CGG | - | chr3.2:92166391-92166410 | MS.gene68215:CDS | 70.0% |
| ! | GGATACCGCGGAGGTGGTGG+TGG | - | chr3.2:92166424-92166443 | MS.gene68215:CDS | 70.0% |
| ! | GGGGGTTACGGAGGTGGTGG+TGG | - | chr3.2:92166556-92166575 | MS.gene68215:CDS | 70.0% |
| !! | GGAGGTGGCGGGGGTTATGG+AGG | - | chr3.2:92166490-92166509 | MS.gene68215:CDS | 70.0% |
| !! | GGCGGACGTCGTGATGGTGG+TGG | - | chr3.2:92166577-92166596 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGAGGTGGCGGGGGTTA+TGG | - | chr3.2:92166487-92166506 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGCGGACGTCGTGATGG+TGG | - | chr3.2:92166574-92166593 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGCGGGGGTTATGGAGG+TGG | - | chr3.2:92166493-92166512 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGTGGATACCGCGGAGG+TGG | - | chr3.2:92166418-92166437 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGTGGCGGACGTCGTGA+TGG | - | chr3.2:92166571-92166590 | MS.gene68215:CDS | 70.0% |
| !! | GGTGGTGGTGGATACCGCGG+AGG | - | chr3.2:92166415-92166434 | MS.gene68215:CDS | 70.0% |
| !! | TCGAGAGGCGGTGATGGCGG+TGG | - | chr3.2:92166643-92166662 | MS.gene68215:CDS | 70.0% |
| GGAGGAGGCGGGGGTTACGG+AGG | - | chr3.2:92166547-92166566 | MS.gene68215:CDS | 75.0% | |
| GGAGGCGGGGGTTACGGAGG+TGG | - | chr3.2:92166550-92166569 | MS.gene68215:CDS | 75.0% | |
| GGCGGAGGTGGCGAACGTCG+TGG | - | chr3.2:92166451-92166470 | MS.gene68215:CDS | 75.0% | |
| GGCGGGGGTTACGGAGGTGG+TGG | - | chr3.2:92166553-92166572 | MS.gene68215:CDS | 75.0% | |
| ! | AGTGGCGGAGGCGGTGGTGG+TGG | - | chr3.2:92166400-92166419 | MS.gene68215:CDS | 75.0% |
| !! | CGTGGCAGTGGCGGAGGCGG+TGG | - | chr3.2:92166394-92166413 | MS.gene68215:CDS | 80.0% |
| !! | GGCAGTGGCGGAGGCGGTGG+TGG | - | chr3.2:92166397-92166416 | MS.gene68215:CDS | 80.0% |
| !!! | GGCGGAGGCGGTGGTGGTGG+TGG | - | chr3.2:92166403-92166422 | MS.gene68215:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 92166250 | 92166693 | 92166250 | ID=MS.gene68215 |
| chr3.2 | mRNA | 92166250 | 92166693 | 92166250 | ID=MS.gene68215.t1;Parent=MS.gene68215 |
| chr3.2 | exon | 92166250 | 92166693 | 92166250 | ID=MS.gene68215.t1.exon1;Parent=MS.gene68215.t1 |
| chr3.2 | CDS | 92166250 | 92166693 | 92166250 | ID=cds.MS.gene68215.t1;Parent=MS.gene68215.t1 |
| Gene Sequence |
| Protein sequence |
