Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055979.t1 | XP_003625286.1 | 96.9 | 354 | 11 | 0 | 1 | 354 | 1 | 354 | 2.10E-182 | 648.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055979.t1 | Q8BK64 | 29.4 | 354 | 229 | 7 | 1 | 353 | 1 | 334 | 7.1e-38 | 159.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055979.t1 | G7KW94 | 96.9 | 354 | 11 | 0 | 1 | 354 | 1 | 354 | 1.5e-182 | 648.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene055979 | 0.811362 | 7.27E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene055979 | 0.808846 | 2.53E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene055979 | 0.835143 | 1.99E-56 | -1.69E-46 |
| MS.gene050386 | MS.gene055979 | 0.836933 | 7.00E-57 | -1.69E-46 |
| MS.gene050689 | MS.gene055979 | 0.852466 | 4.53E-61 | -1.69E-46 |
| MS.gene050838 | MS.gene055979 | 0.838489 | 2.79E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene055979 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene055979 | 0.834925 | 2.26E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene055979 | 0.83829 | 3.14E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene055979 | 0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene055979 | 0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene059146 | 0.81687 | 4.43E-52 | -1.69E-46 |
| MS.gene055979 | MS.gene061869 | 0.804281 | 2.33E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene061874 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene061878 | 0.81089 | 9.20E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene062770 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene065357 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene066105 | 0.800313 | 1.53E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene068022 | 0.800852 | 1.19E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene06984 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene055979 | MS.gene07100 | 0.834296 | 3.25E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene071751 | 0.804635 | 1.96E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene072641 | 0.836004 | 1.21E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene072740 | 0.806822 | 6.83E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene072808 | 0.826045 | 3.36E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene08793 | 0.826442 | 2.71E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene08922 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene09297 | 0.805392 | 1.36E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene22321 | 0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene22695 | 0.806371 | 8.50E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene22740 | 0.841363 | 4.97E-58 | -1.69E-46 |
| MS.gene055979 | MS.gene24531 | 0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene24930 | 0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene25923 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene28409 | 0.807769 | 4.30E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene28488 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene055979 | MS.gene28632 | 0.835077 | 2.07E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene32134 | 0.838308 | 3.11E-57 | -1.69E-46 |
| MS.gene055979 | MS.gene34508 | 0.801371 | 9.29E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene35048 | 0.83142 | 1.69E-55 | -1.69E-46 |
| MS.gene055979 | MS.gene37988 | 0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene38256 | 0.830625 | 2.64E-55 | -1.69E-46 |
| MS.gene055979 | MS.gene38262 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene055979 | MS.gene39143 | 0.836688 | 8.08E-57 | -1.69E-46 |
| MS.gene055979 | MS.gene40055 | 0.822713 | 2.04E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene40595 | 0.82508 | 5.70E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene44141 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene44240 | 0.811776 | 5.91E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene44631 | 0.825634 | 4.21E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene44844 | 0.801225 | 9.96E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene51445 | 0.823801 | 1.14E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene52837 | 0.870156 | 1.80E-66 | -1.69E-46 |
| MS.gene055979 | MS.gene54919 | 0.857601 | 1.46E-62 | -1.69E-46 |
| MS.gene055979 | MS.gene56451 | 0.810066 | 1.39E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene56462 | 0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene58098 | 0.825126 | 5.56E-54 | -1.69E-46 |
| MS.gene055979 | MS.gene66089 | 0.814899 | 1.22E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene68136 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene68215 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene68735 | 0.836458 | 9.25E-57 | -1.69E-46 |
| MS.gene055979 | MS.gene70398 | 0.834765 | 2.48E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene71616 | 0.816871 | 4.42E-52 | -1.69E-46 |
| MS.gene055979 | MS.gene71994 | 0.822663 | 2.10E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene72413 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene73364 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene76344 | 0.837467 | 5.11E-57 | -1.69E-46 |
| MS.gene055979 | MS.gene81280 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene81288 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene85593 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene055979 | MS.gene85610 | 0.832886 | 7.32E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene86919 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene055979 | MS.gene87406 | 0.858702 | 6.87E-63 | -1.69E-46 |
| MS.gene055979 | MS.gene88718 | 0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene91307 | 0.819912 | 9.05E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene92572 | 0.800884 | 1.17E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene94952 | 0.822341 | 2.49E-53 | -1.69E-46 |
| MS.gene055979 | MS.gene95235 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene055979 | MS.gene96690 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene98990 | 0.840181 | 1.01E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055979.t1 | MTR_7g093500 | 96.328 | 354 | 13 | 0 | 1 | 354 | 1 | 354 | 0.0 | 696 |
| MS.gene055979.t1 | MTR_0136s0060 | 70.704 | 355 | 92 | 4 | 1 | 354 | 1 | 344 | 0.0 | 506 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055979.t1 | AT3G12050 | 68.889 | 360 | 106 | 1 | 1 | 354 | 1 | 360 | 0.0 | 505 |
| MS.gene055979.t1 | AT3G12050 | 61.944 | 360 | 92 | 2 | 1 | 354 | 1 | 321 | 3.05e-151 | 429 |
Find 120 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGGAAGGGGTTGATTT+TGG | 0.174539 | 7.4:+15419917 | MS.gene055979:CDS |
| TAGGGTTTGGGTTGAGAGTA+TGG | 0.252741 | 7.4:+15419947 | MS.gene055979:CDS |
| TTTGGAGAAGGTTAGGGTTT+GGG | 0.255145 | 7.4:+15419935 | MS.gene055979:CDS |
| AATTCGTTGTTGAAGGTTAA+TGG | 0.267141 | 7.4:+15419780 | MS.gene055979:CDS |
| ACCTCCAAATCCTCCTTAAC+AGG | 0.344484 | 7.4:-15419981 | None:intergenic |
| TCCGATTGGGAGGAGGATTA+AGG | 0.345883 | 7.4:+15419881 | MS.gene055979:CDS |
| AAATCAATCTCACTGTTTCC+TGG | 0.353923 | 7.4:+15419730 | MS.gene055979:CDS |
| TGGTCCTGTTAAGGAGGATT+TGG | 0.362861 | 7.4:+15419977 | MS.gene055979:CDS |
| GCCGTTGAGGATGGTGAGAT+TGG | 0.362978 | 7.4:-15419613 | None:intergenic |
| GGAGAGAAGGTTGGTGAAGA+AGG | 0.364115 | 7.4:-15419592 | None:intergenic |
| TTGTGCAGAGGTGGAGATTC+GGG | 0.367967 | 7.4:+15420321 | MS.gene055979:CDS |
| CGAGGATTAGTAAGGAGGTT+GGG | 0.381108 | 7.4:+15420231 | MS.gene055979:CDS |
| ACAACAGTAACTCCTGATTC+AGG | 0.382479 | 7.4:-15421709 | None:intergenic |
| GCAGAATAATGTTAATGTTC+CGG | 0.396349 | 7.4:+15420031 | MS.gene055979:CDS |
| GGTTAAGAAGCCGGCGGCTC+AGG | 0.396754 | 7.4:+15420001 | MS.gene055979:CDS |
| ATTGTGCAGAGGTGGAGATT+CGG | 0.410427 | 7.4:+15420320 | MS.gene055979:CDS |
| CCGATGTACCTGAGGAAGAT+AGG | 0.412013 | 7.4:+15421746 | MS.gene055979:CDS |
| CTGATGAGGATCCTGATGTT+AGG | 0.418634 | 7.4:+15419838 | MS.gene055979:CDS |
| TGAAGGGAATTCGTTGTTGA+AGG | 0.423056 | 7.4:+15419773 | MS.gene055979:CDS |
| GCATTCTCATCAGAAATATA+CGG | 0.424227 | 7.4:-15419816 | None:intergenic |
| ATCCTTCGCTTCACCTTCCC+AGG | 0.428288 | 7.4:-15419748 | None:intergenic |
| TGCTTCACTGCCTGAGCCGC+CGG | 0.429850 | 7.4:-15420011 | None:intergenic |
| CCCCTTACGGATGTTGATGT+AGG | 0.433756 | 7.4:-15419688 | None:intergenic |
| GAAGAAGAAGGAGAGTAAGA+AGG | 0.437370 | 7.4:+15420103 | MS.gene055979:CDS |
| GGCGAGAGGTGGTCCTGTTA+AGG | 0.438118 | 7.4:+15419968 | MS.gene055979:CDS |
| AAGAAGAAGGAGAGTAAGAA+GGG | 0.442005 | 7.4:+15420104 | MS.gene055979:CDS |
| GGATTTGTTTGAGATATTGA+TGG | 0.445610 | 7.4:+15420172 | MS.gene055979:CDS |
| CTAACGTTCACAACTGGTAC+TGG | 0.456873 | 7.4:+15419538 | MS.gene055979:CDS |
| GACGGAGAAGTTTAATTGTC+GGG | 0.459720 | 7.4:+15420145 | MS.gene055979:CDS |
| TTGTGAACGTTAGTTCCGTC+TGG | 0.461471 | 7.4:-15419528 | None:intergenic |
| CAGGTACATCGGTATGTGTC+AGG | 0.462088 | 7.4:-15421735 | None:intergenic |
| AGAAGGAGAGTAAGAAGGGA+AGG | 0.462970 | 7.4:+15420108 | MS.gene055979:CDS |
| GAAGTTTAATTGTCGGGCGA+AGG | 0.463952 | 7.4:+15420151 | MS.gene055979:CDS |
| TCCTGTTAAGGAGGATTTGG+AGG | 0.465113 | 7.4:+15419980 | MS.gene055979:CDS |
| CACCGTACGATGGCGAAATA+CGG | 0.466497 | 7.4:+15419471 | None:intergenic |
| GGATCCTGATGTTAGGGTTA+CGG | 0.467620 | 7.4:+15419845 | MS.gene055979:CDS |
| GGAAGTTGATTGTGCAGAGG+TGG | 0.472069 | 7.4:+15420312 | MS.gene055979:CDS |
| GATTGATGGTGCTCAATCTC+AGG | 0.472231 | 7.4:+15420349 | MS.gene055979:CDS |
| TCCTTAATCCTCCTCCCAAT+CGG | 0.476371 | 7.4:-15419882 | None:intergenic |
| TTCTCCTCCTTCTTAACAGA+AGG | 0.482815 | 7.4:-15420083 | None:intergenic |
| GCTGTTGTTGTCACCGTCGC+CGG | 0.485289 | 7.4:-15420050 | None:intergenic |
| ACGGAACTAACGTTCACAAC+TGG | 0.492347 | 7.4:+15419532 | MS.gene055979:CDS |
| AATCAATCTCACTGTTTCCT+GGG | 0.495075 | 7.4:+15419731 | MS.gene055979:CDS |
| AGGCTTCGCCGGTGAGGCTA+CGG | 0.500973 | 7.4:-15419668 | None:intergenic |
| TAATGCGAGGATTAGTAAGG+AGG | 0.501858 | 7.4:+15420226 | MS.gene055979:CDS |
| CAGGGATAATCTTCCCCTTA+CGG | 0.502173 | 7.4:-15419701 | None:intergenic |
| AGATATTGATGGATGAGAAT+AGG | 0.505287 | 7.4:+15420183 | MS.gene055979:CDS |
| AGAGGTGGAGATTCGGGAGC+TGG | 0.508858 | 7.4:+15420327 | MS.gene055979:CDS |
| AGGATGCGATGTTTCAGAAA+GGG | 0.510988 | 7.4:+15419901 | MS.gene055979:CDS |
| GAGTAATGCGAGGATTAGTA+AGG | 0.514457 | 7.4:+15420223 | MS.gene055979:CDS |
| TAATGTTAATGTTCCGGCGA+CGG | 0.516023 | 7.4:+15420037 | MS.gene055979:CDS |
| GAGGATTAGTAAGGAGGTTG+GGG | 0.520662 | 7.4:+15420232 | MS.gene055979:CDS |
| ATGGATGAGAATAGGTGGAA+GGG | 0.522678 | 7.4:+15420191 | MS.gene055979:CDS |
| CGTAAGGGGAAGATTATCCC+TGG | 0.522864 | 7.4:+15419702 | MS.gene055979:CDS |
| GGATTTGGAGGTTAAGAAGC+CGG | 0.527030 | 7.4:+15419992 | MS.gene055979:CDS |
| GTCAAGTCCTTCTGTTAAGA+AGG | 0.528667 | 7.4:+15420076 | MS.gene055979:CDS |
| TAAGAAGGAGGAGAAGAAGA+AGG | 0.529157 | 7.4:+15420091 | MS.gene055979:CDS |
| GCGAGGATTAGTAAGGAGGT+TGG | 0.536552 | 7.4:+15420230 | MS.gene055979:CDS |
| GATGTTGATGTAGGCTTCGC+CGG | 0.537363 | 7.4:-15419679 | None:intergenic |
| AATCTCACTGTTTCCTGGGA+AGG | 0.538242 | 7.4:+15419735 | MS.gene055979:CDS |
| TGTGGTGGAGAACACTGAAA+GGG | 0.538891 | 7.4:+15421869 | MS.gene055979:CDS |
| AGATTCGGGAGCTGGATTGA+TGG | 0.538981 | 7.4:+15420335 | MS.gene055979:CDS |
| AAGGAAGAATATTGTGATGA+CGG | 0.539210 | 7.4:+15420127 | MS.gene055979:CDS |
| TGACGGAGAAGTTTAATTGT+CGG | 0.541011 | 7.4:+15420144 | MS.gene055979:CDS |
| TTGAAGATGAAAGTCCGATT+GGG | 0.541854 | 7.4:+15419868 | MS.gene055979:CDS |
| CGGAGACAAACTGTCTAGAA+TGG | 0.546185 | 7.4:+15419562 | MS.gene055979:CDS |
| GGATGGTGAGATTGGAGAGA+AGG | 0.546910 | 7.4:-15419605 | None:intergenic |
| GATGGATGAGAATAGGTGGA+AGG | 0.547723 | 7.4:+15420190 | MS.gene055979:CDS |
| GTTGAAGATGAAAGTCCGAT+TGG | 0.549226 | 7.4:+15419867 | MS.gene055979:CDS |
| GTTACCTTCGCCGTTGAGGA+TGG | 0.556749 | 7.4:-15419622 | None:intergenic |
| AGAACACTGAAAGGGGATGG+AGG | 0.557325 | 7.4:+15421877 | MS.gene055979:CDS |
| CTGTGGTGGAGAACACTGAA+AGG | 0.557979 | 7.4:+15421868 | MS.gene055979:CDS |
| GAACACTGAAAGGGGATGGA+GGG | 0.559482 | 7.4:+15421878 | MS.gene055979:CDS |
| AATACTAACCTATCTTCCTC+AGG | 0.560053 | 7.4:-15421754 | None:intergenic |
| AAGGATGCGATGTTTCAGAA+AGG | 0.560413 | 7.4:+15419900 | MS.gene055979:CDS |
| AGCCTACATCAACATCCGTA+AGG | 0.561299 | 7.4:+15419686 | MS.gene055979:CDS |
| TATTGATGGATGAGAATAGG+TGG | 0.562657 | 7.4:+15420186 | MS.gene055979:CDS |
| ATGAAAGTCCGATTGGGAGG+AGG | 0.565459 | 7.4:+15419874 | MS.gene055979:CDS |
| GGTGAAGCGAAGGATAATGA+AGG | 0.566763 | 7.4:+15419756 | MS.gene055979:CDS |
| GCGATGTTTCAGAAAGGGAA+GGG | 0.570524 | 7.4:+15419906 | MS.gene055979:CDS |
| GCAATGTGGAGTTGCAAGAA+GGG | 0.570659 | 7.4:+15420291 | MS.gene055979:CDS |
| TGGAGAACACTGAAAGGGGA+TGG | 0.571952 | 7.4:+15421874 | MS.gene055979:CDS |
| GGTGAGATTGGAGAGAAGGT+TGG | 0.574769 | 7.4:-15419601 | None:intergenic |
| AGCAATGTGGAGTTGCAAGA+AGG | 0.575330 | 7.4:+15420290 | MS.gene055979:CDS |
| TCAACCGTAACCCTAACATC+AGG | 0.576029 | 7.4:-15419849 | None:intergenic |
| TGATGAGGATCCTGATGTTA+GGG | 0.576854 | 7.4:+15419839 | MS.gene055979:CDS |
| CGATGTTTCAGAAAGGGAAG+GGG | 0.576926 | 7.4:+15419907 | MS.gene055979:CDS |
| CTCACCATCCTCAACGGCGA+AGG | 0.582871 | 7.4:+15419618 | MS.gene055979:CDS |
| GCCTACATCAACATCCGTAA+GGG | 0.584822 | 7.4:+15419687 | MS.gene055979:CDS |
| TCCAATCTCACCATCCTCAA+CGG | 0.585506 | 7.4:+15419612 | MS.gene055979:CDS |
| AGAGGTTACCTTCGCCGTTG+AGG | 0.594117 | 7.4:-15419626 | None:intergenic |
| TGCGATGTTTCAGAAAGGGA+AGG | 0.595442 | 7.4:+15419905 | MS.gene055979:CDS |
| TGAGATTGATTTCATACCCA+GGG | 0.595629 | 7.4:-15419719 | None:intergenic |
| CCTATCTTCCTCAGGTACAT+CGG | 0.599844 | 7.4:-15421746 | None:intergenic |
| ATCGTTGAAGAACGTCCAGA+CGG | 0.600203 | 7.4:+15419513 | MS.gene055979:CDS |
| ACTACTCTCCGTAGCCTCAC+CGG | 0.601939 | 7.4:+15419660 | MS.gene055979:CDS |
| AAGATGAAAGTCCGATTGGG+AGG | 0.618852 | 7.4:+15419871 | MS.gene055979:CDS |
| GAGAGGTGGTCCTGTTAAGG+AGG | 0.620858 | 7.4:+15419971 | MS.gene055979:CDS |
| GTGAAGCGAAGGATAATGAA+GGG | 0.634620 | 7.4:+15419757 | MS.gene055979:CDS |
| GTGAGATTGATTTCATACCC+AGG | 0.635538 | 7.4:-15419720 | None:intergenic |
| TTCCTGGGAAGGTGAAGCGA+AGG | 0.635710 | 7.4:+15419746 | MS.gene055979:CDS |
| GGTGAGGCTACGGAGAGTAG+TGG | 0.639392 | 7.4:-15419658 | None:intergenic |
| GTTGAGAGTATGGCGAGAGG+TGG | 0.642074 | 7.4:+15419957 | MS.gene055979:CDS |
| TTCTGATGAGAATGCTGATG+AGG | 0.643664 | 7.4:+15419824 | MS.gene055979:CDS |
| CGTTCACAACTGGTACTGGT+CGG | 0.643855 | 7.4:+15419542 | MS.gene055979:CDS |
| AAGTCCTTCTGTTAAGAAGG+AGG | 0.644149 | 7.4:+15420079 | MS.gene055979:CDS |
| TGATGTAGGCTTCGCCGGTG+AGG | 0.647107 | 7.4:-15419674 | None:intergenic |
| TGGGTTGAGAGTATGGCGAG+AGG | 0.647931 | 7.4:+15419954 | MS.gene055979:CDS |
| ACGGCGAAGGTGATAAACGA+TGG | 0.652154 | 7.4:+15419490 | MS.gene055979:CDS |
| CCTACATCAACATCCGTAAG+GGG | 0.655539 | 7.4:+15419688 | MS.gene055979:CDS |
| GACACATACCGATGTACCTG+AGG | 0.657140 | 7.4:+15421738 | MS.gene055979:CDS |
| GTATGGGAATGCTACTGTGG+TGG | 0.667144 | 7.4:+15421854 | MS.gene055979:CDS |
| GTAAGGGGAAGATTATCCCT+GGG | 0.667636 | 7.4:+15419703 | MS.gene055979:CDS |
| ACGATGGCGAAATACGGCGA+AGG | 0.671334 | 7.4:+15419477 | None:intergenic |
| AAGGGAAGTTGATTGTGCAG+AGG | 0.679090 | 7.4:+15420309 | MS.gene055979:CDS |
| CAGGTATGGGAATGCTACTG+TGG | 0.679562 | 7.4:+15421851 | MS.gene055979:intron |
| TTTGGAGGTTAAGAAGCCGG+CGG | 0.691214 | 7.4:+15419995 | MS.gene055979:CDS |
| GTCTGTCACTGGAAGCAATG+TGG | 0.701493 | 7.4:+15420277 | MS.gene055979:CDS |
| AGGATTAGTAAGGAGGTTGG+GGG | 0.725145 | 7.4:+15420233 | MS.gene055979:CDS |
| GTGGTGGAGAACACTGAAAG+GGG | 0.728002 | 7.4:+15421870 | MS.gene055979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATATATGATGTTA+TGG | + | chr7.4:15421499-15421518 | MS.gene055979:intron | 10.0% |
| !!! | TAACATCATATATATTTTTT+AGG | - | chr7.4:15421499-15421518 | None:intergenic | 10.0% |
| !! | AATCTAATTGAATAATGTTA+GGG | + | chr7.4:15421156-15421175 | MS.gene055979:intron | 15.0% |
| !! | ATAAGTAAATAAATAATGCT+AGG | + | chr7.4:15420781-15420800 | MS.gene055979:intron | 15.0% |
| !!! | AGGTTAGTATTTTAAATATT+GGG | + | chr7.4:15421766-15421785 | MS.gene055979:intron | 15.0% |
| !!! | TAGGTTAGTATTTTAAATAT+TGG | + | chr7.4:15421765-15421784 | MS.gene055979:intron | 15.0% |
| !! | AATGTTTATGTTATCTTTCT+GGG | + | chr7.4:15421798-15421817 | MS.gene055979:intron | 20.0% |
| !! | AGACTATAATTACATTAAGT+TGG | + | chr7.4:15420735-15420754 | MS.gene055979:intron | 20.0% |
| !! | ATAACAAATAGTATTCACTT+CGG | - | chr7.4:15421382-15421401 | None:intergenic | 20.0% |
| !! | GAATCTAATTGAATAATGTT+AGG | + | chr7.4:15421155-15421174 | MS.gene055979:intron | 20.0% |
| !! | TAATGAGTAAATACTCAAAT+TGG | + | chr7.4:15420845-15420864 | MS.gene055979:intron | 20.0% |
| !!! | AATCAAATTTTTCTTTTCCT+TGG | + | chr7.4:15420955-15420974 | MS.gene055979:intron | 20.0% |
| !!! | ATTTTGAAAAAAGTCATCAA+TGG | - | chr7.4:15421534-15421553 | None:intergenic | 20.0% |
| !!! | TAAAGTTGATATATCATGAA+TGG | + | chr7.4:15421128-15421147 | MS.gene055979:intron | 20.0% |
| !!! | TTTTAAATATTGGGAATGAT+TGG | + | chr7.4:15421775-15421794 | MS.gene055979:intron | 20.0% |
| ! | AATTGGTACTTGAAATTGTA+AGG | + | chr7.4:15420862-15420881 | MS.gene055979:intron | 25.0% |
| ! | ATAAAATCTCGATAATCTGA+GGG | - | chr7.4:15420903-15420922 | None:intergenic | 25.0% |
| ! | ATCAATTATAATAGCAACGA+GGG | - | chr7.4:15421413-15421432 | None:intergenic | 25.0% |
| ! | ATTAACGTAATGATGCATAA+TGG | + | chr7.4:15421652-15421671 | MS.gene055979:intron | 25.0% |
| ! | GAATGTTTATGTTATCTTTC+TGG | + | chr7.4:15421797-15421816 | MS.gene055979:intron | 25.0% |
| ! | GTTAATATACGAGACAAAAT+TGG | - | chr7.4:15420424-15420443 | None:intergenic | 25.0% |
| ! | TATAAAATCTCGATAATCTG+AGG | - | chr7.4:15420904-15420923 | None:intergenic | 25.0% |
| ! | TATCAATTATAATAGCAACG+AGG | - | chr7.4:15421414-15421433 | None:intergenic | 25.0% |
| ! | TCAGTGTATAAGACTAAATT+GGG | - | chr7.4:15420664-15420683 | None:intergenic | 25.0% |
| ! | TGAGTATTTACTCATTAATC+AGG | - | chr7.4:15420842-15420861 | None:intergenic | 25.0% |
| ! | TTAAATGTTGTTGTGTTGAA+TGG | + | chr7.4:15421561-15421580 | MS.gene055979:intron | 25.0% |
| !! | GTTAGTTTATAAGTTGAGTA+GGG | + | chr7.4:15420622-15420641 | MS.gene055979:intron | 25.0% |
| !! | TGTTAGTTTATAAGTTGAGT+AGG | + | chr7.4:15420621-15420640 | MS.gene055979:intron | 25.0% |
| !!! | GTGAGTTTAGTATTTTTGAT+GGG | + | chr7.4:15420255-15420274 | MS.gene055979:CDS | 25.0% |
| AAGGAAGAATATTGTGATGA+CGG | + | chr7.4:15420127-15420146 | MS.gene055979:CDS | 30.0% | |
| AATTCGTTGTTGAAGGTTAA+TGG | + | chr7.4:15419780-15419799 | MS.gene055979:CDS | 30.0% | |
| ATCCTACAATAAAATGTACC+GGG | - | chr7.4:15420498-15420517 | None:intergenic | 30.0% | |
| ATGTTAGAATACCAATGAAC+CGG | - | chr7.4:15420537-15420556 | None:intergenic | 30.0% | |
| CAATGAGTAAATATCGAAGT+TGG | - | chr7.4:15421296-15421315 | None:intergenic | 30.0% | |
| CATCCTACAATAAAATGTAC+CGG | - | chr7.4:15420499-15420518 | None:intergenic | 30.0% | |
| GATTGGTACTTGAAATTGTA+TGG | + | chr7.4:15420988-15421007 | MS.gene055979:intron | 30.0% | |
| GCAGAATAATGTTAATGTTC+CGG | + | chr7.4:15420031-15420050 | MS.gene055979:CDS | 30.0% | |
| GCATTCTCATCAGAAATATA+CGG | - | chr7.4:15419819-15419838 | None:intergenic | 30.0% | |
| GTCAGTGTATAAGACTAAAT+TGG | - | chr7.4:15420665-15420684 | None:intergenic | 30.0% | |
| TCAATTATAATAGCAACGAG+GGG | - | chr7.4:15421412-15421431 | None:intergenic | 30.0% | |
| ! | AGATATTGATGGATGAGAAT+AGG | + | chr7.4:15420183-15420202 | MS.gene055979:CDS | 30.0% |
| ! | ATTATAGACTATGATGACGT+TGG | + | chr7.4:15420555-15420574 | MS.gene055979:intron | 30.0% |
| ! | GGATTTGTTTGAGATATTGA+TGG | + | chr7.4:15420172-15420191 | MS.gene055979:CDS | 30.0% |
| ! | TAGTATCGAATCTCGATAAT+TGG | - | chr7.4:15421033-15421052 | None:intergenic | 30.0% |
| ! | TGGTTTTCTTATACAGGTAT+GGG | + | chr7.4:15421838-15421857 | MS.gene055979:intron | 30.0% |
| ! | TTATAGACTATGATGACGTT+GGG | + | chr7.4:15420556-15420575 | MS.gene055979:intron | 30.0% |
| !! | ACATTAAGTTGGTAATGATG+TGG | + | chr7.4:15420746-15420765 | MS.gene055979:intron | 30.0% |
| !! | GGTGAGTTTAGTATTTTTGA+TGG | + | chr7.4:15420254-15420273 | MS.gene055979:CDS | 30.0% |
| !! | TTCTAGAATGTTCGTTAGAT+TGG | + | chr7.4:15420689-15420708 | MS.gene055979:intron | 30.0% |
| !! | TTGGTTTTCTTATACAGGTA+TGG | + | chr7.4:15421837-15421856 | MS.gene055979:intron | 30.0% |
| !!! | GCATAATGGTTTATTTTTGC+AGG | + | chr7.4:15421666-15421685 | MS.gene055979:intron | 30.0% |
| !!! | TATGGTTGGTTTTCTTATAC+AGG | + | chr7.4:15421832-15421851 | MS.gene055979:intron | 30.0% |
| AAATCAATCTCACTGTTTCC+TGG | + | chr7.4:15419730-15419749 | MS.gene055979:CDS | 35.0% | |
| AAGAAGAAGGAGAGTAAGAA+GGG | + | chr7.4:15420104-15420123 | MS.gene055979:CDS | 35.0% | |
| AATACTAACCTATCTTCCTC+AGG | - | chr7.4:15421757-15421776 | None:intergenic | 35.0% | |
| AATCAATCTCACTGTTTCCT+GGG | + | chr7.4:15419731-15419750 | MS.gene055979:CDS | 35.0% | |
| ACTTCGGTCTATGGAATTAT+AGG | - | chr7.4:15421366-15421385 | None:intergenic | 35.0% | |
| ATAGTATTCACTTCGGTCTA+TGG | - | chr7.4:15421375-15421394 | None:intergenic | 35.0% | |
| ATCGAATCTCGATAATTGGA+GGG | - | chr7.4:15421029-15421048 | None:intergenic | 35.0% | |
| CAATTATAATAGCAACGAGG+GGG | - | chr7.4:15421411-15421430 | None:intergenic | 35.0% | |
| CTAGTCCTTGCAAATACTAA+GGG | - | chr7.4:15421100-15421119 | None:intergenic | 35.0% | |
| GATGTTAGTTAGATTTGTCC+CGG | + | chr7.4:15420477-15420496 | MS.gene055979:intron | 35.0% | |
| TATCGAATCTCGATAATTGG+AGG | - | chr7.4:15421030-15421049 | None:intergenic | 35.0% | |
| TCCTAGAGAATTCAGACATA+GGG | + | chr7.4:15421186-15421205 | MS.gene055979:intron | 35.0% | |
| TCTAGTCCTTGCAAATACTA+AGG | - | chr7.4:15421101-15421120 | None:intergenic | 35.0% | |
| TGACGGAGAAGTTTAATTGT+CGG | + | chr7.4:15420144-15420163 | MS.gene055979:CDS | 35.0% | |
| TGATAACAGATCCAGACATA+GGG | + | chr7.4:15420811-15420830 | MS.gene055979:intron | 35.0% | |
| TGATACACCTTACAATTTCG+AGG | + | chr7.4:15421269-15421288 | MS.gene055979:intron | 35.0% | |
| TGGTACTTGAAATTGTAAGG+AGG | + | chr7.4:15420865-15420884 | MS.gene055979:intron | 35.0% | |
| TGGTACTTGAAATTGTATGG+TGG | + | chr7.4:15420991-15421010 | MS.gene055979:intron | 35.0% | |
| TGTTAGAATACCAATGAACC+GGG | - | chr7.4:15420536-15420555 | None:intergenic | 35.0% | |
| TTCCTAGAGAATTCAGACAT+AGG | + | chr7.4:15421185-15421204 | MS.gene055979:intron | 35.0% | |
| TTGAAGATGAAAGTCCGATT+GGG | + | chr7.4:15419868-15419887 | MS.gene055979:CDS | 35.0% | |
| ! | GTTGAGTAGGGAAATTTTGT+AGG | + | chr7.4:15420634-15420653 | MS.gene055979:intron | 35.0% |
| ! | TATTGATGGATGAGAATAGG+TGG | + | chr7.4:15420186-15420205 | MS.gene055979:CDS | 35.0% |
| ! | TCTTTTCCTTGGTATTTGCA+AGG | + | chr7.4:15420966-15420985 | MS.gene055979:intron | 35.0% |
| ! | TGAGATTGATTTCATACCCA+GGG | - | chr7.4:15419722-15419741 | None:intergenic | 35.0% |
| ! | TTGATAACAGATCCAGACAT+AGG | + | chr7.4:15420810-15420829 | MS.gene055979:intron | 35.0% |
| !! | GTTGATTTTGGAGAAGGTTA+GGG | + | chr7.4:15419929-15419948 | MS.gene055979:CDS | 35.0% |
| AAGGATGCGATGTTTCAGAA+AGG | + | chr7.4:15419900-15419919 | MS.gene055979:CDS | 40.0% | |
| AAGTCCTTCTGTTAAGAAGG+AGG | + | chr7.4:15420079-15420098 | MS.gene055979:CDS | 40.0% | |
| ACAACAGTAACTCCTGATTC+AGG | - | chr7.4:15421712-15421731 | None:intergenic | 40.0% | |
| ACCAATCCTTGCAAATACCA+AGG | - | chr7.4:15420975-15420994 | None:intergenic | 40.0% | |
| AGGATGCGATGTTTCAGAAA+GGG | + | chr7.4:15419901-15419920 | MS.gene055979:CDS | 40.0% | |
| AGTTGGTCCTCGAAATTGTA+AGG | - | chr7.4:15421279-15421298 | None:intergenic | 40.0% | |
| ATGGATGAGAATAGGTGGAA+GGG | + | chr7.4:15420191-15420210 | MS.gene055979:CDS | 40.0% | |
| CAAAAACAGCACGTATCCTT+TGG | - | chr7.4:15421914-15421933 | None:intergenic | 40.0% | |
| GAAGAAGAAGGAGAGTAAGA+AGG | + | chr7.4:15420103-15420122 | MS.gene055979:CDS | 40.0% | |
| GACGGAGAAGTTTAATTGTC+GGG | + | chr7.4:15420145-15420164 | MS.gene055979:CDS | 40.0% | |
| GATAATTGGAGGGTCTAGAT+TGG | - | chr7.4:15421019-15421038 | None:intergenic | 40.0% | |
| GTCAAGTCCTTCTGTTAAGA+AGG | + | chr7.4:15420076-15420095 | MS.gene055979:CDS | 40.0% | |
| GTGAAGCGAAGGATAATGAA+GGG | + | chr7.4:15419757-15419776 | MS.gene055979:CDS | 40.0% | |
| GTTGAAGATGAAAGTCCGAT+TGG | + | chr7.4:15419867-15419886 | MS.gene055979:CDS | 40.0% | |
| TAAGAAGGAGGAGAAGAAGA+AGG | + | chr7.4:15420091-15420110 | MS.gene055979:CDS | 40.0% | |
| TAATGTTAATGTTCCGGCGA+CGG | + | chr7.4:15420037-15420056 | MS.gene055979:CDS | 40.0% | |
| TAGTCACCAAGAAACGATCT+CGG | - | chr7.4:15421238-15421257 | None:intergenic | 40.0% | |
| TCCCTATGTCTGAATTCTCT+AGG | - | chr7.4:15421190-15421209 | None:intergenic | 40.0% | |
| TCCTTGCAAATACTAAGGGA+GGG | - | chr7.4:15421096-15421115 | None:intergenic | 40.0% | |
| TCCTTGGTATTTGCAAGGAT+TGG | + | chr7.4:15420971-15420990 | MS.gene055979:intron | 40.0% | |
| TGAAGGGAATTCGTTGTTGA+AGG | + | chr7.4:15419773-15419792 | MS.gene055979:CDS | 40.0% | |
| TGATGAGGATCCTGATGTTA+GGG | + | chr7.4:15419839-15419858 | MS.gene055979:CDS | 40.0% | |
| TTAGATTTGTCCCGGTTCAT+TGG | + | chr7.4:15420523-15420542 | MS.gene055979:intron | 40.0% | |
| TTCTCCTCCTTCTTAACAGA+AGG | - | chr7.4:15420086-15420105 | None:intergenic | 40.0% | |
| TTCTGATGAGAATGCTGATG+AGG | + | chr7.4:15419824-15419843 | MS.gene055979:CDS | 40.0% | |
| TTTGGAGAAGGTTAGGGTTT+GGG | + | chr7.4:15419935-15419954 | MS.gene055979:CDS | 40.0% | |
| ! | GAGTAATGCGAGGATTAGTA+AGG | + | chr7.4:15420223-15420242 | MS.gene055979:CDS | 40.0% |
| ! | GTCCCGGTACATTTTATTGT+AGG | + | chr7.4:15420493-15420512 | MS.gene055979:intron | 40.0% |
| ! | GTGAGATTGATTTCATACCC+AGG | - | chr7.4:15419723-15419742 | None:intergenic | 40.0% |
| ! | TAATGCGAGGATTAGTAAGG+AGG | + | chr7.4:15420226-15420245 | MS.gene055979:CDS | 40.0% |
| ! | TTCTTGGTGACTAGGTTGAA+TGG | + | chr7.4:15421245-15421264 | MS.gene055979:intron | 40.0% |
| !! | ATTTTTGATGGGTCTGTCAC+TGG | + | chr7.4:15420266-15420285 | MS.gene055979:CDS | 40.0% |
| !! | GGAGGGAACTTATTTTCCAA+AGG | + | chr7.4:15421895-15421914 | MS.gene055979:CDS | 40.0% |
| !! | GGTTGATTTTGGAGAAGGTT+AGG | + | chr7.4:15419928-15419947 | MS.gene055979:CDS | 40.0% |
| !! | TTCTGGGTGATTTGCTGATA+TGG | + | chr7.4:15421814-15421833 | MS.gene055979:intron | 40.0% |
| !! | TTTTGGAGAAGGTTAGGGTT+TGG | + | chr7.4:15419934-15419953 | MS.gene055979:CDS | 40.0% |
| !!! | ATACGTGCTGTTTTTGGCTT+TGG | + | chr7.4:15421918-15421937 | MS.gene055979:CDS | 40.0% |
| !!! | CAAAGGATACGTGCTGTTTT+TGG | + | chr7.4:15421912-15421931 | MS.gene055979:CDS | 40.0% |
| !!! | GAGTAGTGGTTTTGATGAAG+AGG | - | chr7.4:15419647-15419666 | None:intergenic | 40.0% |
| AAGATGAAAGTCCGATTGGG+AGG | + | chr7.4:15419871-15419890 | MS.gene055979:CDS | 45.0% | |
| AATCTCACTGTTTCCTGGGA+AGG | + | chr7.4:15419735-15419754 | MS.gene055979:CDS | 45.0% | |
| ACCAAGAAACGATCTCGGAA+TGG | - | chr7.4:15421233-15421252 | None:intergenic | 45.0% | |
| ACCATTCCGAGATCGTTTCT+TGG | + | chr7.4:15421229-15421248 | MS.gene055979:intron | 45.0% | |
| ACCTCCAAATCCTCCTTAAC+AGG | - | chr7.4:15419984-15420003 | None:intergenic | 45.0% | |
| ACGGAACTAACGTTCACAAC+TGG | + | chr7.4:15419532-15419551 | MS.gene055979:CDS | 45.0% | |
| AGAAGGAGAGTAAGAAGGGA+AGG | + | chr7.4:15420108-15420127 | MS.gene055979:CDS | 45.0% | |
| AGCAATGTGGAGTTGCAAGA+AGG | + | chr7.4:15420290-15420309 | MS.gene055979:CDS | 45.0% | |
| AGCCTACATCAACATCCGTA+AGG | + | chr7.4:15419686-15419705 | MS.gene055979:CDS | 45.0% | |
| AGCTGATGTCGCATTAATCG+TGG | + | chr7.4:15421446-15421465 | MS.gene055979:intron | 45.0% | |
| ATCAGGTTCATCCCTATGTC+TGG | - | chr7.4:15420825-15420844 | None:intergenic | 45.0% | |
| ATCGTTGAAGAACGTCCAGA+CGG | + | chr7.4:15419513-15419532 | MS.gene055979:CDS | 45.0% | |
| ATTGTGCAGAGGTGGAGATT+CGG | + | chr7.4:15420320-15420339 | MS.gene055979:CDS | 45.0% | |
| CAGGGATAATCTTCCCCTTA+CGG | - | chr7.4:15419704-15419723 | None:intergenic | 45.0% | |
| CCTACATCAACATCCGTAAG+GGG | + | chr7.4:15419688-15419707 | MS.gene055979:CDS | 45.0% | |
| CCTATCTTCCTCAGGTACAT+CGG | - | chr7.4:15421749-15421768 | None:intergenic | 45.0% | |
| CGATGTTTCAGAAAGGGAAG+GGG | + | chr7.4:15419907-15419926 | MS.gene055979:CDS | 45.0% | |
| CGGAGACAAACTGTCTAGAA+TGG | + | chr7.4:15419562-15419581 | MS.gene055979:CDS | 45.0% | |
| CTAACGTTCACAACTGGTAC+TGG | + | chr7.4:15419538-15419557 | MS.gene055979:CDS | 45.0% | |
| CTGATGAGGATCCTGATGTT+AGG | + | chr7.4:15419838-15419857 | MS.gene055979:CDS | 45.0% | |
| GAAGTTTAATTGTCGGGCGA+AGG | + | chr7.4:15420151-15420170 | MS.gene055979:CDS | 45.0% | |
| GATGGATGAGAATAGGTGGA+AGG | + | chr7.4:15420190-15420209 | MS.gene055979:CDS | 45.0% | |
| GCAATGTGGAGTTGCAAGAA+GGG | + | chr7.4:15420291-15420310 | MS.gene055979:CDS | 45.0% | |
| GCCTACATCAACATCCGTAA+GGG | + | chr7.4:15419687-15419706 | MS.gene055979:CDS | 45.0% | |
| GCGATGTTTCAGAAAGGGAA+GGG | + | chr7.4:15419906-15419925 | MS.gene055979:CDS | 45.0% | |
| GGATCCTGATGTTAGGGTTA+CGG | + | chr7.4:15419845-15419864 | MS.gene055979:CDS | 45.0% | |
| GGATTTGGAGGTTAAGAAGC+CGG | + | chr7.4:15419992-15420011 | MS.gene055979:CDS | 45.0% | |
| GGTGAAGCGAAGGATAATGA+AGG | + | chr7.4:15419756-15419775 | MS.gene055979:CDS | 45.0% | |
| GTAAGGGGAAGATTATCCCT+GGG | + | chr7.4:15419703-15419722 | MS.gene055979:CDS | 45.0% | |
| GTCCTTGCAAATACTAAGGG+AGG | - | chr7.4:15421097-15421116 | None:intergenic | 45.0% | |
| TCAACCGTAACCCTAACATC+AGG | - | chr7.4:15419852-15419871 | None:intergenic | 45.0% | |
| TCCAATCTCACCATCCTCAA+CGG | + | chr7.4:15419612-15419631 | MS.gene055979:CDS | 45.0% | |
| TCCCTCCCTTAGTATTTGCA+AGG | + | chr7.4:15421092-15421111 | MS.gene055979:intron | 45.0% | |
| TCCTGTTAAGGAGGATTTGG+AGG | + | chr7.4:15419980-15419999 | MS.gene055979:CDS | 45.0% | |
| TCCTTAATCCTCCTCCCAAT+CGG | - | chr7.4:15419885-15419904 | None:intergenic | 45.0% | |
| TGCGATGTTTCAGAAAGGGA+AGG | + | chr7.4:15419905-15419924 | MS.gene055979:CDS | 45.0% | |
| TGGTCCTGTTAAGGAGGATT+TGG | + | chr7.4:15419977-15419996 | MS.gene055979:CDS | 45.0% | |
| TTGTGAACGTTAGTTCCGTC+TGG | - | chr7.4:15419531-15419550 | None:intergenic | 45.0% | |
| ! | AAGGGAAGTTGATTGTGCAG+AGG | + | chr7.4:15420309-15420328 | MS.gene055979:CDS | 45.0% |
| ! | AGACTATGATGACGTTGGGT+TGG | + | chr7.4:15420560-15420579 | MS.gene055979:intron | 45.0% |
| ! | AGGATTAGTAAGGAGGTTGG+GGG | + | chr7.4:15420233-15420252 | MS.gene055979:CDS | 45.0% |
| ! | CGAGGATTAGTAAGGAGGTT+GGG | + | chr7.4:15420231-15420250 | MS.gene055979:CDS | 45.0% |
| ! | GAGATCGTTTCTTGGTGACT+AGG | + | chr7.4:15421237-15421256 | MS.gene055979:intron | 45.0% |
| ! | GAGGATTAGTAAGGAGGTTG+GGG | + | chr7.4:15420232-15420251 | MS.gene055979:CDS | 45.0% |
| ! | GTTTTACGCAGAGTAATGCG+AGG | + | chr7.4:15420213-15420232 | MS.gene055979:CDS | 45.0% |
| ! | TGTGGTGGAGAACACTGAAA+GGG | + | chr7.4:15421869-15421888 | MS.gene055979:CDS | 45.0% |
| !! | GAAAGGGAAGGGGTTGATTT+TGG | + | chr7.4:15419917-15419936 | MS.gene055979:CDS | 45.0% |
| !! | GAAGGGGTTGATTTTGGAGA+AGG | + | chr7.4:15419923-15419942 | MS.gene055979:CDS | 45.0% |
| !! | GATGACGTTGGGTTGGTATT+CGG | + | chr7.4:15420567-15420586 | MS.gene055979:intron | 45.0% |
| !! | GATTGATGGTGCTCAATCTC+AGG | + | chr7.4:15420349-15420368 | MS.gene055979:CDS | 45.0% |
| !! | GGGTGATTTGCTGATATGGT+TGG | + | chr7.4:15421818-15421837 | MS.gene055979:intron | 45.0% |
| !! | TAGGGTTTGGGTTGAGAGTA+TGG | + | chr7.4:15419947-15419966 | MS.gene055979:CDS | 45.0% |
| !! | TGGGTTGGTATTCGGTAATG+TGG | + | chr7.4:15420575-15420594 | MS.gene055979:intron | 45.0% |
| !!! | TTAATTTTTTACAATTTTAA+AGG | + | chr7.4:15421317-15421336 | MS.gene055979:intron | 5.0% |
| ACGGCGAAGGTGATAAACGA+TGG | + | chr7.4:15419490-15419509 | MS.gene055979:CDS | 50.0% | |
| AGAACACTGAAAGGGGATGG+AGG | + | chr7.4:15421877-15421896 | MS.gene055979:CDS | 50.0% | |
| AGATTCGGGAGCTGGATTGA+TGG | + | chr7.4:15420335-15420354 | MS.gene055979:CDS | 50.0% | |
| ATGAAAGTCCGATTGGGAGG+AGG | + | chr7.4:15419874-15419893 | MS.gene055979:CDS | 50.0% | |
| CAGGTACATCGGTATGTGTC+AGG | - | chr7.4:15421738-15421757 | None:intergenic | 50.0% | |
| CAGGTATGGGAATGCTACTG+TGG | + | chr7.4:15421851-15421870 | MS.gene055979:intron | 50.0% | |
| CCCCTTACGGATGTTGATGT+AGG | - | chr7.4:15419691-15419710 | None:intergenic | 50.0% | |
| CCGATGTACCTGAGGAAGAT+AGG | + | chr7.4:15421746-15421765 | MS.gene055979:CDS | 50.0% | |
| CGTAAGGGGAAGATTATCCC+TGG | + | chr7.4:15419702-15419721 | MS.gene055979:CDS | 50.0% | |
| GAACACTGAAAGGGGATGGA+GGG | + | chr7.4:15421878-15421897 | MS.gene055979:CDS | 50.0% | |
| GACACATACCGATGTACCTG+AGG | + | chr7.4:15421738-15421757 | MS.gene055979:CDS | 50.0% | |
| GATGTTGATGTAGGCTTCGC+CGG | - | chr7.4:15419682-15419701 | None:intergenic | 50.0% | |
| GGATGGTGAGATTGGAGAGA+AGG | - | chr7.4:15419608-15419627 | None:intergenic | 50.0% | |
| GGTGAGATTGGAGAGAAGGT+TGG | - | chr7.4:15419604-15419623 | None:intergenic | 50.0% | |
| GGTGCTCAATCTCAGGTATG+TGG | + | chr7.4:15420356-15420375 | MS.gene055979:intron | 50.0% | |
| GTATGGGAATGCTACTGTGG+TGG | + | chr7.4:15421854-15421873 | MS.gene055979:CDS | 50.0% | |
| GTCTGTCACTGGAAGCAATG+TGG | + | chr7.4:15420277-15420296 | MS.gene055979:CDS | 50.0% | |
| TCCGATTGGGAGGAGGATTA+AGG | + | chr7.4:15419881-15419900 | MS.gene055979:CDS | 50.0% | |
| TGGAGAACACTGAAAGGGGA+TGG | + | chr7.4:15421874-15421893 | MS.gene055979:CDS | 50.0% | |
| TTGTGCAGAGGTGGAGATTC+GGG | + | chr7.4:15420321-15420340 | MS.gene055979:CDS | 50.0% | |
| TTTGGAGGTTAAGAAGCCGG+CGG | + | chr7.4:15419995-15420014 | MS.gene055979:CDS | 50.0% | |
| ! | CTGTGGTGGAGAACACTGAA+AGG | + | chr7.4:15421868-15421887 | MS.gene055979:CDS | 50.0% |
| ! | GCGAGGATTAGTAAGGAGGT+TGG | + | chr7.4:15420230-15420249 | MS.gene055979:CDS | 50.0% |
| ! | GGAAGTTGATTGTGCAGAGG+TGG | + | chr7.4:15420312-15420331 | MS.gene055979:CDS | 50.0% |
| ! | GTGGTGGAGAACACTGAAAG+GGG | + | chr7.4:15421870-15421889 | MS.gene055979:CDS | 50.0% |
| !! | CGTTCACAACTGGTACTGGT+CGG | + | chr7.4:15419542-15419561 | MS.gene055979:CDS | 50.0% |
| !! | GCAGGTGAGACTTGTTTTCG+AGG | + | chr7.4:15421684-15421703 | MS.gene055979:intron | 50.0% |
| !! | GGAGAGAAGGTTGGTGAAGA+AGG | - | chr7.4:15419595-15419614 | None:intergenic | 50.0% |
| !! | GTTTTCGAGGAGCCTGAATC+AGG | + | chr7.4:15421697-15421716 | MS.gene055979:CDS | 50.0% |
| ACTACTCTCCGTAGCCTCAC+CGG | + | chr7.4:15419660-15419679 | MS.gene055979:CDS | 55.0% | |
| AGAGGTTACCTTCGCCGTTG+AGG | - | chr7.4:15419629-15419648 | None:intergenic | 55.0% | |
| ATCCTTCGCTTCACCTTCCC+AGG | - | chr7.4:15419751-15419770 | None:intergenic | 55.0% | |
| GAGAGGTGGTCCTGTTAAGG+AGG | + | chr7.4:15419971-15419990 | MS.gene055979:CDS | 55.0% | |
| GCCGTTGAGGATGGTGAGAT+TGG | - | chr7.4:15419616-15419635 | None:intergenic | 55.0% | |
| GTTACCTTCGCCGTTGAGGA+TGG | - | chr7.4:15419625-15419644 | None:intergenic | 55.0% | |
| TTCCTGGGAAGGTGAAGCGA+AGG | + | chr7.4:15419746-15419765 | MS.gene055979:CDS | 55.0% | |
| ! | GTTGAGAGTATGGCGAGAGG+TGG | + | chr7.4:15419957-15419976 | MS.gene055979:CDS | 55.0% |
| ! | TGGGTTGAGAGTATGGCGAG+AGG | + | chr7.4:15419954-15419973 | MS.gene055979:CDS | 55.0% |
| AGAGGTGGAGATTCGGGAGC+TGG | + | chr7.4:15420327-15420346 | MS.gene055979:CDS | 60.0% | |
| CTCACCATCCTCAACGGCGA+AGG | + | chr7.4:15419618-15419637 | MS.gene055979:CDS | 60.0% | |
| GCTGTTGTTGTCACCGTCGC+CGG | - | chr7.4:15420053-15420072 | None:intergenic | 60.0% | |
| GGCGAGAGGTGGTCCTGTTA+AGG | + | chr7.4:15419968-15419987 | MS.gene055979:CDS | 60.0% | |
| GGTGAGGCTACGGAGAGTAG+TGG | - | chr7.4:15419661-15419680 | None:intergenic | 60.0% | |
| TGATGTAGGCTTCGCCGGTG+AGG | - | chr7.4:15419677-15419696 | None:intergenic | 60.0% | |
| AGGCTTCGCCGGTGAGGCTA+CGG | - | chr7.4:15419671-15419690 | None:intergenic | 65.0% | |
| GGTTAAGAAGCCGGCGGCTC+AGG | + | chr7.4:15420001-15420020 | MS.gene055979:CDS | 65.0% | |
| TGCTTCACTGCCTGAGCCGC+CGG | - | chr7.4:15420014-15420033 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 15419480 | 15421947 | 15419480 | ID=MS.gene055979 |
| chr7.4 | mRNA | 15419480 | 15421947 | 15419480 | ID=MS.gene055979.t1;Parent=MS.gene055979 |
| chr7.4 | exon | 15419480 | 15420370 | 15419480 | ID=MS.gene055979.t1.exon1;Parent=MS.gene055979.t1 |
| chr7.4 | CDS | 15419480 | 15420370 | 15419480 | ID=cds.MS.gene055979.t1;Parent=MS.gene055979.t1 |
| chr7.4 | exon | 15421688 | 15421767 | 15421688 | ID=MS.gene055979.t1.exon2;Parent=MS.gene055979.t1 |
| chr7.4 | CDS | 15421688 | 15421767 | 15421688 | ID=cds.MS.gene055979.t1;Parent=MS.gene055979.t1 |
| chr7.4 | exon | 15421854 | 15421947 | 15421854 | ID=MS.gene055979.t1.exon3;Parent=MS.gene055979.t1 |
| chr7.4 | CDS | 15421854 | 15421947 | 15421854 | ID=cds.MS.gene055979.t1;Parent=MS.gene055979.t1 |
| Gene Sequence |
| Protein sequence |
