AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75187


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 134 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGGTGTCTCTTCATTTC+TGG 0.080261 1.3:-75317834 MS.gene75187:intron
TGCATAGATGATTGCTTTAA+AGG 0.165421 1.3:-75317736 MS.gene75187:CDS
TGCAAATCAATTAAAGAAAA+TGG 0.219753 1.3:-75318661 MS.gene75187:CDS
ACCAGTATCTATGCTCCTTT+TGG 0.248004 1.3:-75316979 MS.gene75187:CDS
TTGTTGAAGCTTCCTGCTTC+TGG 0.303506 1.3:-75318472 MS.gene75187:CDS
TCAGGTGTCTCTTCATTTCT+GGG 0.315570 1.3:-75317833 MS.gene75187:intron
GAGTTACTCTGTTGGGTTCA+TGG 0.318367 1.3:-75316706 MS.gene75187:CDS
TAAAGTTATAACCACTTCTA+TGG 0.321812 1.3:-75318695 MS.gene75187:CDS
AAAATATTCTTCATTGTTGT+TGG 0.346316 1.3:-75318302 MS.gene75187:CDS
TCTCTTCATTTCTGGGGTAC+TGG 0.358919 1.3:-75317826 MS.gene75187:CDS
GAGCAATACTTGTCATTTCC+AGG 0.362820 1.3:+75315599 None:intergenic
AGTTCCATCCACGTTCTCTT+TGG 0.366087 1.3:+75315646 None:intergenic
TCATTAACTCTCTTGAGCTT+TGG 0.367280 1.3:-75317175 MS.gene75187:CDS
ACAAAACAATGGAGGACTTA+TGG 0.370348 1.3:-75318415 MS.gene75187:CDS
AGACAAAGCATAAAACAAAA+AGG 0.374855 1.3:-75315250 MS.gene75187:CDS
CTGTCCTAAAAGCCCTCATC+AGG 0.374975 1.3:+75318617 None:intergenic
GATGATGCCGCAGGATCATT+AGG 0.378915 1.3:+75316430 None:intergenic
CACTGTGGAGTTACTCTGTT+GGG 0.380617 1.3:-75316713 MS.gene75187:CDS
CAAGGTAGGACTTCACAATA+TGG 0.381844 1.3:+75318392 None:intergenic
AAAATTTCCAGTGTTCTTGT+TGG 0.383029 1.3:-75315740 MS.gene75187:intron
GTACCTTGATATATTTCCTT+AGG 0.386131 1.3:+75318263 None:intergenic
CGGCTAGGTACTTTCCCCTT+AGG 0.413546 1.3:-75317055 MS.gene75187:CDS
CATTTCTGGGGTACTGGTGG+AGG 0.417756 1.3:-75317820 MS.gene75187:CDS
CTTTGCCAATGCCTCCTGTA+GGG 0.419106 1.3:+75316925 None:intergenic
TCTTCGAAACCTTTCAACTT+TGG 0.426560 1.3:+75316635 None:intergenic
GTTTCACAGCATTTACGAAA+TGG 0.429053 1.3:+75317686 None:intergenic
GCAGAAGGGCTGTCGCTTGA+AGG 0.432094 1.3:+75315323 None:intergenic
AACTGCGTCATTGAACTTCT+CGG 0.432785 1.3:-75317640 MS.gene75187:CDS
GTTGACTGTACTTAATGAAA+TGG 0.436589 1.3:-75318512 MS.gene75187:CDS
GCAAATCAATTAAAGAAAAT+GGG 0.446925 1.3:-75318660 MS.gene75187:CDS
CCCTTAGGTTGAGATGTATC+CGG 0.448152 1.3:-75317040 MS.gene75187:CDS
TAGATACTGGTACAAAAGAA+TGG 0.450220 1.3:+75316991 None:intergenic
TTTAGGACAGCATGCCACTA+TGG 0.450538 1.3:-75318604 MS.gene75187:CDS
TCACTGAACTTAAGCAGATC+CGG 0.454118 1.3:+75319849 None:intergenic
TGATTTACGCAGCATATTGA+AGG 0.459394 1.3:-75316898 MS.gene75187:intron
TTGTGCATCTGTATTGGATC+TGG 0.460491 1.3:-75317760 MS.gene75187:CDS
TTTAGCTCATCCTGGTTACC+TGG 0.468220 1.3:-75315617 MS.gene75187:CDS
CAGCAATCTGGTTCAACATC+CGG 0.468912 1.3:+75317021 None:intergenic
CGCAGGATCATTAGGTAGAA+AGG 0.471731 1.3:+75316438 None:intergenic
TCAAGCGACAGCCCTTCTGC+CGG 0.472007 1.3:-75315320 MS.gene75187:CDS
AGGAATAAATCTCACACCTA+AGG 0.472641 1.3:-75315221 None:intergenic
AAGTTGCGCAACCTCACAAT+TGG 0.474304 1.3:+75316669 None:intergenic
TCCAAAAGGAGCATAGATAC+TGG 0.475479 1.3:+75316978 None:intergenic
CCACTTCTATGGTTGATTTG+TGG 0.479032 1.3:-75318684 MS.gene75187:CDS
CTTGTCATTTCCAGGTAACC+AGG 0.479894 1.3:+75315607 None:intergenic
CTTCATTTCTGGGGTACTGG+TGG 0.480769 1.3:-75317823 MS.gene75187:CDS
TGCGGTTCGTTCCCTGATGA+GGG 0.483874 1.3:-75318629 MS.gene75187:CDS
ATGAATAGACACGAAACAAC+AGG 0.485209 1.3:+75317790 None:intergenic
AATGGGTAGAAGCAGCAATC+TGG 0.490303 1.3:+75317009 None:intergenic
TGATGATGTTGTGGAGGACT+TGG 0.492880 1.3:-75315375 MS.gene75187:CDS
TGGAAGAAAAGAGATCATAA+TGG 0.493687 1.3:-75318449 MS.gene75187:CDS
ATGCGGTTCGTTCCCTGATG+AGG 0.495163 1.3:-75318630 MS.gene75187:CDS
AAGTGCATCCCTTAAAATCA+TGG 0.500234 1.3:+75317564 None:intergenic
AGAGAGTTGTGCATCTGTAT+TGG 0.501253 1.3:-75317766 MS.gene75187:CDS
CAAGCGACAGCCCTTCTGCC+GGG 0.504148 1.3:-75315319 MS.gene75187:CDS
GCTCCTAAGGAAATATATCA+AGG 0.505109 1.3:-75318266 MS.gene75187:intron
TCCGGATACATCTCAACCTA+AGG 0.506348 1.3:+75317039 None:intergenic
CTGCTGCATTTAGCTCATCC+TGG 0.510196 1.3:-75315625 MS.gene75187:CDS
GCAAATTGACCAAAGTTGAA+AGG 0.512230 1.3:-75316644 MS.gene75187:CDS
ACGACTCATTAAAGGAATCC+AGG 0.512258 1.3:-75315851 MS.gene75187:intron
TTGAAGCTTCCTGCTTCTGG+TGG 0.513192 1.3:-75318469 MS.gene75187:CDS
CAACAGCCTACTGAACCAAA+AGG 0.514963 1.3:-75315437 MS.gene75187:CDS
AGATACTGGTACAAAAGAAT+GGG 0.517124 1.3:+75316992 None:intergenic
CTCCACAACATCATCATCAA+TGG 0.522343 1.3:+75315382 None:intergenic
TTCTGTGGTTGAAGAACTTG+CGG 0.526193 1.3:-75316745 MS.gene75187:CDS
GTGGATGATGACATGGAAGA+TGG 0.527004 1.3:-75318784 MS.gene75187:CDS
CAGAGTAACTCCACAGTGCT+AGG 0.529878 1.3:+75316718 None:intergenic
AATGCCCGTGTCTTAAGAGT+TGG 0.530371 1.3:+75316786 None:intergenic
GAAATGGCAATTCAAAACAT+AGG 0.534559 1.3:+75317702 None:intergenic
TTTGCCAATGCCTCCTGTAG+GGG 0.535188 1.3:+75316926 None:intergenic
CAGTCATTTGATTCAAAATG+TGG 0.535572 1.3:+75318359 None:intergenic
GGAGGATACTAAAGAGAATG+AGG 0.540305 1.3:-75315672 MS.gene75187:CDS
CAGGTGTCTCTTCATTTCTG+GGG 0.543367 1.3:-75317832 MS.gene75187:CDS
GCTTTGCCAATGCCTCCTGT+AGG 0.545538 1.3:+75316924 None:intergenic
GCACTGTGGAGTTACTCTGT+TGG 0.548474 1.3:-75316714 MS.gene75187:CDS
GATTGAAGCAAAGCAACATA+AGG 0.549356 1.3:-75320548 MS.gene75187:CDS
ATATATTTCCTTAGGAGCGA+AGG 0.556004 1.3:+75318271 None:intergenic
TCTCATCATCATCACCATAG+TGG 0.557196 1.3:+75318590 None:intergenic
CACTGAACTTAAGCAGATCC+GGG 0.560310 1.3:+75319850 None:intergenic
TGATATCATTTACTTTACAT+CGG 0.560340 1.3:-75318327 MS.gene75187:CDS
TCATCTCCAGCATATCCAAA+AGG 0.562573 1.3:+75316964 None:intergenic
CCGGATACATCTCAACCTAA+GGG 0.564014 1.3:+75317040 None:intergenic
TTGCCAATGCCTCCTGTAGG+GGG 0.564018 1.3:+75316927 None:intergenic
CCTAGCCGTGGGAACTAGAC+GGG 0.565672 1.3:+75317070 None:intergenic
ATATTAGAGATTAATGTGGA+TGG 0.567480 1.3:-75320616 None:intergenic
CTACTGAACCAAAAGGAAAG+AGG 0.572500 1.3:-75315430 MS.gene75187:CDS
TGCCATTGATGATGATGTTG+TGG 0.573586 1.3:-75315384 MS.gene75187:CDS
GGAATAAATCTCACACCTAA+GGG 0.576466 1.3:-75315220 None:intergenic
GATGCCAAAGAGAACGTGGA+TGG 0.579919 1.3:-75315650 MS.gene75187:CDS
AAAGGTTTCGAAGAGAAATG+AGG 0.583015 1.3:-75316626 MS.gene75187:CDS
ACTGTACTTAATGAAATGGA+TGG 0.588834 1.3:-75318508 MS.gene75187:CDS
TAAGACACGGGCATTTCAAG+AGG 0.589841 1.3:-75316778 MS.gene75187:CDS
CTTTGCTTCAATCACAACCG+TGG 0.591835 1.3:+75320558 None:intergenic
AAATGTGGAGAGCATTTCCA+AGG 0.591878 1.3:+75318374 None:intergenic
CATGGAAGATGGAGAACCAC+AGG 0.594124 1.3:-75318773 MS.gene75187:CDS
GATTATATTAGAGATTAATG+TGG 0.595537 1.3:-75320620 None:intergenic
CATATTGTGAAGTCCTACCT+TGG 0.595814 1.3:-75318391 MS.gene75187:CDS
TCAAGAAAAGATGATGCCGC+AGG 0.596185 1.3:+75316421 None:intergenic
CCACAAATCAACCATAGAAG+TGG 0.600691 1.3:+75318684 None:intergenic
TGAGAAGGCTATTGAGCATG+AGG 0.603012 1.3:-75318746 MS.gene75187:CDS
CTTTCTACCTAATGATCCTG+CGG 0.603597 1.3:-75316437 MS.gene75187:CDS
GTGGAGAGCATTTCCAAGGT+AGG 0.605480 1.3:+75318378 None:intergenic
TGAGCATGAGGTTCAAGCAA+AGG 0.611999 1.3:-75318734 MS.gene75187:CDS
AGAACCACAGGTAGATGAGA+AGG 0.612954 1.3:-75318761 MS.gene75187:CDS
ATACTTTGATAGTGCACTAG+AGG 0.618108 1.3:+75315908 None:intergenic
ACCTAGCCGTGGGAACTAGA+CGG 0.618655 1.3:+75317069 None:intergenic
ATAGCCTTCTCATCTACCTG+TGG 0.620098 1.3:+75318757 None:intergenic
AGAATCAGCAAGTGATGAGG+AGG 0.621827 1.3:-75315690 MS.gene75187:CDS
GCAAGCCAACTCTTAAGACA+CGG 0.624117 1.3:-75316791 MS.gene75187:CDS
CAACTGTCGAATGAAAATGA+AGG 0.625145 1.3:+75317588 None:intergenic
TGAAGAATCAGCAAGTGATG+AGG 0.631498 1.3:-75315693 MS.gene75187:CDS
CGTCATTGAACTTCTCGGAG+TGG 0.634980 1.3:-75317635 MS.gene75187:CDS
CCCGTCTAGTTCCCACGGCT+AGG 0.635585 1.3:-75317070 MS.gene75187:CDS
ATTTGATGACTACAAAACAA+TGG 0.635609 1.3:-75318426 MS.gene75187:CDS
AAGGGGAAAGTACCTAGCCG+TGG 0.636588 1.3:+75317058 None:intergenic
AAGGCGTGTTGATATGCAGT+CGG 0.638450 1.3:+75317607 None:intergenic
GGAAGATGTGGATGATGACA+TGG 0.639734 1.3:-75318791 MS.gene75187:CDS
CAGATTGTGAACTATAAGCA+CGG 0.640362 1.3:+75317141 None:intergenic
TGAGGATGCCAAAGAGAACG+TGG 0.646565 1.3:-75315654 MS.gene75187:CDS
AGGGGAAAGTACCTAGCCGT+GGG 0.649443 1.3:+75317059 None:intergenic
AGAAAATGGGAGCTTAAATG+CGG 0.652168 1.3:-75318647 MS.gene75187:CDS
CAAGCCAACTCTTAAGACAC+GGG 0.654132 1.3:-75316790 MS.gene75187:CDS
AGTAGCCCGTCTAGTTCCCA+CGG 0.654607 1.3:-75317075 MS.gene75187:CDS
AATAGAAAATCTTCAGCACA+AGG 0.655625 1.3:-75320521 MS.gene75187:intron
TAGACACGAAACAACAGGAA+GGG 0.657156 1.3:+75317795 None:intergenic
CGGATACATCTCAACCTAAG+GGG 0.658910 1.3:+75317041 None:intergenic
CATTGATGATGATGTTGTGG+AGG 0.661802 1.3:-75315381 MS.gene75187:CDS
AATGAGGCAGCTTATTCGCG+AGG 0.672768 1.3:-75316610 MS.gene75187:intron
AGATGAATGATGATCAACAT+CGG 0.678740 1.3:+75315289 None:intergenic
TGTCCTAAAAGCCCTCATCA+GGG 0.678828 1.3:+75318618 None:intergenic
GTACTTGAAAGAGAATGACC+CGG 0.684135 1.3:-75319868 MS.gene75187:CDS
TGATGACTACAAAACAATGG+AGG 0.690281 1.3:-75318423 MS.gene75187:CDS
ATAGACACGAAACAACAGGA+AGG 0.702686 1.3:+75317794 None:intergenic
TTGCGGAACACCTAGCACTG+TGG 0.724336 1.3:-75316728 MS.gene75187:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACCTTTTATATATTTAT+TGG - chr1.3:75315879-75315898 MS.gene75187:CDS 10.0%
!!! TTACCTTTTATATATTTATT+GGG - chr1.3:75315880-75315899 MS.gene75187:CDS 10.0%
!!! TTTTTGACAATTTTATTTTA+TGG - chr1.3:75318564-75318583 MS.gene75187:CDS 10.0%
!! AAAAAAGGAAAAAGAAATAT+TGG + chr1.3:75316299-75316318 None:intergenic 15.0%
!! AAAAAGGAAAAAGAAATATT+GGG + chr1.3:75316298-75316317 None:intergenic 15.0%
!! AAAATTAAATTTGTAGTGAT+TGG + chr1.3:75316564-75316583 None:intergenic 15.0%
!! AAACTTATATTTAGCTATTA+AGG + chr1.3:75315663-75315682 None:intergenic 15.0%
!! AAATTAAGAATAGTATCATT+CGG - chr1.3:75317821-75317840 MS.gene75187:CDS 15.0%
!! CACTTGATATAATAAAATAA+AGG + chr1.3:75319782-75319801 None:intergenic 15.0%
!! TAAAATAAAGGAAAAGAAAA+TGG + chr1.3:75319770-75319789 None:intergenic 15.0%
!! TACAATTCTCAAATATAAAT+GGG + chr1.3:75319865-75319884 None:intergenic 15.0%
!! TGATAAAAGTAAAACATAAA+AGG + chr1.3:75319271-75319290 None:intergenic 15.0%
!! TTACAATTCTCAAATATAAA+TGG + chr1.3:75319866-75319885 None:intergenic 15.0%
!!! AAATTTTCTATCTTGATTAA+AGG + chr1.3:75316751-75316770 None:intergenic 15.0%
!!! TTAATCAAGATAGAAAATTT+TGG - chr1.3:75316751-75316770 MS.gene75187:CDS 15.0%
!!! TTATGTTTTACTTTTATCAT+TGG - chr1.3:75319272-75319291 MS.gene75187:intron 15.0%
!! AAAATATTCTTCATTGTTGT+TGG - chr1.3:75317530-75317549 MS.gene75187:intron 20.0%
!! AACAATGTAATGTAATGTAA+TGG + chr1.3:75315343-75315362 None:intergenic 20.0%
!! ACAATGTAATGTAATGTAAT+GGG + chr1.3:75315342-75315361 None:intergenic 20.0%
!! ATAAAACAAAAAGGTTGAAA+AGG - chr1.3:75320591-75320610 MS.gene75187:CDS 20.0%
!! GCAAATCAATTAAAGAAAAT+GGG - chr1.3:75317172-75317191 MS.gene75187:CDS 20.0%
!! TACATTAATTGAGATGAATA+TGG - chr1.3:75316071-75316090 MS.gene75187:intron 20.0%
!! TAGCCCAATAAATATATAAA+AGG + chr1.3:75315886-75315905 None:intergenic 20.0%
!! TATAGAAGTTTATTTGCTTA+AGG + chr1.3:75319602-75319621 None:intergenic 20.0%
!! TATATAACATAACAGCAAAA+AGG + chr1.3:75316840-75316859 None:intergenic 20.0%
!! TGATATCATTTACTTTACAT+CGG - chr1.3:75317505-75317524 MS.gene75187:intron 20.0%
!! TGATTAAAAAGCTTAATAGA+TGG - chr1.3:75317731-75317750 MS.gene75187:CDS 20.0%
!! TGCAAATCAATTAAAGAAAA+TGG - chr1.3:75317171-75317190 MS.gene75187:CDS 20.0%
!! TTAACATATGTCTATTCATT+TGG - chr1.3:75317952-75317971 MS.gene75187:intron 20.0%
!! TTAAGCAAATAAACTTCTAT+AGG - chr1.3:75319601-75319620 MS.gene75187:intron 20.0%
!!! AACTAAATTTTTCTGAAATC+TGG - chr1.3:75317763-75317782 MS.gene75187:CDS 20.0%
!!! ACTTTTGTTTGTTTTGTATT+AGG - chr1.3:75316234-75316253 MS.gene75187:intron 20.0%
!!! GCTATTAAGTTATTTCATTT+TGG - chr1.3:75319665-75319684 MS.gene75187:intron 20.0%
!!! TTCTTTTTACTTTTTATCTG+AGG - chr1.3:75320349-75320368 MS.gene75187:intron 20.0%
!!! TTGTATTTTTTTAGACCTAT+AGG - chr1.3:75316597-75316616 MS.gene75187:intron 20.0%
!!! TTTTTGCTGTTATGTTATAT+AGG - chr1.3:75316839-75316858 MS.gene75187:intron 20.0%
! AAACAAGACAGATATTAGAT+AGG + chr1.3:75316043-75316062 None:intergenic 25.0%
! ACAAAAAAACGACTCATTAA+AGG - chr1.3:75319973-75319992 MS.gene75187:intron 25.0%
! ACTTTCTTGTTGAAATTATC+AGG - chr1.3:75317981-75318000 MS.gene75187:intron 25.0%
! AGACAAAGCATAAAACAAAA+AGG - chr1.3:75320582-75320601 MS.gene75187:CDS 25.0%
! ATCTCATTAGTAATGAGTAA+AGG - chr1.3:75318456-75318475 MS.gene75187:CDS 25.0%
! ATTAAATTTGTAGTGATTGG+TGG + chr1.3:75316561-75316580 None:intergenic 25.0%
! ATTTAGTAATGCATGCAAAT+AGG + chr1.3:75316956-75316975 None:intergenic 25.0%
! CGAATAAAACAAATCTATCA+AGG + chr1.3:75318499-75318518 None:intergenic 25.0%
! CTAAAAGATTTATAGCCTAT+AGG + chr1.3:75316615-75316634 None:intergenic 25.0%
! TAAAGTTATAACCACTTCTA+TGG - chr1.3:75317137-75317156 MS.gene75187:CDS 25.0%
! TACCAATAATGAACACAAAA+TGG + chr1.3:75316536-75316555 None:intergenic 25.0%
! TACTCATTACTAATGAGATA+CGG + chr1.3:75318455-75318474 None:intergenic 25.0%
! TATGCAAGAATACCTTTAAA+AGG + chr1.3:75319013-75319032 None:intergenic 25.0%
! TGCACTTAATACAAAAACTA+AGG - chr1.3:75318284-75318303 MS.gene75187:CDS 25.0%
! TTAAATTTGTAGTGATTGGT+GGG + chr1.3:75316560-75316579 None:intergenic 25.0%
!! AAGAATACCTTTAAAAGGTT+AGG + chr1.3:75319008-75319027 None:intergenic 25.0%
!! AAGGAAAAAAGTTTTTATGC+AGG + chr1.3:75319583-75319602 None:intergenic 25.0%
!! ATTTGATGACTACAAAACAA+TGG - chr1.3:75317406-75317425 MS.gene75187:intron 25.0%
!! CTATAGGCTATAAATCTTTT+AGG - chr1.3:75316613-75316632 MS.gene75187:CDS 25.0%
!! GTGAATTTAAAATTCAAACC+TGG + chr1.3:75320002-75320021 None:intergenic 25.0%
!! TTCCATTTTGTGTTCATTAT+TGG - chr1.3:75316531-75316550 MS.gene75187:intron 25.0%
!! TTCTTAATTTTGTTCGAGTA+CGG + chr1.3:75317811-75317830 None:intergenic 25.0%
!! TTTAAAGTAAAGTGACATTG+AGG + chr1.3:75319835-75319854 None:intergenic 25.0%
!!! AATCTTTTAGGTTAAGGTTA+TGG - chr1.3:75316625-75316644 MS.gene75187:CDS 25.0%
!!! AGAATTTTTTTCCCATATCT+AGG + chr1.3:75316171-75316190 None:intergenic 25.0%
!!! AGATTTTCTCTTTACTTTTG+AGG - chr1.3:75319443-75319462 MS.gene75187:intron 25.0%
!!! CATTAGTACTTTAAAGTTTG+TGG - chr1.3:75317644-75317663 MS.gene75187:CDS 25.0%
!!! CTTTTTCGGATGAAAAAAAA+AGG + chr1.3:75316314-75316333 None:intergenic 25.0%
!!! CTTTTTTTTTCATCCGAAAA+AGG - chr1.3:75316312-75316331 MS.gene75187:intron 25.0%
!!! GCTATAAATCTTTTAGGTTA+AGG - chr1.3:75316619-75316638 MS.gene75187:CDS 25.0%
!!! TAAAGGTATTCTTGCATATT+AGG - chr1.3:75319015-75319034 MS.gene75187:intron 25.0%
!!! TTAAATGTCTGAGCTATTTT+CGG - chr1.3:75315470-75315489 MS.gene75187:intron 25.0%
!!! TTCATTTTGGTCTATATATC+TGG - chr1.3:75319678-75319697 MS.gene75187:intron 25.0%
!!! TTGTTTTATTCGTGTTTGAT+TGG - chr1.3:75318507-75318526 MS.gene75187:CDS 25.0%
AAAATTTCCAGTGTTCTTGT+TGG - chr1.3:75320092-75320111 MS.gene75187:intron 30.0%
AAAGAGCAAGAAAAATTCCA+CGG - chr1.3:75315257-75315276 MS.gene75187:CDS 30.0%
AAATACACATCTCACATCAA+TGG + chr1.3:75316114-75316133 None:intergenic 30.0%
AATAGAAAATCTTCAGCACA+AGG - chr1.3:75315311-75315330 MS.gene75187:CDS 30.0%
AATCTCTTGTAAGCTATAGA+TGG - chr1.3:75316701-75316720 MS.gene75187:CDS 30.0%
ACTGTACTTAATGAAATGGA+TGG - chr1.3:75317324-75317343 MS.gene75187:intron 30.0%
AGAGATAAACATTGCTTGAA+AGG + chr1.3:75315689-75315708 None:intergenic 30.0%
AGATACTGGTACAAAAGAAT+GGG + chr1.3:75318843-75318862 None:intergenic 30.0%
AGATGAATGATGATCAACAT+CGG + chr1.3:75320546-75320565 None:intergenic 30.0%
CACAACGAAATGTAAATTCA+AGG - chr1.3:75316400-75316419 MS.gene75187:intron 30.0%
CAGTCATTTGATTCAAAATG+TGG + chr1.3:75317476-75317495 None:intergenic 30.0%
GAAATGGCAATTCAAAACAT+AGG + chr1.3:75318133-75318152 None:intergenic 30.0%
GATAGATCAATTGTTAGGAT+TGG + chr1.3:75318410-75318429 None:intergenic 30.0%
GGCTACTCCAAAAATTATTT+GGG + chr1.3:75318744-75318763 None:intergenic 30.0%
GTACCTTGATATATTTCCTT+AGG + chr1.3:75317572-75317591 None:intergenic 30.0%
GTATGTGTGAAATTTGAACT+AGG - chr1.3:75315840-75315859 MS.gene75187:intron 30.0%
GTGTCTTCTCAAAATCTAAT+AGG + chr1.3:75316655-75316674 None:intergenic 30.0%
GTTGACTGTACTTAATGAAA+TGG - chr1.3:75317320-75317339 MS.gene75187:intron 30.0%
TAGATACTGGTACAAAAGAA+TGG + chr1.3:75318844-75318863 None:intergenic 30.0%
TCAAGGTACAAATAGTTCAT+TGG - chr1.3:75317583-75317602 MS.gene75187:CDS 30.0%
TGCATAGATGATTGCTTTAA+AGG - chr1.3:75318096-75318115 MS.gene75187:intron 30.0%
TGGAAGAAAAGAGATCATAA+TGG - chr1.3:75317383-75317402 MS.gene75187:intron 30.0%
TTCAAGCAATGTTTATCTCT+AGG - chr1.3:75315689-75315708 MS.gene75187:CDS 30.0%
! AAATCCACCTAACCTTTTAA+AGG - chr1.3:75318998-75319017 MS.gene75187:intron 30.0%
! AATACCTTTAAAAGGTTAGG+TGG + chr1.3:75319005-75319024 None:intergenic 30.0%
! ACCAGAAGTATATACTTACA+AGG + chr1.3:75317876-75317895 None:intergenic 30.0%
! CCAGAAGTATATACTTACAA+GGG + chr1.3:75317875-75317894 None:intergenic 30.0%
! CTTTGCTTGTTCTTATTTGA+AGG - chr1.3:75315397-75315416 MS.gene75187:CDS 30.0%
! GTTTTGTATTAGGAAGATGT+GGG - chr1.3:75316244-75316263 MS.gene75187:intron 30.0%
! TGATAATGATGTATGCATGT+TGG + chr1.3:75320049-75320068 None:intergenic 30.0%
! TGTCTTTTATTCCAATTGTG+AGG - chr1.3:75319152-75319171 MS.gene75187:intron 30.0%
! TGTTTTGTATTAGGAAGATG+TGG - chr1.3:75316243-75316262 MS.gene75187:intron 30.0%
! TTCGTCTGAATGTTTTCTTT+AGG - chr1.3:75318604-75318623 MS.gene75187:CDS 30.0%
! TTCTGGTAATGTGAATGAAA+AGG - chr1.3:75317889-75317908 MS.gene75187:intron 30.0%
! TTTTGTAGTGAACAATGATG+AGG + chr1.3:75317612-75317631 None:intergenic 30.0%
!! ACAGTCAACTTGATTTTGAT+AGG - chr1.3:75319886-75319905 MS.gene75187:CDS 30.0%
!! AGTATTGATTGTTTCCTTGT+TGG - chr1.3:75319476-75319495 MS.gene75187:intron 30.0%
!! TAGATTTTGAGAAGACACTT+GGG - chr1.3:75316657-75316676 MS.gene75187:CDS 30.0%
!! TTAGATTTTGAGAAGACACT+TGG - chr1.3:75316656-75316675 MS.gene75187:CDS 30.0%
!! TTGTTTTATGCTTTGTCTTG+CGG + chr1.3:75320580-75320599 None:intergenic 30.0%
!!! TTTTTTTCCCATATCTAGGA+TGG + chr1.3:75316167-75316186 None:intergenic 30.0%
AAAGGTTTCGAAGAGAAATG+AGG - chr1.3:75319206-75319225 MS.gene75187:intron 35.0%
AAATGCTAACATGTGCTCTA+AGG - chr1.3:75316424-75316443 MS.gene75187:CDS 35.0%
AAGTGCATCCCTTAAAATCA+TGG + chr1.3:75318271-75318290 None:intergenic 35.0%
AATGCTAACATGTGCTCTAA+GGG - chr1.3:75316425-75316444 MS.gene75187:CDS 35.0%
ACAAAACAATGGAGGACTTA+TGG - chr1.3:75317417-75317436 MS.gene75187:intron 35.0%
ACAAGTAAAGGTTTCAGTGA+AGG - chr1.3:75315784-75315803 MS.gene75187:intron 35.0%
AGAAAATGGGAGCTTAAATG+CGG - chr1.3:75317185-75317204 MS.gene75187:CDS 35.0%
AGACATATTGCATGTCCATA+GGG - chr1.3:75315746-75315765 MS.gene75187:intron 35.0%
AGCTTGGAAGAATTGAAACA+TGG + chr1.3:75319552-75319571 None:intergenic 35.0%
ATATATTTCCTTAGGAGCGA+AGG + chr1.3:75317564-75317583 None:intergenic 35.0%
ATGAATAGACACGAAACAAC+AGG + chr1.3:75318045-75318064 None:intergenic 35.0%
ATTGTTTCCTTGTTGGATGT+TGG - chr1.3:75319483-75319502 MS.gene75187:intron 35.0%
CAAATCTATCAAGGAATGTC+TGG + chr1.3:75318490-75318509 None:intergenic 35.0%
CAACTGTCGAATGAAAATGA+AGG + chr1.3:75318247-75318266 None:intergenic 35.0%
CAGATTGTGAACTATAAGCA+CGG + chr1.3:75318694-75318713 None:intergenic 35.0%
CCAAAAATTATTTGGGTCAG+TGG + chr1.3:75318737-75318756 None:intergenic 35.0%
CCCTTGTAAGTATATACTTC+TGG - chr1.3:75317872-75317891 MS.gene75187:intron 35.0%
GATTGAAGCAAAGCAACATA+AGG - chr1.3:75315284-75315303 MS.gene75187:CDS 35.0%
GCAAATTGACCAAAGTTGAA+AGG - chr1.3:75319188-75319207 MS.gene75187:intron 35.0%
GCTCCTAAGGAAATATATCA+AGG - chr1.3:75317566-75317585 MS.gene75187:CDS 35.0%
GGGCTACTCCAAAAATTATT+TGG + chr1.3:75318745-75318764 None:intergenic 35.0%
GTCAGGATAGATCAATTGTT+AGG + chr1.3:75318415-75318434 None:intergenic 35.0%
GTTTCACAGCATTTACGAAA+TGG + chr1.3:75318149-75318168 None:intergenic 35.0%
TAAAAATCTTCGTCCTGCAA+TGG + chr1.3:75315941-75315960 None:intergenic 35.0%
TAAATTCACCTCCATTCTCA+TGG - chr1.3:75320013-75320032 MS.gene75187:intron 35.0%
TAGACATATTGCATGTCCAT+AGG - chr1.3:75315745-75315764 MS.gene75187:intron 35.0%
TCATTAACTCTCTTGAGCTT+TGG - chr1.3:75318657-75318676 MS.gene75187:CDS 35.0%
TCTAATGCCATCCTAGATAT+GGG - chr1.3:75316157-75316176 MS.gene75187:intron 35.0%
TCTTCGAAACCTTTCAACTT+TGG + chr1.3:75319200-75319219 None:intergenic 35.0%
TGAATATGTCTTCCAATGCT+TGG - chr1.3:75317675-75317694 MS.gene75187:CDS 35.0%
TGATGACTACAAAACAATGG+AGG - chr1.3:75317409-75317428 MS.gene75187:intron 35.0%
TGATTTACGCAGCATATTGA+AGG - chr1.3:75318934-75318953 MS.gene75187:intron 35.0%
TGTAGGAAATCTCAAGAGAT+TGG - chr1.3:75316904-75316923 MS.gene75187:CDS 35.0%
TGTGTGAAATTTGAACTAGG+TGG - chr1.3:75315843-75315862 MS.gene75187:intron 35.0%
TTCTAATGCCATCCTAGATA+TGG - chr1.3:75316156-75316175 MS.gene75187:intron 35.0%
TTCTTCATCACCAAAAACAG+AGG + chr1.3:75320126-75320145 None:intergenic 35.0%
TTTCAATTCTTCCAAGCTCT+CGG - chr1.3:75319554-75319573 MS.gene75187:intron 35.0%
! AATTTTCCACACTCAGATTG+AGG - chr1.3:75319332-75319351 MS.gene75187:intron 35.0%
! ACAGTTGGCCATGATTTTAA+GGG - chr1.3:75318260-75318279 MS.gene75187:intron 35.0%
! CCACTGACCCAAATAATTTT+TGG - chr1.3:75318734-75318753 MS.gene75187:CDS 35.0%
! CTTCATTTTCATTCGACAGT+TGG - chr1.3:75318245-75318264 MS.gene75187:intron 35.0%
! CTTTTCGCAAGGTTTATGAA+TGG - chr1.3:75318630-75318649 MS.gene75187:CDS 35.0%
! GTGCAGTGATCATAATTTGT+AGG - chr1.3:75316887-75316906 MS.gene75187:intron 35.0%
! TTAACAACCTTTTCCATTGC+AGG - chr1.3:75315925-75315944 MS.gene75187:CDS 35.0%
! TTCTTTTATCCAGGAAGATG+TGG - chr1.3:75317029-75317048 MS.gene75187:CDS 35.0%
! TTGTGTGTTTGCTGGTAAAT+TGG - chr1.3:75316781-75316800 MS.gene75187:CDS 35.0%
!! AAGAACATTTGTGACTTGCT+AGG - chr1.3:75317922-75317941 MS.gene75187:intron 35.0%
!! AGATTTTGAGAAGACACTTG+GGG - chr1.3:75316658-75316677 MS.gene75187:CDS 35.0%
!! ATACTTTGATAGTGCACTAG+AGG + chr1.3:75319927-75319946 None:intergenic 35.0%
!! TATTGAAGGTACTCGTTACT+TGG - chr1.3:75318948-75318967 MS.gene75187:intron 35.0%
!!! CGTTTTTTTGTTTTGCTCTC+TGG + chr1.3:75319964-75319983 None:intergenic 35.0%
!!! TGCTTTTTCCTCTTTCCTTT+TGG + chr1.3:75320413-75320432 None:intergenic 35.0%
!!! TTTGTCTTGCGGTTTTGTTT+TGG + chr1.3:75320569-75320588 None:intergenic 35.0%
!!! TTTTTTGTTTTGCTCTCTGG+CGG + chr1.3:75319961-75319980 None:intergenic 35.0%
AACTGCGTCATTGAACTTCT+CGG - chr1.3:75318192-75318211 MS.gene75187:intron 40.0%
AAGTGTCAAGCTCATAAGTC+AGG + chr1.3:75318432-75318451 None:intergenic 40.0%
AATTACTGCACAAGACCGAA+TGG + chr1.3:75317712-75317731 None:intergenic 40.0%
AATTGGTTGAAGAGGAATGC+CGG - chr1.3:75316798-75316817 MS.gene75187:CDS 40.0%
ACAAGCAAAGTTGCATACAC+AGG + chr1.3:75315387-75315406 None:intergenic 40.0%
ACAGTAATCCATGAGAATGG+AGG + chr1.3:75320024-75320043 None:intergenic 40.0%
ACATTGAGGCGTGAAATAAG+TGG + chr1.3:75319821-75319840 None:intergenic 40.0%
ACGACTCATTAAAGGAATCC+AGG - chr1.3:75319981-75320000 MS.gene75187:intron 40.0%
ACGTAGACGAAGACAAGTAA+AGG - chr1.3:75315772-75315791 MS.gene75187:intron 40.0%
AGAGAGTTGTGCATCTGTAT+TGG - chr1.3:75318066-75318085 MS.gene75187:intron 40.0%
AGGAGCAATCTTGACAATAC+CGG + chr1.3:75316820-75316839 None:intergenic 40.0%
AGTAAGCTGCTTATCCAAAC+AGG - chr1.3:75315636-75315655 MS.gene75187:CDS 40.0%
ATAGACACGAAACAACAGGA+AGG + chr1.3:75318041-75318060 None:intergenic 40.0%
ATCAGGTGTCTCTTCATTTC+TGG - chr1.3:75317998-75318017 MS.gene75187:intron 40.0%
CAAGGTAGGACTTCACAATA+TGG + chr1.3:75317443-75317462 None:intergenic 40.0%
CATATTGTGAAGTCCTACCT+TGG - chr1.3:75317441-75317460 MS.gene75187:intron 40.0%
CATTGAGGCGTGAAATAAGT+GGG + chr1.3:75319820-75319839 None:intergenic 40.0%
CATTGCAGTGGCTAAATGAT+GGG - chr1.3:75316336-75316355 MS.gene75187:intron 40.0%
CCACAAATCAACCATAGAAG+TGG + chr1.3:75317151-75317170 None:intergenic 40.0%
CTACTGAACCAAAAGGAAAG+AGG - chr1.3:75320402-75320421 MS.gene75187:intron 40.0%
CTCCACAACATCATCATCAA+TGG + chr1.3:75320453-75320472 None:intergenic 40.0%
CTTAGCTACTAAGCTTGCAT+TGG - chr1.3:75316189-75316208 MS.gene75187:intron 40.0%
CTTTCTACCTAATGATCCTG+CGG - chr1.3:75319395-75319414 MS.gene75187:intron 40.0%
GAAGAATTGAAACATGGAGC+AGG + chr1.3:75319546-75319565 None:intergenic 40.0%
GACACAGTAATCCATGAGAA+TGG + chr1.3:75320027-75320046 None:intergenic 40.0%
GCCACAAACATGTCTCTAAA+GGG + chr1.3:75316376-75316395 None:intergenic 40.0%
GCTAAACACTATCGTATGGT+GGG - chr1.3:75319700-75319719 MS.gene75187:intron 40.0%
GGAGGATACTAAAGAGAATG+AGG - chr1.3:75320160-75320179 MS.gene75187:intron 40.0%
GTAAGCTGCTTATCCAAACA+GGG - chr1.3:75315637-75315656 MS.gene75187:CDS 40.0%
GTACTTGAAAGAGAATGACC+CGG - chr1.3:75315964-75315983 MS.gene75187:intron 40.0%
GTGAAATTTGAACTAGGTGG+TGG - chr1.3:75315846-75315865 MS.gene75187:intron 40.0%
TAGACACGAAACAACAGGAA+GGG + chr1.3:75318040-75318059 None:intergenic 40.0%
TCACTGAACTTAAGCAGATC+CGG + chr1.3:75315986-75316005 None:intergenic 40.0%
TCAGGTGTCTCTTCATTTCT+GGG - chr1.3:75317999-75318018 MS.gene75187:intron 40.0%
TCATCTCCAGCATATCCAAA+AGG + chr1.3:75318871-75318890 None:intergenic 40.0%
TCATTGCAGTGGCTAAATGA+TGG - chr1.3:75316335-75316354 MS.gene75187:intron 40.0%
TCTAGCAGCAAAATGTTACG+AGG + chr1.3:75318364-75318383 None:intergenic 40.0%
TCTCATCATCATCACCATAG+TGG + chr1.3:75317245-75317264 None:intergenic 40.0%
TCTGGCTAAACACTATCGTA+TGG - chr1.3:75319696-75319715 MS.gene75187:intron 40.0%
TGAAGAATCAGCAAGTGATG+AGG - chr1.3:75320139-75320158 MS.gene75187:intron 40.0%
TGCCACAAACATGTCTCTAA+AGG + chr1.3:75316377-75316396 None:intergenic 40.0%
TGCTGGTAAATTGGTTGAAG+AGG - chr1.3:75316790-75316809 MS.gene75187:CDS 40.0%
TTAGCTATTAAGGCCCTGTT+TGG + chr1.3:75315653-75315672 None:intergenic 40.0%
TTCTGTGGTTGAAGAACTTG+CGG - chr1.3:75319087-75319106 MS.gene75187:intron 40.0%
TTCTTCTCCAACAAGAACAC+TGG + chr1.3:75320102-75320121 None:intergenic 40.0%
TTGTGCATCTGTATTGGATC+TGG - chr1.3:75318072-75318091 MS.gene75187:intron 40.0%
! ACCAGTATCTATGCTCCTTT+TGG - chr1.3:75318853-75318872 MS.gene75187:intron 40.0%
! ATCAACATCGGCATTTTTCC+CGG + chr1.3:75320534-75320553 None:intergenic 40.0%
! CGTAACATTTTGCTGCTAGA+GGG - chr1.3:75318364-75318383 MS.gene75187:CDS 40.0%
! CTGTTTCGCTTCTTTTATCC+AGG - chr1.3:75317020-75317039 MS.gene75187:CDS 40.0%
! GACAGTTGGCCATGATTTTA+AGG - chr1.3:75318259-75318278 MS.gene75187:intron 40.0%
! GAGCAATACTTGTCATTTCC+AGG + chr1.3:75320236-75320255 None:intergenic 40.0%
! GGAGAAGAATCCTCTGTTTT+TGG - chr1.3:75320113-75320132 MS.gene75187:intron 40.0%
! TATGCTCCTTTTGGATATGC+TGG - chr1.3:75318862-75318881 MS.gene75187:intron 40.0%
! TCCAAAAGGAGCATAGATAC+TGG + chr1.3:75318857-75318876 None:intergenic 40.0%
! TCCCTTTAGAGACATGTTTG+TGG - chr1.3:75316372-75316391 MS.gene75187:intron 40.0%
! TCGTAACATTTTGCTGCTAG+AGG - chr1.3:75318363-75318382 MS.gene75187:CDS 40.0%
! TGCGCTTTTCATTCACAAAC+TGG + chr1.3:75319365-75319384 None:intergenic 40.0%
! TTGGCATGCATCAGATTTTG+TGG - chr1.3:75319291-75319310 MS.gene75187:intron 40.0%
!! AAATGTGGAGAGCATTTCCA+AGG + chr1.3:75317461-75317480 None:intergenic 40.0%
!! CAATTGTTAGGATTGGTTCC+AGG + chr1.3:75318403-75318422 None:intergenic 40.0%
!! CATTGATGATGATGTTGTGG+AGG - chr1.3:75320451-75320470 MS.gene75187:intron 40.0%
!! CCACTTCTATGGTTGATTTG+TGG - chr1.3:75317148-75317167 MS.gene75187:CDS 40.0%
!! TCTTTAGGAAGCTTTTCGCA+AGG - chr1.3:75318619-75318638 MS.gene75187:CDS 40.0%
!! TGCCATTGATGATGATGTTG+TGG - chr1.3:75320448-75320467 MS.gene75187:intron 40.0%
!!! AGAGGCTTGTGTTTTTTCTG+TGG - chr1.3:75319072-75319091 MS.gene75187:intron 40.0%
!!! CTCTTTCCTTTTGGTTCAGT+AGG + chr1.3:75320404-75320423 None:intergenic 40.0%
AAGTTGCGCAACCTCACAAT+TGG + chr1.3:75319166-75319185 None:intergenic 45.0%
AATGCCCGTGTCTTAAGAGT+TGG + chr1.3:75319049-75319068 None:intergenic 45.0%
AATGGGTAGAAGCAGCAATC+TGG + chr1.3:75318826-75318845 None:intergenic 45.0%
AGAACCACAGGTAGATGAGA+AGG - chr1.3:75317071-75317090 MS.gene75187:CDS 45.0%
AGAATCAGCAAGTGATGAGG+AGG - chr1.3:75320142-75320161 MS.gene75187:intron 45.0%
AGCATCGTCAGTCACTTCAT+TGG + chr1.3:75319648-75319667 None:intergenic 45.0%
AGGTCAACCAACATCCAACA+AGG + chr1.3:75319493-75319512 None:intergenic 45.0%
AGTTCCATCCACGTTCTCTT+TGG + chr1.3:75320189-75320208 None:intergenic 45.0%
ATAGCCTTCTCATCTACCTG+TGG + chr1.3:75317078-75317097 None:intergenic 45.0%
CAACAGCCTACTGAACCAAA+AGG - chr1.3:75320395-75320414 MS.gene75187:intron 45.0%
CAAGCCAACTCTTAAGACAC+GGG - chr1.3:75319042-75319061 MS.gene75187:intron 45.0%
CACTGAACTTAAGCAGATCC+GGG + chr1.3:75315985-75316004 None:intergenic 45.0%
CACTGTGGAGTTACTCTGTT+GGG - chr1.3:75319119-75319138 MS.gene75187:intron 45.0%
CAGGTGTCTCTTCATTTCTG+GGG - chr1.3:75318000-75318019 MS.gene75187:intron 45.0%
CCGGATACATCTCAACCTAA+GGG + chr1.3:75318795-75318814 None:intergenic 45.0%
CGCAGGATCATTAGGTAGAA+AGG + chr1.3:75319397-75319416 None:intergenic 45.0%
CGGATACATCTCAACCTAAG+GGG + chr1.3:75318794-75318813 None:intergenic 45.0%
CTGAGGAATGCTTTGCTTTC+AGG - chr1.3:75320366-75320385 MS.gene75187:intron 45.0%
CTTTGCTTCAATCACAACCG+TGG + chr1.3:75315277-75315296 None:intergenic 45.0%
GAGGGATACAATCAATCACC+TGG - chr1.3:75318382-75318401 MS.gene75187:CDS 45.0%
GAGTTACTCTGTTGGGTTCA+TGG - chr1.3:75319126-75319145 MS.gene75187:intron 45.0%
GCAAGCCAACTCTTAAGACA+CGG - chr1.3:75319041-75319060 MS.gene75187:intron 45.0%
GGAAGATGTGGATGATGACA+TGG - chr1.3:75317041-75317060 MS.gene75187:CDS 45.0%
GGCTAAACACTATCGTATGG+TGG - chr1.3:75319699-75319718 MS.gene75187:intron 45.0%
GTGGATGATGACATGGAAGA+TGG - chr1.3:75317048-75317067 MS.gene75187:CDS 45.0%
GTGTGTTTGTGTATGCAGCT+GGG + chr1.3:75320288-75320307 None:intergenic 45.0%
TAAGACACGGGCATTTCAAG+AGG - chr1.3:75319054-75319073 MS.gene75187:intron 45.0%
TCAAGAAAAGATGATGCCGC+AGG + chr1.3:75319414-75319433 None:intergenic 45.0%
TCCGAAAAAGGTCATTGCAG+TGG - chr1.3:75316324-75316343 MS.gene75187:intron 45.0%
TCCGGATACATCTCAACCTA+AGG + chr1.3:75318796-75318815 None:intergenic 45.0%
TCTTCGTCCTGCAATGGAAA+AGG + chr1.3:75315935-75315954 None:intergenic 45.0%
TGAGAAGGCTATTGAGCATG+AGG - chr1.3:75317086-75317105 MS.gene75187:CDS 45.0%
TGAGCATGAGGTTCAAGCAA+AGG - chr1.3:75317098-75317117 MS.gene75187:CDS 45.0%
TGTCATCATCCACATCTTCC+TGG + chr1.3:75317041-75317060 None:intergenic 45.0%
TGTCCTAAAAGCCCTCATCA+GGG + chr1.3:75317217-75317236 None:intergenic 45.0%
TTGTTGAAGCTTCCTGCTTC+TGG - chr1.3:75317360-75317379 MS.gene75187:intron 45.0%
! AAGGCGTGTTGATATGCAGT+CGG + chr1.3:75318228-75318247 None:intergenic 45.0%
! CAGCAATCTGGTTCAACATC+CGG + chr1.3:75318814-75318833 None:intergenic 45.0%
! CATTAGCCTCAATCTGAGTG+TGG + chr1.3:75319341-75319360 None:intergenic 45.0%
! CTTCCAATGCTTGGTGATTG+TGG - chr1.3:75317684-75317703 MS.gene75187:CDS 45.0%
! CTTGTCATTTCCAGGTAACC+AGG + chr1.3:75320228-75320247 None:intergenic 45.0%
! GAACTAGGTGGTGGTTGATA+GGG - chr1.3:75315855-75315874 MS.gene75187:CDS 45.0%
! GCCACTGCAATGACCTTTTT+CGG + chr1.3:75316328-75316347 None:intergenic 45.0%
! TCTTTTCTTCCACCAGAAGC+AGG + chr1.3:75317375-75317394 None:intergenic 45.0%
! TGAACTAGGTGGTGGTTGAT+AGG - chr1.3:75315854-75315873 MS.gene75187:CDS 45.0%
! TGATGATGTTGTGGAGGACT+TGG - chr1.3:75320457-75320476 MS.gene75187:intron 45.0%
! TGCGGCATCATCTTTTCTTG+AGG - chr1.3:75319413-75319432 MS.gene75187:intron 45.0%
! TTGGTGATTGTGGCACCATT+CGG - chr1.3:75317694-75317713 MS.gene75187:CDS 45.0%
! TTTAGCTCATCCTGGTTACC+TGG - chr1.3:75320215-75320234 MS.gene75187:intron 45.0%
! TTTAGGACAGCATGCCACTA+TGG - chr1.3:75317228-75317247 MS.gene75187:intron 45.0%
!! CCCTTAGGTTGAGATGTATC+CGG - chr1.3:75318792-75318811 MS.gene75187:CDS 45.0%
!! TCTCTTCATTTCTGGGGTAC+TGG - chr1.3:75318006-75318025 MS.gene75187:intron 45.0%
AATGAGGCAGCTTATTCGCG+AGG - chr1.3:75319222-75319241 MS.gene75187:intron 50.0%
CAGAGTAACTCCACAGTGCT+AGG + chr1.3:75319117-75319136 None:intergenic 50.0%
CATGGAAGATGGAGAACCAC+AGG - chr1.3:75317059-75317078 MS.gene75187:CDS 50.0%
CGTCATTGAACTTCTCGGAG+TGG - chr1.3:75318197-75318216 MS.gene75187:intron 50.0%
CGTGTGTTTGTGTATGCAGC+TGG + chr1.3:75320289-75320308 None:intergenic 50.0%
CTGTCCTAAAAGCCCTCATC+AGG + chr1.3:75317218-75317237 None:intergenic 50.0%
CTTCGTCTACGTCTACCCTA+TGG + chr1.3:75315764-75315783 None:intergenic 50.0%
CTTTGCCAATGCCTCCTGTA+GGG + chr1.3:75318910-75318929 None:intergenic 50.0%
GACTGTGCTTGTGTGTTTGC+TGG - chr1.3:75316773-75316792 MS.gene75187:CDS 50.0%
GAGTTGAATAGACCCCCTAC+AGG - chr1.3:75318893-75318912 MS.gene75187:intron 50.0%
GATGATGCCGCAGGATCATT+AGG + chr1.3:75319405-75319424 None:intergenic 50.0%
GATGCCAAAGAGAACGTGGA+TGG - chr1.3:75320182-75320201 MS.gene75187:intron 50.0%
GCACTGTGGAGTTACTCTGT+TGG - chr1.3:75319118-75319137 MS.gene75187:intron 50.0%
GTGCCACAATCACCAAGCAT+TGG + chr1.3:75317690-75317709 None:intergenic 50.0%
TGAGGATGCCAAAGAGAACG+TGG - chr1.3:75320178-75320197 MS.gene75187:intron 50.0%
TTGAAGCTTCCTGCTTCTGG+TGG - chr1.3:75317363-75317382 MS.gene75187:intron 50.0%
TTGAATAGACCCCCTACAGG+AGG - chr1.3:75318896-75318915 MS.gene75187:intron 50.0%
TTTGCCAATGCCTCCTGTAG+GGG + chr1.3:75318909-75318928 None:intergenic 50.0%
! CTGCTGCATTTAGCTCATCC+TGG - chr1.3:75320207-75320226 MS.gene75187:intron 50.0%
! GTTCCCTGATGAGGGCTTTT+AGG - chr1.3:75317211-75317230 MS.gene75187:intron 50.0%
!! CTAAATGATGGGTGACTGGC+TGG - chr1.3:75316347-75316366 MS.gene75187:intron 50.0%
!! CTGCTTTTCCTTCGCTCCTA+AGG - chr1.3:75317553-75317572 MS.gene75187:CDS 50.0%
!! CTTCATTTCTGGGGTACTGG+TGG - chr1.3:75318009-75318028 MS.gene75187:intron 50.0%
!! GTGGAGAGCATTTCCAAGGT+AGG + chr1.3:75317457-75317476 None:intergenic 50.0%
!! GTGGCTAAATGATGGGTGAC+TGG - chr1.3:75316343-75316362 MS.gene75187:intron 50.0%
ACCTAGCCGTGGGAACTAGA+CGG + chr1.3:75318766-75318785 None:intergenic 55.0%
ATGCGGTTCGTTCCCTGATG+AGG - chr1.3:75317202-75317221 MS.gene75187:CDS 55.0%
CGGCTAGGTACTTTCCCCTT+AGG - chr1.3:75318777-75318796 MS.gene75187:CDS 55.0%
GCTTTGCCAATGCCTCCTGT+AGG + chr1.3:75318911-75318930 None:intergenic 55.0%
TATGCAGGTAGCCGAGAGCT+TGG + chr1.3:75319568-75319587 None:intergenic 55.0%
TGCGGTTCGTTCCCTGATGA+GGG - chr1.3:75317203-75317222 MS.gene75187:CDS 55.0%
TTGCCAATGCCTCCTGTAGG+GGG + chr1.3:75318908-75318927 None:intergenic 55.0%
TTGCGGAACACCTAGCACTG+TGG - chr1.3:75319104-75319123 MS.gene75187:intron 55.0%
! AGTAGCCCGTCTAGTTCCCA+CGG - chr1.3:75318757-75318776 MS.gene75187:CDS 55.0%
! CGGCATTTTTCCCGGCAGAA+GGG + chr1.3:75320526-75320545 None:intergenic 55.0%
! TCGGCATTTTTCCCGGCAGA+AGG + chr1.3:75320527-75320546 None:intergenic 55.0%
!! AAGGGGAAAGTACCTAGCCG+TGG + chr1.3:75318777-75318796 None:intergenic 55.0%
!! AGGGGAAAGTACCTAGCCGT+GGG + chr1.3:75318776-75318795 None:intergenic 55.0%
!! CATTTCTGGGGTACTGGTGG+AGG - chr1.3:75318012-75318031 MS.gene75187:intron 55.0%
CCTAGCCGTGGGAACTAGAC+GGG + chr1.3:75318765-75318784 None:intergenic 60.0%
TCAAGCGACAGCCCTTCTGC+CGG - chr1.3:75320512-75320531 MS.gene75187:intron 60.0%
! AGACCCCCTACAGGAGGCAT+TGG - chr1.3:75318902-75318921 MS.gene75187:intron 60.0%
! GCAGAAGGGCTGTCGCTTGA+AGG + chr1.3:75320512-75320531 None:intergenic 60.0%
CAAGCGACAGCCCTTCTGCC+GGG - chr1.3:75320513-75320532 MS.gene75187:intron 65.0%
! CCCGTCTAGTTCCCACGGCT+AGG - chr1.3:75318762-75318781 MS.gene75187:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 75315223 75320631 75315223 ID=MS.gene75187
chr1.3 mRNA 75315223 75320631 75315223 ID=MS.gene75187.t1;Parent=MS.gene75187
chr1.3 exon 75320522 75320631 75320522 ID=MS.gene75187.t1.exon1;Parent=MS.gene75187.t1
chr1.3 CDS 75320522 75320631 75320522 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75319836 75319907 75319836 ID=MS.gene75187.t1.exon2;Parent=MS.gene75187.t1
chr1.3 CDS 75319836 75319907 75319836 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75318267 75318812 75318267 ID=MS.gene75187.t1.exon3;Parent=MS.gene75187.t1
chr1.3 CDS 75318267 75318812 75318267 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75317549 75317851 75317549 ID=MS.gene75187.t1.exon4;Parent=MS.gene75187.t1
chr1.3 CDS 75317549 75317851 75317549 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75316899 75317228 75316899 ID=MS.gene75187.t1.exon5;Parent=MS.gene75187.t1
chr1.3 CDS 75316899 75317228 75316899 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75316611 75316817 75316611 ID=MS.gene75187.t1.exon6;Parent=MS.gene75187.t1
chr1.3 CDS 75316611 75316817 75316611 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75316420 75316506 75316420 ID=MS.gene75187.t1.exon7;Parent=MS.gene75187.t1
chr1.3 CDS 75316420 75316506 75316420 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75315852 75315946 75315852 ID=MS.gene75187.t1.exon8;Parent=MS.gene75187.t1
chr1.3 CDS 75315852 75315946 75315852 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75315608 75315751 75315608 ID=MS.gene75187.t1.exon9;Parent=MS.gene75187.t1
chr1.3 CDS 75315608 75315751 75315608 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
chr1.3 exon 75315223 75315466 75315223 ID=MS.gene75187.t1.exon10;Parent=MS.gene75187.t1
chr1.3 CDS 75315223 75315466 75315223 ID=cds.MS.gene75187.t1;Parent=MS.gene75187.t1
Gene Sequence

>MS.gene75187

AGATTAATGTGGATGGAGAAAATAATGTAAAAAGAAAGAGCAAGAAAAATTCCACGGTTGTGATTGAAGCAAAGCAACATAAGGAGCAAATAGAAAATCTTCAGCACAAGGTTAGACCCATTACATTACATTACATTGTTGTTTCTTAGTATACTAAGATACCTGTGTATGCAACTTTGCTTGTTCTTATTTGAAGGATTCTCTTTAATTTATTGTCTGTTTCAGCTTATTTGCTTATAAATTTTGTTTAAATGTCTGAGCTATTTTCGGCTTATTTTCATAAGTTCTCTAAGATAGCTTATGAAAACAACTAATAGCTTAACAAAAACAATTTAACTTTATTTTATCTTTTTCTATTGAAATAGCTTATACATAAGTGTTTATCATGAGAAGCGCTTATGCTATAAGCTGCAAGTAAGCTGCTTATCCAAACAGGGCCTTAATAGCTAAATATAAGTTTTGTCCTTTCAAGCAATGTTTATCTCTAGGTTGTTTACGTTTATATAATTTTATTAGAGAAATTAGACATATTGCATGTCCATAGGGTAGACGTAGACGAAGACAAGTAAAGGTTTCAGTGAAGGTTTTGATAATTTAATTCACATTTGCAAATGCTTGTATGTGTGAAATTTGAACTAGGTGGTGGTTGATAGGGAATTACCTTTTATATATTTATTGGGCTACATTCTGTTAGCAATGTTATTAACAACCTTTTCCATTGCAGGACGAAGATTTTTATGAGTACTTGAAAGAGAATGACCCGGATCTGCTTAAGTTCAGTGATGACGATATTGATGTATGTTTCATTTTAACACTTCCTATCTAATATCTGTCTTGTTTTTGCTTCATACATTAATTGAGATGAATATGGTTCTGTGATGCATTGAGCCATTGATGTGAGATGTGTATTTCAAATGAATGATATGCAGTATCTTCTAATGCCATCCTAGATATGGGAAAAAAATTCTTAGCTACTAAGCTTGCATTGGTTATCAATCTCTTCTGCTTCATACTTTTGTTTGTTTTGTATTAGGAAGATGTGGGTGCTAAGCTTGCATTGTTTGTTATCTTACCCAATATTTCTTTTTCCTTTTTTTTTCATCCGAAAAAGGTCATTGCAGTGGCTAAATGATGGGTGACTGGCTGGTTTCCCTTTAGAGACATGTTTGTGGCACAACACAACGAAATGTAAATTCAAGGCAAATGCTAACATGTGCTCTAAGGGCACATGTTTAGAAACTCAATAAAGAAACATTCATCATAAAAGTCATGCATTCAACTTTTAAAATTATTTTTTCATTGCAAAAGTTCCATTTTGTGTTCATTATTGGTAACCCACCAATCACTACAAATTTAATTTTTGCTTCTTGAGATTTGTATTTTTTTAGACCTATAGGCTATAAATCTTTTAGGTTAAGGTTATGGTTCTCCTATTAGATTTTGAGAAGACACTTGGGGTAGAGTCATGATATTTATTGAATCTCTTGTAAGCTATAGATGGTTTTACTTGAAATTTATGATCTATCCTTTAATCAAGATAGAAAATTTTGGACTGTGCTTGTGTGTTTGCTGGTAAATTGGTTGAAGAGGAATGCCGGTATTGTCAAGATTGCTCCTTTTTGCTGTTATGTTATATAGGATTTCACGTTCATCAACTATATTTCGTGCAGTGATCATAATTTGTAGGAAATCTCAAGAGATTGGTTTCAGTCTATTTTTTTTTTCTGTTACCTATTTGCATGCATTACTAAATTGCTATCAGTGTGACACTTTGTTAGCAATAGAAACTATATATAACTGTTTCGCTTCTTTTATCCAGGAAGATGTGGATGATGACATGGAAGATGGAGAACCACAGGTAGATGAGAAGGCTATTGAGCATGAGGTTCAAGCAAAGGATAAAAAACGTTCTAATAAAGTTATAACCACTTCTATGGTTGATTTGTGGTGCAAATCAATTAAAGAAAATGGGAGCTTAAATGCGGTTCGTTCCCTGATGAGGGCTTTTAGGACAGCATGCCACTATGGTGATGATGATGAGAATGATTCTACAGCAAAGCTTAGTGTAATGTCTAGCGTTGTGTTCAACAAAATAATGTTGACTGTACTTAATGAAATGGATGGAATACTAAGAAAATTGTTGAAGCTTCCTGCTTCTGGTGGAAGAAAAGAGATCATAATGGATTTGATGACTACAAAACAATGGAGGACTTATGGCCATATTGTGAAGTCCTACCTTGGAAATGCTCTCCACATTTTGAATCAAATGACTGACTCGCAAATGATATCATTTACTTTACATCGGCTAAAATATTCTTCATTGTTGTTGGCTGCTTTTCCTTCGCTCCTAAGGAAATATATCAAGGTACAAATAGTTCATTGGTCACCTCATCATTGTTCACTACAAAATTCATAGATGAGCATTAGTACTTTAAAGTTTGTGGCTCTGTACTGAATATGTCTTCCAATGCTTGGTGATTGTGGCACCATTCGGTCTTGTGCAGTAATTGATTAAAAAGCTTAATAGATGGACAGAAATCAACTAAATTTTTCTGAAATCTGGATCATATAAATGATACATTTTTCCGTACTCGAACAAAATTAAGAATAGTATCATTCGGTAAACTTGCTGTTGCATGCAGTTTTTTTCCCTTGTAAGTATATACTTCTGGTAATGTGAATGAAAAGGCTTCAATGCAAAGAACATTTGTGACTTGCTAGGACATAACTTAACATATGTCTATTCATTTGGTAAATTACTTTCTTGTTGAAATTATCAGGTGTCTCTTCATTTCTGGGGTACTGGTGGAGGTGCCCTTCCTGTTGTTTCGTGTCTATTCATGAGAGAGTTGTGCATCTGTATTGGATCTGGCTGCATAGATGATTGCTTTAAAGGAATATATAAAGCCTATGTTTTGAATTGCCATTTCGTAAATGCTGTGAAACTTAAACATATTCGTTTTCTTAGCAACTGCGTCATTGAACTTCTCGGAGTGGATCTTCCGACTGCATATCAACACGCCTTCATTTTCATTCGACAGTTGGCCATGATTTTAAGGGATGCACTTAATACAAAAACTAAGGTGCTGTTTATTTGTTCACTATATGTTATTTTCTTTCTTGTAACTGTAAGAAGTGCCTCGTAACATTTTGCTGCTAGAGGGATACAATCAATCACCTGGAACCAATCCTAACAATTGATCTATCCTGACTTATGAGCTTGACACTTCCGTATCTCATTAGTAATGAGTAAAGGAAATGTGACCAGACATTCCTTGATAGATTTGTTTTATTCGTGTTTGATTGGAGCTTTTCACTAATCAAAACAAATTGTTTGTGCATTTTTGACAATTTTATTTTATGGTTCTTACGTTGCTCTTCTTCGTCTGAATGTTTTCTTTAGGAAGCTTTTCGCAAGGTTTATGAATGGAAGTTCATTAACTCTCTTGAGCTTTGGACTGATGCTATCCGTGCTTATAGTTCACAATCTGACTTTAAGCAACTTGCATATCCACTGACCCAAATAATTTTTGGAGTAGCCCGTCTAGTTCCCACGGCTAGGTACTTTCCCCTTAGGTTGAGATGTATCCGGATGTTGAACCAGATTGCTGCTTCTACCCATTCTTTTGTACCAGTATCTATGCTCCTTTTGGATATGCTGGAGATGAAAGAGTTGAATAGACCCCCTACAGGAGGCATTGGCAAAGCTGTTGATTTACGCAGCATATTGAAGGTACTCGTTACTTGGTGAAATTGTGCATTTGTTGAAAACTTTAAATCCACCTAACCTTTTAAAGGTATTCTTGCATATTAGGTTAGCAAGCCAACTCTTAAGACACGGGCATTTCAAGAGGCTTGTGTTTTTTCTGTGGTTGAAGAACTTGCGGAACACCTAGCACTGTGGAGTTACTCTGTTGGGTTCATGGAGTTGTCTTTTATTCCAATTGTGAGGTTGCGCAACTTTTGCAAATTGACCAAAGTTGAAAGGTTTCGAAGAGAAATGAGGCAGCTTATTCGCGAGGTATCTTATTAAAAAGATCATAAACCTTTTATGTTTTACTTTTATCATTGGCATGCATCAGATTTTGTGGCATTCGTCTCTAATATTTAATTTTCCACACTCAGATTGAGGCTAATGTCCAGTTTGTGAATGAAAAGCGCATGTCGATTTCCTTTCTACCTAATGATCCTGCGGCATCATCTTTTCTTGAGGTTTGCTCAGATTTTCTCTTTACTTTTGAGGAATGAGTGAGAGTATTGATTGTTTCCTTGTTGGATGTTGGTTGACCTTTTTCATTCATTTGTTTACTTACATTGTAGCCTGCTCCATGTTTCAATTCTTCCAAGCTCTCGGCTACCTGCATAAAAACTTTTTTCCTTAAGCAAATAAACTTCTATAGGTTGTTACTTTATTACTGAAGACCAATGAAGTGACTGACGATGCTATTAAGTTATTTCATTTTGGTCTATATATCTGGCTAAACACTATCGTATGGTGGGAATTGAATGAAGTCATTTTATTGATGTTTAATGTTTTTGTGTTGCCATTTTCTTTTCCTTTATTTTATTATATCAAGTGTGTATAGATTATCGTCCCACTTATTTCACGCCTCAATGTCACTTTACTTTAAATTAAATGCCCATTTATATTTGAGAATTGTAAACAGTCAACTTGATTTTGATAGGATGAGAAGAAGTCAGCCTCTAGTGCACTATCAAAGTATGTTATAACACTCCGCCAGAGAGCAAAACAAAAAAACGACTCATTAAAGGAATCCAGGTTTGAATTTTAAATTCACCTCCATTCTCATGGATTACTGTGTCCAACATGCATACATCATTATCATATATGTTTCTTATATAACTTAAAAAATTTCCAGTGTTCTTGTTGGAGAAGAATCCTCTGTTTTTGGTGATGAAGAATCAGCAAGTGATGAGGAGGATACTAAAGAGAATGAGGATGCCAAAGAGAACGTGGATGGAACTGCTGCATTTAGCTCATCCTGGTTACCTGGAAATGACAAGTATTGCTCTTTTTCTTTGTTCATCTTTCACTGACAAACCCAGCTGCATACACAAACACACGTACATTCGTGCACATACTACACGATGACATTAACACAAATTTCTTTTTACTTTTTATCTGAGGAATGCTTTGCTTTCAGGATAAAACAACAGCCTACTGAACCAAAAGGAAAGAGGAAAAAGCATAAAAAAGAAAGAACTGCCATTGATGATGATGTTGTGGAGGACTTGGTACTTAGTTCTGATGAAGATGAAGATTTGCCTTCAAGCGACAGCCCTTCTGCCGGGAAAAATGCCGATGTTGATCATCATTCATCTCCAAAACAAAACCGCAAGACAAAGCATAAAACAAAAAGGTTGAAAAGGAATAAATCTCACACCTAA

Protein sequence

>MS.gene75187.t1

RLMWMEKIMUKERARKIPRLULKQSNIRSKUKIFSTRTKIFMSTUKRMTRICLSSVMTILMKMWMMTWKMENHRUMRRLLSMRFKQRIKNVLIKLUPLLWLICGANQLKKMGAUMRFVPUUGLLGQHATMVMMMRMILQQSLVUCLALCSTKUCULYLMKWMEYUENCUSFLLLVEEKRSUWIUULQNNGGLMAILUSPTLEMLSTFUIKULTRKUYHLLYIGUNILHCCWLLFLRSUGNISRCLFISGVLVEVPFLLFRVYSUESCASVLDLAAUMIALKEYIKPMFUIAISUMLUNLNIFVFLATASLNFSEWIFRLHINTPSFSFDSWPUFUGMHLIQKLRKLFARFMNGSSLTLLSFGLMLSVLIVHNLTLSNLHIHUPKUFLEUPVUFPRLGTFPLGUDVSGCUTRLLLLPILLYQYLCSFWICWRUKSUIDPLQEALAKLLIYAAYURLASQLLRHGHFKRLVFFLWLKNLRNTUHCGVTLLGSWSCLLFQLUGCATFANUPKLKGFEEKUGSLFARLRLMSSLUMKSACRFPFYLMILRHHLFLRMRRSQPLVHYQSMLUHSAREQNKKTTHURNPVFLLEKNPLFLVMKNQQVMRRILKRMRMPKRTWMELLHLAHPGYLEMTRUNNSLLNQKERGKSIKKKELPLMMMLWRTWYLVLMKMKICLQATALLPGKMPMLIIIHLQNKTARQSIKQKGUKGINLTP