Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75689.t1 | XP_003601651.2 | 98.1 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 1.60E-262 | 914.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75689.t1 | Q93WX6 | 77.7 | 466 | 101 | 1 | 1 | 466 | 1 | 463 | 1.5e-205 | 716.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75689.t1 | G7JA74 | 98.1 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 1.1e-262 | 914.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene75689 | 0.826665 | 2.40E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene75689 | 0.81257 | 3.97E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene75689 | 0.82846 | 8.88E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene75689 | 0.808311 | 3.30E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene75689 | 0.83817 | 3.37E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene75689 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene75689 | 0.831311 | 1.79E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene75689 | 0.829966 | 3.83E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene75689 | 0.83989 | 1.21E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene75689 | 0.85362 | 2.12E-61 | -1.69E-46 |
| MS.gene050338 | MS.gene75689 | -0.837976 | 3.78E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene75689 | 0.832324 | 1.01E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene75689 | 0.824802 | 6.63E-54 | -1.69E-46 |
| MS.gene050518 | MS.gene75689 | 0.821686 | 3.54E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene75689 | 0.831009 | 2.13E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene75689 | 0.843243 | 1.58E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene75689 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene75689 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene75689 | 0.807579 | 4.72E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene75689 | 0.866126 | 3.58E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene75689 | 0.883165 | 5.65E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene75689 | 0.808404 | 3.15E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene75689 | 0.834941 | 2.24E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene75689 | 0.80779 | 4.25E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene75689 | 0.814832 | 1.26E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene75689 | 0.819279 | 1.26E-52 | -1.69E-46 |
| MS.gene053284 | MS.gene75689 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene75689 | 0.803903 | 2.79E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene75689 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene75689 | 0.832973 | 6.96E-56 | -1.69E-46 |
| MS.gene055134 | MS.gene75689 | -0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene055251 | MS.gene75689 | -0.821479 | 3.95E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene75689 | 0.805677 | 1.19E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene75689 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene75689 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene75689 | 0.887232 | 1.71E-72 | -1.69E-46 |
| MS.gene055750 | MS.gene75689 | 0.887057 | 1.99E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene75689 | 0.904775 | 8.63E-80 | -1.69E-46 |
| MS.gene055776 | MS.gene75689 | 0.844875 | 5.77E-59 | -1.69E-46 |
| MS.gene055849 | MS.gene75689 | 0.857603 | 1.46E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene75689 | 0.850765 | 1.37E-60 | -1.69E-46 |
| MS.gene056266 | MS.gene75689 | 0.831713 | 1.43E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene75689 | 0.846477 | 2.12E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene75689 | 0.826734 | 2.31E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene75689 | 0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene75689 | 0.869921 | 2.16E-66 | -1.69E-46 |
| MS.gene057831 | MS.gene75689 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene75689 | -0.815295 | 9.95E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene75689 | 0.811307 | 7.47E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene75689 | 0.818284 | 2.12E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene75689 | 0.806282 | 8.87E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene75689 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene75689 | 0.81944 | 1.16E-52 | -1.69E-46 |
| MS.gene059079 | MS.gene75689 | 0.865209 | 6.97E-65 | -1.69E-46 |
| MS.gene05912 | MS.gene75689 | 0.811789 | 5.87E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene75689 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene75689 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene75689 | 0.832885 | 7.32E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene75689 | 0.820779 | 5.73E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene75689 | 0.826 | 3.45E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene75689 | 0.860666 | 1.76E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene75689 | 0.822408 | 2.41E-53 | -1.69E-46 |
| MS.gene060823 | MS.gene75689 | -0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene75689 | 0.863799 | 1.92E-64 | -1.69E-46 |
| MS.gene061044 | MS.gene75689 | -0.817951 | 2.53E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene75689 | 0.814388 | 1.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75689.t1 | MTR_3g083980 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
| MS.gene75689.t1 | MTR_3g083980 | 97.846 | 325 | 7 | 0 | 1 | 325 | 1 | 325 | 0.0 | 654 |
| MS.gene75689.t1 | MTR_5g014820 | 25.258 | 388 | 257 | 9 | 77 | 453 | 56 | 421 | 1.29e-24 | 106 |
| MS.gene75689.t1 | MTR_7g111540 | 24.603 | 252 | 161 | 9 | 74 | 307 | 48 | 288 | 2.45e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75689.t1 | AT1G08490 | 77.468 | 466 | 102 | 1 | 1 | 466 | 1 | 463 | 0.0 | 732 |
| MS.gene75689.t1 | AT5G65720 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.31e-21 | 97.4 |
| MS.gene75689.t1 | AT5G65720 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.31e-21 | 97.4 |
| MS.gene75689.t1 | AT5G65720 | 23.920 | 301 | 188 | 8 | 169 | 453 | 17 | 292 | 3.74e-13 | 70.9 |
Find 119 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGATCTTGCAACATTTC+TGG | 0.138943 | 3.3:+70466727 | MS.gene75689:CDS |
| GGCCCATAGATGCGAATATT+TGG | 0.178379 | 3.3:-70466641 | None:intergenic |
| CAACCCCTCCATCGGTATTT+AGG | 0.187810 | 3.3:+70467204 | MS.gene75689:CDS |
| AACTCTTAGTTCTCCCTCTT+TGG | 0.194746 | 3.3:+70462660 | MS.gene75689:CDS |
| AATGATTTCAGATGTATATT+TGG | 0.234059 | 3.3:+70464641 | MS.gene75689:CDS |
| TCCTTCAATTTATCTATATC+TGG | 0.234996 | 3.3:-70463545 | None:intergenic |
| TGGATTCTTATATGGTAAAA+TGG | 0.237622 | 3.3:+70464408 | MS.gene75689:CDS |
| GTCCCAAATATTCGCATCTA+TGG | 0.258743 | 3.3:+70466638 | MS.gene75689:CDS |
| ACAGGCATTGGATTCTTATA+TGG | 0.290323 | 3.3:+70464400 | MS.gene75689:CDS |
| TCAATCTAGTAGCTTATTCT+TGG | 0.296895 | 3.3:+70463049 | MS.gene75689:CDS |
| ACTCTTAGTTCTCCCTCTTT+GGG | 0.324312 | 3.3:+70462661 | MS.gene75689:CDS |
| TTACTTCCTGGTGAAGTATA+GGG | 0.324627 | 3.3:-70462705 | None:intergenic |
| AACCCCTCCATCGGTATTTA+GGG | 0.335796 | 3.3:+70467205 | MS.gene75689:CDS |
| AGTGATTGAACAGCAATAAC+TGG | 0.340667 | 3.3:-70462545 | None:intergenic |
| GCAGCAATTGATTACTTGTC+TGG | 0.346961 | 3.3:+70465227 | MS.gene75689:CDS |
| ATACTTCACCAGGAAGTAAA+TGG | 0.354665 | 3.3:+70462709 | MS.gene75689:CDS |
| TTTACTTCCTGGTGAAGTAT+AGG | 0.375419 | 3.3:-70462706 | None:intergenic |
| ATTGGTGAAGCAATTGGATT+AGG | 0.377119 | 3.3:+70465203 | MS.gene75689:CDS |
| ATTGATTACTTGTCTGGGAT+TGG | 0.379311 | 3.3:+70465233 | MS.gene75689:CDS |
| CCAGCTATTGGTGAAGCAAT+TGG | 0.385593 | 3.3:+70465197 | MS.gene75689:CDS |
| CCTGGTGAAGTATAGGGAAA+TGG | 0.386768 | 3.3:-70462699 | None:intergenic |
| TAACTGGGGCTTGGAAGTTT+CGG | 0.386871 | 3.3:-70462529 | None:intergenic |
| TCTGACACGTGATGTGGTTC+TGG | 0.390059 | 3.3:-70462569 | None:intergenic |
| CAGTGTGCAATATCTCTAAT+AGG | 0.390967 | 3.3:-70464172 | None:intergenic |
| GCCCATAGATGCGAATATTT+GGG | 0.403525 | 3.3:-70466640 | None:intergenic |
| CTGGTGAAGTATAGGGAAAT+GGG | 0.406014 | 3.3:-70462698 | None:intergenic |
| CTATATCTGGAATTTCATCT+TGG | 0.413885 | 3.3:-70463532 | None:intergenic |
| TTACAATTCAAACGTGCATC+GGG | 0.418015 | 3.3:+70462816 | MS.gene75689:CDS |
| CAATCTAGTAGCTTATTCTT+GGG | 0.419995 | 3.3:+70463050 | MS.gene75689:CDS |
| GAGGCTGGAACACCAGCTAT+TGG | 0.422236 | 3.3:+70465185 | MS.gene75689:CDS |
| TTGATTACTTGTCTGGGATT+GGG | 0.425333 | 3.3:+70465234 | MS.gene75689:CDS |
| TTGACGGTTGATGCACGAAC+AGG | 0.429519 | 3.3:-70462619 | None:intergenic |
| TTGACTTCTTTCGAAGGGGC+TGG | 0.434464 | 3.3:-70466662 | None:intergenic |
| CACAAACCTGGACGGAGGTT+CGG | 0.435387 | 3.3:-70464679 | None:intergenic |
| TGCAACATTTCTGGACCAAC+AGG | 0.438009 | 3.3:+70466736 | MS.gene75689:CDS |
| AATGCCTTCACAACAGCTGC+AGG | 0.442651 | 3.3:-70462775 | None:intergenic |
| CTCGTTTGACTTCTTTCGAA+GGG | 0.444579 | 3.3:-70466667 | None:intergenic |
| TTACAGATGTGTGGGCCTAC+AGG | 0.456863 | 3.3:+70464382 | MS.gene75689:intron |
| TTCAGCTACTGCTTGATTGA+CGG | 0.459909 | 3.3:-70462635 | None:intergenic |
| CCTTAGTGTTGTAGAAATAG+AGG | 0.461757 | 3.3:-70467251 | None:intergenic |
| AAGTATAGGGAAATGGGGTC+TGG | 0.471495 | 3.3:-70462692 | None:intergenic |
| TAAATACCGATGGAGGGGTT+GGG | 0.473325 | 3.3:-70467202 | None:intergenic |
| CATGGAGTGGCAATCAGATC+AGG | 0.475274 | 3.3:+70467168 | MS.gene75689:CDS |
| TCCAGATATAGATAAATTGA+AGG | 0.478567 | 3.3:+70463544 | MS.gene75689:CDS |
| AAAATGGAGGCATGGAAGAC+AGG | 0.487304 | 3.3:-70464435 | None:intergenic |
| GAACAGCAATAACTGGGGCT+TGG | 0.497888 | 3.3:-70462538 | None:intergenic |
| ACTCACCTCATACTCATGTA+TGG | 0.501136 | 3.3:-70465264 | None:intergenic |
| AGAAATGTTGCAAGATCAGT+AGG | 0.504435 | 3.3:-70466725 | None:intergenic |
| CAGCAATTGATTACTTGTCT+GGG | 0.508847 | 3.3:+70465228 | MS.gene75689:CDS |
| TACCATACTAGATTTGAGGC+TGG | 0.512947 | 3.3:+70465170 | MS.gene75689:intron |
| GCAAGCCATACATGAGTATG+AGG | 0.513803 | 3.3:+70465259 | MS.gene75689:CDS |
| CTGACAGAAGCCTTTCATAC+AGG | 0.515663 | 3.3:-70466616 | None:intergenic |
| ATGTGTGGGCCTACAGGCAT+TGG | 0.516246 | 3.3:+70464388 | MS.gene75689:CDS |
| CATCATGTTTCAAATGTGCT+TGG | 0.517203 | 3.3:+70463602 | MS.gene75689:CDS |
| CTAAATACCGATGGAGGGGT+TGG | 0.521306 | 3.3:-70467203 | None:intergenic |
| CCATTTCCCTATACTTCACC+AGG | 0.523096 | 3.3:+70462699 | MS.gene75689:CDS |
| GATATTGCACACTGGGCACA+TGG | 0.530497 | 3.3:+70464181 | MS.gene75689:CDS |
| TCCCAAATATTCGCATCTAT+GGG | 0.531604 | 3.3:+70466639 | MS.gene75689:CDS |
| CCAATTGCTTCACCAATAGC+TGG | 0.533136 | 3.3:-70465197 | None:intergenic |
| ACCACATCACGTGTCAGACT+TGG | 0.534095 | 3.3:+70462574 | MS.gene75689:CDS |
| GTGATTGAACAGCAATAACT+GGG | 0.535039 | 3.3:-70462544 | None:intergenic |
| GCACACTGGGCACATGGGGT+TGG | 0.536529 | 3.3:+70464187 | MS.gene75689:CDS |
| GAACAGGGAGATAAGTTAAA+CGG | 0.538325 | 3.3:-70462603 | None:intergenic |
| TGAACATCAACCACCATGTG+TGG | 0.542670 | 3.3:-70464244 | None:intergenic |
| GTTACAATTCAAACGTGCAT+CGG | 0.544500 | 3.3:+70462815 | MS.gene75689:CDS |
| CTTATGCCGAACCTCCGTCC+AGG | 0.545005 | 3.3:+70464673 | MS.gene75689:CDS |
| GGAAATGGGGTCTGGTAGTG+TGG | 0.550619 | 3.3:-70462684 | None:intergenic |
| TGGGTACATACCTGTATGAA+AGG | 0.550622 | 3.3:+70466606 | MS.gene75689:CDS |
| GCATTGCAAGACTATTATGA+AGG | 0.553126 | 3.3:+70462793 | MS.gene75689:CDS |
| TATTAGAGATATTGCACACT+GGG | 0.555135 | 3.3:+70464174 | MS.gene75689:CDS |
| CCTCTATTTCTACAACACTA+AGG | 0.555763 | 3.3:+70467251 | MS.gene75689:CDS |
| TCTTGTTGCTTCTTCTCACA+AGG | 0.556164 | 3.3:+70464285 | MS.gene75689:CDS |
| AATCTAGTAGCTTATTCTTG+GGG | 0.557727 | 3.3:+70463051 | MS.gene75689:CDS |
| CAACAAGAAAATCAGCATCA+AGG | 0.558160 | 3.3:-70464270 | None:intergenic |
| AGAAGTTGACCGTGTCATGA+AGG | 0.561968 | 3.3:-70467299 | None:intergenic |
| GAAGTTGACCGTGTCATGAA+GGG | 0.567742 | 3.3:-70467298 | None:intergenic |
| GAAGCCTGCAGCTGTTGTGA+AGG | 0.567977 | 3.3:+70462771 | MS.gene75689:CDS |
| GCTCGTTTGACTTCTTTCGA+AGG | 0.577103 | 3.3:-70466668 | None:intergenic |
| CTGGTAGTGTGGCCCAAAGA+GGG | 0.578324 | 3.3:-70462673 | None:intergenic |
| TGACCCCTAAATACCGATGG+AGG | 0.582901 | 3.3:-70467209 | None:intergenic |
| ACCCCTAAATACCGATGGAG+GGG | 0.591422 | 3.3:-70467207 | None:intergenic |
| CATGTGTGGAACACTCTGGC+AGG | 0.593828 | 3.3:-70464230 | None:intergenic |
| GGCTTGTCAAATTTAAAACA+AGG | 0.594239 | 3.3:+70463072 | MS.gene75689:CDS |
| GACCCCTAAATACCGATGGA+GGG | 0.595603 | 3.3:-70467208 | None:intergenic |
| ATCACAGCGCAATTGTTCCA+TGG | 0.596198 | 3.3:+70463459 | MS.gene75689:CDS |
| CTGCCAGAGTGTTCCACACA+TGG | 0.600132 | 3.3:+70464231 | MS.gene75689:CDS |
| TCTGGTAGTGTGGCCCAAAG+AGG | 0.600966 | 3.3:-70462674 | None:intergenic |
| TGACCGTGTCATGAAGGGCA+TGG | 0.603142 | 3.3:-70467293 | None:intergenic |
| CATTGACCCCTAAATACCGA+TGG | 0.603227 | 3.3:-70467212 | None:intergenic |
| TATCCATGCCCTTCATGACA+CGG | 0.605173 | 3.3:+70467290 | MS.gene75689:CDS |
| TCGTTTGACTTCTTTCGAAG+GGG | 0.606212 | 3.3:-70466666 | None:intergenic |
| AACCTGTCTTACAGATGTGT+GGG | 0.606697 | 3.3:+70464374 | MS.gene75689:intron |
| GAACCTGTCTTACAGATGTG+TGG | 0.607400 | 3.3:+70464373 | MS.gene75689:intron |
| ATTGTGCCCAACCCCTCCAT+CGG | 0.607814 | 3.3:+70467196 | MS.gene75689:CDS |
| AAAGAGGGAGAACTAAGAGT+TGG | 0.613517 | 3.3:-70462658 | None:intergenic |
| TATTGCACACTGGGCACATG+GGG | 0.615050 | 3.3:+70464183 | MS.gene75689:CDS |
| CCACCATGTGTGGAACACTC+TGG | 0.619780 | 3.3:-70464234 | None:intergenic |
| TGACGGTTGATGCACGAACA+GGG | 0.628972 | 3.3:-70462618 | None:intergenic |
| GATGGAGGGGTTGGGCACAA+TGG | 0.630626 | 3.3:-70467194 | None:intergenic |
| AAATTTAAAACAAGGAGATG+AGG | 0.633993 | 3.3:+70463080 | MS.gene75689:CDS |
| TATTTATGGATGTAGTGCAA+AGG | 0.635359 | 3.3:+70462927 | MS.gene75689:intron |
| GCCAAGTCTGACACGTGATG+TGG | 0.638545 | 3.3:-70462575 | None:intergenic |
| CTATTAGAGATATTGCACAC+TGG | 0.643145 | 3.3:+70464173 | MS.gene75689:CDS |
| ATATTGCACACTGGGCACAT+GGG | 0.643244 | 3.3:+70464182 | MS.gene75689:CDS |
| AGCTGATTCATACTCGTCTG+TGG | 0.647061 | 3.3:-70462950 | None:intergenic |
| ACGAGTATGAATCAGCTAGA+CGG | 0.649988 | 3.3:+70462956 | MS.gene75689:CDS |
| ATCGGGGCATACATTACTTG+AGG | 0.654297 | 3.3:+70462833 | MS.gene75689:CDS |
| TGGTGAAGTATAGGGAAATG+GGG | 0.664059 | 3.3:-70462697 | None:intergenic |
| TATAAGAATCCAATGCCTGT+AGG | 0.671673 | 3.3:-70464397 | None:intergenic |
| GTATGAATCAGCTAGACGGA+AGG | 0.672338 | 3.3:+70462960 | MS.gene75689:CDS |
| ACCCCTCCATCGGTATTTAG+GGG | 0.674227 | 3.3:+70467206 | MS.gene75689:CDS |
| CTATTTCTACAACACTAAGG+AGG | 0.678567 | 3.3:+70467254 | MS.gene75689:CDS |
| GAAATGTTGCAAGATCAGTA+GGG | 0.688737 | 3.3:-70466724 | None:intergenic |
| ATGGAGGCATGGAAGACAGG+AGG | 0.692069 | 3.3:-70464432 | None:intergenic |
| CCAGAGTGTTCCACACATGG+TGG | 0.696122 | 3.3:+70464234 | MS.gene75689:CDS |
| AAGTTCACAAACCTGGACGG+AGG | 0.708907 | 3.3:-70464684 | None:intergenic |
| TACAATTCAAACGTGCATCG+GGG | 0.710508 | 3.3:+70462817 | MS.gene75689:CDS |
| CAGGGAGATAAGTTAAACGG+CGG | 0.749242 | 3.3:-70462600 | None:intergenic |
| TGATTGAACAGCAATAACTG+GGG | 0.771247 | 3.3:-70462543 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACAATTTTTTATGAAAA+AGG | + | chr3.3:70466830-70466849 | MS.gene75689:intron | 10.0% |
| !!! | TTATTCATAAACTTTTATAT+AGG | + | chr3.3:70466915-70466934 | MS.gene75689:intron | 10.0% |
| !! | AAAACAAAATCTTATTAACA+TGG | - | chr3.3:70464567-70464586 | None:intergenic | 15.0% |
| !! | ATCATGTTTAAAAATTTAGA+TGG | - | chr3.3:70463205-70463224 | None:intergenic | 15.0% |
| !! | ATCTTAAAAATGATATACAT+TGG | + | chr3.3:70464733-70464752 | MS.gene75689:intron | 15.0% |
| !! | GGTTATATTAAATTTAGAAA+AGG | - | chr3.3:70465036-70465055 | None:intergenic | 15.0% |
| !! | TATAATAACTTACCTAAAAA+TGG | - | chr3.3:70464454-70464473 | None:intergenic | 15.0% |
| !! | TCATGTTTAAAAATTTAGAT+GGG | - | chr3.3:70463204-70463223 | None:intergenic | 15.0% |
| !!! | ATTATTGTGTTTGTTAAATT+TGG | + | chr3.3:70462861-70462880 | MS.gene75689:intron | 15.0% |
| !!! | TGTATATCATTTTTAAGATA+AGG | - | chr3.3:70464732-70464751 | None:intergenic | 15.0% |
| !! | AAAATCATTAATTTAGCTAG+TGG | - | chr3.3:70466227-70466246 | None:intergenic | 20.0% |
| !! | AATGATTTCAGATGTATATT+TGG | + | chr3.3:70464641-70464660 | MS.gene75689:CDS | 20.0% |
| !! | AATTATAACGATAACATTGA+AGG | - | chr3.3:70466200-70466219 | None:intergenic | 20.0% |
| !! | ATCAAATGTGATATTGAAAT+AGG | + | chr3.3:70463279-70463298 | MS.gene75689:intron | 20.0% |
| !! | ATTATAACGATAACATTGAA+GGG | - | chr3.3:70466199-70466218 | None:intergenic | 20.0% |
| !! | ATTTCCAATATTCAACTATA+AGG | + | chr3.3:70463870-70463889 | MS.gene75689:intron | 20.0% |
| !! | CATGTTTAAAAATTTAGATG+GGG | - | chr3.3:70463203-70463222 | None:intergenic | 20.0% |
| !! | GTATCTTATTATTATATCTG+AGG | + | chr3.3:70465141-70465160 | MS.gene75689:intron | 20.0% |
| !! | TTTAGGTAAGTTATTATACA+CGG | + | chr3.3:70464456-70464475 | MS.gene75689:intron | 20.0% |
| !! | TTTATGTGCACAATTATTTA+TGG | + | chr3.3:70462913-70462932 | MS.gene75689:intron | 20.0% |
| !! | TTTCCAATATTCAACTATAA+GGG | + | chr3.3:70463871-70463890 | MS.gene75689:intron | 20.0% |
| !!! | ACCAAGTTTAAATGTTTTTA+GGG | - | chr3.3:70463979-70463998 | None:intergenic | 20.0% |
| !!! | ATTTCTCTAGAATAACTTAA+AGG | - | chr3.3:70466885-70466904 | None:intergenic | 20.0% |
| !!! | TGTTAAATTTGGAATTACAT+TGG | + | chr3.3:70462872-70462891 | MS.gene75689:intron | 20.0% |
| !!! | TTGTGCATATTTTTAAGATT+CGG | + | chr3.3:70463231-70463250 | MS.gene75689:intron | 20.0% |
| !!! | TTTATAGGTTTTGACATTAA+CGG | + | chr3.3:70463706-70463725 | MS.gene75689:intron | 20.0% |
| !!! | TTTTACATGAGCATATTTAT+TGG | - | chr3.3:70463392-70463411 | None:intergenic | 20.0% |
| ! | AAAAACCATTGAAACAATTG+GGG | - | chr3.3:70464035-70464054 | None:intergenic | 25.0% |
| ! | AAATACAAGAATAAACCACA+GGG | - | chr3.3:70465706-70465725 | None:intergenic | 25.0% |
| ! | AAATCAACTAAATCATAACG+AGG | - | chr3.3:70465501-70465520 | None:intergenic | 25.0% |
| ! | AAGATTCACTTCTAATCATT+TGG | + | chr3.3:70465757-70465776 | MS.gene75689:intron | 25.0% |
| ! | AAGTTCTATTCCTTTATGTT+TGG | + | chr3.3:70463353-70463372 | MS.gene75689:intron | 25.0% |
| ! | AATAACTTACCTAAAAATGG+AGG | - | chr3.3:70464451-70464470 | None:intergenic | 25.0% |
| ! | AATAAGTTAAAAACAACCCA+TGG | + | chr3.3:70466938-70466957 | MS.gene75689:intron | 25.0% |
| ! | AATATACATTAATGAGGTTG+AGG | - | chr3.3:70466149-70466168 | None:intergenic | 25.0% |
| ! | ACATCATCAAAATTCAAGAA+AGG | - | chr3.3:70467137-70467156 | None:intergenic | 25.0% |
| ! | ACATGAACAACTAGTTAAAA+TGG | + | chr3.3:70464504-70464523 | MS.gene75689:intron | 25.0% |
| ! | ACCCTAAAAACATTTAAACT+TGG | + | chr3.3:70463975-70463994 | MS.gene75689:intron | 25.0% |
| ! | AGAAAAAATCCTGTTTGTTT+AGG | + | chr3.3:70464539-70464558 | MS.gene75689:intron | 25.0% |
| ! | AGATTCACTTCTAATCATTT+GGG | + | chr3.3:70465758-70465777 | MS.gene75689:intron | 25.0% |
| ! | ATTGACAACGATCATTTAAA+TGG | - | chr3.3:70464948-70464967 | None:intergenic | 25.0% |
| ! | GAAAAACCATTGAAACAATT+GGG | - | chr3.3:70464036-70464055 | None:intergenic | 25.0% |
| ! | GATACAATACAAGTAATTGA+TGG | - | chr3.3:70465126-70465145 | None:intergenic | 25.0% |
| ! | TAAATACAAGAATAAACCAC+AGG | - | chr3.3:70465707-70465726 | None:intergenic | 25.0% |
| ! | TAATGACAATCCAAACATAA+AGG | - | chr3.3:70463366-70463385 | None:intergenic | 25.0% |
| ! | TAATTGATTACAGACTAAGA+AGG | - | chr3.3:70467054-70467073 | None:intergenic | 25.0% |
| ! | TAATTGTGCACATAAACATT+TGG | - | chr3.3:70462909-70462928 | None:intergenic | 25.0% |
| ! | TCCAGATATAGATAAATTGA+AGG | + | chr3.3:70463544-70463563 | MS.gene75689:CDS | 25.0% |
| ! | TCCTTCAATTTATCTATATC+TGG | - | chr3.3:70463548-70463567 | None:intergenic | 25.0% |
| ! | TGAAAAACCATTGAAACAAT+TGG | - | chr3.3:70464037-70464056 | None:intergenic | 25.0% |
| ! | TGGATTCTTATATGGTAAAA+TGG | + | chr3.3:70464408-70464427 | MS.gene75689:CDS | 25.0% |
| ! | TTACATACACTCATATAAAG+AGG | + | chr3.3:70463847-70463866 | MS.gene75689:intron | 25.0% |
| ! | TTATTAGGTGAAAACAATGT+AGG | + | chr3.3:70466375-70466394 | MS.gene75689:intron | 25.0% |
| ! | TTTATAGTCAATAAGACTGA+AGG | - | chr3.3:70465293-70465312 | None:intergenic | 25.0% |
| !! | AAAAATGATATACATTGGCT+TGG | + | chr3.3:70464738-70464757 | MS.gene75689:intron | 25.0% |
| !! | AAATTTAAAACAAGGAGATG+AGG | + | chr3.3:70463080-70463099 | MS.gene75689:CDS | 25.0% |
| !! | AGCTTAACTACAAGTTATTT+TGG | - | chr3.3:70465931-70465950 | None:intergenic | 25.0% |
| !! | ATTTTACCATACTAGATTTG+AGG | + | chr3.3:70465166-70465185 | MS.gene75689:intron | 25.0% |
| !! | CACCAAGTTTAAATGTTTTT+AGG | - | chr3.3:70463980-70463999 | None:intergenic | 25.0% |
| !! | GCTTTGAATATACATTAATG+AGG | - | chr3.3:70466155-70466174 | None:intergenic | 25.0% |
| !! | TACTAAATTGCCCAAATTTT+CGG | + | chr3.3:70467072-70467091 | MS.gene75689:intron | 25.0% |
| !! | TATGACATCCAAATTTTCAT+AGG | + | chr3.3:70466577-70466596 | MS.gene75689:intron | 25.0% |
| !! | TTGGAATTACATTGGTAATT+TGG | + | chr3.3:70462880-70462899 | MS.gene75689:intron | 25.0% |
| !! | TTTTGTAGCTAATACATTTC+CGG | + | chr3.3:70464583-70464602 | MS.gene75689:intron | 25.0% |
| !!! | AAAATGATATACATTGGCTT+GGG | + | chr3.3:70464739-70464758 | MS.gene75689:intron | 25.0% |
| !!! | TGGTAGATCGAATAATTTTT+TGG | - | chr3.3:70464928-70464947 | None:intergenic | 25.0% |
| !!! | TTTTGGTTATAGAATCCTAT+GGG | - | chr3.3:70464911-70464930 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTATAGAATCCTA+TGG | - | chr3.3:70464912-70464931 | None:intergenic | 25.0% |
| AAAACCATTGAAACAATTGG+GGG | - | chr3.3:70464034-70464053 | None:intergenic | 30.0% | |
| AAAAGTTTCTGTATTCGTAC+TGG | - | chr3.3:70463790-70463809 | None:intergenic | 30.0% | |
| AAATGACTGTAGGTTATGAA+TGG | - | chr3.3:70465057-70465076 | None:intergenic | 30.0% | |
| AACAAGAAAATGCATATAGC+TGG | - | chr3.3:70466783-70466802 | None:intergenic | 30.0% | |
| AAGAGGATAGTAAAGTAAAC+GGG | - | chr3.3:70465382-70465401 | None:intergenic | 30.0% | |
| AATCTAGTAGCTTATTCTTG+GGG | + | chr3.3:70463051-70463070 | MS.gene75689:CDS | 30.0% | |
| ACTAGTTGTTCATGTTTGAT+AGG | - | chr3.3:70464499-70464518 | None:intergenic | 30.0% | |
| AGAAAACTAGAGTAATTCAC+AGG | + | chr3.3:70465312-70465331 | MS.gene75689:intron | 30.0% | |
| AGAGTTTCCATTTCTTATCT+TGG | + | chr3.3:70464987-70465006 | MS.gene75689:intron | 30.0% | |
| AGTCCCTTATAGTTGAATAT+TGG | - | chr3.3:70463877-70463896 | None:intergenic | 30.0% | |
| AGTGTCTATGTCATGAAATA+AGG | + | chr3.3:70467007-70467026 | MS.gene75689:intron | 30.0% | |
| ATTAACTAATGACATGTCCA+TGG | - | chr3.3:70466958-70466977 | None:intergenic | 30.0% | |
| CAATCAATACATTAAGTGCT+TGG | - | chr3.3:70465634-70465653 | None:intergenic | 30.0% | |
| CAATCTAGTAGCTTATTCTT+GGG | + | chr3.3:70463050-70463069 | MS.gene75689:CDS | 30.0% | |
| CAATTAGTAGCTCAAAAAGT+TGG | + | chr3.3:70463482-70463501 | MS.gene75689:CDS | 30.0% | |
| CATTAGATGGTTAAGCAAAT+TGG | - | chr3.3:70465602-70465621 | None:intergenic | 30.0% | |
| CCAATTACTACCGAAAATTT+GGG | - | chr3.3:70467085-70467104 | None:intergenic | 30.0% | |
| CTAACACTCACTTTCTTATT+AGG | + | chr3.3:70466360-70466379 | MS.gene75689:intron | 30.0% | |
| CTAACACTTATTCTCTTGTT+GGG | - | chr3.3:70466456-70466475 | None:intergenic | 30.0% | |
| CTGATCAAGTTAAACATTGT+CGG | - | chr3.3:70465986-70466005 | None:intergenic | 30.0% | |
| GAAAAAAAAGTTCACAAACC+TGG | - | chr3.3:70464694-70464713 | None:intergenic | 30.0% | |
| GAAGAAGTAAAACAACAATC+AGG | - | chr3.3:70466083-70466102 | None:intergenic | 30.0% | |
| GAAGAGGATAGTAAAGTAAA+CGG | - | chr3.3:70465383-70465402 | None:intergenic | 30.0% | |
| GAGTTTCCATTTCTTATCTT+GGG | + | chr3.3:70464988-70465007 | MS.gene75689:intron | 30.0% | |
| TAAAGGAATAGAACTTCAAC+CGG | - | chr3.3:70463349-70463368 | None:intergenic | 30.0% | |
| TATTAGAGATATTGCACACT+GGG | + | chr3.3:70464174-70464193 | MS.gene75689:CDS | 30.0% | |
| TATTTATGGATGTAGTGCAA+AGG | + | chr3.3:70462927-70462946 | MS.gene75689:intron | 30.0% | |
| TATTTCATCTTCTTACCTGT+TGG | - | chr3.3:70466754-70466773 | None:intergenic | 30.0% | |
| TCAATCTAGTAGCTTATTCT+TGG | + | chr3.3:70463049-70463068 | MS.gene75689:CDS | 30.0% | |
| TCCAATTACTACCGAAAATT+TGG | - | chr3.3:70467086-70467105 | None:intergenic | 30.0% | |
| TCTAACACTTATTCTCTTGT+TGG | - | chr3.3:70466457-70466476 | None:intergenic | 30.0% | |
| TTAACTAATGACATGTCCAT+GGG | - | chr3.3:70466957-70466976 | None:intergenic | 30.0% | |
| TTGTTGGGTTAAATCAATGT+AGG | - | chr3.3:70466441-70466460 | None:intergenic | 30.0% | |
| TTTGGTTATAGAATCCTATG+GGG | - | chr3.3:70464910-70464929 | None:intergenic | 30.0% | |
| ! | ATGATGTATCATTTTCAGCA+TGG | + | chr3.3:70467150-70467169 | MS.gene75689:intron | 30.0% |
| ! | CAAAATCAGTTTTCATACAG+AGG | + | chr3.3:70466305-70466324 | MS.gene75689:intron | 30.0% |
| ! | CTATATCTGGAATTTCATCT+TGG | - | chr3.3:70463535-70463554 | None:intergenic | 30.0% |
| ! | GAATTACATTGGTAATTTGG+AGG | + | chr3.3:70462883-70462902 | MS.gene75689:intron | 30.0% |
| ! | GGCTTGTCAAATTTAAAACA+AGG | + | chr3.3:70463072-70463091 | MS.gene75689:CDS | 30.0% |
| !! | GAAATAGGAGTTTTAATACC+AGG | + | chr3.3:70463294-70463313 | MS.gene75689:intron | 30.0% |
| !! | GAGTAAAAGTACTATCATTG+TGG | - | chr3.3:70464079-70464098 | None:intergenic | 30.0% |
| !! | GGTATCATCTTTTGAAAATC+TGG | + | chr3.3:70465572-70465591 | MS.gene75689:intron | 30.0% |
| !! | TTGGCTTTATTGTCATTAGA+TGG | - | chr3.3:70465615-70465634 | None:intergenic | 30.0% |
| !!! | ATGTTTGGATTAGCGTATTT+TGG | + | chr3.3:70463146-70463165 | MS.gene75689:intron | 30.0% |
| AAAAAATTAGCACTGTGAGG+CGG | - | chr3.3:70465084-70465103 | None:intergenic | 35.0% | |
| AAAAAGTTCACAAACCTGGA+CGG | - | chr3.3:70464690-70464709 | None:intergenic | 35.0% | |
| AAAGGAATAGAACTTCAACC+GGG | - | chr3.3:70463348-70463367 | None:intergenic | 35.0% | |
| AGAAATGTTGCAAGATCAGT+AGG | - | chr3.3:70466728-70466747 | None:intergenic | 35.0% | |
| AGCAAAAAATTAGCACTGTG+AGG | - | chr3.3:70465087-70465106 | None:intergenic | 35.0% | |
| AGTGATTGAACAGCAATAAC+TGG | - | chr3.3:70462548-70462567 | None:intergenic | 35.0% | |
| ATACTTCACCAGGAAGTAAA+TGG | + | chr3.3:70462709-70462728 | MS.gene75689:CDS | 35.0% | |
| ATCAGTCCCAAGATAAGAAA+TGG | - | chr3.3:70464997-70465016 | None:intergenic | 35.0% | |
| ATTGGAATAGCTGTTGAACT+TGG | + | chr3.3:70467100-70467119 | MS.gene75689:intron | 35.0% | |
| ATTGGTGAAGCAATTGGATT+AGG | + | chr3.3:70465203-70465222 | MS.gene75689:CDS | 35.0% | |
| CAACAAGAAAATCAGCATCA+AGG | - | chr3.3:70464273-70464292 | None:intergenic | 35.0% | |
| CAACAATCAGGATGACAAAA+TGG | - | chr3.3:70466071-70466090 | None:intergenic | 35.0% | |
| CAGCAATTGATTACTTGTCT+GGG | + | chr3.3:70465228-70465247 | MS.gene75689:CDS | 35.0% | |
| CAGTGTGCAATATCTCTAAT+AGG | - | chr3.3:70464175-70464194 | None:intergenic | 35.0% | |
| CATCATGTTTCAAATGTGCT+TGG | + | chr3.3:70463602-70463621 | MS.gene75689:CDS | 35.0% | |
| CCTTAGTGTTGTAGAAATAG+AGG | - | chr3.3:70467254-70467273 | None:intergenic | 35.0% | |
| CTATCATTGTGGAAAGTAAG+AGG | - | chr3.3:70464068-70464087 | None:intergenic | 35.0% | |
| CTATTAGAGATATTGCACAC+TGG | + | chr3.3:70464173-70464192 | MS.gene75689:CDS | 35.0% | |
| GAAATGTTGCAAGATCAGTA+GGG | - | chr3.3:70466727-70466746 | None:intergenic | 35.0% | |
| GAACAGGGAGATAAGTTAAA+CGG | - | chr3.3:70462606-70462625 | None:intergenic | 35.0% | |
| GCATTGCAAGACTATTATGA+AGG | + | chr3.3:70462793-70462812 | MS.gene75689:CDS | 35.0% | |
| GTGATTGAACAGCAATAACT+GGG | - | chr3.3:70462547-70462566 | None:intergenic | 35.0% | |
| GTTACAATTCAAACGTGCAT+CGG | + | chr3.3:70462815-70462834 | MS.gene75689:CDS | 35.0% | |
| TACTGATCTTGCAACATTTC+TGG | + | chr3.3:70466727-70466746 | MS.gene75689:CDS | 35.0% | |
| TACTTTACTATCCTCTTCTG+TGG | + | chr3.3:70465385-70465404 | MS.gene75689:intron | 35.0% | |
| TAGGTCCTACTACTTTATGT+GGG | + | chr3.3:70466394-70466413 | MS.gene75689:intron | 35.0% | |
| TATAAGAATCCAATGCCTGT+AGG | - | chr3.3:70464400-70464419 | None:intergenic | 35.0% | |
| TATTGGGTCTCAATATGCAT+AGG | - | chr3.3:70463946-70463965 | None:intergenic | 35.0% | |
| TCAAAAGATGATACCCATGA+AGG | - | chr3.3:70465567-70465586 | None:intergenic | 35.0% | |
| TCCCAAATATTCGCATCTAT+GGG | + | chr3.3:70466639-70466658 | MS.gene75689:CDS | 35.0% | |
| TGATTGAACAGCAATAACTG+GGG | - | chr3.3:70462546-70462565 | None:intergenic | 35.0% | |
| TTACAATTCAAACGTGCATC+GGG | + | chr3.3:70462816-70462835 | MS.gene75689:CDS | 35.0% | |
| TTACTTCCTGGTGAAGTATA+GGG | - | chr3.3:70462708-70462727 | None:intergenic | 35.0% | |
| TTTACTTCCTGGTGAAGTAT+AGG | - | chr3.3:70462709-70462728 | None:intergenic | 35.0% | |
| ! | AAATTTTCATAGGTCGAGCT+GGG | + | chr3.3:70466587-70466606 | MS.gene75689:intron | 35.0% |
| ! | ATTGATTACTTGTCTGGGAT+TGG | + | chr3.3:70465233-70465252 | MS.gene75689:CDS | 35.0% |
| ! | CATGTTTGCTAAGTACTAGT+TGG | - | chr3.3:70463918-70463937 | None:intergenic | 35.0% |
| ! | CCCAAATTTTCGGTAGTAAT+TGG | + | chr3.3:70467082-70467101 | MS.gene75689:intron | 35.0% |
| ! | TTGATTACTTGTCTGGGATT+GGG | + | chr3.3:70465234-70465253 | MS.gene75689:CDS | 35.0% |
| ! | TTTTCATACAGAGGATTGCT+TGG | + | chr3.3:70466314-70466333 | MS.gene75689:intron | 35.0% |
| ! | TTTTGACATTAACGGTCTTC+TGG | + | chr3.3:70463714-70463733 | MS.gene75689:intron | 35.0% |
| ! | TTTTGAGCTACTAATTGCCA+TGG | - | chr3.3:70463479-70463498 | None:intergenic | 35.0% |
| !! | ACAGGCATTGGATTCTTATA+TGG | + | chr3.3:70464400-70464419 | MS.gene75689:CDS | 35.0% |
| !! | ATAGGAGTTTTAATACCAGG+AGG | + | chr3.3:70463297-70463316 | MS.gene75689:intron | 35.0% |
| !! | ATTGGTATTTTGAACCCCAT+AGG | + | chr3.3:70464893-70464912 | MS.gene75689:intron | 35.0% |
| !! | ATTTCAACTTGCTGCATGTT+TGG | + | chr3.3:70463131-70463150 | MS.gene75689:intron | 35.0% |
| !! | CCTCTATTTCTACAACACTA+AGG | + | chr3.3:70467251-70467270 | MS.gene75689:CDS | 35.0% |
| !! | CTATTTCTACAACACTAAGG+AGG | + | chr3.3:70467254-70467273 | MS.gene75689:CDS | 35.0% |
| !! | TGAAGCTTTTTCTCCTTCAT+GGG | + | chr3.3:70465551-70465570 | MS.gene75689:intron | 35.0% |
| !! | TTAAGATTCGGAGAGTGTTA+AGG | + | chr3.3:70463243-70463262 | MS.gene75689:intron | 35.0% |
| !!! | AAATGTTTTTAGGGTCACGT+TGG | - | chr3.3:70463970-70463989 | None:intergenic | 35.0% |
| !!! | AATGTTTTTAGGGTCACGTT+GGG | - | chr3.3:70463969-70463988 | None:intergenic | 35.0% |
| AAAGAGGGAGAACTAAGAGT+TGG | - | chr3.3:70462661-70462680 | None:intergenic | 40.0% | |
| AAAGCTTCAGCATCTACAGA+AGG | - | chr3.3:70465540-70465559 | None:intergenic | 40.0% | |
| AACATGGTGCCTAAACAAAC+AGG | - | chr3.3:70464551-70464570 | None:intergenic | 40.0% | |
| AACCTGTCTTACAGATGTGT+GGG | + | chr3.3:70464374-70464393 | MS.gene75689:intron | 40.0% | |
| ACCTATAAAGTTAACCCAGC+AGG | - | chr3.3:70463695-70463714 | None:intergenic | 40.0% | |
| ACGAGTATGAATCAGCTAGA+CGG | + | chr3.3:70462956-70462975 | MS.gene75689:CDS | 40.0% | |
| ACTCACCTCATACTCATGTA+TGG | - | chr3.3:70465267-70465286 | None:intergenic | 40.0% | |
| AGAAAGCTGAAGAGGATCAA+TGG | + | chr3.3:70464795-70464814 | MS.gene75689:intron | 40.0% | |
| CAGAAGCTACAGAAAAGCAA+AGG | - | chr3.3:70464147-70464166 | None:intergenic | 40.0% | |
| CAGCTCGACCTATGAAAATT+TGG | - | chr3.3:70466588-70466607 | None:intergenic | 40.0% | |
| CCTGAAACAAGCAAAAGATG+AGG | - | chr3.3:70464612-70464631 | None:intergenic | 40.0% | |
| CTGGTGAAGTATAGGGAAAT+GGG | - | chr3.3:70462701-70462720 | None:intergenic | 40.0% | |
| CTTACCTAAAAATGGAGGCA+TGG | - | chr3.3:70464446-70464465 | None:intergenic | 40.0% | |
| GAATAGCTGTTGAACTTGGT+TGG | + | chr3.3:70467104-70467123 | MS.gene75689:intron | 40.0% | |
| GCAGCAATTGATTACTTGTC+TGG | + | chr3.3:70465227-70465246 | MS.gene75689:CDS | 40.0% | |
| GCCCATAGATGCGAATATTT+GGG | - | chr3.3:70466643-70466662 | None:intergenic | 40.0% | |
| GTAGGTCCTACTACTTTATG+TGG | + | chr3.3:70466393-70466412 | MS.gene75689:intron | 40.0% | |
| GTCCCAAATATTCGCATCTA+TGG | + | chr3.3:70466638-70466657 | MS.gene75689:CDS | 40.0% | |
| TAATACCAGGAGGAGACATT+GGG | + | chr3.3:70463307-70463326 | MS.gene75689:intron | 40.0% | |
| TACAATTCAAACGTGCATCG+GGG | + | chr3.3:70462817-70462836 | MS.gene75689:CDS | 40.0% | |
| TCAGCTTTCTTTCCTACACA+GGG | - | chr3.3:70464785-70464804 | None:intergenic | 40.0% | |
| TGATCGTTGTCAATATCAGC+CGG | + | chr3.3:70464954-70464973 | MS.gene75689:intron | 40.0% | |
| TGGCTCTTGATGTTAGTCAT+TGG | + | chr3.3:70464875-70464894 | MS.gene75689:intron | 40.0% | |
| TGGGTACATACCTGTATGAA+AGG | + | chr3.3:70466606-70466625 | MS.gene75689:CDS | 40.0% | |
| TGGTGAAGTATAGGGAAATG+GGG | - | chr3.3:70462700-70462719 | None:intergenic | 40.0% | |
| TGTAGGAAAGAAAGCTGAAG+AGG | + | chr3.3:70464787-70464806 | MS.gene75689:intron | 40.0% | |
| TTAATACCAGGAGGAGACAT+TGG | + | chr3.3:70463306-70463325 | MS.gene75689:intron | 40.0% | |
| TTATCTTGGGACTGATACTC+TGG | + | chr3.3:70465001-70465020 | MS.gene75689:intron | 40.0% | |
| TTCAGCATCTACAGAAGGTA+TGG | - | chr3.3:70465535-70465554 | None:intergenic | 40.0% | |
| TTCAGCTACTGCTTGATTGA+CGG | - | chr3.3:70462638-70462657 | None:intergenic | 40.0% | |
| TTCAGCTTTCTTTCCTACAC+AGG | - | chr3.3:70464786-70464805 | None:intergenic | 40.0% | |
| TTCCAGCCTCAAATCTAGTA+TGG | - | chr3.3:70465175-70465194 | None:intergenic | 40.0% | |
| TTCTAATCATTTGGGAGCTG+TGG | + | chr3.3:70465766-70465785 | MS.gene75689:intron | 40.0% | |
| TTGAATCAACGTTGCATCGA+GGG | + | chr3.3:70463755-70463774 | MS.gene75689:intron | 40.0% | |
| ! | AACTCTTAGTTCTCCCTCTT+TGG | + | chr3.3:70462660-70462679 | MS.gene75689:CDS | 40.0% |
| ! | ACTCTTAGTTCTCCCTCTTT+GGG | + | chr3.3:70462661-70462680 | MS.gene75689:CDS | 40.0% |
| ! | AGAATAAACCACAGGGTGTT+TGG | - | chr3.3:70465699-70465718 | None:intergenic | 40.0% |
| ! | AGGTCCAGCACTTTGAAAAT+GGG | - | chr3.3:70466421-70466440 | None:intergenic | 40.0% |
| ! | CAAATTTTCATAGGTCGAGC+TGG | + | chr3.3:70466586-70466605 | MS.gene75689:intron | 40.0% |
| ! | CATCTTTTGCTTGTTTCAGG+CGG | + | chr3.3:70464612-70464631 | MS.gene75689:intron | 40.0% |
| ! | CCTCATCTTTTGCTTGTTTC+AGG | + | chr3.3:70464609-70464628 | MS.gene75689:intron | 40.0% |
| ! | CTCGTTTGACTTCTTTCGAA+GGG | - | chr3.3:70466670-70466689 | None:intergenic | 40.0% |
| ! | GTATCATTTTCAGCATGGAG+TGG | + | chr3.3:70467155-70467174 | MS.gene75689:intron | 40.0% |
| ! | TACAGAAGGTATGGCATTTG+AGG | - | chr3.3:70465526-70465545 | None:intergenic | 40.0% |
| ! | TACCATACTAGATTTGAGGC+TGG | + | chr3.3:70465170-70465189 | MS.gene75689:intron | 40.0% |
| ! | TAGGTCCAGCACTTTGAAAA+TGG | - | chr3.3:70466422-70466441 | None:intergenic | 40.0% |
| ! | TCGTTTGACTTCTTTCGAAG+GGG | - | chr3.3:70466669-70466688 | None:intergenic | 40.0% |
| ! | TCTTGTTGCTTCTTCTCACA+AGG | + | chr3.3:70464285-70464304 | MS.gene75689:CDS | 40.0% |
| !! | AGTAACTTGTTACACTGGTC+TGG | - | chr3.3:70464353-70464372 | None:intergenic | 40.0% |
| !! | ATGATATACATTGGCTTGGG+TGG | + | chr3.3:70464742-70464761 | MS.gene75689:intron | 40.0% |
| !! | CTGAAGCTTTTTCTCCTTCA+TGG | + | chr3.3:70465550-70465569 | MS.gene75689:intron | 40.0% |
| !! | GGTTCAGTAACTTGTTACAC+TGG | - | chr3.3:70464358-70464377 | None:intergenic | 40.0% |
| !! | GTTTTGAGCCATTTACTTCC+TGG | - | chr3.3:70462720-70462739 | None:intergenic | 40.0% |
| !! | TCTTCCATGCCTCCATTTTT+AGG | + | chr3.3:70464439-70464458 | MS.gene75689:CDS | 40.0% |
| AACAATTGGGGGCTGAAATG+AGG | - | chr3.3:70464023-70464042 | None:intergenic | 45.0% | |
| AACCCCTCCATCGGTATTTA+GGG | + | chr3.3:70467205-70467224 | MS.gene75689:CDS | 45.0% | |
| AAGTATAGGGAAATGGGGTC+TGG | - | chr3.3:70462695-70462714 | None:intergenic | 45.0% | |
| AATACCAGGAGGAGACATTG+GGG | + | chr3.3:70463308-70463327 | MS.gene75689:intron | 45.0% | |
| AGAAGTTGACCGTGTCATGA+AGG | - | chr3.3:70467302-70467321 | None:intergenic | 45.0% | |
| AGGCGGAGAAAAATGACTGT+AGG | - | chr3.3:70465067-70465086 | None:intergenic | 45.0% | |
| ATATTGCACACTGGGCACAT+GGG | + | chr3.3:70464182-70464201 | MS.gene75689:CDS | 45.0% | |
| ATCACAGCGCAATTGTTCCA+TGG | + | chr3.3:70463459-70463478 | MS.gene75689:CDS | 45.0% | |
| ATCGGGGCATACATTACTTG+AGG | + | chr3.3:70462833-70462852 | MS.gene75689:CDS | 45.0% | |
| ATCGTTGTCAATATCAGCCG+GGG | + | chr3.3:70464956-70464975 | MS.gene75689:intron | 45.0% | |
| ATGAGATGTCACCACAGAAG+AGG | - | chr3.3:70465399-70465418 | None:intergenic | 45.0% | |
| CAAGCAAAAGATGAGGTTGC+CGG | - | chr3.3:70464605-70464624 | None:intergenic | 45.0% | |
| CAGGGAGATAAGTTAAACGG+CGG | - | chr3.3:70462603-70462622 | None:intergenic | 45.0% | |
| CATTGACCCCTAAATACCGA+TGG | - | chr3.3:70467215-70467234 | None:intergenic | 45.0% | |
| CCAATTGCTTCACCAATAGC+TGG | - | chr3.3:70465200-70465219 | None:intergenic | 45.0% | |
| CCAGCTATTGGTGAAGCAAT+TGG | + | chr3.3:70465197-70465216 | MS.gene75689:CDS | 45.0% | |
| CCATTTCCCTATACTTCACC+AGG | + | chr3.3:70462699-70462718 | MS.gene75689:CDS | 45.0% | |
| CCTGGTGAAGTATAGGGAAA+TGG | - | chr3.3:70462702-70462721 | None:intergenic | 45.0% | |
| CTGACAGAAGCCTTTCATAC+AGG | - | chr3.3:70466619-70466638 | None:intergenic | 45.0% | |
| CTTGAATCAACGTTGCATCG+AGG | + | chr3.3:70463754-70463773 | MS.gene75689:intron | 45.0% | |
| GAACCTGTCTTACAGATGTG+TGG | + | chr3.3:70464373-70464392 | MS.gene75689:intron | 45.0% | |
| GAAGTTGACCGTGTCATGAA+GGG | - | chr3.3:70467301-70467320 | None:intergenic | 45.0% | |
| GATCGTTGTCAATATCAGCC+GGG | + | chr3.3:70464955-70464974 | MS.gene75689:intron | 45.0% | |
| GCAAGCCATACATGAGTATG+AGG | + | chr3.3:70465259-70465278 | MS.gene75689:CDS | 45.0% | |
| GCCTGCTGGGTTAACTTTAT+AGG | + | chr3.3:70463691-70463710 | MS.gene75689:intron | 45.0% | |
| GGCCCATAGATGCGAATATT+TGG | - | chr3.3:70466644-70466663 | None:intergenic | 45.0% | |
| GTATGAATCAGCTAGACGGA+AGG | + | chr3.3:70462960-70462979 | MS.gene75689:CDS | 45.0% | |
| GTCAAAGATATCTGCCTGCT+GGG | + | chr3.3:70463678-70463697 | MS.gene75689:intron | 45.0% | |
| TAAATACCGATGGAGGGGTT+GGG | - | chr3.3:70467205-70467224 | None:intergenic | 45.0% | |
| TAACTGGGGCTTGGAAGTTT+CGG | - | chr3.3:70462532-70462551 | None:intergenic | 45.0% | |
| TATCCATGCCCTTCATGACA+CGG | + | chr3.3:70467290-70467309 | MS.gene75689:CDS | 45.0% | |
| TCAATATCAGCCGGGGAAAA+AGG | + | chr3.3:70464963-70464982 | MS.gene75689:intron | 45.0% | |
| TCAGCCCCCAATTGTTTCAA+TGG | + | chr3.3:70464027-70464046 | MS.gene75689:intron | 45.0% | |
| TGAACATCAACCACCATGTG+TGG | - | chr3.3:70464247-70464266 | None:intergenic | 45.0% | |
| TGACTAACATCAAGAGCCAG+AGG | - | chr3.3:70464874-70464893 | None:intergenic | 45.0% | |
| TGCTTGGTATGTTTCTCGTC+AGG | + | chr3.3:70463618-70463637 | MS.gene75689:intron | 45.0% | |
| TGGGTCCCACATAAAGTAGT+AGG | - | chr3.3:70466402-70466421 | None:intergenic | 45.0% | |
| TGTCAAAGATATCTGCCTGC+TGG | + | chr3.3:70463677-70463696 | MS.gene75689:intron | 45.0% | |
| TTAGGGTCACGTTGGGTATT+GGG | - | chr3.3:70463962-70463981 | None:intergenic | 45.0% | |
| ! | AAAATGGAGGCATGGAAGAC+AGG | - | chr3.3:70464438-70464457 | None:intergenic | 45.0% |
| ! | AGCTGATTCATACTCGTCTG+TGG | - | chr3.3:70462953-70462972 | None:intergenic | 45.0% |
| ! | GCTCGTTTGACTTCTTTCGA+AGG | - | chr3.3:70466671-70466690 | None:intergenic | 45.0% |
| ! | GGAAACTCTTCCTTTTTCCC+CGG | - | chr3.3:70464976-70464995 | None:intergenic | 45.0% |
| ! | TGCAACATTTCTGGACCAAC+AGG | + | chr3.3:70466736-70466755 | MS.gene75689:CDS | 45.0% |
| ! | TGTTACACTGGTCTGGAATC+TGG | - | chr3.3:70464346-70464365 | None:intergenic | 45.0% |
| ! | TTTAGGGTCACGTTGGGTAT+TGG | - | chr3.3:70463963-70463982 | None:intergenic | 45.0% |
| !! | ATATACATTGGCTTGGGTGG+AGG | + | chr3.3:70464745-70464764 | MS.gene75689:intron | 45.0% |
| AAGTTCACAAACCTGGACGG+AGG | - | chr3.3:70464687-70464706 | None:intergenic | 50.0% | |
| AATGCCTTCACAACAGCTGC+AGG | - | chr3.3:70462778-70462797 | None:intergenic | 50.0% | |
| ACCACATCACGTGTCAGACT+TGG | + | chr3.3:70462574-70462593 | MS.gene75689:CDS | 50.0% | |
| ACCCCTAAATACCGATGGAG+GGG | - | chr3.3:70467210-70467229 | None:intergenic | 50.0% | |
| ACCCCTCCATCGGTATTTAG+GGG | + | chr3.3:70467206-70467225 | MS.gene75689:CDS | 50.0% | |
| ACGGGTTTGATTCCCTGTGT+AGG | + | chr3.3:70464770-70464789 | MS.gene75689:intron | 50.0% | |
| ATACCAGGAGGAGACATTGG+GGG | + | chr3.3:70463309-70463328 | MS.gene75689:intron | 50.0% | |
| CAACCCCTCCATCGGTATTT+AGG | + | chr3.3:70467204-70467223 | MS.gene75689:CDS | 50.0% | |
| CATGCAGTTGAGTCACTTCC+AGG | + | chr3.3:70465660-70465679 | MS.gene75689:intron | 50.0% | |
| CATGGAGTGGCAATCAGATC+AGG | + | chr3.3:70467168-70467187 | MS.gene75689:CDS | 50.0% | |
| CGTTTCTCCTTCACTTCCTC+TGG | + | chr3.3:70464855-70464874 | MS.gene75689:intron | 50.0% | |
| CTAAATACCGATGGAGGGGT+TGG | - | chr3.3:70467206-70467225 | None:intergenic | 50.0% | |
| GAACAGCAATAACTGGGGCT+TGG | - | chr3.3:70462541-70462560 | None:intergenic | 50.0% | |
| GACCCCTAAATACCGATGGA+GGG | - | chr3.3:70467211-70467230 | None:intergenic | 50.0% | |
| GATATTGCACACTGGGCACA+TGG | + | chr3.3:70464181-70464200 | MS.gene75689:CDS | 50.0% | |
| GGGGGTTCTCTTTAATCACC+CGG | + | chr3.3:70463327-70463346 | MS.gene75689:intron | 50.0% | |
| TATTGCACACTGGGCACATG+GGG | + | chr3.3:70464183-70464202 | MS.gene75689:CDS | 50.0% | |
| TCAAGAGCCAGAGGAAGTGA+AGG | - | chr3.3:70464865-70464884 | None:intergenic | 50.0% | |
| TCTGACACGTGATGTGGTTC+TGG | - | chr3.3:70462572-70462591 | None:intergenic | 50.0% | |
| TCTTGGGACTGATACTCTGG+TGG | + | chr3.3:70465004-70465023 | MS.gene75689:intron | 50.0% | |
| TGACCCCTAAATACCGATGG+AGG | - | chr3.3:70467212-70467231 | None:intergenic | 50.0% | |
| TTACAGATGTGTGGGCCTAC+AGG | + | chr3.3:70464382-70464401 | MS.gene75689:intron | 50.0% | |
| TTGACTTCTTTCGAAGGGGC+TGG | - | chr3.3:70466665-70466684 | None:intergenic | 50.0% | |
| ! | CATTGAAGGGCACAGAGACT+AGG | - | chr3.3:70466186-70466205 | None:intergenic | 50.0% |
| ! | CTTTTGCTTGTTTCAGGCGG+TGG | + | chr3.3:70464615-70464634 | MS.gene75689:intron | 50.0% |
| ! | GGGACCCATTTTCAAAGTGC+TGG | + | chr3.3:70466414-70466433 | MS.gene75689:intron | 50.0% |
| ! | TGACGGTTGATGCACGAACA+GGG | - | chr3.3:70462621-70462640 | None:intergenic | 50.0% |
| ! | TTGACGGTTGATGCACGAAC+AGG | - | chr3.3:70462622-70462641 | None:intergenic | 50.0% |
| !! | TTTGGCTCTCGGATATGTCC+TGG | - | chr3.3:70465681-70465700 | None:intergenic | 50.0% |
| ATGTGTGGGCCTACAGGCAT+TGG | + | chr3.3:70464388-70464407 | MS.gene75689:CDS | 55.0% | |
| ATTGTGCCCAACCCCTCCAT+CGG | + | chr3.3:70467196-70467215 | MS.gene75689:CDS | 55.0% | |
| CACAAACCTGGACGGAGGTT+CGG | - | chr3.3:70464682-70464701 | None:intergenic | 55.0% | |
| CATGTGTGGAACACTCTGGC+AGG | - | chr3.3:70464233-70464252 | None:intergenic | 55.0% | |
| CCACCATGTGTGGAACACTC+TGG | - | chr3.3:70464237-70464256 | None:intergenic | 55.0% | |
| GAAGCCTGCAGCTGTTGTGA+AGG | + | chr3.3:70462771-70462790 | MS.gene75689:CDS | 55.0% | |
| GAGGCTGGAACACCAGCTAT+TGG | + | chr3.3:70465185-70465204 | MS.gene75689:CDS | 55.0% | |
| GCCAAGTCTGACACGTGATG+TGG | - | chr3.3:70462578-70462597 | None:intergenic | 55.0% | |
| GGCCCACACATCTGTAAGAC+AGG | - | chr3.3:70464379-70464398 | None:intergenic | 55.0% | |
| TGACCGTGTCATGAAGGGCA+TGG | - | chr3.3:70467296-70467315 | None:intergenic | 55.0% | |
| ! | ATGGAGGCATGGAAGACAGG+AGG | - | chr3.3:70464435-70464454 | None:intergenic | 55.0% |
| ! | CCAGAGTGTTCCACACATGG+TGG | + | chr3.3:70464234-70464253 | MS.gene75689:CDS | 55.0% |
| ! | CTGCCAGAGTGTTCCACACA+TGG | + | chr3.3:70464231-70464250 | MS.gene75689:CDS | 55.0% |
| ! | CTGGTAGTGTGGCCCAAAGA+GGG | - | chr3.3:70462676-70462695 | None:intergenic | 55.0% |
| ! | GGAAATGGGGTCTGGTAGTG+TGG | - | chr3.3:70462687-70462706 | None:intergenic | 55.0% |
| ! | TCTGGTAGTGTGGCCCAAAG+AGG | - | chr3.3:70462677-70462696 | None:intergenic | 55.0% |
| !! | ACCACAGGGTGTTTGGCTCT+CGG | - | chr3.3:70465692-70465711 | None:intergenic | 55.0% |
| !! | ATTGGCTTGGGTGGAGGTCA+CGG | + | chr3.3:70464751-70464770 | MS.gene75689:intron | 55.0% |
| CTTATGCCGAACCTCCGTCC+AGG | + | chr3.3:70464673-70464692 | MS.gene75689:CDS | 60.0% | |
| GAACCCCCAATGTCTCCTCC+TGG | - | chr3.3:70463315-70463334 | None:intergenic | 60.0% | |
| GATGGAGGGGTTGGGCACAA+TGG | - | chr3.3:70467197-70467216 | None:intergenic | 60.0% | |
| TCCGAGAGCCAAACACCCTG+TGG | + | chr3.3:70465688-70465707 | MS.gene75689:intron | 60.0% | |
| !! | TTGGCTTGGGTGGAGGTCAC+GGG | + | chr3.3:70464752-70464771 | MS.gene75689:intron | 60.0% |
| GCACACTGGGCACATGGGGT+TGG | + | chr3.3:70464187-70464206 | MS.gene75689:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70462514 | 70467338 | 70462514 | ID=MS.gene75689 |
| chr3.3 | mRNA | 70462514 | 70467338 | 70462514 | ID=MS.gene75689.t1;Parent=MS.gene75689 |
| chr3.3 | exon | 70462514 | 70462854 | 70462514 | ID=MS.gene75689.t1.exon1;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70462514 | 70462854 | 70462514 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70462942 | 70463101 | 70462942 | ID=MS.gene75689.t1.exon2;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70462942 | 70463101 | 70462942 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70463437 | 70463623 | 70463437 | ID=MS.gene75689.t1.exon3;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70463437 | 70463623 | 70463437 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70464161 | 70464306 | 70464161 | ID=MS.gene75689.t1.exon4;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70464161 | 70464306 | 70464161 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70464388 | 70464460 | 70464388 | ID=MS.gene75689.t1.exon5;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70464388 | 70464460 | 70464388 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70464631 | 70464694 | 70464631 | ID=MS.gene75689.t1.exon6;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70464631 | 70464694 | 70464631 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70465181 | 70465280 | 70465181 | ID=MS.gene75689.t1.exon7;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70465181 | 70465280 | 70465181 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70466599 | 70466757 | 70466599 | ID=MS.gene75689.t1.exon8;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70466599 | 70466757 | 70466599 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| chr3.3 | exon | 70467168 | 70467338 | 70467168 | ID=MS.gene75689.t1.exon9;Parent=MS.gene75689.t1 |
| chr3.3 | CDS | 70467168 | 70467338 | 70467168 | ID=cds.MS.gene75689.t1;Parent=MS.gene75689.t1 |
| Gene Sequence |
| Protein sequence |
