Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76035.t1 | KEH17299.1 | 97.1 | 68 | 2 | 0 | 1 | 68 | 58 | 125 | 1.10E-29 | 139 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76035.t1 | Q552P9 | 40.0 | 50 | 30 | 0 | 17 | 66 | 30 | 79 | 7.5e-06 | 51.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76035.t1 | A0A072TIC2 | 97.1 | 68 | 2 | 0 | 1 | 68 | 58 | 125 | 8.2e-30 | 139.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050227 | MS.gene76035 | 0.801544 | 8.56E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene76035 | 0.808621 | 2.83E-50 | -1.69E-46 |
| MS.gene050237 | MS.gene76035 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene76035 | 0.82235 | 2.48E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene76035 | 0.869622 | 2.70E-66 | -1.69E-46 |
| MS.gene050330 | MS.gene76035 | -0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene76035 | 0.824022 | 1.01E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene76035 | 0.824089 | 9.75E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene76035 | 0.820193 | 7.81E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene76035 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene76035 | 0.844734 | 6.29E-59 | -1.69E-46 |
| MS.gene051063 | MS.gene76035 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene76035 | 0.813864 | 2.06E-51 | -1.69E-46 |
| MS.gene051330 | MS.gene76035 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene76035 | 0.822092 | 2.85E-53 | -1.69E-46 |
| MS.gene051757 | MS.gene76035 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene051903 | MS.gene76035 | 0.806868 | 6.67E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene76035 | 0.829432 | 5.16E-55 | -1.69E-46 |
| MS.gene052286 | MS.gene76035 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene76035 | 0.861219 | 1.20E-63 | -1.69E-46 |
| MS.gene052309 | MS.gene76035 | -0.810833 | 9.47E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene76035 | 0.869826 | 2.31E-66 | -1.69E-46 |
| MS.gene052561 | MS.gene76035 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene76035 | 0.842589 | 2.36E-58 | -1.69E-46 |
| MS.gene052858 | MS.gene76035 | 0.857093 | 2.06E-62 | -1.69E-46 |
| MS.gene052860 | MS.gene76035 | 0.84706 | 1.47E-59 | -1.69E-46 |
| MS.gene052947 | MS.gene76035 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene76035 | 0.809287 | 2.04E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene76035 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene055608 | MS.gene76035 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene76035 | 0.814372 | 1.59E-51 | -1.69E-46 |
| MS.gene056091 | MS.gene76035 | 0.823356 | 1.45E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene76035 | 0.842372 | 2.69E-58 | -1.69E-46 |
| MS.gene056760 | MS.gene76035 | 0.809534 | 1.80E-50 | -1.69E-46 |
| MS.gene057079 | MS.gene76035 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene057140 | MS.gene76035 | 0.821669 | 3.57E-53 | -1.69E-46 |
| MS.gene057555 | MS.gene76035 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene76035 | 0.852104 | 5.75E-61 | -1.69E-46 |
| MS.gene057967 | MS.gene76035 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene058084 | MS.gene76035 | 0.82298 | 1.77E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene76035 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene058238 | MS.gene76035 | 0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene058635 | MS.gene76035 | 0.803297 | 3.73E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene76035 | 0.845169 | 4.80E-59 | -1.69E-46 |
| MS.gene059317 | MS.gene76035 | 0.817212 | 3.71E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene76035 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene059569 | MS.gene76035 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene059830 | MS.gene76035 | 0.800067 | 1.72E-48 | -1.69E-46 |
| MS.gene06001 | MS.gene76035 | 0.843692 | 1.20E-58 | -1.69E-46 |
| MS.gene060297 | MS.gene76035 | 0.82344 | 1.38E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene76035 | 0.832565 | 8.79E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene76035 | 0.806712 | 7.20E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene76035 | 0.831733 | 1.41E-55 | -1.69E-46 |
| MS.gene060619 | MS.gene76035 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene060907 | MS.gene76035 | 0.816596 | 5.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76035.t1 | MTR_0024s0060 | 95.652 | 69 | 3 | 0 | 1 | 69 | 58 | 126 | 1.34e-44 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76035.t1 | AT5G16060 | 75.362 | 69 | 17 | 0 | 1 | 69 | 1 | 69 | 3.44e-34 | 113 |
Find 22 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATGGAGCAGGTCGGGCT+AGG | 0.306635 | 6.3:+13973111 | MS.gene76035:CDS |
| GGAGAACACTTTCTGTTGTT+TGG | 0.342847 | 6.3:+13972453 | MS.gene76035:CDS |
| GGATGGAGCAGGTCGGGCTA+GGG | 0.356178 | 6.3:+13973112 | MS.gene76035:CDS |
| GATGGAGCAGGTCGGGCTAG+GGG | 0.389420 | 6.3:+13973113 | MS.gene76035:CDS |
| TGTAGGGGATGGAGCAGGTC+GGG | 0.401502 | 6.3:+13973106 | MS.gene76035:CDS |
| TAAAATTAGCAGGCTGTGTA+GGG | 0.412666 | 6.3:+13973090 | MS.gene76035:CDS |
| ATAAAATTAGCAGGCTGTGT+AGG | 0.488137 | 6.3:+13973089 | MS.gene76035:CDS |
| GTGTAGGGGATGGAGCAGGT+CGG | 0.516785 | 6.3:+13973105 | MS.gene76035:CDS |
| TTTCTGTTGTTTGGCAATGT+CGG | 0.528813 | 6.3:+13972462 | MS.gene76035:CDS |
| GGCTGTGTAGGGGATGGAGC+AGG | 0.533138 | 6.3:+13973101 | MS.gene76035:CDS |
| GAAATATGCTGAGTGTGCTA+TGG | 0.542058 | 6.3:+13972430 | MS.gene76035:CDS |
| AGCTTTACGGAGTAAAATGA+AGG | 0.543630 | 6.3:+13972373 | MS.gene76035:intron |
| AAATATGCTGAGTGTGCTAT+GGG | 0.546403 | 6.3:+13972431 | MS.gene76035:CDS |
| TCCTCAAAGTTTGAAATGGG+TGG | 0.549867 | 6.3:+13971544 | None:intergenic |
| GGTGCGACTATAAAATTAGC+AGG | 0.551846 | 6.3:+13973080 | MS.gene76035:CDS |
| TTAGCAGGCTGTGTAGGGGA+TGG | 0.586345 | 6.3:+13973095 | MS.gene76035:CDS |
| ACGGAGTAAAATGAAGGTGA+AGG | 0.589183 | 6.3:+13972379 | MS.gene76035:CDS |
| GTGAAGAAGAAAGTCGAAGA+AGG | 0.598683 | 6.3:+13971595 | MS.gene76035:CDS |
| GGGCTAGGGGTGTAAAGCAA+AGG | 0.610557 | 6.3:+13973126 | MS.gene76035:CDS |
| TTTGTTAGATATCAACATGG+AGG | 0.646725 | 6.3:+13973059 | MS.gene76035:intron |
| AAAATTAGCAGGCTGTGTAG+GGG | 0.679077 | 6.3:+13973091 | MS.gene76035:CDS |
| AATATGCTGAGTGTGCTATG+GGG | 0.810113 | 6.3:+13972432 | MS.gene76035:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTTTGTTTTATTTT+GGG | + | chr6.3:13972560-13972579 | MS.gene76035:intron | 10.0% |
| !!! | TTGATTTTTTTGTTTTATTT+TGG | + | chr6.3:13972559-13972578 | MS.gene76035:intron | 10.0% |
| !! | ATATACATTATTCCATAAAT+GGG | + | chr6.3:13971722-13971741 | MS.gene76035:intron | 15.0% |
| !! | CATATTATTCAAATGAATAA+GGG | - | chr6.3:13972084-13972103 | None:intergenic | 15.0% |
| !! | TATATACATTATTCCATAAA+TGG | + | chr6.3:13971721-13971740 | MS.gene76035:intron | 15.0% |
| !!! | ATTTTATAGTTAAATTGATG+TGG | + | chr6.3:13971765-13971784 | MS.gene76035:intron | 15.0% |
| !!! | CAATTTTTATGAACAAAAAT+GGG | + | chr6.3:13971675-13971694 | MS.gene76035:intron | 15.0% |
| !!! | TCAATTTTTATGAACAAAAA+TGG | + | chr6.3:13971674-13971693 | MS.gene76035:intron | 15.0% |
| !! | ACTTTATGATGAAGAAAAAA+TGG | - | chr6.3:13971653-13971672 | None:intergenic | 20.0% |
| !! | CTTTATGATGAAGAAAAAAT+GGG | - | chr6.3:13971652-13971671 | None:intergenic | 20.0% |
| !! | GCATATTATTCAAATGAATA+AGG | - | chr6.3:13972085-13972104 | None:intergenic | 20.0% |
| !!! | AAAAATGGGTTTATTTCAAA+TGG | + | chr6.3:13971689-13971708 | MS.gene76035:intron | 20.0% |
| !!! | AAAATGGGTTTATTTCAAAT+GGG | + | chr6.3:13971690-13971709 | MS.gene76035:intron | 20.0% |
| !!! | ATCATCATTTTCATTCAATT+GGG | + | chr6.3:13971794-13971813 | MS.gene76035:intron | 20.0% |
| !!! | ATGATCAAAACTTTGTTTAA+TGG | + | chr6.3:13972316-13972335 | MS.gene76035:intron | 20.0% |
| !!! | ATTTTTGTTAGATATCAACA+TGG | + | chr6.3:13973056-13973075 | MS.gene76035:intron | 20.0% |
| !!! | TATCATCATTTTCATTCAAT+TGG | + | chr6.3:13971793-13971812 | MS.gene76035:intron | 20.0% |
| !!! | TCTTTCGTTAGTAATTTTAT+GGG | - | chr6.3:13972702-13972721 | None:intergenic | 20.0% |
| !!! | TTTTATTTTGGGTTAAGAAT+TGG | + | chr6.3:13972571-13972590 | MS.gene76035:intron | 20.0% |
| ! | AAAAAGACATTTATCCAAAC+AGG | - | chr6.3:13971828-13971847 | None:intergenic | 25.0% |
| ! | AAAAGACATTTATCCAAACA+GGG | - | chr6.3:13971827-13971846 | None:intergenic | 25.0% |
| ! | GTTAGGGTTTAGTATTATTA+TGG | - | chr6.3:13971623-13971642 | None:intergenic | 25.0% |
| ! | TATAGTTAAATTGATGTGGT+GGG | + | chr6.3:13971769-13971788 | MS.gene76035:intron | 25.0% |
| ! | TTATACATAAGTGCTTATCA+TGG | - | chr6.3:13971876-13971895 | None:intergenic | 25.0% |
| ! | TTATAGTTAAATTGATGTGG+TGG | + | chr6.3:13971768-13971787 | MS.gene76035:intron | 25.0% |
| !! | ACTTTGTTTAATGGTGATAT+TGG | + | chr6.3:13972325-13972344 | MS.gene76035:intron | 25.0% |
| !! | CATAATTTGAAACCCATTTA+TGG | - | chr6.3:13971737-13971756 | None:intergenic | 25.0% |
| !! | GTCTTTCGTTAGTAATTTTA+TGG | - | chr6.3:13972703-13972722 | None:intergenic | 25.0% |
| !! | TTTTGTAATTTCGATGCATT+CGG | + | chr6.3:13972737-13972756 | MS.gene76035:intron | 25.0% |
| !!! | ATGAAGAAAAAATGGGTTTT+GGG | - | chr6.3:13971645-13971664 | None:intergenic | 25.0% |
| !!! | TTCATTTTTCGTTGTGTTTT+TGG | + | chr6.3:13972255-13972274 | MS.gene76035:intron | 25.0% |
| AATGGTGATATTGGAATGAT+GGG | + | chr6.3:13972334-13972353 | MS.gene76035:intron | 30.0% | |
| AGAGTATACAATTGATGGAA+GGG | + | chr6.3:13973019-13973038 | MS.gene76035:intron | 30.0% | |
| ATCTCACACATTTAGGAAAT+TGG | + | chr6.3:13972775-13972794 | MS.gene76035:intron | 30.0% | |
| CTCAAATGACTTCAAAATCT+GGG | + | chr6.3:13972828-13972847 | MS.gene76035:intron | 30.0% | |
| GATTACATTCAGCTATGTTA+CGG | + | chr6.3:13972162-13972181 | MS.gene76035:intron | 30.0% | |
| TAATGGTGATATTGGAATGA+TGG | + | chr6.3:13972333-13972352 | MS.gene76035:intron | 30.0% | |
| TAGAGTATACAATTGATGGA+AGG | + | chr6.3:13973018-13973037 | MS.gene76035:intron | 30.0% | |
| TCAAATGACTTCAAAATCTG+GGG | + | chr6.3:13972829-13972848 | MS.gene76035:intron | 30.0% | |
| TCCATCAATTGTATACTCTA+AGG | - | chr6.3:13973018-13973037 | None:intergenic | 30.0% | |
| TCTCACACATTTAGGAAATT+GGG | + | chr6.3:13972776-13972795 | MS.gene76035:intron | 30.0% | |
| TTTGTTAGATATCAACATGG+AGG | + | chr6.3:13973059-13973078 | MS.gene76035:intron | 30.0% | |
| ! | TGATCAATTTTGCAGCTTTA+CGG | + | chr6.3:13972360-13972379 | MS.gene76035:intron | 30.0% |
| !! | GATGAAGAAAAAATGGGTTT+TGG | - | chr6.3:13971646-13971665 | None:intergenic | 30.0% |
| !! | TGAATGTGTCTTTTGTTTGT+TGG | + | chr6.3:13972637-13972656 | MS.gene76035:intron | 30.0% |
| !!! | AAAAAATGGGTTTTGGGTTA+GGG | - | chr6.3:13971639-13971658 | None:intergenic | 30.0% |
| !!! | AGATGGGTTTTATTCTAATG+AGG | + | chr6.3:13972284-13972303 | MS.gene76035:intron | 30.0% |
| !!! | ATTTTGAAGTCATTTGAGGT+GGG | - | chr6.3:13972826-13972845 | None:intergenic | 30.0% |
| !!! | CACGAGTTTTTTTAGAAATG+TGG | + | chr6.3:13972898-13972917 | MS.gene76035:intron | 30.0% |
| AAATATGCTGAGTGTGCTAT+GGG | + | chr6.3:13972431-13972450 | MS.gene76035:CDS | 35.0% | |
| ACTAACGAAAGACACGTATA+GGG | + | chr6.3:13972710-13972729 | MS.gene76035:intron | 35.0% | |
| AGCTTTACGGAGTAAAATGA+AGG | + | chr6.3:13972373-13972392 | MS.gene76035:intron | 35.0% | |
| ATAAAATTAGCAGGCTGTGT+AGG | + | chr6.3:13973089-13973108 | MS.gene76035:CDS | 35.0% | |
| ATCTGAGCTTATCTACTGTT+TGG | - | chr6.3:13972044-13972063 | None:intergenic | 35.0% | |
| CAAATGACTTCAAAATCTGG+GGG | + | chr6.3:13972830-13972849 | MS.gene76035:intron | 35.0% | |
| CACTGTAAAATCTGAAGAGA+TGG | - | chr6.3:13972952-13972971 | None:intergenic | 35.0% | |
| CCTCAAATGACTTCAAAATC+TGG | + | chr6.3:13972827-13972846 | MS.gene76035:intron | 35.0% | |
| CTCACACATTTAGGAAATTG+GGG | + | chr6.3:13972777-13972796 | MS.gene76035:intron | 35.0% | |
| GAAATTGGGGTTTAGTCAAA+GGG | + | chr6.3:13972790-13972809 | MS.gene76035:intron | 35.0% | |
| GAGTATACAATTGATGGAAG+GGG | + | chr6.3:13973020-13973039 | MS.gene76035:intron | 35.0% | |
| GCCTTAGAGTATACAATTGA+TGG | + | chr6.3:13973014-13973033 | MS.gene76035:intron | 35.0% | |
| TAAAATTAGCAGGCTGTGTA+GGG | + | chr6.3:13973090-13973109 | MS.gene76035:CDS | 35.0% | |
| TAAATGCATCTTCCCTTTGT+CGG | + | chr6.3:13972605-13972624 | MS.gene76035:intron | 35.0% | |
| TACTAACGAAAGACACGTAT+AGG | + | chr6.3:13972709-13972728 | MS.gene76035:intron | 35.0% | |
| TCAATAACCAAACCGACAAA+GGG | - | chr6.3:13972620-13972639 | None:intergenic | 35.0% | |
| TTAAGTTCATGCCTAAAGCT+AGG | + | chr6.3:13972987-13973006 | MS.gene76035:intron | 35.0% | |
| TTCAATAACCAAACCGACAA+AGG | - | chr6.3:13972621-13972640 | None:intergenic | 35.0% | |
| ! | TGAAGAGATGGATTTGACTT+GGG | - | chr6.3:13972940-13972959 | None:intergenic | 35.0% |
| ! | TTTCTGTTGTTTGGCAATGT+CGG | + | chr6.3:13972462-13972481 | MS.gene76035:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr6.3:13971945-13971964 | MS.gene76035:intron | 35.0% |
| !! | GTGTCTTTTGTTTGTTGGTT+TGG | + | chr6.3:13972642-13972661 | MS.gene76035:intron | 35.0% |
| !!! | CCAGATTTTGAAGTCATTTG+AGG | - | chr6.3:13972830-13972849 | None:intergenic | 35.0% |
| !!! | GAAAAAATGGGTTTTGGGTT+AGG | - | chr6.3:13971640-13971659 | None:intergenic | 35.0% |
| !!! | GATTTTGAAGTCATTTGAGG+TGG | - | chr6.3:13972827-13972846 | None:intergenic | 35.0% |
| !!! | GTGTTTTTGGAAGAAGAGAT+GGG | + | chr6.3:13972268-13972287 | MS.gene76035:intron | 35.0% |
| !!! | TGTGTTTTTGGAAGAAGAGA+TGG | + | chr6.3:13972267-13972286 | MS.gene76035:intron | 35.0% |
| !!! | TTTTGAAGTCATTTGAGGTG+GGG | - | chr6.3:13972825-13972844 | None:intergenic | 35.0% |
| AAAATTAGCAGGCTGTGTAG+GGG | + | chr6.3:13973091-13973110 | MS.gene76035:CDS | 40.0% | |
| AATATGCTGAGTGTGCTATG+GGG | + | chr6.3:13972432-13972451 | MS.gene76035:CDS | 40.0% | |
| ACGGAGTAAAATGAAGGTGA+AGG | + | chr6.3:13972379-13972398 | MS.gene76035:CDS | 40.0% | |
| ACTAACCGGATACACATTCA+AGG | - | chr6.3:13972669-13972688 | None:intergenic | 40.0% | |
| GAAATATGCTGAGTGTGCTA+TGG | + | chr6.3:13972430-13972449 | MS.gene76035:CDS | 40.0% | |
| GGAAATTGGGGTTTAGTCAA+AGG | + | chr6.3:13972789-13972808 | MS.gene76035:intron | 40.0% | |
| GGAGAACACTTTCTGTTGTT+TGG | + | chr6.3:13972453-13972472 | MS.gene76035:CDS | 40.0% | |
| GGTGCGACTATAAAATTAGC+AGG | + | chr6.3:13973080-13973099 | MS.gene76035:CDS | 40.0% | |
| GTGAAGAAGAAAGTCGAAGA+AGG | + | chr6.3:13971595-13971614 | MS.gene76035:CDS | 40.0% | |
| GTGACACATCTCACACATTT+AGG | + | chr6.3:13972768-13972787 | MS.gene76035:intron | 40.0% | |
| TTGGTCCTTGAATGTGTATC+CGG | + | chr6.3:13972661-13972680 | MS.gene76035:intron | 40.0% | |
| ! | ACGCCTTCTATCAAAAGTGT+CGG | - | chr6.3:13972117-13972136 | None:intergenic | 40.0% |
| ! | ATGTGTATCCGGTTAGTCAA+AGG | + | chr6.3:13972672-13972691 | MS.gene76035:intron | 40.0% |
| ! | CTCTTCAGATTTTACAGTGC+CGG | + | chr6.3:13972953-13972972 | MS.gene76035:intron | 40.0% |
| ! | CTGAAGAGATGGATTTGACT+TGG | - | chr6.3:13972941-13972960 | None:intergenic | 40.0% |
| ! | GTGTTTCCAGAAGTGTACTT+TGG | - | chr6.3:13972881-13972900 | None:intergenic | 40.0% |
| ! | TGTGTATCCGGTTAGTCAAA+GGG | + | chr6.3:13972673-13972692 | MS.gene76035:intron | 40.0% |
| !! | ATTGGGTTTTAGTCCCTGTT+TGG | + | chr6.3:13971811-13971830 | MS.gene76035:intron | 40.0% |
| !! | TATCAAAAGTGTCGGTGCTA+AGG | - | chr6.3:13972109-13972128 | None:intergenic | 40.0% |
| AACGAAAGACACGTATAGGG+AGG | + | chr6.3:13972713-13972732 | MS.gene76035:intron | 45.0% | |
| GAACTTAACGTGTAGTGTGC+CGG | - | chr6.3:13972975-13972994 | None:intergenic | 45.0% | |
| GCAGTTCCAAAGTACACTTC+TGG | + | chr6.3:13972872-13972891 | MS.gene76035:intron | 45.0% | |
| TTCATGCCTAAAGCTAGGTG+AGG | + | chr6.3:13972992-13973011 | MS.gene76035:intron | 45.0% | |
| !! | AGAGATGGATTTGACTTGGG+AGG | - | chr6.3:13972937-13972956 | None:intergenic | 45.0% |
| !! | GCACCGACACTTTTGATAGA+AGG | + | chr6.3:13972111-13972130 | MS.gene76035:intron | 45.0% |
| !!! | ACTTGGGAGGCTACTTTTCA+CGG | - | chr6.3:13972924-13972943 | None:intergenic | 45.0% |
| TGCTGTGTCAATGTCGTGTC+TGG | + | chr6.3:13972188-13972207 | MS.gene76035:intron | 50.0% | |
| TGGGTCTCCCTTTGACTAAC+CGG | - | chr6.3:13972683-13972702 | None:intergenic | 50.0% | |
| ! | CTAAGGCCTCACCTAGCTTT+AGG | - | chr6.3:13973001-13973020 | None:intergenic | 50.0% |
| ! | GCATCTTCCCTTTGTCGGTT+TGG | + | chr6.3:13972610-13972629 | MS.gene76035:intron | 50.0% |
| GTCGTGTCTGGTGTCTGTGT+CGG | + | chr6.3:13972200-13972219 | MS.gene76035:intron | 55.0% | |
| TTAGCAGGCTGTGTAGGGGA+TGG | + | chr6.3:13973095-13973114 | MS.gene76035:CDS | 55.0% | |
| ! | GGGCTAGGGGTGTAAAGCAA+AGG | + | chr6.3:13973126-13973145 | MS.gene76035:CDS | 55.0% |
| GTGTAGGGGATGGAGCAGGT+CGG | + | chr6.3:13973105-13973124 | MS.gene76035:CDS | 60.0% | |
| TGTAGGGGATGGAGCAGGTC+GGG | + | chr6.3:13973106-13973125 | MS.gene76035:CDS | 60.0% | |
| GGATGGAGCAGGTCGGGCTA+GGG | + | chr6.3:13973112-13973131 | MS.gene76035:CDS | 65.0% | |
| GGCTGTGTAGGGGATGGAGC+AGG | + | chr6.3:13973101-13973120 | MS.gene76035:CDS | 65.0% | |
| ! | GATGGAGCAGGTCGGGCTAG+GGG | + | chr6.3:13973113-13973132 | MS.gene76035:CDS | 65.0% |
| GGGATGGAGCAGGTCGGGCT+AGG | + | chr6.3:13973111-13973130 | MS.gene76035:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 13971559 | 13973157 | 13971559 | ID=MS.gene76035 |
| chr6.3 | mRNA | 13971559 | 13973157 | 13971559 | ID=MS.gene76035.t1;Parent=MS.gene76035 |
| chr6.3 | exon | 13971559 | 13971616 | 13971559 | ID=MS.gene76035.t1.exon1;Parent=MS.gene76035.t1 |
| chr6.3 | CDS | 13971559 | 13971616 | 13971559 | ID=cds.MS.gene76035.t1;Parent=MS.gene76035.t1 |
| chr6.3 | exon | 13972375 | 13972522 | 13972375 | ID=MS.gene76035.t1.exon2;Parent=MS.gene76035.t1 |
| chr6.3 | CDS | 13972375 | 13972522 | 13972375 | ID=cds.MS.gene76035.t1;Parent=MS.gene76035.t1 |
| chr6.3 | exon | 13973067 | 13973157 | 13973067 | ID=MS.gene76035.t1.exon3;Parent=MS.gene76035.t1 |
| chr6.3 | CDS | 13973067 | 13973157 | 13973067 | ID=cds.MS.gene76035.t1;Parent=MS.gene76035.t1 |
| Gene Sequence |
| Protein sequence |
