Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76620.t1 | XP_003613849.1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 4.00E-140 | 507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76620.t1 | Q9LDR9 | 84.3 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 5.9e-124 | 444.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76620.t1 | G7KGP1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 2.9e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene76620 | 0.814921 | 1.20E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene76620 | 0.846796 | 1.73E-59 | -1.69E-46 |
| MS.gene049491 | MS.gene76620 | 0.803561 | 3.29E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene76620 | 0.86523 | 6.87E-65 | -1.69E-46 |
| MS.gene050076 | MS.gene76620 | 0.81332 | 2.72E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene76620 | 0.802618 | 5.15E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene76620 | 0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene76620 | 0.829104 | 6.20E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene76620 | 0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene76620 | -0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene76620 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene76620 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene05119 | MS.gene76620 | -0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene76620 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene051535 | MS.gene76620 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene76620 | 0.898694 | 4.13E-77 | -1.69E-46 |
| MS.gene051663 | MS.gene76620 | 0.87234 | 3.43E-67 | -1.69E-46 |
| MS.gene051983 | MS.gene76620 | 0.804189 | 2.43E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene76620 | 0.801904 | 7.22E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene76620 | 0.831889 | 1.29E-55 | -1.69E-46 |
| MS.gene052302 | MS.gene76620 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene76620 | -0.816726 | 4.77E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene76620 | 0.811647 | 6.31E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene76620 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene76620 | 0.813603 | 2.35E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene76620 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene053559 | MS.gene76620 | 0.832014 | 1.20E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene76620 | 0.879233 | 1.47E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene76620 | 0.829495 | 4.98E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene76620 | 0.807441 | 5.05E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene76620 | 0.808676 | 2.76E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene76620 | 0.815759 | 7.84E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene76620 | 0.856707 | 2.68E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene76620 | 0.824313 | 8.64E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene76620 | 0.815748 | 7.88E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene76620 | 0.8582 | 9.70E-63 | -1.69E-46 |
| MS.gene055428 | MS.gene76620 | 0.852065 | 5.89E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene76620 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene76620 | 0.832682 | 8.22E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene76620 | 0.809747 | 1.62E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene76620 | 0.802993 | 4.31E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene76620 | 0.811255 | 7.67E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene76620 | 0.811583 | 6.51E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene76620 | 0.802983 | 4.33E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene76620 | 0.855678 | 5.37E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene76620 | 0.81563 | 8.38E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene76620 | 0.816779 | 4.64E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene76620 | 0.835554 | 1.57E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene76620 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene76620 | 0.805988 | 1.02E-49 | -1.69E-46 |
| MS.gene058201 | MS.gene76620 | 0.819002 | 1.46E-52 | -1.69E-46 |
| MS.gene058236 | MS.gene76620 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene058661 | MS.gene76620 | -0.816333 | 5.84E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene76620 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene76620 | 0.815449 | 9.19E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene76620 | 0.824599 | 7.40E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene76620 | 0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene76620 | 0.819862 | 9.29E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene76620 | 0.8484 | 6.28E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene76620 | 0.817973 | 2.50E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene76620 | 0.874615 | 5.88E-68 | -1.69E-46 |
| MS.gene059899 | MS.gene76620 | 0.852078 | 5.84E-61 | -1.69E-46 |
| MS.gene060084 | MS.gene76620 | 0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene76620 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene76620 | 0.851592 | 8.03E-61 | -1.69E-46 |
| MS.gene061049 | MS.gene76620 | 0.8381 | 3.51E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene76620 | 0.851519 | 8.42E-61 | -1.69E-46 |
| MS.gene061113 | MS.gene76620 | 0.840734 | 7.28E-58 | -1.69E-46 |
| MS.gene061265 | MS.gene76620 | 0.855196 | 7.42E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76620 | MS.gene24107 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76620.t1 | MTR_5g041700 | 97.581 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 0.0 | 496 |
| MS.gene76620.t1 | MTR_4g081950 | 87.045 | 247 | 32 | 0 | 1 | 247 | 37 | 283 | 3.56e-164 | 455 |
| MS.gene76620.t1 | MTR_3g094040 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.06e-146 | 410 |
| MS.gene76620.t1 | MTR_3g094060 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.47e-146 | 409 |
| MS.gene76620.t1 | MTR_3g435430 | 80.769 | 234 | 45 | 0 | 14 | 247 | 14 | 247 | 1.15e-145 | 407 |
| MS.gene76620.t1 | MTR_5g075320 | 73.984 | 246 | 63 | 1 | 3 | 247 | 6 | 251 | 4.17e-139 | 390 |
| MS.gene76620.t1 | MTR_7g011060 | 76.305 | 249 | 48 | 3 | 1 | 247 | 1 | 240 | 2.34e-136 | 383 |
| MS.gene76620.t1 | MTR_3g466760 | 75.709 | 247 | 60 | 0 | 1 | 247 | 14 | 260 | 2.55e-133 | 376 |
| MS.gene76620.t1 | MTR_3g466790 | 75.304 | 247 | 61 | 0 | 1 | 247 | 8 | 254 | 8.28e-133 | 375 |
| MS.gene76620.t1 | MTR_5g079950 | 74.236 | 229 | 57 | 1 | 22 | 248 | 30 | 258 | 2.91e-126 | 358 |
| MS.gene76620.t1 | MTR_2g097030 | 66.795 | 259 | 75 | 2 | 1 | 248 | 1 | 259 | 8.43e-126 | 357 |
| MS.gene76620.t1 | MTR_7g061720 | 74.672 | 229 | 56 | 1 | 22 | 248 | 29 | 257 | 1.42e-125 | 357 |
| MS.gene76620.t1 | MTR_6g012520 | 75.200 | 250 | 51 | 3 | 1 | 247 | 1 | 242 | 5.26e-123 | 350 |
| MS.gene76620.t1 | MTR_4g063975 | 72.489 | 229 | 61 | 1 | 22 | 248 | 29 | 257 | 1.36e-117 | 337 |
| MS.gene76620.t1 | MTR_1g026020 | 65.919 | 223 | 73 | 2 | 24 | 243 | 28 | 250 | 1.61e-111 | 321 |
| MS.gene76620.t1 | MTR_1g085460 | 65.315 | 222 | 73 | 3 | 25 | 242 | 30 | 251 | 3.03e-105 | 305 |
| MS.gene76620.t1 | MTR_7g111010 | 59.761 | 251 | 95 | 5 | 3 | 247 | 4 | 254 | 1.16e-104 | 303 |
| MS.gene76620.t1 | MTR_7g110990 | 64.474 | 228 | 76 | 4 | 25 | 247 | 12 | 239 | 7.30e-104 | 301 |
| MS.gene76620.t1 | MTR_7g013150 | 57.322 | 239 | 98 | 2 | 6 | 242 | 11 | 247 | 3.44e-97 | 285 |
| MS.gene76620.t1 | MTR_4g124340 | 58.667 | 225 | 88 | 3 | 23 | 244 | 59 | 281 | 7.18e-97 | 285 |
| MS.gene76620.t1 | MTR_7g013120 | 54.839 | 248 | 107 | 3 | 2 | 246 | 6 | 251 | 4.69e-95 | 279 |
| MS.gene76620.t1 | MTR_7g013140 | 57.500 | 240 | 96 | 3 | 7 | 244 | 12 | 247 | 1.37e-94 | 278 |
| MS.gene76620.t1 | MTR_8g058990 | 55.870 | 247 | 104 | 3 | 2 | 245 | 6 | 250 | 1.53e-92 | 273 |
| MS.gene76620.t1 | MTR_8g464350 | 54.098 | 244 | 108 | 2 | 1 | 242 | 7 | 248 | 1.14e-91 | 271 |
| MS.gene76620.t1 | MTR_5g076950 | 56.696 | 224 | 96 | 1 | 25 | 247 | 41 | 264 | 3.31e-90 | 267 |
| MS.gene76620.t1 | MTR_5g011210 | 57.658 | 222 | 90 | 3 | 25 | 243 | 37 | 257 | 6.80e-89 | 264 |
| MS.gene76620.t1 | MTR_0040s0140 | 48.996 | 249 | 125 | 1 | 1 | 247 | 8 | 256 | 7.74e-87 | 258 |
| MS.gene76620.t1 | MTR_4g102450 | 55.605 | 223 | 93 | 4 | 25 | 243 | 36 | 256 | 4.05e-84 | 252 |
| MS.gene76620.t1 | MTR_2g090255 | 48.163 | 245 | 124 | 2 | 6 | 247 | 8 | 252 | 4.84e-84 | 251 |
| MS.gene76620.t1 | MTR_3g064510 | 52.790 | 233 | 101 | 5 | 25 | 248 | 53 | 285 | 6.11e-81 | 244 |
| MS.gene76620.t1 | MTR_6g012500 | 70.000 | 120 | 30 | 1 | 134 | 247 | 161 | 280 | 3.43e-53 | 173 |
| MS.gene76620.t1 | MTR_0008s0120 | 38.618 | 246 | 92 | 4 | 3 | 245 | 7 | 196 | 3.37e-46 | 153 |
| MS.gene76620.t1 | MTR_2g090270 | 31.197 | 234 | 131 | 9 | 25 | 243 | 35 | 253 | 1.77e-25 | 101 |
| MS.gene76620.t1 | MTR_2g090265 | 29.845 | 258 | 151 | 10 | 1 | 243 | 9 | 251 | 5.19e-25 | 99.8 |
| MS.gene76620.t1 | MTR_0118s0070 | 32.314 | 229 | 127 | 10 | 30 | 242 | 53 | 269 | 1.32e-24 | 99.0 |
| MS.gene76620.t1 | MTR_0122s0020 | 31.169 | 231 | 135 | 9 | 25 | 243 | 41 | 259 | 1.38e-23 | 96.3 |
| MS.gene76620.t1 | MTR_0809s0010 | 30.769 | 234 | 130 | 11 | 25 | 242 | 47 | 264 | 8.20e-22 | 91.7 |
| MS.gene76620.t1 | MTR_4g028640 | 31.197 | 234 | 128 | 11 | 25 | 242 | 42 | 258 | 2.40e-21 | 90.1 |
| MS.gene76620.t1 | MTR_5g013440 | 27.801 | 241 | 156 | 9 | 9 | 242 | 16 | 245 | 7.72e-18 | 80.5 |
| MS.gene76620.t1 | MTR_4g099370 | 28.761 | 226 | 144 | 9 | 25 | 242 | 28 | 244 | 6.01e-17 | 78.2 |
| MS.gene76620.t1 | MTR_0122s0020 | 32.386 | 176 | 96 | 8 | 25 | 189 | 41 | 204 | 1.71e-15 | 73.2 |
| MS.gene76620.t1 | MTR_4g075790 | 28.829 | 222 | 127 | 9 | 36 | 242 | 32 | 237 | 2.62e-15 | 73.6 |
| MS.gene76620.t1 | MTR_1g085365 | 55.357 | 56 | 25 | 0 | 192 | 247 | 4 | 59 | 3.13e-15 | 68.6 |
| MS.gene76620.t1 | MTR_4g098930 | 27.660 | 235 | 136 | 10 | 25 | 242 | 29 | 246 | 2.97e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76620.t1 | AT2G03090 | 83.065 | 248 | 42 | 0 | 1 | 248 | 6 | 253 | 3.30e-155 | 431 |
| MS.gene76620.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene76620.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene76620.t1 | AT1G69530 | 81.600 | 250 | 44 | 2 | 1 | 248 | 1 | 250 | 3.08e-150 | 420 |
| MS.gene76620.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 6.35e-146 | 408 |
| MS.gene76620.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 11 | 259 | 7.53e-146 | 408 |
| MS.gene76620.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene76620.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene76620.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 1.88e-138 | 391 |
| MS.gene76620.t1 | AT2G40610 | 70.850 | 247 | 68 | 2 | 2 | 247 | 10 | 253 | 5.23e-133 | 375 |
| MS.gene76620.t1 | AT2G39700 | 75.983 | 229 | 53 | 1 | 22 | 248 | 28 | 256 | 2.59e-129 | 366 |
| MS.gene76620.t1 | AT1G69530 | 73.600 | 250 | 34 | 3 | 1 | 248 | 1 | 220 | 4.94e-128 | 362 |
| MS.gene76620.t1 | AT1G69530 | 77.729 | 229 | 47 | 3 | 1 | 227 | 1 | 227 | 3.57e-127 | 360 |
| MS.gene76620.t1 | AT5G02260 | 74.236 | 229 | 57 | 1 | 22 | 248 | 29 | 257 | 8.44e-127 | 360 |
| MS.gene76620.t1 | AT3G55500 | 67.717 | 254 | 76 | 2 | 1 | 248 | 6 | 259 | 5.95e-126 | 358 |
| MS.gene76620.t1 | AT5G05290 | 72.124 | 226 | 62 | 1 | 23 | 247 | 30 | 255 | 2.73e-125 | 356 |
| MS.gene76620.t1 | AT2G37640 | 73.362 | 229 | 59 | 1 | 22 | 248 | 33 | 261 | 3.15e-124 | 353 |
| MS.gene76620.t1 | AT3G29030 | 74.222 | 225 | 49 | 2 | 25 | 248 | 38 | 254 | 2.07e-121 | 346 |
| MS.gene76620.t1 | AT2G28950 | 67.578 | 256 | 75 | 2 | 1 | 248 | 1 | 256 | 5.63e-121 | 345 |
| MS.gene76620.t1 | AT1G20190 | 67.713 | 223 | 69 | 2 | 24 | 243 | 25 | 247 | 5.58e-111 | 320 |
| MS.gene76620.t1 | AT2G37640 | 71.292 | 209 | 58 | 1 | 42 | 248 | 28 | 236 | 3.00e-110 | 317 |
| MS.gene76620.t1 | AT4G01630 | 62.810 | 242 | 85 | 4 | 6 | 242 | 8 | 249 | 7.95e-107 | 309 |
| MS.gene76620.t1 | AT5G39280 | 55.702 | 228 | 99 | 1 | 17 | 244 | 46 | 271 | 2.05e-94 | 278 |
| MS.gene76620.t1 | AT5G39300 | 55.459 | 229 | 100 | 1 | 16 | 244 | 46 | 272 | 4.13e-94 | 278 |
| MS.gene76620.t1 | AT5G39270 | 57.273 | 220 | 92 | 1 | 25 | 244 | 58 | 275 | 2.19e-92 | 273 |
| MS.gene76620.t1 | AT5G39290 | 56.364 | 220 | 94 | 1 | 25 | 244 | 58 | 275 | 1.10e-91 | 271 |
| MS.gene76620.t1 | AT1G20190 | 64.706 | 187 | 63 | 2 | 60 | 243 | 2 | 188 | 9.57e-89 | 261 |
| MS.gene76620.t1 | AT1G12560 | 53.785 | 251 | 110 | 5 | 3 | 248 | 13 | 262 | 3.86e-88 | 262 |
| MS.gene76620.t1 | AT1G62980 | 53.061 | 245 | 108 | 4 | 1 | 242 | 10 | 250 | 3.01e-87 | 259 |
| MS.gene76620.t1 | AT5G39310 | 55.405 | 222 | 96 | 2 | 24 | 244 | 89 | 308 | 3.12e-87 | 261 |
| MS.gene76620.t1 | AT3G03220 | 53.778 | 225 | 103 | 1 | 25 | 248 | 40 | 264 | 8.19e-86 | 256 |
| MS.gene76620.t1 | AT3G15370 | 52.400 | 250 | 104 | 7 | 8 | 247 | 7 | 251 | 3.27e-84 | 251 |
| MS.gene76620.t1 | AT5G39260 | 52.212 | 226 | 100 | 2 | 20 | 244 | 40 | 258 | 9.80e-79 | 238 |
| MS.gene76620.t1 | AT4G38210 | 47.967 | 246 | 121 | 3 | 6 | 247 | 12 | 254 | 2.35e-78 | 237 |
| MS.gene76620.t1 | AT3G15370 | 46.786 | 280 | 104 | 8 | 8 | 247 | 7 | 281 | 1.51e-77 | 236 |
| MS.gene76620.t1 | AT4G28250 | 34.764 | 233 | 125 | 10 | 25 | 243 | 36 | 255 | 2.23e-28 | 108 |
| MS.gene76620.t1 | AT2G20750 | 32.189 | 233 | 134 | 9 | 25 | 243 | 40 | 262 | 1.88e-25 | 101 |
| MS.gene76620.t1 | AT4G28250 | 33.621 | 232 | 123 | 10 | 25 | 243 | 36 | 249 | 1.40e-24 | 98.6 |
| MS.gene76620.t1 | AT1G65680 | 30.864 | 243 | 141 | 10 | 15 | 242 | 37 | 267 | 2.99e-23 | 95.5 |
| MS.gene76620.t1 | AT1G65681 | 30.876 | 217 | 125 | 9 | 39 | 242 | 12 | 216 | 2.35e-19 | 84.0 |
| MS.gene76620.t1 | AT2G20750 | 31.792 | 173 | 98 | 6 | 25 | 186 | 40 | 203 | 9.66e-18 | 79.7 |
| MS.gene76620.t1 | AT4G17030 | 29.084 | 251 | 149 | 9 | 6 | 242 | 8 | 243 | 1.03e-17 | 80.1 |
| MS.gene76620.t1 | AT2G45110 | 28.814 | 236 | 129 | 9 | 28 | 242 | 36 | 253 | 2.08e-17 | 79.3 |
| MS.gene76620.t1 | AT4G28250 | 33.143 | 175 | 90 | 7 | 25 | 189 | 36 | 193 | 1.07e-16 | 76.6 |
| MS.gene76620.t1 | AT4G28250 | 33.721 | 172 | 87 | 7 | 25 | 186 | 36 | 190 | 2.60e-16 | 75.5 |
| MS.gene76620.t1 | AT3G60570 | 25.984 | 254 | 156 | 9 | 8 | 242 | 11 | 251 | 1.73e-15 | 74.3 |
| MS.gene76620.t1 | AT3G45970 | 26.415 | 212 | 134 | 9 | 43 | 242 | 14 | 215 | 1.70e-14 | 71.2 |
| MS.gene76620.t1 | AT3G45960 | 29.126 | 206 | 125 | 9 | 48 | 242 | 46 | 241 | 1.83e-13 | 68.6 |
| MS.gene76620.t1 | AT4G38400 | 26.699 | 206 | 130 | 8 | 48 | 242 | 47 | 242 | 5.02e-12 | 64.7 |
| MS.gene76620.t1 | AT3G45970 | 25.604 | 207 | 132 | 9 | 48 | 242 | 46 | 242 | 7.12e-12 | 63.9 |
Find 73 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCCAGCTGGTTGGTCTTT+TGG | 0.178373 | 5.1:-31422286 | MS.gene76620:CDS |
| CAAAGCAACAATTATCTTAA+TGG | 0.193864 | 5.1:-31422370 | MS.gene76620:CDS |
| GGATGCCAATGTCTAGAAAT+TGG | 0.241916 | 5.1:-31422405 | MS.gene76620:CDS |
| AATGCACATGCAACTTTCTA+TGG | 0.254508 | 5.1:-31423642 | MS.gene76620:CDS |
| TCTCATTGGGTTGTTCTTCA+TGG | 0.255156 | 5.1:-31423715 | MS.gene76620:CDS |
| GTGTCTTCCTGGCTCTATTT+TGG | 0.260571 | 5.1:-31423350 | MS.gene76620:CDS |
| CTAGAAATTGGGGTCAAAAT+TGG | 0.289763 | 5.1:-31422393 | MS.gene76620:CDS |
| TTAGGTGGTGCATGTGGATA+TGG | 0.293336 | 5.1:-31423490 | MS.gene76620:intron |
| GTACATTCAGTAGCTATTAA+AGG | 0.297161 | 5.1:-31422442 | MS.gene76620:CDS |
| GCAGAAGAAGGGGAGGAATT+AGG | 0.323849 | 5.1:-31422531 | MS.gene76620:CDS |
| GTGGTTCTTGCTTTGAGATT+AGG | 0.333003 | 5.1:-31423393 | MS.gene76620:CDS |
| GACCGTAAATGGTGTCTTCC+TGG | 0.357239 | 5.1:-31423361 | MS.gene76620:CDS |
| CACCATCCTCCATTGTTATT+AGG | 0.369879 | 5.1:+31423289 | None:intergenic |
| GCTATTAAAGGGTCAAGAAC+AGG | 0.379089 | 5.1:-31422430 | MS.gene76620:CDS |
| TTCCATAACCTTGACTGTAT+AGG | 0.380723 | 5.1:+31423464 | None:intergenic |
| TGGCCAAGCTTTGTCTTTCA+AGG | 0.384678 | 5.1:-31422350 | MS.gene76620:CDS |
| GATGCCAATGTCTAGAAATT+GGG | 0.384818 | 5.1:-31422404 | MS.gene76620:CDS |
| AGCCAGGAAGACACCATTTA+CGG | 0.387805 | 5.1:+31423359 | None:intergenic |
| TGCTTTGAGATTAGGTGTGC+TGG | 0.396638 | 5.1:-31423385 | MS.gene76620:CDS |
| AATTCCTCCCCTTCTTCTGC+AGG | 0.397486 | 5.1:+31422534 | None:intergenic |
| ACCAGCTGGGGCAGCATTGT+TGG | 0.398932 | 5.1:+31422297 | None:intergenic |
| TTATTAGGCAAGGCATTGTT+TGG | 0.406087 | 5.1:+31423304 | None:intergenic |
| ATTTACCTTCTGTAAGAAAC+AGG | 0.410554 | 5.1:+31423190 | None:intergenic |
| TATGGTGTGTCTAACGGAAT+TGG | 0.414245 | 5.1:+31422245 | None:intergenic |
| GGTGTGCTGGTGACCGTAAA+TGG | 0.417502 | 5.1:-31423372 | MS.gene76620:CDS |
| AACCTATACAGTCAAGGTTA+TGG | 0.427075 | 5.1:-31423466 | MS.gene76620:CDS |
| CTTATGGTTATGGTGGAGGA+TGG | 0.431228 | 5.1:-31423668 | MS.gene76620:CDS |
| GTAACAAATGTGGGTGGTGC+TGG | 0.440862 | 5.1:-31422469 | MS.gene76620:CDS |
| TACATTCAGTAGCTATTAAA+GGG | 0.441653 | 5.1:-31422441 | MS.gene76620:CDS |
| GGAATTAGGTTCACAATCAA+TGG | 0.459198 | 5.1:-31422517 | MS.gene76620:CDS |
| ACAATGCTGCCCCAGCTGGT+TGG | 0.464148 | 5.1:-31422294 | MS.gene76620:CDS |
| TCCAACAATGCTGCCCCAGC+TGG | 0.465999 | 5.1:-31422298 | MS.gene76620:CDS |
| TAACCTTGAAAGACAAAGCT+TGG | 0.500681 | 5.1:+31422347 | None:intergenic |
| TCTGCTTATGGTTATGGTGG+AGG | 0.502421 | 5.1:-31423672 | MS.gene76620:CDS |
| TTGTTCCTGTTTCTTACAGA+AGG | 0.505585 | 5.1:-31423195 | MS.gene76620:intron |
| TCCTCCATTGTTATTAGGCA+AGG | 0.509324 | 5.1:+31423294 | None:intergenic |
| AGTGATGCATCAGGAACAAT+GGG | 0.509766 | 5.1:-31423615 | MS.gene76620:intron |
| ATGGTGTGTCTAACGGAATT+GGG | 0.514181 | 5.1:+31422246 | None:intergenic |
| GTAGGGTACCCTGCAGAAGA+AGG | 0.516806 | 5.1:-31422543 | MS.gene76620:intron |
| TGACCCCAATTTCTAGACAT+TGG | 0.519449 | 5.1:+31422400 | None:intergenic |
| TATGGAGGAAGTGATGCATC+AGG | 0.519711 | 5.1:-31423624 | MS.gene76620:CDS |
| TGACCAAAAGACCAACCAGC+TGG | 0.520912 | 5.1:+31422283 | None:intergenic |
| TCATCTGCTTATGGTTATGG+TGG | 0.521601 | 5.1:-31423675 | MS.gene76620:CDS |
| TTCAACAGTGGTTTGAGCTG+TGG | 0.522814 | 5.1:-31423412 | MS.gene76620:CDS |
| AGAATTGCTCAATACAAAGC+TGG | 0.532239 | 5.1:-31423220 | MS.gene76620:CDS |
| TTATGGTTATGGTGGAGGAT+GGG | 0.534886 | 5.1:-31423667 | MS.gene76620:CDS |
| TTAGGCAAGGCATTGTTTGG+TGG | 0.537849 | 5.1:+31423307 | None:intergenic |
| AGATCAAAGTGTTGCAAAGG+AGG | 0.543969 | 5.1:+31423262 | None:intergenic |
| TTCAAGGTTACAACAAGTGA+TGG | 0.544265 | 5.1:-31422334 | MS.gene76620:CDS |
| GACCAAAAGACCAACCAGCT+GGG | 0.545554 | 5.1:+31422284 | None:intergenic |
| GCAGTGACCAAAATAGAGCC+AGG | 0.547622 | 5.1:+31423343 | None:intergenic |
| ATTCCTCCCCTTCTTCTGCA+GGG | 0.548478 | 5.1:+31422535 | None:intergenic |
| TACTAGAACTAAGTTGAAGT+AGG | 0.551749 | 5.1:+31422489 | None:intergenic |
| TAGGGTACCCTGCAGAAGAA+GGG | 0.557129 | 5.1:-31422542 | MS.gene76620:CDS |
| ACGGAATTGGGCACCAGTGT+AGG | 0.562519 | 5.1:+31422258 | None:intergenic |
| AAGTGATGCATCAGGAACAA+TGG | 0.564601 | 5.1:-31423616 | MS.gene76620:CDS |
| CTTAGTTCTAGTAACAAATG+TGG | 0.570683 | 5.1:-31422479 | MS.gene76620:CDS |
| GATCAAAGTGTTGCAAAGGA+GGG | 0.592393 | 5.1:+31423263 | None:intergenic |
| GCAAGATCAAAGTGTTGCAA+AGG | 0.592711 | 5.1:+31423259 | None:intergenic |
| TTAGTTCTAGTAACAAATGT+GGG | 0.599321 | 5.1:-31422478 | MS.gene76620:CDS |
| AATGCCTTGCCTAATAACAA+TGG | 0.606510 | 5.1:-31423298 | MS.gene76620:CDS |
| CTATTAAAGGGTCAAGAACA+GGG | 0.615693 | 5.1:-31422429 | MS.gene76620:CDS |
| ATGCCAATGTCTAGAAATTG+GGG | 0.621765 | 5.1:-31422403 | MS.gene76620:CDS |
| AGGGTACCCTGCAGAAGAAG+GGG | 0.622412 | 5.1:-31422541 | MS.gene76620:CDS |
| ACCAAAAGACCAACCAGCTG+GGG | 0.625454 | 5.1:+31422285 | None:intergenic |
| AGCACAGCTTTGTTCAACAG+TGG | 0.628810 | 5.1:-31423424 | MS.gene76620:CDS |
| TGCCTAATAACAATGGAGGA+TGG | 0.634087 | 5.1:-31423291 | MS.gene76620:CDS |
| GCACATGCAACTTTCTATGG+AGG | 0.636010 | 5.1:-31423639 | MS.gene76620:CDS |
| GCCTTGCCTAATAACAATGG+AGG | 0.642659 | 5.1:-31423295 | MS.gene76620:CDS |
| TATGGAAACCTATACAGTCA+AGG | 0.647219 | 5.1:-31423472 | MS.gene76620:CDS |
| GTACCCTGCAGAAGAAGGGG+AGG | 0.667861 | 5.1:-31422538 | MS.gene76620:CDS |
| GTTCTAGTAACAAATGTGGG+TGG | 0.696895 | 5.1:-31422475 | MS.gene76620:CDS |
| TTAAAGGGTCAAGAACAGGG+TGG | 0.777410 | 5.1:-31422426 | MS.gene76620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTATTAAAAAA+AGG | - | chr5.1:31423312-31423331 | MS.gene76620:CDS | 0.0% |
| !!! | ACTAATATTAATTATTGTTT+TGG | + | chr5.1:31423259-31423278 | None:intergenic | 10.0% |
| !!! | TTTAAAATTATTTATTAGAG+AGG | + | chr5.1:31423226-31423245 | None:intergenic | 10.0% |
| !! | ATTAAACATATTAGTCAAAA+GGG | + | chr5.1:31422453-31422472 | None:intergenic | 15.0% |
| !! | CTAATATAAAACAAAAAGTA+GGG | + | chr5.1:31422961-31422980 | None:intergenic | 15.0% |
| !! | TATTAAACATATTAGTCAAA+AGG | + | chr5.1:31422454-31422473 | None:intergenic | 15.0% |
| !! | TCTAATATAAAACAAAAAGT+AGG | + | chr5.1:31422962-31422981 | None:intergenic | 15.0% |
| !! | TTTATACTATTTAAGCAATT+TGG | - | chr5.1:31422421-31422440 | MS.gene76620:CDS | 15.0% |
| !!! | AATATTGAATTTTTTTTAGG+TGG | - | chr5.1:31422470-31422489 | MS.gene76620:CDS | 15.0% |
| !!! | TATTTTTAATCACATGTATT+TGG | - | chr5.1:31422929-31422948 | MS.gene76620:intron | 15.0% |
| !! | AGTATAAATTACTTACAACT+TGG | + | chr5.1:31423369-31423388 | None:intergenic | 20.0% |
| !! | TGAGATTAAATTTGTGTAAT+GGG | - | chr5.1:31422849-31422868 | MS.gene76620:intron | 20.0% |
| !! | TTAAACATATTAGTCAAAAG+GGG | + | chr5.1:31422452-31422471 | None:intergenic | 20.0% |
| !! | TTGAGATTAAATTTGTGTAA+TGG | - | chr5.1:31422848-31422867 | MS.gene76620:intron | 20.0% |
| !!! | GTATTTTTTTCTCTCTAAAT+GGG | - | chr5.1:31423060-31423079 | MS.gene76620:intron | 20.0% |
| !!! | TGTATTTTTTTCTCTCTAAA+TGG | - | chr5.1:31423059-31423078 | MS.gene76620:intron | 20.0% |
| ! | AAAGGACACTTATATAGAAA+AGG | - | chr5.1:31423330-31423349 | MS.gene76620:CDS | 25.0% |
| ! | AACTTTATCTAGCTAGTTAA+TGG | - | chr5.1:31423010-31423029 | MS.gene76620:intron | 25.0% |
| ! | ACTTTATCTAGCTAGTTAAT+GGG | - | chr5.1:31423011-31423030 | MS.gene76620:intron | 25.0% |
| ! | AGAAGTAATTTATTGTTGTG+TGG | - | chr5.1:31423403-31423422 | MS.gene76620:CDS | 25.0% |
| ! | CAAAGCAACAATTATCTTAA+TGG | - | chr5.1:31423605-31423624 | MS.gene76620:intron | 25.0% |
| ! | TACATTCAGTAGCTATTAAA+GGG | - | chr5.1:31423534-31423553 | MS.gene76620:intron | 25.0% |
| ! | TATTTATTAGAGAGGTGAAA+TGG | + | chr5.1:31423218-31423237 | None:intergenic | 25.0% |
| !!! | ATTAAATTTGTGTAATGGGT+TGG | - | chr5.1:31422853-31422872 | MS.gene76620:intron | 25.0% |
| !!! | TTAGTTCTAGTAACAAATGT+GGG | - | chr5.1:31423497-31423516 | MS.gene76620:intron | 25.0% |
| AATGGTACAATTATCAGTGA+AGG | + | chr5.1:31423200-31423219 | None:intergenic | 30.0% | |
| ATGGTACAATTATCAGTGAA+GGG | + | chr5.1:31423199-31423218 | None:intergenic | 30.0% | |
| ATTTACCTTCTGTAAGAAAC+AGG | + | chr5.1:31422788-31422807 | None:intergenic | 30.0% | |
| CAAAATGCAACAAAAAGTGA+AGG | + | chr5.1:31422831-31422850 | None:intergenic | 30.0% | |
| CTTTATCTAGCTAGTTAATG+GGG | - | chr5.1:31423012-31423031 | MS.gene76620:intron | 30.0% | |
| GTACATTCAGTAGCTATTAA+AGG | - | chr5.1:31423533-31423552 | MS.gene76620:intron | 30.0% | |
| ! | ACTATGTTTTCATCTGCTTA+TGG | - | chr5.1:31422291-31422310 | MS.gene76620:CDS | 30.0% |
| ! | TACTAGAACTAAGTTGAAGT+AGG | + | chr5.1:31423489-31423508 | None:intergenic | 30.0% |
| ! | TGAGCAATTCTAAGAAAAAC+AGG | + | chr5.1:31422746-31422765 | None:intergenic | 30.0% |
| ! | TTTTCATCTGCTTATGGTTA+TGG | - | chr5.1:31422297-31422316 | MS.gene76620:CDS | 30.0% |
| !! | CTTAGTTCTAGTAACAAATG+TGG | - | chr5.1:31423496-31423515 | MS.gene76620:intron | 30.0% |
| !! | GTGAAGGGTACTATATAAAA+AGG | + | chr5.1:31423184-31423203 | None:intergenic | 30.0% |
| !! | TGTCACTTTCAACTTGTAAA+TGG | - | chr5.1:31422883-31422902 | MS.gene76620:intron | 30.0% |
| AACCTATACAGTCAAGGTTA+TGG | - | chr5.1:31422509-31422528 | MS.gene76620:CDS | 35.0% | |
| AATGCACATGCAACTTTCTA+TGG | - | chr5.1:31422333-31422352 | MS.gene76620:CDS | 35.0% | |
| AATGCCTTGCCTAATAACAA+TGG | - | chr5.1:31422677-31422696 | MS.gene76620:intron | 35.0% | |
| ACATATTAGTCAAAAGGGGT+TGG | + | chr5.1:31422448-31422467 | None:intergenic | 35.0% | |
| AGAATTGCTCAATACAAAGC+TGG | - | chr5.1:31422755-31422774 | MS.gene76620:intron | 35.0% | |
| ATGCCAATGTCTAGAAATTG+GGG | - | chr5.1:31423572-31423591 | MS.gene76620:intron | 35.0% | |
| ATTGTTGTGTGGATTTGTGT+AGG | - | chr5.1:31423414-31423433 | MS.gene76620:CDS | 35.0% | |
| CTAGAAATTGGGGTCAAAAT+TGG | - | chr5.1:31423582-31423601 | MS.gene76620:intron | 35.0% | |
| CTATTAAAGGGTCAAGAACA+GGG | - | chr5.1:31423546-31423565 | MS.gene76620:intron | 35.0% | |
| GATGCCAATGTCTAGAAATT+GGG | - | chr5.1:31423571-31423590 | MS.gene76620:intron | 35.0% | |
| GGAATTAGGTTCACAATCAA+TGG | - | chr5.1:31423458-31423477 | MS.gene76620:CDS | 35.0% | |
| TAACCTTGAAAGACAAAGCT+TGG | + | chr5.1:31423631-31423650 | None:intergenic | 35.0% | |
| TATGGAAACCTATACAGTCA+AGG | - | chr5.1:31422503-31422522 | MS.gene76620:CDS | 35.0% | |
| TTCAAGGTTACAACAAGTGA+TGG | - | chr5.1:31423641-31423660 | MS.gene76620:CDS | 35.0% | |
| TTCCATAACCTTGACTGTAT+AGG | + | chr5.1:31422514-31422533 | None:intergenic | 35.0% | |
| TTGTTGTGTGGATTTGTGTA+GGG | - | chr5.1:31423415-31423434 | MS.gene76620:CDS | 35.0% | |
| ! | ACAAGTTGAAAGTGACATGA+AGG | + | chr5.1:31422880-31422899 | None:intergenic | 35.0% |
| ! | TTGTTCCTGTTTCTTACAGA+AGG | - | chr5.1:31422780-31422799 | MS.gene76620:intron | 35.0% |
| !! | TTATTAGGCAAGGCATTGTT+TGG | + | chr5.1:31422674-31422693 | None:intergenic | 35.0% |
| !!! | TTTTTTTTAGGTGGTGCATG+TGG | - | chr5.1:31422479-31422498 | MS.gene76620:CDS | 35.0% |
| AAGTGATGCATCAGGAACAA+TGG | - | chr5.1:31422359-31422378 | MS.gene76620:CDS | 40.0% | |
| AGTGATGCATCAGGAACAAT+GGG | - | chr5.1:31422360-31422379 | MS.gene76620:CDS | 40.0% | |
| ATCTAGCTAGTTAATGGGGT+TGG | - | chr5.1:31423016-31423035 | MS.gene76620:intron | 40.0% | |
| GCTATTAAAGGGTCAAGAAC+AGG | - | chr5.1:31423545-31423564 | MS.gene76620:intron | 40.0% | |
| GGATGCCAATGTCTAGAAAT+TGG | - | chr5.1:31423570-31423589 | MS.gene76620:intron | 40.0% | |
| GTTCTAGTAACAAATGTGGG+TGG | - | chr5.1:31423500-31423519 | MS.gene76620:intron | 40.0% | |
| TCATCTGCTTATGGTTATGG+TGG | - | chr5.1:31422300-31422319 | MS.gene76620:CDS | 40.0% | |
| TGCCTAATAACAATGGAGGA+TGG | - | chr5.1:31422684-31422703 | MS.gene76620:intron | 40.0% | |
| ! | CACCATCCTCCATTGTTATT+AGG | + | chr5.1:31422689-31422708 | None:intergenic | 40.0% |
| ! | TCCTCCATTGTTATTAGGCA+AGG | + | chr5.1:31422684-31422703 | None:intergenic | 40.0% |
| ! | TCTCATTGGGTTGTTCTTCA+TGG | - | chr5.1:31422260-31422279 | MS.gene76620:CDS | 40.0% |
| ! | TGACCCCAATTTCTAGACAT+TGG | + | chr5.1:31423578-31423597 | None:intergenic | 40.0% |
| ! | TTATGGTTATGGTGGAGGAT+GGG | - | chr5.1:31422308-31422327 | MS.gene76620:CDS | 40.0% |
| !! | AGATCAAAGTGTTGCAAAGG+AGG | + | chr5.1:31422716-31422735 | None:intergenic | 40.0% |
| !! | GATCAAAGTGTTGCAAAGGA+GGG | + | chr5.1:31422715-31422734 | None:intergenic | 40.0% |
| !! | GCAAGATCAAAGTGTTGCAA+AGG | + | chr5.1:31422719-31422738 | None:intergenic | 40.0% |
| !! | GTGGTTCTTGCTTTGAGATT+AGG | - | chr5.1:31422582-31422601 | MS.gene76620:intron | 40.0% |
| AGCCAGGAAGACACCATTTA+CGG | + | chr5.1:31422619-31422638 | None:intergenic | 45.0% | |
| GCACATGCAACTTTCTATGG+AGG | - | chr5.1:31422336-31422355 | MS.gene76620:CDS | 45.0% | |
| GCCTTGCCTAATAACAATGG+AGG | - | chr5.1:31422680-31422699 | MS.gene76620:intron | 45.0% | |
| TATGGAGGAAGTGATGCATC+AGG | - | chr5.1:31422351-31422370 | MS.gene76620:CDS | 45.0% | |
| TCTGCTTATGGTTATGGTGG+AGG | - | chr5.1:31422303-31422322 | MS.gene76620:CDS | 45.0% | |
| TTAAAGGGTCAAGAACAGGG+TGG | - | chr5.1:31423549-31423568 | MS.gene76620:intron | 45.0% | |
| TTAGGTGGTGCATGTGGATA+TGG | - | chr5.1:31422485-31422504 | MS.gene76620:CDS | 45.0% | |
| TTCAACAGTGGTTTGAGCTG+TGG | - | chr5.1:31422563-31422582 | MS.gene76620:intron | 45.0% | |
| ! | CTTATGGTTATGGTGGAGGA+TGG | - | chr5.1:31422307-31422326 | MS.gene76620:CDS | 45.0% |
| ! | TCTTTTGGTCAGACCTACAC+TGG | - | chr5.1:31423704-31423723 | MS.gene76620:CDS | 45.0% |
| ! | TGGCCAAGCTTTGTCTTTCA+AGG | - | chr5.1:31423625-31423644 | MS.gene76620:CDS | 45.0% |
| !! | AGCACAGCTTTGTTCAACAG+TGG | - | chr5.1:31422551-31422570 | MS.gene76620:intron | 45.0% |
| !! | TGCTTTGAGATTAGGTGTGC+TGG | - | chr5.1:31422590-31422609 | MS.gene76620:intron | 45.0% |
| !! | TTAGGCAAGGCATTGTTTGG+TGG | + | chr5.1:31422671-31422690 | None:intergenic | 45.0% |
| !!! | GTGTCTTCCTGGCTCTATTT+TGG | - | chr5.1:31422625-31422644 | MS.gene76620:intron | 45.0% |
| !!! | TTTAATATTGAATTTTTTTT+AGG | - | chr5.1:31422467-31422486 | MS.gene76620:CDS | 5.0% |
| AATTCCTCCCCTTCTTCTGC+AGG | + | chr5.1:31423444-31423463 | None:intergenic | 50.0% | |
| ACCAAAAGACCAACCAGCTG+GGG | + | chr5.1:31423693-31423712 | None:intergenic | 50.0% | |
| ATTCCTCCCCTTCTTCTGCA+GGG | + | chr5.1:31423443-31423462 | None:intergenic | 50.0% | |
| GACCAAAAGACCAACCAGCT+GGG | + | chr5.1:31423694-31423713 | None:intergenic | 50.0% | |
| GACCGTAAATGGTGTCTTCC+TGG | - | chr5.1:31422614-31422633 | MS.gene76620:intron | 50.0% | |
| GCAGAAGAAGGGGAGGAATT+AGG | - | chr5.1:31423444-31423463 | MS.gene76620:CDS | 50.0% | |
| GCAGTGACCAAAATAGAGCC+AGG | + | chr5.1:31422635-31422654 | None:intergenic | 50.0% | |
| GTAACAAATGTGGGTGGTGC+TGG | - | chr5.1:31423506-31423525 | MS.gene76620:intron | 50.0% | |
| TGACCAAAAGACCAACCAGC+TGG | + | chr5.1:31423695-31423714 | None:intergenic | 50.0% | |
| ! | TAGGGTACCCTGCAGAAGAA+GGG | - | chr5.1:31423433-31423452 | MS.gene76620:CDS | 50.0% |
| ACGGAATTGGGCACCAGTGT+AGG | + | chr5.1:31423720-31423739 | None:intergenic | 55.0% | |
| ! | AGGGTACCCTGCAGAAGAAG+GGG | - | chr5.1:31423434-31423453 | MS.gene76620:CDS | 55.0% |
| ! | GGTGTGCTGGTGACCGTAAA+TGG | - | chr5.1:31422603-31422622 | MS.gene76620:intron | 55.0% |
| ! | GTAGGGTACCCTGCAGAAGA+AGG | - | chr5.1:31423432-31423451 | MS.gene76620:CDS | 55.0% |
| ACAATGCTGCCCCAGCTGGT+TGG | - | chr5.1:31423681-31423700 | MS.gene76620:CDS | 60.0% | |
| ACCAGCTGGGGCAGCATTGT+TGG | + | chr5.1:31423681-31423700 | None:intergenic | 60.0% | |
| GTACCCTGCAGAAGAAGGGG+AGG | - | chr5.1:31423437-31423456 | MS.gene76620:CDS | 60.0% | |
| TCCAACAATGCTGCCCCAGC+TGG | - | chr5.1:31423677-31423696 | MS.gene76620:CDS | 60.0% | |
| !!! | GCCCCAGCTGGTTGGTCTTT+TGG | - | chr5.1:31423689-31423708 | MS.gene76620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 31422255 | 31423742 | 31422255 | ID=MS.gene76620 |
| chr5.1 | mRNA | 31422255 | 31423742 | 31422255 | ID=MS.gene76620.t1;Parent=MS.gene76620 |
| chr5.1 | exon | 31423616 | 31423742 | 31423616 | ID=MS.gene76620.t1.exon1;Parent=MS.gene76620.t1 |
| chr5.1 | CDS | 31423616 | 31423742 | 31423616 | ID=cds.MS.gene76620.t1;Parent=MS.gene76620.t1 |
| chr5.1 | exon | 31423196 | 31423508 | 31423196 | ID=MS.gene76620.t1.exon2;Parent=MS.gene76620.t1 |
| chr5.1 | CDS | 31423196 | 31423508 | 31423196 | ID=cds.MS.gene76620.t1;Parent=MS.gene76620.t1 |
| chr5.1 | exon | 31422255 | 31422561 | 31422255 | ID=MS.gene76620.t1.exon3;Parent=MS.gene76620.t1 |
| chr5.1 | CDS | 31422255 | 31422561 | 31422255 | ID=cds.MS.gene76620.t1;Parent=MS.gene76620.t1 |
| Gene Sequence |
| Protein sequence |
