Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76737.t1 | XP_013455188.1 | 93.3 | 313 | 21 | 0 | 1 | 313 | 9 | 321 | 3.30E-163 | 584.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76737.t1 | Q9FLC0 | 62.6 | 297 | 107 | 3 | 19 | 313 | 30 | 324 | 3.5e-97 | 356.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76737.t1 | A0A072UIE4 | 93.3 | 313 | 21 | 0 | 1 | 313 | 9 | 321 | 2.4e-163 | 584.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04926 | MS.gene76737 | 0.808768 | 2.63E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene76737 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene76737 | 0.801424 | 9.06E-49 | -1.69E-46 |
| MS.gene049634 | MS.gene76737 | 0.815337 | 9.74E-52 | -1.69E-46 |
| MS.gene050095 | MS.gene76737 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene050096 | MS.gene76737 | 0.826324 | 2.89E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene76737 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene76737 | 0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene76737 | 0.832104 | 1.14E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene76737 | 0.8191 | 1.39E-52 | -1.69E-46 |
| MS.gene051158 | MS.gene76737 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene051385 | MS.gene76737 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene051996 | MS.gene76737 | 0.829621 | 4.65E-55 | -1.69E-46 |
| MS.gene052211 | MS.gene76737 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene05233 | MS.gene76737 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene76737 | 0.838374 | 2.99E-57 | -1.69E-46 |
| MS.gene05244 | MS.gene76737 | 0.805805 | 1.12E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene76737 | 0.825723 | 4.01E-54 | -1.69E-46 |
| MS.gene053031 | MS.gene76737 | 0.84099 | 6.23E-58 | -1.69E-46 |
| MS.gene053033 | MS.gene76737 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene053403 | MS.gene76737 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene76737 | 0.859923 | 2.96E-63 | -1.69E-46 |
| MS.gene054146 | MS.gene76737 | 0.819512 | 1.12E-52 | -1.69E-46 |
| MS.gene054147 | MS.gene76737 | 0.853084 | 3.02E-61 | -1.69E-46 |
| MS.gene054181 | MS.gene76737 | 0.822783 | 1.97E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene76737 | 0.803882 | 2.82E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene76737 | 0.826752 | 2.28E-54 | -1.69E-46 |
| MS.gene054421 | MS.gene76737 | 0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene76737 | 0.877212 | 7.53E-69 | -1.69E-46 |
| MS.gene05483 | MS.gene76737 | 0.810983 | 8.79E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene76737 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene76737 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene055601 | MS.gene76737 | 0.822529 | 2.26E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene76737 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene056218 | MS.gene76737 | 0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene76737 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene76737 | 0.814467 | 1.52E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene76737 | 0.814777 | 1.30E-51 | -1.69E-46 |
| MS.gene056680 | MS.gene76737 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene76737 | 0.810137 | 1.34E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene76737 | 0.84419 | 8.81E-59 | -1.69E-46 |
| MS.gene056922 | MS.gene76737 | 0.817325 | 3.50E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene76737 | 0.828625 | 8.10E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene76737 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene76737 | 0.82377 | 1.16E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene76737 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene059037 | MS.gene76737 | 0.804879 | 1.75E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene76737 | 0.809199 | 2.13E-50 | -1.69E-46 |
| MS.gene059892 | MS.gene76737 | 0.826174 | 3.14E-54 | -1.69E-46 |
| MS.gene059944 | MS.gene76737 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene76737 | 0.813237 | 2.83E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene76737 | 0.829202 | 5.88E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76737.t1 | MTR_4g029170 | 93.291 | 313 | 21 | 0 | 1 | 313 | 9 | 321 | 0.0 | 608 |
| MS.gene76737.t1 | MTR_4g029180 | 86.218 | 312 | 43 | 0 | 2 | 313 | 10 | 321 | 0.0 | 541 |
| MS.gene76737.t1 | MTR_5g074710 | 60.568 | 317 | 119 | 4 | 1 | 313 | 7 | 321 | 1.76e-135 | 387 |
| MS.gene76737.t1 | MTR_5g074740 | 60.635 | 315 | 118 | 4 | 3 | 313 | 9 | 321 | 2.53e-134 | 384 |
| MS.gene76737.t1 | MTR_5g074860 | 59.621 | 317 | 119 | 5 | 3 | 312 | 10 | 324 | 1.59e-133 | 382 |
| MS.gene76737.t1 | MTR_5g074760 | 59.365 | 315 | 122 | 4 | 3 | 313 | 9 | 321 | 7.58e-133 | 380 |
| MS.gene76737.t1 | MTR_5g074970 | 60.127 | 316 | 122 | 2 | 1 | 313 | 12 | 326 | 1.30e-130 | 375 |
| MS.gene76737.t1 | MTR_3g466200 | 58.917 | 314 | 125 | 3 | 3 | 313 | 8 | 320 | 9.88e-127 | 365 |
| MS.gene76737.t1 | MTR_3g467600 | 57.413 | 317 | 129 | 4 | 2 | 313 | 9 | 324 | 1.77e-123 | 357 |
| MS.gene76737.t1 | MTR_3g072190 | 57.778 | 315 | 128 | 3 | 2 | 313 | 6 | 318 | 1.24e-122 | 354 |
| MS.gene76737.t1 | MTR_5g083860 | 56.230 | 313 | 132 | 4 | 3 | 313 | 16 | 325 | 2.87e-121 | 351 |
| MS.gene76737.t1 | MTR_3g094650 | 55.873 | 315 | 134 | 4 | 1 | 313 | 11 | 322 | 3.75e-121 | 350 |
| MS.gene76737.t1 | MTR_7g072510 | 57.627 | 295 | 123 | 2 | 19 | 313 | 20 | 312 | 4.29e-118 | 342 |
| MS.gene76737.t1 | MTR_2g084020 | 54.777 | 314 | 139 | 3 | 1 | 313 | 7 | 318 | 9.79e-117 | 339 |
| MS.gene76737.t1 | MTR_2g084000 | 55.556 | 315 | 135 | 5 | 2 | 313 | 7 | 319 | 2.71e-116 | 338 |
| MS.gene76737.t1 | MTR_4g029200 | 54.785 | 303 | 135 | 2 | 11 | 313 | 38 | 338 | 4.21e-116 | 338 |
| MS.gene76737.t1 | MTR_4g083710 | 54.403 | 318 | 138 | 5 | 1 | 313 | 9 | 324 | 1.16e-115 | 337 |
| MS.gene76737.t1 | MTR_2g084080 | 52.716 | 313 | 146 | 2 | 1 | 313 | 7 | 317 | 1.22e-115 | 337 |
| MS.gene76737.t1 | MTR_3g094670 | 58.249 | 297 | 120 | 3 | 19 | 313 | 28 | 322 | 3.20e-115 | 335 |
| MS.gene76737.t1 | MTR_3g094630 | 56.962 | 316 | 131 | 4 | 1 | 313 | 9 | 322 | 3.30e-115 | 335 |
| MS.gene76737.t1 | MTR_3g466180 | 56.230 | 313 | 135 | 2 | 1 | 313 | 13 | 323 | 3.38e-115 | 335 |
| MS.gene76737.t1 | MTR_7g072480 | 55.844 | 308 | 134 | 2 | 6 | 313 | 11 | 316 | 3.51e-115 | 335 |
| MS.gene76737.t1 | MTR_2g084110 | 52.716 | 313 | 146 | 2 | 1 | 313 | 7 | 317 | 5.14e-114 | 332 |
| MS.gene76737.t1 | MTR_2g084010 | 53.503 | 314 | 143 | 3 | 1 | 313 | 7 | 318 | 1.50e-113 | 331 |
| MS.gene76737.t1 | MTR_2g084090 | 52.866 | 314 | 145 | 3 | 1 | 313 | 7 | 318 | 2.10e-113 | 331 |
| MS.gene76737.t1 | MTR_5g021060 | 55.446 | 303 | 125 | 4 | 19 | 313 | 30 | 330 | 2.75e-111 | 326 |
| MS.gene76737.t1 | MTR_4g029190 | 54.949 | 293 | 128 | 3 | 23 | 313 | 50 | 340 | 5.24e-110 | 323 |
| MS.gene76737.t1 | MTR_4g074995 | 53.035 | 313 | 127 | 5 | 6 | 313 | 11 | 308 | 4.87e-109 | 319 |
| MS.gene76737.t1 | MTR_8g076820 | 54.426 | 305 | 129 | 4 | 17 | 313 | 28 | 330 | 1.75e-108 | 319 |
| MS.gene76737.t1 | MTR_1g115900 | 50.633 | 316 | 150 | 4 | 1 | 313 | 9 | 321 | 1.50e-107 | 316 |
| MS.gene76737.t1 | MTR_7g026990 | 54.636 | 302 | 133 | 4 | 13 | 313 | 24 | 322 | 6.64e-107 | 315 |
| MS.gene76737.t1 | MTR_4g074990 | 51.592 | 314 | 131 | 5 | 4 | 313 | 9 | 305 | 1.79e-104 | 308 |
| MS.gene76737.t1 | MTR_5g074860 | 50.789 | 317 | 108 | 6 | 3 | 312 | 10 | 285 | 1.01e-103 | 305 |
| MS.gene76737.t1 | MTR_3g072190 | 60.317 | 252 | 98 | 2 | 62 | 313 | 2 | 251 | 6.72e-101 | 296 |
| MS.gene76737.t1 | MTR_1g022970 | 50.820 | 305 | 139 | 4 | 18 | 313 | 45 | 347 | 7.85e-101 | 300 |
| MS.gene76737.t1 | MTR_4g125940 | 50.155 | 323 | 146 | 5 | 2 | 313 | 11 | 329 | 1.54e-99 | 296 |
| MS.gene76737.t1 | MTR_4g122640 | 49.837 | 307 | 146 | 4 | 13 | 313 | 32 | 336 | 1.50e-98 | 294 |
| MS.gene76737.t1 | MTR_2g028980 | 50.000 | 320 | 147 | 5 | 4 | 313 | 14 | 330 | 1.65e-98 | 294 |
| MS.gene76737.t1 | MTR_2g029815 | 48.438 | 320 | 154 | 4 | 3 | 313 | 13 | 330 | 1.08e-97 | 292 |
| MS.gene76737.t1 | MTR_5g014100 | 51.456 | 309 | 133 | 5 | 19 | 313 | 26 | 331 | 4.83e-97 | 290 |
| MS.gene76737.t1 | MTR_2g029820 | 48.276 | 319 | 154 | 4 | 4 | 313 | 14 | 330 | 1.47e-96 | 289 |
| MS.gene76737.t1 | MTR_2g029800 | 47.962 | 319 | 155 | 4 | 4 | 313 | 14 | 330 | 2.74e-96 | 288 |
| MS.gene76737.t1 | MTR_7g093370 | 46.875 | 320 | 158 | 5 | 4 | 313 | 54 | 371 | 4.50e-96 | 289 |
| MS.gene76737.t1 | MTR_2g029860 | 49.342 | 304 | 143 | 4 | 19 | 313 | 29 | 330 | 6.67e-96 | 288 |
| MS.gene76737.t1 | MTR_5g017850 | 45.483 | 321 | 164 | 4 | 1 | 313 | 9 | 326 | 8.84e-96 | 286 |
| MS.gene76737.t1 | MTR_1g054205 | 48.197 | 305 | 146 | 5 | 19 | 313 | 24 | 326 | 1.15e-95 | 286 |
| MS.gene76737.t1 | MTR_2g040000 | 46.462 | 325 | 158 | 5 | 1 | 313 | 11 | 331 | 2.92e-95 | 285 |
| MS.gene76737.t1 | MTR_2g029850 | 47.962 | 319 | 155 | 4 | 4 | 313 | 14 | 330 | 2.81e-94 | 283 |
| MS.gene76737.t1 | MTR_5g017860 | 45.171 | 321 | 165 | 4 | 1 | 313 | 9 | 326 | 4.89e-94 | 282 |
| MS.gene76737.t1 | MTR_2g029750 | 46.082 | 319 | 161 | 4 | 4 | 313 | 14 | 330 | 1.30e-93 | 282 |
| MS.gene76737.t1 | MTR_2g029830 | 48.684 | 304 | 145 | 4 | 19 | 313 | 28 | 329 | 6.32e-93 | 280 |
| MS.gene76737.t1 | MTR_4g074980 | 47.756 | 312 | 135 | 8 | 4 | 313 | 9 | 294 | 1.79e-92 | 276 |
| MS.gene76737.t1 | MTR_5g049280 | 48.208 | 307 | 145 | 7 | 19 | 313 | 33 | 337 | 3.96e-92 | 277 |
| MS.gene76737.t1 | MTR_2g029560 | 44.892 | 323 | 161 | 6 | 1 | 313 | 10 | 325 | 2.97e-91 | 275 |
| MS.gene76737.t1 | MTR_2g029740 | 45.455 | 319 | 163 | 4 | 4 | 313 | 14 | 330 | 7.27e-91 | 275 |
| MS.gene76737.t1 | MTR_2g029910 | 45.312 | 320 | 163 | 5 | 4 | 313 | 15 | 332 | 5.31e-89 | 270 |
| MS.gene76737.t1 | MTR_4g125940 | 52.708 | 277 | 116 | 5 | 48 | 313 | 2 | 274 | 5.97e-89 | 267 |
| MS.gene76737.t1 | MTR_4g030890 | 47.419 | 310 | 149 | 6 | 12 | 313 | 93 | 396 | 1.40e-87 | 268 |
| MS.gene76737.t1 | MTR_4g074980 | 53.846 | 247 | 107 | 5 | 4 | 245 | 9 | 253 | 3.69e-87 | 261 |
| MS.gene76737.t1 | MTR_2g029730 | 45.625 | 320 | 161 | 5 | 4 | 313 | 10 | 326 | 1.89e-86 | 263 |
| MS.gene76737.t1 | MTR_4g031140 | 45.779 | 308 | 153 | 6 | 14 | 313 | 23 | 324 | 1.52e-85 | 261 |
| MS.gene76737.t1 | MTR_2g088770 | 42.368 | 321 | 172 | 7 | 2 | 313 | 9 | 325 | 3.54e-82 | 251 |
| MS.gene76737.t1 | MTR_8g075100 | 42.208 | 308 | 163 | 6 | 13 | 313 | 20 | 319 | 1.53e-80 | 247 |
| MS.gene76737.t1 | MTR_0155s0040 | 41.275 | 298 | 167 | 6 | 17 | 313 | 25 | 315 | 4.55e-80 | 246 |
| MS.gene76737.t1 | MTR_1g101830 | 40.625 | 320 | 175 | 7 | 2 | 313 | 10 | 322 | 1.11e-78 | 243 |
| MS.gene76737.t1 | MTR_1g086320 | 43.034 | 323 | 169 | 6 | 4 | 313 | 13 | 333 | 1.41e-78 | 243 |
| MS.gene76737.t1 | MTR_7g029030 | 40.881 | 318 | 180 | 6 | 1 | 313 | 6 | 320 | 1.84e-78 | 242 |
| MS.gene76737.t1 | MTR_5g022870 | 40.566 | 318 | 174 | 6 | 3 | 313 | 7 | 316 | 1.87e-78 | 242 |
| MS.gene76737.t1 | MTR_4g046713 | 40.252 | 318 | 179 | 5 | 4 | 313 | 12 | 326 | 3.73e-77 | 239 |
| MS.gene76737.t1 | MTR_1g077000 | 41.892 | 296 | 164 | 6 | 19 | 313 | 39 | 327 | 4.72e-77 | 238 |
| MS.gene76737.t1 | MTR_2g008710 | 41.846 | 325 | 170 | 7 | 1 | 313 | 8 | 325 | 7.47e-77 | 238 |
| MS.gene76737.t1 | MTR_1g025980 | 41.456 | 316 | 170 | 6 | 1 | 309 | 7 | 314 | 8.54e-77 | 238 |
| MS.gene76737.t1 | MTR_1g086490 | 42.900 | 331 | 165 | 7 | 4 | 313 | 13 | 340 | 8.99e-77 | 238 |
| MS.gene76737.t1 | MTR_3g092990 | 40.439 | 319 | 180 | 4 | 3 | 313 | 10 | 326 | 1.05e-76 | 238 |
| MS.gene76737.t1 | MTR_2g029830 | 49.612 | 258 | 119 | 4 | 65 | 313 | 6 | 261 | 1.57e-76 | 236 |
| MS.gene76737.t1 | MTR_5g074700 | 54.825 | 228 | 87 | 5 | 88 | 313 | 1 | 214 | 1.63e-76 | 233 |
| MS.gene76737.t1 | MTR_4g114210 | 42.105 | 323 | 166 | 7 | 3 | 313 | 7 | 320 | 1.83e-73 | 229 |
| MS.gene76737.t1 | MTR_1g009750 | 41.176 | 323 | 176 | 8 | 2 | 313 | 9 | 328 | 1.83e-73 | 229 |
| MS.gene76737.t1 | MTR_7g086870 | 40.203 | 296 | 170 | 5 | 19 | 313 | 22 | 311 | 3.55e-72 | 226 |
| MS.gene76737.t1 | MTR_1g038680 | 41.391 | 302 | 164 | 6 | 23 | 313 | 33 | 332 | 2.02e-70 | 222 |
| MS.gene76737.t1 | MTR_4g087965 | 41.905 | 315 | 169 | 7 | 7 | 309 | 30 | 342 | 5.35e-70 | 221 |
| MS.gene76737.t1 | MTR_1g090760 | 39.564 | 321 | 181 | 7 | 4 | 313 | 12 | 330 | 2.91e-69 | 219 |
| MS.gene76737.t1 | MTR_6g027440 | 37.107 | 318 | 184 | 7 | 1 | 313 | 8 | 314 | 4.18e-69 | 218 |
| MS.gene76737.t1 | MTR_7g107520 | 38.509 | 322 | 182 | 7 | 2 | 313 | 5 | 320 | 5.17e-69 | 218 |
| MS.gene76737.t1 | MTR_4g095450 | 39.809 | 314 | 182 | 5 | 1 | 309 | 9 | 320 | 1.16e-68 | 217 |
| MS.gene76737.t1 | MTR_2g008160 | 41.558 | 308 | 163 | 6 | 17 | 313 | 22 | 323 | 1.38e-68 | 217 |
| MS.gene76737.t1 | MTR_5g016010 | 38.245 | 319 | 183 | 6 | 1 | 309 | 11 | 325 | 2.26e-68 | 216 |
| MS.gene76737.t1 | MTR_4g133800 | 40.468 | 299 | 160 | 7 | 23 | 313 | 45 | 333 | 6.92e-68 | 215 |
| MS.gene76737.t1 | MTR_2g437770 | 42.006 | 319 | 165 | 9 | 4 | 313 | 34 | 341 | 6.94e-68 | 216 |
| MS.gene76737.t1 | MTR_6g043280 | 40.000 | 300 | 173 | 6 | 16 | 313 | 38 | 332 | 1.04e-67 | 215 |
| MS.gene76737.t1 | MTR_4g127670 | 40.461 | 304 | 168 | 6 | 19 | 313 | 24 | 323 | 7.11e-67 | 212 |
| MS.gene76737.t1 | MTR_3g072210 | 56.989 | 186 | 77 | 3 | 130 | 313 | 54 | 238 | 3.81e-65 | 205 |
| MS.gene76737.t1 | MTR_7g086820 | 36.333 | 300 | 179 | 5 | 19 | 313 | 20 | 312 | 5.71e-65 | 207 |
| MS.gene76737.t1 | MTR_3g092990 | 38.245 | 319 | 176 | 5 | 3 | 313 | 10 | 315 | 9.54e-65 | 206 |
| MS.gene76737.t1 | MTR_8g062780 | 36.137 | 321 | 194 | 5 | 2 | 313 | 6 | 324 | 4.02e-64 | 205 |
| MS.gene76737.t1 | MTR_2g099175 | 37.855 | 317 | 178 | 6 | 9 | 313 | 26 | 335 | 1.72e-63 | 204 |
| MS.gene76737.t1 | MTR_0286s0010 | 36.250 | 320 | 194 | 6 | 2 | 313 | 17 | 334 | 2.62e-63 | 203 |
| MS.gene76737.t1 | MTR_6g008075 | 36.250 | 320 | 194 | 6 | 2 | 313 | 17 | 334 | 2.62e-63 | 203 |
| MS.gene76737.t1 | MTR_1g009750 | 38.199 | 322 | 170 | 9 | 2 | 313 | 9 | 311 | 4.22e-63 | 202 |
| MS.gene76737.t1 | MTR_2g077990 | 38.623 | 334 | 163 | 8 | 17 | 311 | 74 | 404 | 1.29e-62 | 204 |
| MS.gene76737.t1 | MTR_2g078610 | 38.323 | 334 | 164 | 8 | 17 | 311 | 74 | 404 | 1.53e-62 | 204 |
| MS.gene76737.t1 | MTR_6g043460 | 36.223 | 323 | 191 | 6 | 2 | 313 | 10 | 328 | 2.37e-62 | 201 |
| MS.gene76737.t1 | MTR_2g067440 | 38.323 | 334 | 163 | 9 | 17 | 312 | 58 | 386 | 7.19e-62 | 201 |
| MS.gene76737.t1 | MTR_6g043240 | 35.783 | 313 | 194 | 6 | 2 | 313 | 25 | 331 | 2.47e-61 | 199 |
| MS.gene76737.t1 | MTR_2g008730 | 38.462 | 325 | 157 | 7 | 1 | 313 | 8 | 301 | 1.31e-59 | 193 |
| MS.gene76737.t1 | MTR_4g132490 | 34.551 | 301 | 189 | 4 | 19 | 313 | 29 | 327 | 3.27e-58 | 190 |
| MS.gene76737.t1 | MTR_3g105790 | 36.760 | 321 | 187 | 5 | 3 | 313 | 8 | 322 | 6.49e-57 | 187 |
| MS.gene76737.t1 | MTR_2g078280 | 37.578 | 322 | 159 | 8 | 17 | 299 | 74 | 392 | 1.01e-55 | 186 |
| MS.gene76737.t1 | MTR_2g008160 | 38.079 | 302 | 147 | 6 | 17 | 313 | 22 | 288 | 2.47e-54 | 179 |
| MS.gene76737.t1 | MTR_1g066380 | 34.653 | 303 | 190 | 5 | 16 | 313 | 24 | 323 | 5.68e-53 | 176 |
| MS.gene76737.t1 | MTR_7g072490 | 43.802 | 242 | 80 | 4 | 65 | 306 | 2 | 187 | 7.12e-53 | 172 |
| MS.gene76737.t1 | MTR_1g066710 | 35.430 | 302 | 187 | 5 | 17 | 313 | 25 | 323 | 1.73e-52 | 175 |
| MS.gene76737.t1 | MTR_1g066640 | 35.762 | 302 | 186 | 5 | 17 | 313 | 25 | 323 | 2.17e-51 | 172 |
| MS.gene76737.t1 | MTR_5g033470 | 31.922 | 307 | 195 | 6 | 19 | 313 | 73 | 377 | 2.17e-51 | 174 |
| MS.gene76737.t1 | MTR_4g132110 | 33.113 | 302 | 194 | 5 | 17 | 313 | 30 | 328 | 9.66e-50 | 168 |
| MS.gene76737.t1 | MTR_1g066680 | 34.437 | 302 | 189 | 6 | 17 | 313 | 25 | 322 | 1.75e-49 | 167 |
| MS.gene76737.t1 | MTR_2g067450 | 36.482 | 307 | 178 | 9 | 17 | 312 | 9 | 309 | 1.60e-48 | 164 |
| MS.gene76737.t1 | MTR_4g132110 | 32.573 | 307 | 194 | 6 | 17 | 313 | 30 | 333 | 1.94e-47 | 162 |
| MS.gene76737.t1 | MTR_0147s0010 | 31.153 | 321 | 178 | 7 | 19 | 312 | 77 | 381 | 3.85e-44 | 155 |
| MS.gene76737.t1 | MTR_2g008160 | 46.023 | 176 | 89 | 4 | 17 | 192 | 22 | 191 | 8.39e-44 | 149 |
| MS.gene76737.t1 | MTR_2g029880 | 43.229 | 192 | 87 | 5 | 132 | 313 | 9 | 188 | 1.07e-41 | 144 |
| MS.gene76737.t1 | MTR_3g072260 | 58.647 | 133 | 46 | 3 | 2 | 128 | 5 | 134 | 1.75e-41 | 141 |
| MS.gene76737.t1 | MTR_1g066380 | 33.984 | 256 | 161 | 5 | 63 | 313 | 3 | 255 | 3.88e-41 | 144 |
| MS.gene76737.t1 | MTR_3g105790 | 37.344 | 241 | 140 | 3 | 82 | 313 | 8 | 246 | 3.03e-39 | 139 |
| MS.gene76737.t1 | MTR_3g086710 | 84.375 | 64 | 10 | 0 | 1 | 64 | 1 | 64 | 1.34e-31 | 114 |
| MS.gene76737.t1 | MTR_2g078560 | 33.482 | 224 | 108 | 6 | 125 | 309 | 95 | 316 | 1.23e-29 | 115 |
| MS.gene76737.t1 | MTR_2g077980 | 33.333 | 276 | 135 | 9 | 81 | 311 | 11 | 282 | 1.36e-29 | 114 |
| MS.gene76737.t1 | MTR_3g462850 | 45.390 | 141 | 65 | 5 | 185 | 313 | 9 | 149 | 3.26e-28 | 107 |
| MS.gene76737.t1 | MTR_5g058120 | 35.714 | 154 | 95 | 2 | 156 | 309 | 6 | 155 | 1.02e-22 | 95.1 |
| MS.gene76737.t1 | MTR_5g074770 | 49.462 | 93 | 44 | 2 | 222 | 312 | 17 | 108 | 1.37e-22 | 90.9 |
| MS.gene76737.t1 | MTR_7g086790 | 39.344 | 122 | 68 | 3 | 66 | 187 | 17 | 132 | 3.67e-20 | 86.7 |
| MS.gene76737.t1 | MTR_1g089005 | 38.636 | 132 | 73 | 3 | 6 | 131 | 2 | 131 | 5.50e-19 | 82.4 |
| MS.gene76737.t1 | MTR_4g114220 | 51.807 | 83 | 29 | 3 | 45 | 127 | 29 | 100 | 2.49e-17 | 77.8 |
| MS.gene76737.t1 | MTR_6g048160 | 56.338 | 71 | 26 | 3 | 58 | 128 | 22 | 87 | 1.03e-16 | 74.3 |
| MS.gene76737.t1 | MTR_4g031040 | 35.294 | 170 | 69 | 5 | 78 | 246 | 1 | 130 | 7.49e-16 | 73.6 |
| MS.gene76737.t1 | MTR_2g029930 | 35.185 | 108 | 45 | 2 | 1 | 97 | 1 | 94 | 8.61e-15 | 69.7 |
| MS.gene76737.t1 | MTR_1g098320 | 41.026 | 78 | 46 | 0 | 236 | 313 | 47 | 124 | 1.52e-14 | 70.1 |
| MS.gene76737.t1 | MTR_3g088160 | 28.462 | 260 | 143 | 11 | 53 | 295 | 121 | 354 | 2.29e-14 | 73.6 |
| MS.gene76737.t1 | MTR_3g088160 | 28.846 | 260 | 142 | 11 | 53 | 295 | 121 | 354 | 2.42e-14 | 73.2 |
| MS.gene76737.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 19 | 86 | 77 | 144 | 5.20e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76737.t1 | AT5G05340 | 62.626 | 297 | 107 | 3 | 19 | 313 | 30 | 324 | 1.76e-129 | 372 |
| MS.gene76737.t1 | AT1G14550 | 53.333 | 315 | 142 | 4 | 3 | 313 | 8 | 321 | 3.65e-113 | 330 |
| MS.gene76737.t1 | AT5G58400 | 53.185 | 314 | 144 | 2 | 2 | 313 | 13 | 325 | 2.87e-112 | 328 |
| MS.gene76737.t1 | AT5G58390 | 55.128 | 312 | 137 | 2 | 4 | 313 | 6 | 316 | 5.80e-112 | 327 |
| MS.gene76737.t1 | AT4G36430 | 53.465 | 303 | 131 | 4 | 19 | 313 | 30 | 330 | 3.28e-110 | 323 |
| MS.gene76737.t1 | AT1G14540 | 52.698 | 315 | 145 | 4 | 1 | 313 | 3 | 315 | 6.60e-110 | 322 |
| MS.gene76737.t1 | AT2G18150 | 53.135 | 303 | 132 | 4 | 19 | 313 | 36 | 336 | 9.56e-110 | 322 |
| MS.gene76737.t1 | AT2G18140 | 53.135 | 303 | 132 | 4 | 19 | 313 | 35 | 335 | 1.66e-107 | 317 |
| MS.gene76737.t1 | AT5G06720 | 49.530 | 319 | 150 | 4 | 4 | 313 | 17 | 333 | 1.45e-104 | 309 |
| MS.gene76737.t1 | AT3G50990 | 50.000 | 310 | 145 | 4 | 12 | 313 | 34 | 341 | 1.50e-104 | 309 |
| MS.gene76737.t1 | AT5G66390 | 49.530 | 319 | 151 | 4 | 3 | 313 | 17 | 333 | 7.91e-103 | 305 |
| MS.gene76737.t1 | AT1G44970 | 50.654 | 306 | 140 | 4 | 17 | 313 | 43 | 346 | 8.61e-103 | 305 |
| MS.gene76737.t1 | AT5G06730 | 46.395 | 319 | 160 | 4 | 4 | 313 | 18 | 334 | 4.58e-98 | 293 |
| MS.gene76737.t1 | AT3G32980 | 48.366 | 306 | 145 | 5 | 19 | 313 | 31 | 334 | 7.15e-96 | 287 |
| MS.gene76737.t1 | AT3G49110 | 49.020 | 306 | 143 | 5 | 19 | 313 | 33 | 336 | 7.22e-95 | 285 |
| MS.gene76737.t1 | AT3G49120 | 46.965 | 313 | 153 | 5 | 12 | 313 | 25 | 335 | 2.72e-93 | 281 |
| MS.gene76737.t1 | AT2G35380 | 48.466 | 326 | 147 | 7 | 6 | 313 | 13 | 335 | 1.80e-92 | 278 |
| MS.gene76737.t1 | AT4G08770 | 48.366 | 306 | 145 | 5 | 19 | 313 | 24 | 327 | 3.07e-92 | 278 |
| MS.gene76737.t1 | AT1G49570 | 47.855 | 303 | 146 | 5 | 17 | 309 | 46 | 346 | 2.92e-91 | 276 |
| MS.gene76737.t1 | AT1G68850 | 45.455 | 308 | 153 | 6 | 19 | 313 | 30 | 335 | 1.14e-90 | 274 |
| MS.gene76737.t1 | AT4G16270 | 48.658 | 298 | 141 | 5 | 24 | 313 | 55 | 348 | 1.61e-90 | 274 |
| MS.gene76737.t1 | AT4G08780 | 47.059 | 306 | 149 | 5 | 19 | 313 | 24 | 327 | 8.69e-90 | 272 |
| MS.gene76737.t1 | AT5G19890 | 47.484 | 318 | 146 | 8 | 8 | 313 | 19 | 327 | 8.70e-90 | 271 |
| MS.gene76737.t1 | AT2G38380 | 45.820 | 323 | 158 | 7 | 5 | 313 | 14 | 333 | 6.24e-89 | 270 |
| MS.gene76737.t1 | AT2G38390 | 44.551 | 312 | 161 | 5 | 12 | 313 | 24 | 333 | 7.48e-87 | 264 |
| MS.gene76737.t1 | AT5G19880 | 43.789 | 322 | 165 | 6 | 6 | 313 | 10 | 329 | 7.17e-83 | 253 |
| MS.gene76737.t1 | AT2G22420 | 42.587 | 317 | 168 | 6 | 6 | 313 | 8 | 319 | 6.14e-82 | 251 |
| MS.gene76737.t1 | AT3G01190 | 42.188 | 320 | 167 | 8 | 2 | 313 | 12 | 321 | 5.09e-80 | 246 |
| MS.gene76737.t1 | AT5G42180 | 40.566 | 318 | 175 | 5 | 1 | 311 | 5 | 315 | 1.47e-79 | 244 |
| MS.gene76737.t1 | AT1G71695 | 42.525 | 301 | 168 | 4 | 16 | 313 | 41 | 339 | 5.34e-79 | 244 |
| MS.gene76737.t1 | AT5G15180 | 41.587 | 315 | 171 | 7 | 7 | 313 | 20 | 329 | 3.23e-77 | 239 |
| MS.gene76737.t1 | AT5G64120 | 41.776 | 304 | 164 | 5 | 16 | 313 | 32 | 328 | 4.43e-77 | 239 |
| MS.gene76737.t1 | AT1G05260 | 41.379 | 319 | 174 | 7 | 4 | 313 | 11 | 325 | 6.71e-77 | 238 |
| MS.gene76737.t1 | AT5G51890 | 42.056 | 321 | 168 | 9 | 4 | 313 | 9 | 322 | 8.59e-77 | 238 |
| MS.gene76737.t1 | AT3G03670 | 40.062 | 322 | 177 | 6 | 2 | 313 | 6 | 321 | 7.04e-76 | 235 |
| MS.gene76737.t1 | AT3G21770 | 42.244 | 303 | 162 | 7 | 19 | 312 | 29 | 327 | 5.00e-75 | 233 |
| MS.gene76737.t1 | AT4G11290 | 39.441 | 322 | 182 | 7 | 2 | 313 | 8 | 326 | 4.29e-74 | 231 |
| MS.gene76737.t1 | AT4G33420 | 42.568 | 296 | 162 | 6 | 19 | 313 | 37 | 325 | 6.09e-74 | 231 |
| MS.gene76737.t1 | AT4G33420 | 42.568 | 296 | 162 | 6 | 19 | 313 | 84 | 372 | 2.78e-73 | 230 |
| MS.gene76737.t1 | AT2G41480 | 41.104 | 326 | 171 | 8 | 2 | 313 | 10 | 328 | 7.67e-73 | 228 |
| MS.gene76737.t1 | AT5G17820 | 38.730 | 315 | 174 | 6 | 6 | 313 | 11 | 313 | 1.61e-72 | 226 |
| MS.gene76737.t1 | AT5G40150 | 41.558 | 308 | 174 | 5 | 10 | 313 | 23 | 328 | 3.13e-72 | 226 |
| MS.gene76737.t1 | AT1G05240 | 40.984 | 305 | 165 | 7 | 19 | 313 | 26 | 325 | 7.65e-72 | 225 |
| MS.gene76737.t1 | AT1G05250 | 40.984 | 305 | 165 | 7 | 19 | 313 | 26 | 325 | 7.65e-72 | 225 |
| MS.gene76737.t1 | AT5G17820 | 38.730 | 315 | 174 | 6 | 6 | 313 | 64 | 366 | 1.24e-71 | 226 |
| MS.gene76737.t1 | AT5G14130 | 38.629 | 321 | 185 | 6 | 1 | 313 | 14 | 330 | 6.41e-71 | 223 |
| MS.gene76737.t1 | AT5G14130 | 38.629 | 321 | 185 | 6 | 1 | 313 | 55 | 371 | 1.36e-70 | 223 |
| MS.gene76737.t1 | AT5G39580 | 40.625 | 320 | 172 | 7 | 1 | 313 | 11 | 319 | 2.06e-70 | 221 |
| MS.gene76737.t1 | AT2G18980 | 39.062 | 320 | 179 | 6 | 4 | 313 | 10 | 323 | 2.69e-70 | 221 |
| MS.gene76737.t1 | AT2G35380 | 50.400 | 250 | 107 | 6 | 78 | 313 | 1 | 247 | 2.04e-69 | 216 |
| MS.gene76737.t1 | AT3G28200 | 40.264 | 303 | 176 | 5 | 14 | 313 | 16 | 316 | 1.98e-68 | 216 |
| MS.gene76737.t1 | AT4G26010 | 38.854 | 314 | 180 | 7 | 1 | 313 | 7 | 309 | 3.18e-68 | 215 |
| MS.gene76737.t1 | AT4G30170 | 40.000 | 305 | 167 | 7 | 19 | 313 | 27 | 325 | 6.81e-68 | 215 |
| MS.gene76737.t1 | AT4G26010 | 38.854 | 314 | 180 | 7 | 1 | 313 | 35 | 337 | 7.17e-68 | 215 |
| MS.gene76737.t1 | AT5G67400 | 37.975 | 316 | 184 | 5 | 4 | 309 | 12 | 325 | 3.28e-67 | 213 |
| MS.gene76737.t1 | AT1G30870 | 42.157 | 306 | 155 | 8 | 19 | 313 | 51 | 345 | 1.12e-66 | 213 |
| MS.gene76737.t1 | AT4G37530 | 39.667 | 300 | 171 | 4 | 19 | 309 | 27 | 325 | 3.52e-66 | 211 |
| MS.gene76737.t1 | AT5G47000 | 37.931 | 319 | 188 | 7 | 1 | 313 | 16 | 330 | 1.46e-65 | 209 |
| MS.gene76737.t1 | AT3G49960 | 37.025 | 316 | 187 | 5 | 4 | 309 | 12 | 325 | 1.12e-64 | 207 |
| MS.gene76737.t1 | AT4G33870 | 34.320 | 338 | 177 | 6 | 17 | 312 | 66 | 400 | 1.36e-64 | 209 |
| MS.gene76737.t1 | AT5G64110 | 40.923 | 325 | 169 | 8 | 2 | 313 | 16 | 330 | 7.74e-64 | 205 |
| MS.gene76737.t1 | AT5G64100 | 40.594 | 303 | 160 | 7 | 21 | 313 | 39 | 331 | 2.69e-63 | 203 |
| MS.gene76737.t1 | AT4G31760 | 37.888 | 322 | 184 | 5 | 1 | 313 | 12 | 326 | 4.60e-63 | 202 |
| MS.gene76737.t1 | AT4G17690 | 37.662 | 308 | 186 | 5 | 10 | 313 | 17 | 322 | 4.70e-63 | 202 |
| MS.gene76737.t1 | AT1G24110 | 38.284 | 303 | 177 | 6 | 19 | 313 | 22 | 322 | 1.44e-62 | 201 |
| MS.gene76737.t1 | AT4G37520 | 38.411 | 302 | 176 | 4 | 17 | 309 | 25 | 325 | 2.77e-62 | 201 |
| MS.gene76737.t1 | AT1G34510 | 36.570 | 309 | 187 | 6 | 6 | 313 | 9 | 309 | 1.32e-61 | 198 |
| MS.gene76737.t1 | AT5G22410 | 35.714 | 322 | 186 | 10 | 1 | 310 | 10 | 322 | 1.62e-61 | 199 |
| MS.gene76737.t1 | AT2G39040 | 40.514 | 311 | 163 | 11 | 19 | 313 | 46 | 350 | 1.08e-60 | 197 |
| MS.gene76737.t1 | AT4G37520 | 38.079 | 302 | 174 | 5 | 17 | 309 | 25 | 322 | 1.44e-60 | 196 |
| MS.gene76737.t1 | AT4G25980 | 36.977 | 311 | 178 | 6 | 15 | 313 | 22 | 326 | 3.00e-58 | 190 |
| MS.gene76737.t1 | AT4G37530 | 40.784 | 255 | 141 | 4 | 17 | 262 | 25 | 278 | 1.29e-57 | 187 |
| MS.gene76737.t1 | AT2G24800 | 36.364 | 308 | 180 | 5 | 16 | 313 | 28 | 329 | 2.61e-57 | 188 |
| MS.gene76737.t1 | AT2G34060 | 38.158 | 304 | 174 | 7 | 19 | 310 | 42 | 343 | 3.21e-57 | 188 |
| MS.gene76737.t1 | AT1G77100 | 38.125 | 320 | 185 | 9 | 1 | 313 | 6 | 319 | 5.05e-57 | 187 |
| MS.gene76737.t1 | AT5G24070 | 37.217 | 309 | 172 | 8 | 19 | 313 | 35 | 335 | 1.76e-56 | 186 |
| MS.gene76737.t1 | AT2G43480 | 36.102 | 313 | 178 | 8 | 15 | 313 | 31 | 335 | 9.63e-55 | 181 |
| MS.gene76737.t1 | AT2G37130 | 36.213 | 301 | 183 | 6 | 19 | 313 | 30 | 327 | 3.87e-53 | 177 |
| MS.gene76737.t1 | AT2G37130 | 36.242 | 298 | 181 | 6 | 22 | 313 | 2 | 296 | 4.06e-53 | 176 |
| MS.gene76737.t1 | AT4G21960 | 33.538 | 325 | 197 | 6 | 5 | 313 | 6 | 327 | 6.63e-53 | 176 |
| MS.gene76737.t1 | AT3G17070 | 34.951 | 309 | 180 | 8 | 19 | 313 | 38 | 339 | 3.19e-48 | 164 |
| MS.gene76737.t1 | AT5G39580 | 40.385 | 208 | 109 | 6 | 1 | 208 | 11 | 203 | 7.01e-40 | 140 |
| MS.gene76737.t1 | AT4G25980 | 42.458 | 179 | 97 | 4 | 14 | 192 | 66 | 238 | 3.26e-38 | 137 |
| MS.gene76737.t1 | AT3G17070 | 34.831 | 267 | 152 | 9 | 61 | 313 | 18 | 276 | 1.01e-36 | 133 |
| MS.gene76737.t1 | AT2G24800 | 41.520 | 171 | 94 | 3 | 16 | 186 | 28 | 192 | 6.05e-35 | 127 |
| MS.gene76737.t1 | AT4G32320 | 30.292 | 274 | 116 | 11 | 39 | 294 | 105 | 321 | 7.16e-18 | 83.2 |
| MS.gene76737.t1 | AT1G77490 | 24.615 | 260 | 153 | 9 | 53 | 295 | 106 | 339 | 3.07e-13 | 70.1 |
| MS.gene76737.t1 | AT1G77490 | 24.615 | 260 | 153 | 9 | 53 | 295 | 106 | 339 | 3.84e-13 | 70.1 |
| MS.gene76737.t1 | AT4G35970 | 26.953 | 256 | 129 | 9 | 32 | 276 | 13 | 221 | 7.48e-12 | 64.3 |
Find 51 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGCTGAATTTAAATT+TGG | 0.113514 | 4.1:-70805827 | None:intergenic |
| CAATATCTTGATGAATTAAT+TGG | 0.179883 | 4.1:-70807304 | None:intergenic |
| GTTGGAGTCTCCTCCTTCTC+TGG | 0.261467 | 4.1:-70807031 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.1:+70805853 | MS.gene76737:CDS |
| CTAATAGTGCTCAAAGCATT+AGG | 0.267809 | 4.1:-70804872 | None:intergenic |
| TCGGATCAGGAATTATTAAA+TGG | 0.273047 | 4.1:+70807138 | MS.gene76737:CDS |
| GGAAATATTAAGACACTTAC+TGG | 0.289226 | 4.1:+70807246 | MS.gene76737:CDS |
| TTATTAAATGGTGATTATAC+TGG | 0.313939 | 4.1:+70807150 | MS.gene76737:CDS |
| AGTCGTGCCGCTGCAGATTC+AGG | 0.315066 | 4.1:+70806811 | MS.gene76737:CDS |
| CAAGACCTAGTTGCCCTATC+TGG | 0.325032 | 4.1:+70806904 | MS.gene76737:CDS |
| CATCGAAAATTTCGACAATC+AGG | 0.335655 | 4.1:+70806870 | MS.gene76737:CDS |
| TGCGAAATCTATGATTAAGA+TGG | 0.368103 | 4.1:+70807224 | MS.gene76737:CDS |
| AAAGAAAGGGCTTCTTCATT+CGG | 0.378097 | 4.1:+70807119 | MS.gene76737:CDS |
| CCTAGTTGCACTTTCCATGA+TGG | 0.386662 | 4.1:-70806766 | None:intergenic |
| CTATCTGGAGCACACACTAT+TGG | 0.391267 | 4.1:+70806919 | MS.gene76737:CDS |
| CAATAGTGTGTGCTCCAGAT+AGG | 0.400931 | 4.1:-70806918 | None:intergenic |
| TAATAGTGCTCAAAGCATTA+GGG | 0.431156 | 4.1:-70804871 | None:intergenic |
| AGAAAGACTGAATGATGGTC+TGG | 0.443512 | 4.1:-70806842 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.1:+70805907 | MS.gene76737:CDS |
| AGGGCTTCTTCATTCGGATC+AGG | 0.466116 | 4.1:+70807125 | MS.gene76737:CDS |
| TTGGAGTCTCCTCCTTCTCT+GGG | 0.488124 | 4.1:-70807030 | None:intergenic |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.1:-70805902 | None:intergenic |
| GCGAAATCTATGATTAAGAT+GGG | 0.499275 | 4.1:+70807225 | MS.gene76737:CDS |
| GATCGTTGGTTAGAAAATAT+AGG | 0.503912 | 4.1:+70807172 | MS.gene76737:CDS |
| GTGAAATTCGTTCAAACTGC+AGG | 0.508334 | 4.1:+70807277 | MS.gene76737:CDS |
| ATTTGATGTGTCATATTACC+AGG | 0.518981 | 4.1:+70807086 | MS.gene76737:CDS |
| CCAAATTTAAATTCAGCTAG+AGG | 0.524290 | 4.1:+70805827 | MS.gene76737:CDS |
| ACAGTCTAGAGCTGCAAGGT+TGG | 0.528477 | 4.1:-70807049 | None:intergenic |
| TCTAGACTCTACACCTTCGA+TGG | 0.530212 | 4.1:+70805784 | MS.gene76737:CDS |
| GTGCTCCAGATAGGGCAACT+AGG | 0.537468 | 4.1:-70806909 | None:intergenic |
| GACATTTGTCCCAGAGAAGG+AGG | 0.539825 | 4.1:+70807021 | MS.gene76737:CDS |
| ATGGTGATTCAGGGTTGTGA+TGG | 0.540646 | 4.1:+70805752 | MS.gene76737:intron |
| CAAGACATTTGTCCCAGAGA+AGG | 0.543913 | 4.1:+70807018 | MS.gene76737:CDS |
| AATAGTGTGTGCTCCAGATA+GGG | 0.548473 | 4.1:-70806917 | None:intergenic |
| CCATCATGGAAAGTGCAACT+AGG | 0.563223 | 4.1:+70806766 | MS.gene76737:CDS |
| TGCAGTTAGGAGGACCATCA+TGG | 0.582902 | 4.1:+70806752 | MS.gene76737:intron |
| TGGTGATTATACTGGATCGT+TGG | 0.583357 | 4.1:+70807158 | MS.gene76737:CDS |
| GAAAGACTGAATGATGGTCT+GGG | 0.589662 | 4.1:-70806841 | None:intergenic |
| ATCGAAAATTTCGACAATCA+GGG | 0.601146 | 4.1:+70806871 | MS.gene76737:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.1:+70805875 | MS.gene76737:CDS |
| AAGACACTTACTGGGAGTCA+AGG | 0.621054 | 4.1:+70807255 | MS.gene76737:CDS |
| TGCAAGAGACTCTGTCGTTG+CGG | 0.621078 | 4.1:+70805937 | MS.gene76737:CDS |
| TTATATATGATGCAGTTAGG+AGG | 0.622538 | 4.1:+70806742 | MS.gene76737:intron |
| AGTTGAGAAAGACTGAATGA+TGG | 0.624278 | 4.1:-70806847 | None:intergenic |
| TTCAGCTAGAGGATTTGAAG+TGG | 0.627832 | 4.1:+70805838 | MS.gene76737:CDS |
| GTAGTAAAGAGCCACCCATA+CGG | 0.639551 | 4.1:-70804928 | None:intergenic |
| AGCTCTAGACTGTGTTACAC+CGG | 0.650454 | 4.1:+70807059 | MS.gene76737:CDS |
| GAAATATTAAGACACTTACT+GGG | 0.695568 | 4.1:+70807247 | MS.gene76737:CDS |
| AATGTTGCCTGAATCTGCAG+CGG | 0.699083 | 4.1:-70806818 | None:intergenic |
| GAGATGCTAACATTATTGCG+AGG | 0.707563 | 4.1:-70804796 | None:intergenic |
| TAACACAGTCTAGAGCTGCA+AGG | 0.710102 | 4.1:-70807053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGTAAAAATTAGAA+AGG | - | chr4.1:70805225-70805244 | None:intergenic | 10.0% |
| !! | GATAAAATAAAGTTAATAAA+AGG | + | chr4.1:70806067-70806086 | MS.gene76737:intron | 10.0% |
| !! | GGTAAAATATAAATAAAATT+GGG | - | chr4.1:70805125-70805144 | None:intergenic | 10.0% |
| !! | TGGTAAAATATAAATAAAAT+TGG | - | chr4.1:70805126-70805145 | None:intergenic | 10.0% |
| !! | TTGAATATATCAAAATTAAA+AGG | + | chr4.1:70806175-70806194 | MS.gene76737:intron | 10.0% |
| !! | ATATATCAAAATTAAAAGGA+AGG | + | chr4.1:70806179-70806198 | MS.gene76737:intron | 15.0% |
| !! | GATAATTAAGATTTATTTGA+TGG | + | chr4.1:70806488-70806507 | MS.gene76737:intron | 15.0% |
| !! | TGAAAATCTATAAATAACTT+TGG | - | chr4.1:70805180-70805199 | None:intergenic | 15.0% |
| !!! | AATTTTGATATATTCAAAGT+TGG | - | chr4.1:70806172-70806191 | None:intergenic | 15.0% |
| !!! | ATTATCTTGTGATATTATTT+TGG | - | chr4.1:70806474-70806493 | None:intergenic | 15.0% |
| !!! | TTATCTTGTGATATTATTTT+GGG | - | chr4.1:70806473-70806492 | None:intergenic | 15.0% |
| !! | AATATATACACATCATTAGA+AGG | - | chr4.1:70806614-70806633 | None:intergenic | 20.0% |
| !! | ATTTCGTTATGTAAAAGAAT+AGG | + | chr4.1:70806290-70806309 | MS.gene76737:intron | 20.0% |
| !! | GATATTGAATAATATATGCA+AGG | + | chr4.1:70805331-70805350 | MS.gene76737:intron | 20.0% |
| !! | TAAAGTTAATAAAAGGAAGT+TGG | + | chr4.1:70806074-70806093 | MS.gene76737:intron | 20.0% |
| !! | TTATTAAATGGTGATTATAC+TGG | + | chr4.1:70807150-70807169 | MS.gene76737:CDS | 20.0% |
| !!! | ACATTATATTTTGAACTAGT+CGG | + | chr4.1:70806016-70806035 | MS.gene76737:intron | 20.0% |
| !!! | ATCAACTCTTTATTTTTTTG+TGG | - | chr4.1:70805379-70805398 | None:intergenic | 20.0% |
| !!! | ATGATGTGTATATATTGATT+TGG | + | chr4.1:70806618-70806637 | MS.gene76737:intron | 20.0% |
| !!! | GATATTAAAGAAGTTTTTGT+AGG | - | chr4.1:70806657-70806676 | None:intergenic | 20.0% |
| !!! | GTGATTGATAATTTGAAAAT+TGG | + | chr4.1:70805431-70805450 | MS.gene76737:intron | 20.0% |
| !!! | GTGATTGATAATTTGAAAAT+TGG | - | chr4.1:70805450-70805431 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCTCATTTTGTTT+TGG | - | chr4.1:70805146-70805165 | None:intergenic | 20.0% |
| !!! | TTTATTTTTATGGTGATTCA+GGG | + | chr4.1:70805743-70805762 | MS.gene76737:intron | 20.0% |
| !!! | TTTTATTTTTATGGTGATTC+AGG | + | chr4.1:70805742-70805761 | MS.gene76737:intron | 20.0% |
| !!! | TTTTCTAACTTATCTTTACT+CGG | + | chr4.1:70806123-70806142 | MS.gene76737:intron | 20.0% |
| ! | AGGAACTGATTAAAAAGAAA+GGG | + | chr4.1:70807106-70807125 | MS.gene76737:CDS | 25.0% |
| ! | CAAATCAATCTCAAATGATA+AGG | + | chr4.1:70805309-70805328 | MS.gene76737:intron | 25.0% |
| ! | CAATTATATATGATGCAGTT+AGG | + | chr4.1:70806739-70806758 | MS.gene76737:intron | 25.0% |
| ! | GAAATATTAAGACACTTACT+GGG | + | chr4.1:70807247-70807266 | MS.gene76737:CDS | 25.0% |
| ! | TGAGAAACTAAAATAAGTAG+AGG | + | chr4.1:70805154-70805173 | MS.gene76737:intron | 25.0% |
| ! | TTTGATATATTCAAAGTTGG+TGG | - | chr4.1:70806169-70806188 | None:intergenic | 25.0% |
| !! | ATCTACCAATTTGCTTATAA+GGG | - | chr4.1:70805100-70805119 | None:intergenic | 25.0% |
| !! | CTTATCATTTGAGATTGATT+TGG | - | chr4.1:70805311-70805330 | None:intergenic | 25.0% |
| !! | TATCTACCAATTTGCTTATA+AGG | - | chr4.1:70805101-70805120 | None:intergenic | 25.0% |
| !!! | ATATTATTTTGGGTCTTGTT+AGG | - | chr4.1:70806463-70806482 | None:intergenic | 25.0% |
| !!! | TATTATTTTGGGTCTTGTTA+GGG | - | chr4.1:70806462-70806481 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTCATTGTAGATT+CGG | - | chr4.1:70806972-70806991 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTCTGAGTTAT+TGG | - | chr4.1:70806679-70806698 | None:intergenic | 25.0% |
| ACAAACCCTTATAAGCAAAT+TGG | + | chr4.1:70805092-70805111 | MS.gene76737:intron | 30.0% | |
| ATCGAAAATTTCGACAATCA+GGG | + | chr4.1:70806871-70806890 | MS.gene76737:CDS | 30.0% | |
| ATTTGATGTGTCATATTACC+AGG | + | chr4.1:70807086-70807105 | MS.gene76737:CDS | 30.0% | |
| CAGGAACTGATTAAAAAGAA+AGG | + | chr4.1:70807105-70807124 | MS.gene76737:CDS | 30.0% | |
| CCAAATTTAAATTCAGCTAG+AGG | + | chr4.1:70805827-70805846 | MS.gene76737:CDS | 30.0% | |
| CCTCTAGCTGAATTTAAATT+TGG | - | chr4.1:70805830-70805849 | None:intergenic | 30.0% | |
| GCGAAATCTATGATTAAGAT+GGG | + | chr4.1:70807225-70807244 | MS.gene76737:CDS | 30.0% | |
| GGAAATATTAAGACACTTAC+TGG | + | chr4.1:70807246-70807265 | MS.gene76737:CDS | 30.0% | |
| TAAAACAGAATTAGTCAGCA+TGG | + | chr4.1:70806045-70806064 | MS.gene76737:intron | 30.0% | |
| TATATCTATACACACACACA+TGG | - | chr4.1:70805001-70805020 | None:intergenic | 30.0% | |
| TCGGATCAGGAATTATTAAA+TGG | + | chr4.1:70807138-70807157 | MS.gene76737:CDS | 30.0% | |
| TGCGAAATCTATGATTAAGA+TGG | + | chr4.1:70807224-70807243 | MS.gene76737:CDS | 30.0% | |
| TTATATATGATGCAGTTAGG+AGG | + | chr4.1:70806742-70806761 | MS.gene76737:intron | 30.0% | |
| ! | CTTTCTTTTTAATCAGTTCC+TGG | - | chr4.1:70807107-70807126 | None:intergenic | 30.0% |
| ! | GATCGTTGGTTAGAAAATAT+AGG | + | chr4.1:70807172-70807191 | MS.gene76737:CDS | 30.0% |
| ! | TAATAGTGCTCAAAGCATTA+GGG | - | chr4.1:70804874-70804893 | None:intergenic | 30.0% |
| ! | TATGACACATCAAATTTTGC+CGG | - | chr4.1:70807081-70807100 | None:intergenic | 30.0% |
| AAAGAAAGGGCTTCTTCATT+CGG | + | chr4.1:70807119-70807138 | MS.gene76737:CDS | 35.0% | |
| AATAATATATGCAAGGTCCG+AGG | + | chr4.1:70805338-70805357 | MS.gene76737:intron | 35.0% | |
| AGTTCAAAAAGAGAACCGTA+TGG | + | chr4.1:70804913-70804932 | MS.gene76737:CDS | 35.0% | |
| AGTTGAGAAAGACTGAATGA+TGG | - | chr4.1:70806850-70806869 | None:intergenic | 35.0% | |
| CATCGAAAATTTCGACAATC+AGG | + | chr4.1:70806870-70806889 | MS.gene76737:CDS | 35.0% | |
| CCACAACAAATTATGTTCAC+TGG | + | chr4.1:70806525-70806544 | MS.gene76737:intron | 35.0% | |
| GTTCAAAAAGAGAACCGTAT+GGG | + | chr4.1:70804914-70804933 | MS.gene76737:CDS | 35.0% | |
| TCTTGTTAGGGCAATAGTTA+AGG | - | chr4.1:70806450-70806469 | None:intergenic | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.1:70805907-70805926 | MS.gene76737:CDS | 35.0% | |
| ! | CTAATAGTGCTCAAAGCATT+AGG | - | chr4.1:70804875-70804894 | None:intergenic | 35.0% |
| !! | CCAGTGAACATAATTTGTTG+TGG | - | chr4.1:70806528-70806547 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.1:70805853-70805872 | MS.gene76737:CDS | 35.0% |
| !!! | CTTTATTTTTTTGTGGTGCC+CGG | - | chr4.1:70805372-70805391 | None:intergenic | 35.0% |
| !!! | TTTATTTTTTTGTGGTGCCC+GGG | - | chr4.1:70805371-70805390 | None:intergenic | 35.0% |
| !!! | TTTTTTTCACTGTCCATCGA+AGG | - | chr4.1:70805800-70805819 | None:intergenic | 35.0% |
| AAACAATGTCCTCAGGGTAT+TGG | + | chr4.1:70806321-70806340 | MS.gene76737:intron | 40.0% | |
| AACGCTAAACAATGTCCTCA+GGG | + | chr4.1:70806315-70806334 | MS.gene76737:intron | 40.0% | |
| AATAGTGTGTGCTCCAGATA+GGG | - | chr4.1:70806920-70806939 | None:intergenic | 40.0% | |
| AGAAAGACTGAATGATGGTC+TGG | - | chr4.1:70806845-70806864 | None:intergenic | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.1:70805905-70805924 | None:intergenic | 40.0% | |
| ATTGCTTAACCAATACCCTG+AGG | - | chr4.1:70806333-70806352 | None:intergenic | 40.0% | |
| GAAAGACTGAATGATGGTCT+GGG | - | chr4.1:70806844-70806863 | None:intergenic | 40.0% | |
| GAGATGCTAACATTATTGCG+AGG | - | chr4.1:70804799-70804818 | None:intergenic | 40.0% | |
| GTGAAATTCGTTCAAACTGC+AGG | + | chr4.1:70807277-70807296 | MS.gene76737:CDS | 40.0% | |
| TCAAGACCAACAAACATGCA+TGG | - | chr4.1:70806589-70806608 | None:intergenic | 40.0% | |
| TGGTGATTATACTGGATCGT+TGG | + | chr4.1:70807158-70807177 | MS.gene76737:CDS | 40.0% | |
| TTCAGCTAGAGGATTTGAAG+TGG | + | chr4.1:70805838-70805857 | MS.gene76737:CDS | 40.0% | |
| ! | ATGGAGTGTCTCTAACTAGT+TGG | - | chr4.1:70806570-70806589 | None:intergenic | 40.0% |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.1:70805875-70805894 | MS.gene76737:CDS | 40.0% |
| AAGACACTTACTGGGAGTCA+AGG | + | chr4.1:70807255-70807274 | MS.gene76737:CDS | 45.0% | |
| AATGTTGCCTGAATCTGCAG+CGG | - | chr4.1:70806821-70806840 | None:intergenic | 45.0% | |
| ATGGTGATTCAGGGTTGTGA+TGG | + | chr4.1:70805752-70805771 | MS.gene76737:intron | 45.0% | |
| CAAAAAGAGAACCGTATGGG+TGG | + | chr4.1:70804917-70804936 | MS.gene76737:CDS | 45.0% | |
| CAAGACATTTGTCCCAGAGA+AGG | + | chr4.1:70807018-70807037 | MS.gene76737:CDS | 45.0% | |
| CAATAGTGTGTGCTCCAGAT+AGG | - | chr4.1:70806921-70806940 | None:intergenic | 45.0% | |
| CCTAGTTGCACTTTCCATGA+TGG | - | chr4.1:70806769-70806788 | None:intergenic | 45.0% | |
| GAACGCTAAACAATGTCCTC+AGG | + | chr4.1:70806314-70806333 | MS.gene76737:intron | 45.0% | |
| GACACTCCATGCATGTTTGT+TGG | + | chr4.1:70806580-70806599 | MS.gene76737:intron | 45.0% | |
| GTAGTAAAGAGCCACCCATA+CGG | - | chr4.1:70804931-70804950 | None:intergenic | 45.0% | |
| TCTAGACTCTACACCTTCGA+TGG | + | chr4.1:70805784-70805803 | MS.gene76737:CDS | 45.0% | |
| ! | CCATCATGGAAAGTGCAACT+AGG | + | chr4.1:70806766-70806785 | MS.gene76737:CDS | 45.0% |
| ! | CTATCTGGAGCACACACTAT+TGG | + | chr4.1:70806919-70806938 | MS.gene76737:CDS | 45.0% |
| ! | TAACACAGTCTAGAGCTGCA+AGG | - | chr4.1:70807056-70807075 | None:intergenic | 45.0% |
| !! | AGCTCTAGACTGTGTTACAC+CGG | + | chr4.1:70807059-70807078 | MS.gene76737:CDS | 45.0% |
| !!! | TGTTTTTATTTTTATTTTTA+TGG | + | chr4.1:70805733-70805752 | MS.gene76737:intron | 5.0% |
| AGGGCTTCTTCATTCGGATC+AGG | + | chr4.1:70807125-70807144 | MS.gene76737:CDS | 50.0% | |
| CAAGACCTAGTTGCCCTATC+TGG | + | chr4.1:70806904-70806923 | MS.gene76737:CDS | 50.0% | |
| GACATTTGTCCCAGAGAAGG+AGG | + | chr4.1:70807021-70807040 | MS.gene76737:CDS | 50.0% | |
| TGCAAGAGACTCTGTCGTTG+CGG | + | chr4.1:70805937-70805956 | MS.gene76737:CDS | 50.0% | |
| TGCAGTTAGGAGGACCATCA+TGG | + | chr4.1:70806752-70806771 | MS.gene76737:intron | 50.0% | |
| TTGGAGTCTCCTCCTTCTCT+GGG | - | chr4.1:70807033-70807052 | None:intergenic | 50.0% | |
| ! | ACAGTCTAGAGCTGCAAGGT+TGG | - | chr4.1:70807052-70807071 | None:intergenic | 50.0% |
| AAGGTCCGAGGTTCGAATCC+CGG | + | chr4.1:70805350-70805369 | MS.gene76737:intron | 55.0% | |
| GTGCTCCAGATAGGGCAACT+AGG | - | chr4.1:70806912-70806931 | None:intergenic | 55.0% | |
| GTTGGAGTCTCCTCCTTCTC+TGG | - | chr4.1:70807034-70807053 | None:intergenic | 55.0% | |
| AGGTCCGAGGTTCGAATCCC+GGG | + | chr4.1:70805351-70805370 | MS.gene76737:intron | 60.0% | |
| ! | AGTCGTGCCGCTGCAGATTC+AGG | + | chr4.1:70806811-70806830 | MS.gene76737:CDS | 60.0% |
| GGTGCCCGGGATTCGAACCT+CGG | - | chr4.1:70805358-70805377 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 70804788 | 70807311 | 70804788 | ID=MS.gene76737 |
| chr4.1 | mRNA | 70804788 | 70807311 | 70804788 | ID=MS.gene76737.t1;Parent=MS.gene76737 |
| chr4.1 | exon | 70804788 | 70804979 | 70804788 | ID=MS.gene76737.t1.exon1;Parent=MS.gene76737.t1 |
| chr4.1 | CDS | 70804788 | 70804979 | 70804788 | ID=cds.MS.gene76737.t1;Parent=MS.gene76737.t1 |
| chr4.1 | exon | 70805764 | 70805958 | 70805764 | ID=MS.gene76737.t1.exon2;Parent=MS.gene76737.t1 |
| chr4.1 | CDS | 70805764 | 70805958 | 70805764 | ID=cds.MS.gene76737.t1;Parent=MS.gene76737.t1 |
| chr4.1 | exon | 70806757 | 70807311 | 70806757 | ID=MS.gene76737.t1.exon3;Parent=MS.gene76737.t1 |
| chr4.1 | CDS | 70806757 | 70807311 | 70806757 | ID=cds.MS.gene76737.t1;Parent=MS.gene76737.t1 |
| Gene Sequence |
| Protein sequence |
