Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76738.t1 | RHN59427.1 | 91.6 | 321 | 27 | 0 | 1 | 321 | 33 | 353 | 9.50E-166 | 592.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76738.t1 | Q9FLC0 | 58.0 | 326 | 130 | 4 | 1 | 321 | 1 | 324 | 6.8e-96 | 352.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76738.t1 | A0A072UHR9 | 91.6 | 321 | 27 | 0 | 1 | 321 | 1 | 321 | 6.8e-166 | 592.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene76738 | 0.819072 | 1.41E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene76738 | 0.848159 | 7.32E-60 | -1.69E-46 |
| MS.gene049634 | MS.gene76738 | 0.809257 | 2.07E-50 | -1.69E-46 |
| MS.gene050095 | MS.gene76738 | 0.831005 | 2.13E-55 | -1.69E-46 |
| MS.gene050096 | MS.gene76738 | 0.85749 | 1.58E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene76738 | 0.82741 | 1.59E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene76738 | 0.815007 | 1.15E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene76738 | -0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene76738 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene76738 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene76738 | -0.801063 | 1.07E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene76738 | 0.847668 | 1.00E-59 | -1.69E-46 |
| MS.gene05240 | MS.gene76738 | 0.874248 | 7.83E-68 | -1.69E-46 |
| MS.gene05244 | MS.gene76738 | 0.82594 | 3.56E-54 | -1.69E-46 |
| MS.gene052606 | MS.gene76738 | 0.804694 | 1.91E-49 | -1.69E-46 |
| MS.gene052705 | MS.gene76738 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene053030 | MS.gene76738 | 0.834714 | 2.56E-56 | -1.69E-46 |
| MS.gene053031 | MS.gene76738 | 0.866542 | 2.64E-65 | -1.69E-46 |
| MS.gene053033 | MS.gene76738 | 0.850788 | 1.35E-60 | -1.69E-46 |
| MS.gene053403 | MS.gene76738 | 0.81079 | 9.67E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene76738 | 0.843901 | 1.05E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene76738 | 0.818023 | 2.43E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene76738 | -0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene054146 | MS.gene76738 | 0.853959 | 1.69E-61 | -1.69E-46 |
| MS.gene054181 | MS.gene76738 | 0.828035 | 1.12E-54 | -1.69E-46 |
| MS.gene054277 | MS.gene76738 | 0.801163 | 1.03E-48 | -1.69E-46 |
| MS.gene054290 | MS.gene76738 | 0.820075 | 8.31E-53 | -1.69E-46 |
| MS.gene054421 | MS.gene76738 | 0.825185 | 5.38E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene76738 | 0.839211 | 1.81E-57 | -1.69E-46 |
| MS.gene05483 | MS.gene76738 | 0.844195 | 8.78E-59 | -1.69E-46 |
| MS.gene055124 | MS.gene76738 | 0.830706 | 2.53E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene76738 | 0.826931 | 2.07E-54 | -1.69E-46 |
| MS.gene055240 | MS.gene76738 | 0.839975 | 1.15E-57 | -1.69E-46 |
| MS.gene055601 | MS.gene76738 | 0.803745 | 3.01E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene76738 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene056218 | MS.gene76738 | 0.830625 | 2.64E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene76738 | 0.810988 | 8.76E-51 | -1.69E-46 |
| MS.gene056359 | MS.gene76738 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene76738 | 0.830689 | 2.55E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene76738 | 0.830679 | 2.56E-55 | -1.69E-46 |
| MS.gene056748 | MS.gene76738 | 0.818914 | 1.53E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene76738 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene76738 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene057544 | MS.gene76738 | 0.82139 | 4.14E-53 | -1.69E-46 |
| MS.gene057547 | MS.gene76738 | 0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene057550 | MS.gene76738 | 0.815089 | 1.11E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene76738 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene76738 | 0.803726 | 3.04E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene76738 | -0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene76738 | 0.839241 | 1.78E-57 | -1.69E-46 |
| MS.gene059265 | MS.gene76738 | 0.807781 | 4.27E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene76738 | 0.82342 | 1.40E-53 | -1.69E-46 |
| MS.gene059944 | MS.gene76738 | 0.805689 | 1.18E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene76738 | 0.836477 | 9.15E-57 | -1.69E-46 |
| MS.gene059955 | MS.gene76738 | 0.849646 | 2.83E-60 | -1.69E-46 |
| MS.gene060087 | MS.gene76738 | 0.821454 | 4.00E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene76738 | 0.807904 | 4.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76738.t1 | MTR_4g029170 | 90.966 | 321 | 29 | 0 | 1 | 321 | 1 | 321 | 0.0 | 612 |
| MS.gene76738.t1 | MTR_4g029180 | 91.589 | 321 | 27 | 0 | 1 | 321 | 1 | 321 | 0.0 | 585 |
| MS.gene76738.t1 | MTR_5g074710 | 62.145 | 317 | 114 | 4 | 9 | 321 | 7 | 321 | 3.79e-139 | 397 |
| MS.gene76738.t1 | MTR_5g074740 | 60.615 | 325 | 120 | 5 | 1 | 321 | 1 | 321 | 2.10e-136 | 390 |
| MS.gene76738.t1 | MTR_5g074760 | 59.692 | 325 | 123 | 5 | 1 | 321 | 1 | 321 | 2.30e-135 | 387 |
| MS.gene76738.t1 | MTR_5g074860 | 60.000 | 315 | 117 | 5 | 11 | 318 | 10 | 322 | 6.53e-132 | 378 |
| MS.gene76738.t1 | MTR_5g074970 | 59.443 | 323 | 127 | 2 | 2 | 321 | 5 | 326 | 8.43e-131 | 375 |
| MS.gene76738.t1 | MTR_3g466200 | 59.236 | 314 | 124 | 3 | 11 | 321 | 8 | 320 | 7.98e-127 | 365 |
| MS.gene76738.t1 | MTR_3g072190 | 57.407 | 324 | 129 | 5 | 1 | 321 | 1 | 318 | 1.31e-122 | 354 |
| MS.gene76738.t1 | MTR_3g094650 | 55.414 | 314 | 136 | 3 | 10 | 321 | 11 | 322 | 8.07e-122 | 353 |
| MS.gene76738.t1 | MTR_3g467600 | 55.828 | 326 | 137 | 5 | 1 | 321 | 1 | 324 | 1.40e-121 | 352 |
| MS.gene76738.t1 | MTR_5g083860 | 55.591 | 313 | 134 | 4 | 11 | 321 | 16 | 325 | 6.17e-121 | 350 |
| MS.gene76738.t1 | MTR_4g029200 | 56.169 | 308 | 133 | 2 | 14 | 321 | 33 | 338 | 9.58e-121 | 350 |
| MS.gene76738.t1 | MTR_7g072480 | 57.097 | 310 | 131 | 2 | 12 | 321 | 9 | 316 | 3.18e-119 | 346 |
| MS.gene76738.t1 | MTR_7g072510 | 55.932 | 295 | 128 | 2 | 27 | 321 | 20 | 312 | 8.17e-118 | 342 |
| MS.gene76738.t1 | MTR_4g083710 | 53.681 | 326 | 144 | 5 | 1 | 321 | 1 | 324 | 2.19e-117 | 342 |
| MS.gene76738.t1 | MTR_2g084020 | 54.777 | 314 | 139 | 3 | 9 | 321 | 7 | 318 | 2.89e-117 | 341 |
| MS.gene76738.t1 | MTR_3g094630 | 58.013 | 312 | 126 | 4 | 13 | 321 | 13 | 322 | 3.10e-116 | 338 |
| MS.gene76738.t1 | MTR_3g466180 | 54.829 | 321 | 143 | 2 | 1 | 321 | 5 | 323 | 2.09e-115 | 336 |
| MS.gene76738.t1 | MTR_2g084000 | 54.603 | 315 | 139 | 4 | 9 | 321 | 7 | 319 | 2.77e-115 | 336 |
| MS.gene76738.t1 | MTR_2g084080 | 52.215 | 316 | 149 | 2 | 6 | 321 | 4 | 317 | 9.17e-115 | 335 |
| MS.gene76738.t1 | MTR_3g094670 | 55.247 | 324 | 140 | 4 | 1 | 321 | 1 | 322 | 2.71e-114 | 333 |
| MS.gene76738.t1 | MTR_2g084110 | 52.532 | 316 | 148 | 2 | 6 | 321 | 4 | 317 | 3.29e-114 | 333 |
| MS.gene76738.t1 | MTR_2g084010 | 53.503 | 314 | 143 | 3 | 9 | 321 | 7 | 318 | 1.18e-113 | 332 |
| MS.gene76738.t1 | MTR_2g084090 | 51.420 | 317 | 151 | 3 | 6 | 321 | 4 | 318 | 4.26e-111 | 325 |
| MS.gene76738.t1 | MTR_4g074995 | 53.035 | 313 | 127 | 5 | 14 | 321 | 11 | 308 | 8.04e-111 | 324 |
| MS.gene76738.t1 | MTR_4g029190 | 54.949 | 293 | 128 | 3 | 31 | 321 | 50 | 340 | 2.72e-110 | 324 |
| MS.gene76738.t1 | MTR_5g021060 | 55.116 | 303 | 126 | 4 | 27 | 321 | 30 | 330 | 7.23e-110 | 323 |
| MS.gene76738.t1 | MTR_1g115900 | 49.845 | 323 | 153 | 5 | 2 | 321 | 5 | 321 | 1.14e-107 | 317 |
| MS.gene76738.t1 | MTR_8g076820 | 54.098 | 305 | 130 | 4 | 25 | 321 | 28 | 330 | 1.52e-107 | 317 |
| MS.gene76738.t1 | MTR_7g026990 | 52.077 | 313 | 147 | 3 | 9 | 321 | 13 | 322 | 4.57e-107 | 315 |
| MS.gene76738.t1 | MTR_4g074990 | 51.290 | 310 | 130 | 5 | 16 | 321 | 13 | 305 | 1.56e-103 | 305 |
| MS.gene76738.t1 | MTR_5g074860 | 50.949 | 316 | 107 | 6 | 10 | 318 | 9 | 283 | 2.27e-102 | 302 |
| MS.gene76738.t1 | MTR_3g072190 | 60.317 | 252 | 98 | 2 | 70 | 321 | 2 | 251 | 9.66e-101 | 296 |
| MS.gene76738.t1 | MTR_1g022970 | 50.820 | 305 | 139 | 4 | 26 | 321 | 45 | 347 | 1.09e-99 | 297 |
| MS.gene76738.t1 | MTR_4g125940 | 49.845 | 323 | 147 | 5 | 10 | 321 | 11 | 329 | 2.68e-98 | 293 |
| MS.gene76738.t1 | MTR_4g122640 | 49.186 | 307 | 148 | 4 | 21 | 321 | 32 | 336 | 1.74e-97 | 291 |
| MS.gene76738.t1 | MTR_2g029815 | 47.531 | 324 | 159 | 4 | 7 | 321 | 9 | 330 | 3.16e-97 | 291 |
| MS.gene76738.t1 | MTR_7g093370 | 46.224 | 331 | 164 | 6 | 1 | 321 | 45 | 371 | 4.18e-97 | 291 |
| MS.gene76738.t1 | MTR_5g017850 | 46.417 | 321 | 161 | 4 | 9 | 321 | 9 | 326 | 9.83e-97 | 289 |
| MS.gene76738.t1 | MTR_1g054205 | 47.059 | 323 | 155 | 6 | 9 | 321 | 10 | 326 | 2.15e-96 | 288 |
| MS.gene76738.t1 | MTR_2g028980 | 49.057 | 318 | 151 | 4 | 13 | 321 | 15 | 330 | 2.20e-96 | 289 |
| MS.gene76738.t1 | MTR_2g029800 | 47.799 | 318 | 155 | 4 | 13 | 321 | 15 | 330 | 2.60e-96 | 289 |
| MS.gene76738.t1 | MTR_2g029820 | 47.319 | 317 | 156 | 4 | 14 | 321 | 16 | 330 | 3.96e-95 | 286 |
| MS.gene76738.t1 | MTR_2g040000 | 48.860 | 307 | 141 | 5 | 27 | 321 | 29 | 331 | 4.97e-95 | 285 |
| MS.gene76738.t1 | MTR_5g014100 | 49.838 | 309 | 138 | 5 | 27 | 321 | 26 | 331 | 1.10e-94 | 284 |
| MS.gene76738.t1 | MTR_2g029850 | 48.113 | 318 | 154 | 4 | 13 | 321 | 15 | 330 | 2.52e-94 | 284 |
| MS.gene76738.t1 | MTR_2g029750 | 46.226 | 318 | 160 | 4 | 13 | 321 | 15 | 330 | 2.68e-94 | 284 |
| MS.gene76738.t1 | MTR_2g029860 | 45.181 | 332 | 169 | 5 | 1 | 321 | 1 | 330 | 1.26e-93 | 282 |
| MS.gene76738.t1 | MTR_4g074980 | 48.065 | 310 | 133 | 8 | 14 | 321 | 11 | 294 | 1.84e-93 | 280 |
| MS.gene76738.t1 | MTR_5g017860 | 45.171 | 321 | 165 | 4 | 9 | 321 | 9 | 326 | 2.20e-93 | 280 |
| MS.gene76738.t1 | MTR_2g029560 | 46.178 | 314 | 158 | 4 | 17 | 321 | 14 | 325 | 1.70e-92 | 279 |
| MS.gene76738.t1 | MTR_2g029830 | 48.355 | 304 | 146 | 4 | 27 | 321 | 28 | 329 | 6.25e-92 | 278 |
| MS.gene76738.t1 | MTR_2g029910 | 47.335 | 319 | 156 | 5 | 13 | 321 | 16 | 332 | 7.54e-92 | 278 |
| MS.gene76738.t1 | MTR_2g029740 | 45.912 | 318 | 161 | 4 | 13 | 321 | 15 | 330 | 1.14e-91 | 277 |
| MS.gene76738.t1 | MTR_5g049280 | 47.557 | 307 | 147 | 6 | 27 | 321 | 33 | 337 | 1.47e-90 | 274 |
| MS.gene76738.t1 | MTR_4g030890 | 47.573 | 309 | 150 | 5 | 20 | 321 | 93 | 396 | 1.05e-88 | 271 |
| MS.gene76738.t1 | MTR_2g029730 | 45.912 | 318 | 161 | 4 | 13 | 321 | 11 | 326 | 3.51e-88 | 268 |
| MS.gene76738.t1 | MTR_4g125940 | 52.347 | 277 | 117 | 5 | 56 | 321 | 2 | 274 | 8.64e-88 | 265 |
| MS.gene76738.t1 | MTR_4g074980 | 54.286 | 245 | 105 | 5 | 14 | 253 | 11 | 253 | 1.94e-86 | 260 |
| MS.gene76738.t1 | MTR_4g031140 | 45.603 | 307 | 155 | 5 | 22 | 321 | 23 | 324 | 2.17e-86 | 263 |
| MS.gene76738.t1 | MTR_2g088770 | 42.679 | 321 | 171 | 7 | 10 | 321 | 9 | 325 | 3.10e-84 | 257 |
| MS.gene76738.t1 | MTR_8g075100 | 43.648 | 307 | 158 | 7 | 22 | 321 | 21 | 319 | 9.29e-81 | 248 |
| MS.gene76738.t1 | MTR_1g101830 | 41.159 | 328 | 177 | 7 | 1 | 321 | 4 | 322 | 3.18e-80 | 247 |
| MS.gene76738.t1 | MTR_5g074700 | 55.702 | 228 | 85 | 5 | 96 | 321 | 1 | 214 | 6.25e-79 | 239 |
| MS.gene76738.t1 | MTR_5g022870 | 42.006 | 319 | 169 | 8 | 10 | 321 | 7 | 316 | 2.11e-78 | 242 |
| MS.gene76738.t1 | MTR_1g086320 | 42.296 | 331 | 176 | 6 | 4 | 321 | 5 | 333 | 2.32e-78 | 242 |
| MS.gene76738.t1 | MTR_4g046713 | 39.210 | 329 | 187 | 6 | 1 | 321 | 3 | 326 | 1.62e-77 | 240 |
| MS.gene76738.t1 | MTR_2g008710 | 41.284 | 327 | 173 | 7 | 7 | 321 | 6 | 325 | 2.12e-77 | 239 |
| MS.gene76738.t1 | MTR_1g025980 | 42.222 | 315 | 169 | 7 | 9 | 316 | 7 | 315 | 2.83e-77 | 239 |
| MS.gene76738.t1 | MTR_0155s0040 | 40.940 | 298 | 168 | 6 | 25 | 321 | 25 | 315 | 1.14e-76 | 237 |
| MS.gene76738.t1 | MTR_1g086490 | 42.183 | 339 | 172 | 7 | 4 | 321 | 5 | 340 | 2.07e-76 | 238 |
| MS.gene76738.t1 | MTR_1g009750 | 41.088 | 331 | 182 | 7 | 1 | 321 | 1 | 328 | 3.27e-75 | 234 |
| MS.gene76738.t1 | MTR_3g092990 | 39.873 | 316 | 180 | 4 | 14 | 321 | 13 | 326 | 4.53e-75 | 234 |
| MS.gene76738.t1 | MTR_2g029830 | 48.837 | 258 | 121 | 4 | 73 | 321 | 6 | 261 | 6.79e-75 | 232 |
| MS.gene76738.t1 | MTR_7g086870 | 40.878 | 296 | 168 | 5 | 27 | 321 | 22 | 311 | 3.47e-74 | 231 |
| MS.gene76738.t1 | MTR_7g029030 | 39.937 | 318 | 183 | 6 | 9 | 321 | 6 | 320 | 4.06e-74 | 231 |
| MS.gene76738.t1 | MTR_1g077000 | 41.216 | 296 | 166 | 6 | 27 | 321 | 39 | 327 | 1.08e-73 | 230 |
| MS.gene76738.t1 | MTR_4g114210 | 40.625 | 320 | 171 | 6 | 14 | 321 | 8 | 320 | 3.00e-71 | 224 |
| MS.gene76738.t1 | MTR_1g038680 | 41.060 | 302 | 165 | 6 | 31 | 321 | 33 | 332 | 4.88e-69 | 218 |
| MS.gene76738.t1 | MTR_5g016010 | 37.267 | 322 | 183 | 6 | 6 | 317 | 13 | 325 | 7.78e-69 | 218 |
| MS.gene76738.t1 | MTR_4g087965 | 41.265 | 332 | 172 | 9 | 7 | 317 | 13 | 342 | 8.22e-69 | 218 |
| MS.gene76738.t1 | MTR_4g095450 | 38.820 | 322 | 190 | 5 | 1 | 317 | 1 | 320 | 8.62e-69 | 218 |
| MS.gene76738.t1 | MTR_7g107520 | 37.888 | 322 | 187 | 6 | 7 | 321 | 5 | 320 | 1.75e-68 | 216 |
| MS.gene76738.t1 | MTR_4g133800 | 37.647 | 340 | 177 | 9 | 6 | 321 | 5 | 333 | 2.14e-68 | 217 |
| MS.gene76738.t1 | MTR_6g027440 | 36.478 | 318 | 186 | 7 | 9 | 321 | 8 | 314 | 2.62e-68 | 216 |
| MS.gene76738.t1 | MTR_1g090760 | 38.906 | 329 | 186 | 7 | 6 | 321 | 4 | 330 | 5.31e-68 | 216 |
| MS.gene76738.t1 | MTR_2g437770 | 42.574 | 303 | 155 | 8 | 27 | 321 | 50 | 341 | 7.02e-68 | 216 |
| MS.gene76738.t1 | MTR_2g008160 | 40.584 | 308 | 166 | 6 | 25 | 321 | 22 | 323 | 2.12e-67 | 214 |
| MS.gene76738.t1 | MTR_7g086820 | 37.294 | 303 | 178 | 5 | 24 | 321 | 17 | 312 | 2.92e-67 | 213 |
| MS.gene76738.t1 | MTR_4g127670 | 40.789 | 304 | 167 | 6 | 27 | 321 | 24 | 323 | 7.42e-67 | 213 |
| MS.gene76738.t1 | MTR_6g043280 | 36.858 | 331 | 194 | 7 | 1 | 321 | 7 | 332 | 1.22e-66 | 212 |
| MS.gene76738.t1 | MTR_1g009750 | 38.182 | 330 | 176 | 8 | 1 | 321 | 1 | 311 | 1.02e-64 | 207 |
| MS.gene76738.t1 | MTR_3g072210 | 56.452 | 186 | 78 | 3 | 138 | 321 | 54 | 238 | 1.71e-64 | 204 |
| MS.gene76738.t1 | MTR_0286s0010 | 36.533 | 323 | 192 | 7 | 7 | 321 | 17 | 334 | 2.01e-63 | 204 |
| MS.gene76738.t1 | MTR_6g008075 | 36.533 | 323 | 192 | 7 | 7 | 321 | 17 | 334 | 2.01e-63 | 204 |
| MS.gene76738.t1 | MTR_3g092990 | 37.658 | 316 | 176 | 5 | 14 | 321 | 13 | 315 | 2.36e-63 | 203 |
| MS.gene76738.t1 | MTR_2g099175 | 38.245 | 319 | 178 | 6 | 15 | 321 | 24 | 335 | 6.17e-63 | 203 |
| MS.gene76738.t1 | MTR_8g062780 | 35.802 | 324 | 197 | 5 | 7 | 321 | 3 | 324 | 6.86e-63 | 202 |
| MS.gene76738.t1 | MTR_6g043240 | 36.076 | 316 | 195 | 6 | 7 | 321 | 22 | 331 | 1.96e-61 | 199 |
| MS.gene76738.t1 | MTR_2g077990 | 38.855 | 332 | 161 | 8 | 25 | 317 | 74 | 402 | 9.82e-61 | 199 |
| MS.gene76738.t1 | MTR_6g043460 | 37.037 | 297 | 181 | 5 | 27 | 321 | 36 | 328 | 4.21e-60 | 196 |
| MS.gene76738.t1 | MTR_2g078610 | 38.253 | 332 | 163 | 8 | 25 | 317 | 74 | 402 | 4.33e-60 | 197 |
| MS.gene76738.t1 | MTR_2g067440 | 36.111 | 360 | 182 | 9 | 2 | 317 | 28 | 383 | 5.33e-60 | 197 |
| MS.gene76738.t1 | MTR_2g008730 | 37.615 | 327 | 161 | 7 | 7 | 321 | 6 | 301 | 8.89e-59 | 191 |
| MS.gene76738.t1 | MTR_4g132490 | 35.099 | 302 | 186 | 5 | 27 | 321 | 29 | 327 | 3.13e-58 | 190 |
| MS.gene76738.t1 | MTR_3g105790 | 35.294 | 323 | 194 | 4 | 8 | 321 | 6 | 322 | 2.87e-54 | 180 |
| MS.gene76738.t1 | MTR_2g078280 | 37.578 | 322 | 159 | 8 | 25 | 307 | 74 | 392 | 3.15e-54 | 182 |
| MS.gene76738.t1 | MTR_2g008160 | 36.755 | 302 | 151 | 6 | 25 | 321 | 22 | 288 | 1.62e-52 | 174 |
| MS.gene76738.t1 | MTR_4g132110 | 35.000 | 300 | 187 | 5 | 27 | 321 | 32 | 328 | 1.97e-52 | 176 |
| MS.gene76738.t1 | MTR_1g066710 | 35.762 | 302 | 186 | 5 | 25 | 321 | 25 | 323 | 9.75e-52 | 174 |
| MS.gene76738.t1 | MTR_7g072490 | 43.388 | 242 | 81 | 4 | 73 | 314 | 2 | 187 | 1.74e-51 | 169 |
| MS.gene76738.t1 | MTR_1g066380 | 34.768 | 302 | 189 | 5 | 25 | 321 | 25 | 323 | 3.78e-51 | 172 |
| MS.gene76738.t1 | MTR_1g066640 | 35.762 | 302 | 186 | 5 | 25 | 321 | 25 | 323 | 7.25e-51 | 171 |
| MS.gene76738.t1 | MTR_5g033470 | 32.573 | 307 | 193 | 6 | 27 | 321 | 73 | 377 | 2.11e-50 | 171 |
| MS.gene76738.t1 | MTR_4g132110 | 34.426 | 305 | 187 | 6 | 27 | 321 | 32 | 333 | 3.53e-50 | 170 |
| MS.gene76738.t1 | MTR_1g066680 | 34.768 | 302 | 188 | 6 | 25 | 321 | 25 | 322 | 8.91e-49 | 166 |
| MS.gene76738.t1 | MTR_2g067450 | 36.928 | 306 | 172 | 10 | 25 | 317 | 9 | 306 | 1.49e-47 | 162 |
| MS.gene76738.t1 | MTR_0147s0010 | 31.447 | 318 | 175 | 7 | 27 | 317 | 77 | 378 | 1.92e-45 | 159 |
| MS.gene76738.t1 | MTR_2g008160 | 46.591 | 176 | 88 | 4 | 25 | 200 | 22 | 191 | 3.42e-44 | 150 |
| MS.gene76738.t1 | MTR_2g029880 | 44.271 | 192 | 85 | 5 | 140 | 321 | 9 | 188 | 2.02e-41 | 143 |
| MS.gene76738.t1 | MTR_3g072260 | 58.015 | 131 | 50 | 2 | 10 | 136 | 5 | 134 | 3.87e-41 | 140 |
| MS.gene76738.t1 | MTR_1g066380 | 34.375 | 256 | 160 | 5 | 71 | 321 | 3 | 255 | 1.21e-39 | 140 |
| MS.gene76738.t1 | MTR_3g105790 | 36.515 | 241 | 142 | 3 | 90 | 321 | 8 | 246 | 2.95e-37 | 134 |
| MS.gene76738.t1 | MTR_3g086710 | 93.750 | 64 | 4 | 0 | 9 | 72 | 1 | 64 | 6.60e-36 | 125 |
| MS.gene76738.t1 | MTR_2g078560 | 33.632 | 223 | 109 | 5 | 133 | 317 | 95 | 316 | 3.36e-28 | 111 |
| MS.gene76738.t1 | MTR_2g077980 | 33.212 | 274 | 134 | 9 | 89 | 317 | 11 | 280 | 5.82e-27 | 107 |
| MS.gene76738.t1 | MTR_3g462850 | 43.262 | 141 | 68 | 4 | 193 | 321 | 9 | 149 | 2.64e-26 | 102 |
| MS.gene76738.t1 | MTR_5g074770 | 49.451 | 91 | 43 | 2 | 230 | 318 | 17 | 106 | 9.97e-23 | 91.3 |
| MS.gene76738.t1 | MTR_5g058120 | 34.416 | 154 | 97 | 2 | 164 | 317 | 6 | 155 | 2.61e-21 | 91.7 |
| MS.gene76738.t1 | MTR_7g086790 | 39.344 | 122 | 68 | 3 | 74 | 195 | 17 | 132 | 8.78e-20 | 85.9 |
| MS.gene76738.t1 | MTR_1g089005 | 42.500 | 120 | 61 | 3 | 27 | 140 | 15 | 132 | 3.60e-19 | 83.2 |
| MS.gene76738.t1 | MTR_4g031040 | 35.714 | 168 | 69 | 4 | 86 | 253 | 1 | 129 | 5.86e-18 | 79.3 |
| MS.gene76738.t1 | MTR_4g114220 | 50.602 | 83 | 30 | 3 | 53 | 135 | 29 | 100 | 4.98e-17 | 77.0 |
| MS.gene76738.t1 | MTR_6g048160 | 56.338 | 71 | 26 | 3 | 66 | 136 | 22 | 87 | 8.19e-17 | 74.7 |
| MS.gene76738.t1 | MTR_2g029930 | 37.037 | 108 | 43 | 2 | 9 | 105 | 1 | 94 | 1.62e-15 | 71.6 |
| MS.gene76738.t1 | MTR_3g107060 | 26.820 | 261 | 120 | 9 | 59 | 302 | 106 | 312 | 8.23e-14 | 71.2 |
| MS.gene76738.t1 | MTR_1g098320 | 38.462 | 78 | 48 | 0 | 244 | 321 | 47 | 124 | 4.76e-13 | 65.9 |
| MS.gene76738.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 27 | 94 | 77 | 144 | 5.15e-12 | 63.2 |
| MS.gene76738.t1 | MTR_7g086810 | 28.689 | 122 | 60 | 2 | 24 | 145 | 3 | 97 | 2.80e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76738.t1 | AT5G05340 | 61.953 | 297 | 109 | 3 | 27 | 321 | 30 | 324 | 2.06e-127 | 367 |
| MS.gene76738.t1 | AT1G14550 | 53.292 | 319 | 144 | 4 | 7 | 321 | 4 | 321 | 1.63e-114 | 334 |
| MS.gene76738.t1 | AT5G58400 | 52.548 | 314 | 146 | 2 | 10 | 321 | 13 | 325 | 2.66e-112 | 328 |
| MS.gene76738.t1 | AT5G58390 | 55.161 | 310 | 136 | 2 | 14 | 321 | 8 | 316 | 1.49e-110 | 324 |
| MS.gene76738.t1 | AT4G36430 | 53.465 | 303 | 131 | 4 | 27 | 321 | 30 | 330 | 1.32e-108 | 319 |
| MS.gene76738.t1 | AT2G18150 | 53.135 | 303 | 132 | 4 | 27 | 321 | 36 | 336 | 5.38e-108 | 318 |
| MS.gene76738.t1 | AT1G14540 | 50.473 | 317 | 153 | 4 | 7 | 321 | 1 | 315 | 7.45e-107 | 314 |
| MS.gene76738.t1 | AT2G18140 | 53.135 | 303 | 132 | 4 | 27 | 321 | 35 | 335 | 1.34e-106 | 315 |
| MS.gene76738.t1 | AT1G44970 | 51.792 | 307 | 137 | 4 | 24 | 321 | 42 | 346 | 6.01e-106 | 313 |
| MS.gene76738.t1 | AT5G06720 | 50.158 | 317 | 147 | 4 | 14 | 321 | 19 | 333 | 1.22e-105 | 312 |
| MS.gene76738.t1 | AT3G50990 | 50.323 | 310 | 144 | 4 | 20 | 321 | 34 | 341 | 2.10e-103 | 306 |
| MS.gene76738.t1 | AT5G66390 | 49.216 | 319 | 152 | 4 | 11 | 321 | 17 | 333 | 2.26e-102 | 304 |
| MS.gene76738.t1 | AT3G32980 | 48.693 | 306 | 144 | 5 | 27 | 321 | 31 | 334 | 8.79e-97 | 290 |
| MS.gene76738.t1 | AT5G06730 | 45.706 | 326 | 165 | 5 | 5 | 321 | 12 | 334 | 1.85e-96 | 290 |
| MS.gene76738.t1 | AT3G49110 | 47.950 | 317 | 152 | 5 | 16 | 321 | 22 | 336 | 3.30e-96 | 289 |
| MS.gene76738.t1 | AT3G49120 | 47.604 | 313 | 151 | 5 | 20 | 321 | 25 | 335 | 3.04e-95 | 286 |
| MS.gene76738.t1 | AT4G08770 | 47.419 | 310 | 150 | 5 | 23 | 321 | 20 | 327 | 1.24e-93 | 282 |
| MS.gene76738.t1 | AT4G08780 | 46.326 | 313 | 155 | 5 | 20 | 321 | 17 | 327 | 6.92e-93 | 280 |
| MS.gene76738.t1 | AT2G35380 | 46.828 | 331 | 155 | 6 | 9 | 321 | 8 | 335 | 2.75e-91 | 275 |
| MS.gene76738.t1 | AT2G38380 | 46.130 | 323 | 157 | 7 | 13 | 321 | 14 | 333 | 1.02e-90 | 275 |
| MS.gene76738.t1 | AT1G68850 | 46.104 | 308 | 151 | 6 | 27 | 321 | 30 | 335 | 1.74e-90 | 273 |
| MS.gene76738.t1 | AT1G49570 | 47.855 | 303 | 146 | 5 | 25 | 317 | 46 | 346 | 2.61e-90 | 273 |
| MS.gene76738.t1 | AT2G38390 | 45.513 | 312 | 158 | 5 | 20 | 321 | 24 | 333 | 9.32e-90 | 272 |
| MS.gene76738.t1 | AT4G16270 | 47.987 | 298 | 143 | 5 | 32 | 321 | 55 | 348 | 1.44e-89 | 271 |
| MS.gene76738.t1 | AT5G19890 | 46.547 | 333 | 153 | 9 | 1 | 321 | 8 | 327 | 1.09e-88 | 268 |
| MS.gene76738.t1 | AT2G22420 | 44.136 | 324 | 167 | 6 | 7 | 321 | 1 | 319 | 4.13e-86 | 262 |
| MS.gene76738.t1 | AT5G19880 | 44.951 | 307 | 155 | 5 | 27 | 321 | 25 | 329 | 1.74e-83 | 255 |
| MS.gene76738.t1 | AT5G51890 | 42.901 | 324 | 166 | 9 | 7 | 321 | 9 | 322 | 1.30e-80 | 248 |
| MS.gene76738.t1 | AT1G71695 | 43.624 | 298 | 163 | 4 | 27 | 321 | 44 | 339 | 2.29e-80 | 248 |
| MS.gene76738.t1 | AT3G01190 | 42.444 | 311 | 164 | 7 | 19 | 321 | 18 | 321 | 2.06e-79 | 244 |
| MS.gene76738.t1 | AT5G42180 | 42.308 | 312 | 166 | 6 | 14 | 318 | 10 | 314 | 3.77e-79 | 244 |
| MS.gene76738.t1 | AT3G03670 | 40.252 | 318 | 174 | 6 | 14 | 321 | 10 | 321 | 5.13e-76 | 236 |
| MS.gene76738.t1 | AT5G15180 | 40.867 | 323 | 176 | 8 | 9 | 321 | 12 | 329 | 7.93e-76 | 236 |
| MS.gene76738.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 7 | 313 | 1.29e-75 | 234 |
| MS.gene76738.t1 | AT5G64120 | 41.751 | 297 | 160 | 5 | 31 | 321 | 39 | 328 | 1.93e-75 | 235 |
| MS.gene76738.t1 | AT3G21770 | 40.764 | 314 | 173 | 7 | 16 | 320 | 18 | 327 | 3.81e-75 | 234 |
| MS.gene76738.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 60 | 366 | 1.31e-74 | 234 |
| MS.gene76738.t1 | AT1G05240 | 41.967 | 305 | 162 | 7 | 27 | 321 | 26 | 325 | 1.01e-73 | 230 |
| MS.gene76738.t1 | AT1G05250 | 41.967 | 305 | 162 | 7 | 27 | 321 | 26 | 325 | 1.01e-73 | 230 |
| MS.gene76738.t1 | AT1G05260 | 40.317 | 315 | 175 | 7 | 16 | 321 | 15 | 325 | 2.17e-73 | 229 |
| MS.gene76738.t1 | AT4G11290 | 39.937 | 318 | 178 | 7 | 14 | 321 | 12 | 326 | 5.37e-73 | 228 |
| MS.gene76738.t1 | AT2G41480 | 40.606 | 330 | 176 | 7 | 5 | 321 | 6 | 328 | 3.43e-72 | 226 |
| MS.gene76738.t1 | AT4G33420 | 41.720 | 314 | 172 | 7 | 9 | 321 | 22 | 325 | 3.46e-72 | 226 |
| MS.gene76738.t1 | AT4G33420 | 41.720 | 314 | 172 | 7 | 9 | 321 | 69 | 372 | 1.55e-71 | 226 |
| MS.gene76738.t1 | AT5G40150 | 40.645 | 310 | 178 | 5 | 16 | 321 | 21 | 328 | 7.94e-71 | 223 |
| MS.gene76738.t1 | AT4G26010 | 38.730 | 315 | 181 | 7 | 8 | 321 | 6 | 309 | 3.12e-70 | 221 |
| MS.gene76738.t1 | AT4G26010 | 38.730 | 315 | 181 | 7 | 8 | 321 | 34 | 337 | 5.31e-70 | 221 |
| MS.gene76738.t1 | AT5G67400 | 38.245 | 319 | 185 | 5 | 13 | 321 | 13 | 329 | 2.67e-69 | 219 |
| MS.gene76738.t1 | AT3G28200 | 40.594 | 303 | 175 | 5 | 22 | 321 | 16 | 316 | 7.04e-69 | 218 |
| MS.gene76738.t1 | AT5G39580 | 39.077 | 325 | 183 | 7 | 5 | 321 | 2 | 319 | 9.82e-68 | 214 |
| MS.gene76738.t1 | AT2G18980 | 38.369 | 331 | 186 | 7 | 1 | 321 | 1 | 323 | 1.43e-67 | 214 |
| MS.gene76738.t1 | AT2G35380 | 48.800 | 250 | 111 | 5 | 86 | 321 | 1 | 247 | 1.64e-67 | 212 |
| MS.gene76738.t1 | AT1G34510 | 37.987 | 308 | 182 | 6 | 15 | 321 | 10 | 309 | 3.34e-67 | 213 |
| MS.gene76738.t1 | AT5G14130 | 37.072 | 321 | 190 | 6 | 9 | 321 | 14 | 330 | 1.26e-66 | 212 |
| MS.gene76738.t1 | AT5G14130 | 37.072 | 321 | 190 | 6 | 9 | 321 | 55 | 371 | 3.63e-66 | 212 |
| MS.gene76738.t1 | AT5G47000 | 38.226 | 327 | 191 | 7 | 3 | 321 | 7 | 330 | 2.40e-65 | 209 |
| MS.gene76738.t1 | AT4G37530 | 38.889 | 306 | 177 | 4 | 25 | 321 | 25 | 329 | 5.03e-65 | 208 |
| MS.gene76738.t1 | AT1G30870 | 40.850 | 306 | 159 | 8 | 27 | 321 | 51 | 345 | 5.99e-65 | 208 |
| MS.gene76738.t1 | AT3G49960 | 37.107 | 318 | 188 | 5 | 14 | 321 | 14 | 329 | 1.34e-64 | 207 |
| MS.gene76738.t1 | AT4G30170 | 39.088 | 307 | 171 | 7 | 25 | 321 | 25 | 325 | 1.57e-64 | 207 |
| MS.gene76738.t1 | AT5G64110 | 40.308 | 325 | 171 | 8 | 10 | 321 | 16 | 330 | 1.12e-63 | 204 |
| MS.gene76738.t1 | AT5G64100 | 39.934 | 303 | 162 | 7 | 29 | 321 | 39 | 331 | 1.47e-63 | 204 |
| MS.gene76738.t1 | AT4G17690 | 39.610 | 308 | 176 | 6 | 22 | 321 | 17 | 322 | 2.40e-63 | 204 |
| MS.gene76738.t1 | AT4G33870 | 34.320 | 338 | 177 | 6 | 25 | 320 | 66 | 400 | 1.75e-62 | 204 |
| MS.gene76738.t1 | AT1G24110 | 38.284 | 303 | 177 | 5 | 27 | 321 | 22 | 322 | 3.64e-61 | 198 |
| MS.gene76738.t1 | AT4G37520 | 37.255 | 306 | 182 | 4 | 25 | 321 | 25 | 329 | 9.56e-61 | 197 |
| MS.gene76738.t1 | AT2G39040 | 40.129 | 309 | 167 | 10 | 27 | 321 | 46 | 350 | 1.04e-60 | 197 |
| MS.gene76738.t1 | AT4G31760 | 35.294 | 323 | 194 | 4 | 8 | 321 | 10 | 326 | 2.62e-59 | 193 |
| MS.gene76738.t1 | AT4G37520 | 36.928 | 306 | 180 | 5 | 25 | 321 | 25 | 326 | 4.63e-59 | 192 |
| MS.gene76738.t1 | AT2G34060 | 35.693 | 339 | 194 | 8 | 1 | 318 | 8 | 343 | 5.24e-58 | 191 |
| MS.gene76738.t1 | AT5G22410 | 33.231 | 325 | 196 | 10 | 7 | 319 | 8 | 323 | 7.43e-58 | 189 |
| MS.gene76738.t1 | AT4G37530 | 41.176 | 255 | 140 | 4 | 25 | 270 | 25 | 278 | 2.10e-57 | 187 |
| MS.gene76738.t1 | AT4G25980 | 37.785 | 307 | 173 | 6 | 27 | 321 | 26 | 326 | 2.18e-57 | 188 |
| MS.gene76738.t1 | AT5G24070 | 35.866 | 329 | 189 | 8 | 7 | 321 | 15 | 335 | 8.04e-56 | 184 |
| MS.gene76738.t1 | AT1G77100 | 39.739 | 307 | 170 | 10 | 24 | 321 | 19 | 319 | 9.61e-56 | 184 |
| MS.gene76738.t1 | AT4G21960 | 34.259 | 324 | 199 | 6 | 9 | 321 | 7 | 327 | 3.10e-55 | 183 |
| MS.gene76738.t1 | AT2G37130 | 36.213 | 301 | 183 | 6 | 27 | 321 | 30 | 327 | 1.01e-54 | 181 |
| MS.gene76738.t1 | AT2G37130 | 36.242 | 298 | 181 | 6 | 30 | 321 | 2 | 296 | 1.32e-54 | 180 |
| MS.gene76738.t1 | AT2G43480 | 35.276 | 326 | 189 | 8 | 10 | 321 | 18 | 335 | 9.95e-54 | 179 |
| MS.gene76738.t1 | AT2G24800 | 34.426 | 305 | 184 | 5 | 27 | 321 | 31 | 329 | 7.77e-53 | 176 |
| MS.gene76738.t1 | AT3G17070 | 35.161 | 310 | 180 | 8 | 22 | 317 | 33 | 335 | 1.93e-46 | 160 |
| MS.gene76738.t1 | AT5G39580 | 39.906 | 213 | 116 | 6 | 5 | 216 | 2 | 203 | 3.60e-40 | 141 |
| MS.gene76738.t1 | AT4G25980 | 44.253 | 174 | 91 | 4 | 27 | 200 | 71 | 238 | 3.87e-38 | 137 |
| MS.gene76738.t1 | AT3G17070 | 34.981 | 263 | 149 | 9 | 69 | 317 | 18 | 272 | 3.26e-34 | 126 |
| MS.gene76738.t1 | AT2G24800 | 38.021 | 192 | 107 | 6 | 27 | 217 | 31 | 211 | 5.26e-33 | 122 |
| MS.gene76738.t1 | AT4G32320 | 29.615 | 260 | 116 | 10 | 58 | 302 | 114 | 321 | 2.13e-15 | 76.3 |
| MS.gene76738.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 1.17e-12 | 68.6 |
| MS.gene76738.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 1.50e-12 | 68.2 |
Find 53 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGCTGAATTTAAATT+TGG | 0.113514 | 4.1:-70796521 | None:intergenic |
| CAGTATCTTGATGAATTAAT+TGG | 0.226165 | 4.1:-70797937 | None:intergenic |
| GTTTGAGTCTCCGCCTTCTC+TGG | 0.235917 | 4.1:-70797664 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.1:+70796547 | MS.gene76738:CDS |
| CTAATAGTGCTCAAAGCATT+AGG | 0.267809 | 4.1:-70795972 | None:intergenic |
| GGAAATATTAAGCCACTTAC+TGG | 0.284799 | 4.1:+70797879 | MS.gene76738:CDS |
| AAAGACCTCGTTGCCCTATC+TGG | 0.286567 | 4.1:+70797537 | MS.gene76738:CDS |
| TGCAAAATCTATGATTAAGA+TGG | 0.337659 | 4.1:+70797857 | MS.gene76738:CDS |
| TTGTTGAATGGTGGTTATAC+TGG | 0.357733 | 4.1:+70797783 | MS.gene76738:CDS |
| GTGAAGTTCGTTGCAATTGC+AGG | 0.359490 | 4.1:+70797910 | MS.gene76738:CDS |
| AGTCGTGCCGATGCAGATTC+AGG | 0.362977 | 4.1:+70797444 | MS.gene76738:CDS |
| CTATCTGGAGCACACACTAT+TGG | 0.391267 | 4.1:+70797552 | MS.gene76738:CDS |
| CAATAGTGTGTGCTCCAGAT+AGG | 0.400931 | 4.1:-70797551 | None:intergenic |
| TAATAGTGCTCAAAGCATTA+GGG | 0.431156 | 4.1:-70795971 | None:intergenic |
| AGAAAGACTGAATGATGGTC+CGG | 0.452732 | 4.1:-70797475 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.1:+70796601 | MS.gene76738:CDS |
| GAGCATTGGTTAGTAAATAT+AGG | 0.461942 | 4.1:+70797805 | MS.gene76738:CDS |
| TTTGAGTCTCCGCCTTCTCT+GGG | 0.468683 | 4.1:-70797663 | None:intergenic |
| GCAAAATCTATGATTAAGAT+GGG | 0.472740 | 4.1:+70797858 | MS.gene76738:CDS |
| TGTTGTTGTCATTGTAGATT+CGG | 0.474841 | 4.1:-70797602 | None:intergenic |
| TCACCTTGTCTCCCAGTAAG+TGG | 0.477158 | 4.1:-70797891 | None:intergenic |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.1:-70796596 | None:intergenic |
| TCAGATCAAGAATTGTTGAA+TGG | 0.501661 | 4.1:+70797771 | MS.gene76738:CDS |
| CCAAATTTAAATTCAGCTAG+AGG | 0.524290 | 4.1:+70796521 | MS.gene76738:CDS |
| GAAAGACTGAATGATGGTCC+GGG | 0.528311 | 4.1:-70797474 | None:intergenic |
| TCTAGACTCTACACCTTCGA+TGG | 0.530212 | 4.1:+70796478 | MS.gene76738:CDS |
| GGTGTGATTCAGGGTTGTGA+TGG | 0.531565 | 4.1:+70796446 | MS.gene76738:intron |
| CCATCATGGAAAGTAAAACT+AGG | 0.538621 | 4.1:+70797399 | MS.gene76738:CDS |
| CAAAATGTTTGTCCCAGAGA+AGG | 0.543913 | 4.1:+70797651 | MS.gene76738:CDS |
| AATAGTGTGTGCTCCAGATA+GGG | 0.548473 | 4.1:-70797550 | None:intergenic |
| GATCAAGAATTGTTGAATGG+TGG | 0.553509 | 4.1:+70797774 | MS.gene76738:CDS |
| TGCAGTTAGGAGGACCATCA+TGG | 0.571529 | 4.1:+70797385 | MS.gene76738:intron |
| GATATTGCCTGAATCTGCAT+CGG | 0.581586 | 4.1:-70797451 | None:intergenic |
| GCAGATTCAGGCAATATCCC+CGG | 0.595745 | 4.1:+70797456 | MS.gene76738:CDS |
| TATATATGGATGCAGTTAGG+AGG | 0.599797 | 4.1:+70797375 | MS.gene76738:intron |
| GAGCTGCTAACACTATTGCA+TGG | 0.601264 | 4.1:-70795896 | None:intergenic |
| TACACCGGCAAAATTTGATG+TGG | 0.613189 | 4.1:+70797707 | MS.gene76738:CDS |
| GAAATATTAAGCCACTTACT+GGG | 0.616763 | 4.1:+70797880 | MS.gene76738:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.1:+70796569 | MS.gene76738:CDS |
| TGCAAGAGACTCTGTCGTTG+CGG | 0.621078 | 4.1:+70796631 | MS.gene76738:CDS |
| AGTTGAGAAAGACTGAATGA+TGG | 0.626761 | 4.1:-70797480 | None:intergenic |
| TTCAGCTAGAGGATTTGAAG+TGG | 0.627832 | 4.1:+70796532 | MS.gene76738:CDS |
| GTAGTAAAGAAGCACCCATA+CGG | 0.628918 | 4.1:-70796028 | None:intergenic |
| GTTCAAAGAGAGAACCGTAT+GGG | 0.629967 | 4.1:+70796014 | MS.gene76738:CDS |
| AATGTTTGTCCCAGAGAAGG+CGG | 0.632543 | 4.1:+70797654 | MS.gene76738:CDS |
| AGTTCAAAGAGAGAACCGTA+TGG | 0.633955 | 4.1:+70796013 | MS.gene76738:CDS |
| TGGTGGTTATACTGGAGCAT+TGG | 0.634930 | 4.1:+70797791 | MS.gene76738:CDS |
| AGCTCTCGACAGTGTTACAC+CGG | 0.659336 | 4.1:+70797692 | MS.gene76738:CDS |
| AAGCCACTTACTGGGAGACA+AGG | 0.665399 | 4.1:+70797888 | MS.gene76738:CDS |
| AAAGACTGAATGATGGTCCG+GGG | 0.668454 | 4.1:-70797473 | None:intergenic |
| TAACACTGTCGAGAGCTGCA+AGG | 0.690785 | 4.1:-70797686 | None:intergenic |
| CATTGAGAAATACCCATGTG+AGG | 0.697315 | 4.1:-70795868 | None:intergenic |
| GTGCTCCAGATAGGGCAACG+AGG | 0.748414 | 4.1:-70797542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAAAATAAACTTAATAAA+AGG | + | chr4.1:70796793-70796812 | MS.gene76738:intron | 10.0% |
| !! | TTGAAATTTATACTTATATA+TGG | + | chr4.1:70797361-70797380 | MS.gene76738:intron | 10.0% |
| !!! | TTTTGATATAATTTTTTTTG+AGG | - | chr4.1:70796126-70796145 | None:intergenic | 10.0% |
| !! | AATAATATTATGTATACACA+TGG | - | chr4.1:70796102-70796121 | None:intergenic | 15.0% |
| !!! | AAATATTTTCTTAAATTGAC+CGG | + | chr4.1:70797154-70797173 | MS.gene76738:intron | 15.0% |
| !!! | AATAAATTTATCGATTCATT+TGG | - | chr4.1:70796340-70796359 | None:intergenic | 15.0% |
| !!! | AATTTTGATATATTCAAAGT+TGG | - | chr4.1:70796897-70796916 | None:intergenic | 15.0% |
| !!! | GATAATTGAGATTTATTTTA+TGG | + | chr4.1:70797120-70797139 | MS.gene76738:intron | 15.0% |
| !! | TAAACTTAATAAAAGGAAGT+TGG | + | chr4.1:70796800-70796819 | MS.gene76738:intron | 20.0% |
| !!! | ACATGCTACAAATATTTTTT+TGG | + | chr4.1:70797031-70797050 | MS.gene76738:intron | 20.0% |
| !!! | ACATTATATTTTGAACTAGT+CGG | + | chr4.1:70796710-70796729 | MS.gene76738:intron | 20.0% |
| !!! | CATTTTAATTTTTTCTTTGC+TGG | - | chr4.1:70797316-70797335 | None:intergenic | 20.0% |
| !!! | TTTTCTAACTTATCTTTACT+CGG | + | chr4.1:70796844-70796863 | MS.gene76738:intron | 20.0% |
| ! | ATCAAAAATTTCGAAAACCA+AGG | + | chr4.1:70797504-70797523 | MS.gene76738:CDS | 25.0% |
| ! | ATTAATTTATGGTGTGATTC+AGG | + | chr4.1:70796436-70796455 | MS.gene76738:intron | 25.0% |
| ! | CGCAATTGATTAAAAAGAAA+GGG | + | chr4.1:70797739-70797758 | MS.gene76738:CDS | 25.0% |
| ! | GCAAAATCTATGATTAAGAT+GGG | + | chr4.1:70797858-70797877 | MS.gene76738:CDS | 25.0% |
| ! | TGCAAAATCTATGATTAAGA+TGG | + | chr4.1:70797857-70797876 | MS.gene76738:CDS | 25.0% |
| ! | TTAATTTATGGTGTGATTCA+GGG | + | chr4.1:70796437-70796456 | MS.gene76738:intron | 25.0% |
| ! | TTTGATATATTCAAAGTTGG+TGG | - | chr4.1:70796894-70796913 | None:intergenic | 25.0% |
| ACTTATATATGGATGCAGTT+AGG | + | chr4.1:70797372-70797391 | MS.gene76738:intron | 30.0% | |
| CAAATCAGTATATACACGTA+TGG | - | chr4.1:70797257-70797276 | None:intergenic | 30.0% | |
| CCAAATTTAAATTCAGCTAG+AGG | + | chr4.1:70796521-70796540 | MS.gene76738:CDS | 30.0% | |
| CCTCTAGCTGAATTTAAATT+TGG | - | chr4.1:70796524-70796543 | None:intergenic | 30.0% | |
| GAAATATTAAGCCACTTACT+GGG | + | chr4.1:70797880-70797899 | MS.gene76738:CDS | 30.0% | |
| GCGCAATTGATTAAAAAGAA+AGG | + | chr4.1:70797738-70797757 | MS.gene76738:CDS | 30.0% | |
| TAAAACAGAATTAGTCAGCA+TGG | + | chr4.1:70796739-70796758 | MS.gene76738:intron | 30.0% | |
| TCAGATCAAGAATTGTTGAA+TGG | + | chr4.1:70797771-70797790 | MS.gene76738:CDS | 30.0% | |
| TGTTGTTGTCATTGTAGATT+CGG | - | chr4.1:70797605-70797624 | None:intergenic | 30.0% | |
| ! | CATACGTGTATATACTGATT+TGG | + | chr4.1:70797255-70797274 | MS.gene76738:intron | 30.0% |
| ! | TAATAGTGCTCAAAGCATTA+GGG | - | chr4.1:70795974-70795993 | None:intergenic | 30.0% |
| !! | GAGCATTGGTTAGTAAATAT+AGG | + | chr4.1:70797805-70797824 | MS.gene76738:CDS | 30.0% |
| AGTTGAGAAAGACTGAATGA+TGG | - | chr4.1:70797483-70797502 | None:intergenic | 35.0% | |
| CCATCATGGAAAGTAAAACT+AGG | + | chr4.1:70797399-70797418 | MS.gene76738:CDS | 35.0% | |
| GATCAAGAATTGTTGAATGG+TGG | + | chr4.1:70797774-70797793 | MS.gene76738:CDS | 35.0% | |
| GGAAATATTAAGCCACTTAC+TGG | + | chr4.1:70797879-70797898 | MS.gene76738:CDS | 35.0% | |
| TATATATGGATGCAGTTAGG+AGG | + | chr4.1:70797375-70797394 | MS.gene76738:intron | 35.0% | |
| TCAGTATATACACGTATGGA+AGG | - | chr4.1:70797253-70797272 | None:intergenic | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.1:70796601-70796620 | MS.gene76738:CDS | 35.0% | |
| TTGTTGAATGGTGGTTATAC+TGG | + | chr4.1:70797783-70797802 | MS.gene76738:CDS | 35.0% | |
| ! | CTAATAGTGCTCAAAGCATT+AGG | - | chr4.1:70795975-70795994 | None:intergenic | 35.0% |
| ! | TAAGCCACATCAAATTTTGC+CGG | - | chr4.1:70797714-70797733 | None:intergenic | 35.0% |
| ! | TTTCTTAAATTGACCGGTTC+AGG | + | chr4.1:70797160-70797179 | MS.gene76738:intron | 35.0% |
| ! | TTTGTAGCATGTAACTTGTG+TGG | - | chr4.1:70797023-70797042 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.1:70796547-70796566 | MS.gene76738:CDS | 35.0% |
| !!! | CCTAGTTTTACTTTCCATGA+TGG | - | chr4.1:70797402-70797421 | None:intergenic | 35.0% |
| !!! | TTTTTTTCACTGTCCATCGA+AGG | - | chr4.1:70796494-70796513 | None:intergenic | 35.0% |
| AATAGTGTGTGCTCCAGATA+GGG | - | chr4.1:70797553-70797572 | None:intergenic | 40.0% | |
| ACAGAATTAGTCAGCATGGT+TGG | + | chr4.1:70796743-70796762 | MS.gene76738:intron | 40.0% | |
| AGAAAGACTGAATGATGGTC+CGG | - | chr4.1:70797478-70797497 | None:intergenic | 40.0% | |
| AGTTCAAAGAGAGAACCGTA+TGG | + | chr4.1:70796013-70796032 | MS.gene76738:CDS | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.1:70796599-70796618 | None:intergenic | 40.0% | |
| CAAAATGTTTGTCCCAGAGA+AGG | + | chr4.1:70797651-70797670 | MS.gene76738:CDS | 40.0% | |
| CATTGAGAAATACCCATGTG+AGG | - | chr4.1:70795871-70795890 | None:intergenic | 40.0% | |
| GATATTGCCTGAATCTGCAT+CGG | - | chr4.1:70797454-70797473 | None:intergenic | 40.0% | |
| GTTCAAAGAGAGAACCGTAT+GGG | + | chr4.1:70796014-70796033 | MS.gene76738:CDS | 40.0% | |
| TACACCGGCAAAATTTGATG+TGG | + | chr4.1:70797707-70797726 | MS.gene76738:CDS | 40.0% | |
| TCTCAAGTTCTATCCTGAAC+CGG | - | chr4.1:70797176-70797195 | None:intergenic | 40.0% | |
| TTCAGCTAGAGGATTTGAAG+TGG | + | chr4.1:70796532-70796551 | MS.gene76738:CDS | 40.0% | |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.1:70796569-70796588 | MS.gene76738:CDS | 40.0% |
| !! | CAACGAGGTCTTTTTCGTTT+AGG | - | chr4.1:70797530-70797549 | None:intergenic | 40.0% |
| !! | GTAGTAAAGAAGCACCCATA+CGG | - | chr4.1:70796031-70796050 | None:intergenic | 40.0% |
| AAAGACTGAATGATGGTCCG+GGG | - | chr4.1:70797476-70797495 | None:intergenic | 45.0% | |
| AATGTTTGTCCCAGAGAAGG+CGG | + | chr4.1:70797654-70797673 | MS.gene76738:CDS | 45.0% | |
| CAATAGTGTGTGCTCCAGAT+AGG | - | chr4.1:70797554-70797573 | None:intergenic | 45.0% | |
| GAAAGACTGAATGATGGTCC+GGG | - | chr4.1:70797477-70797496 | None:intergenic | 45.0% | |
| GAGCTGCTAACACTATTGCA+TGG | - | chr4.1:70795899-70795918 | None:intergenic | 45.0% | |
| GTGAAGTTCGTTGCAATTGC+AGG | + | chr4.1:70797910-70797929 | MS.gene76738:CDS | 45.0% | |
| TCTAGACTCTACACCTTCGA+TGG | + | chr4.1:70796478-70796497 | MS.gene76738:CDS | 45.0% | |
| TGAAGACCAGCAAACTTGCA+TGG | - | chr4.1:70797228-70797247 | None:intergenic | 45.0% | |
| TGGTGGTTATACTGGAGCAT+TGG | + | chr4.1:70797791-70797810 | MS.gene76738:CDS | 45.0% | |
| ! | CTATCTGGAGCACACACTAT+TGG | + | chr4.1:70797552-70797571 | MS.gene76738:CDS | 45.0% |
| !! | GGTCTTTTTCGTTTAGGCCT+TGG | - | chr4.1:70797524-70797543 | None:intergenic | 45.0% |
| !!! | AATTTAAGAAAATATTTTAT+AGG | - | chr4.1:70797151-70797170 | None:intergenic | 5.0% |
| !!! | TTATATTTTATTTTATCAAA+TGG | + | chr4.1:70796771-70796790 | MS.gene76738:intron | 5.0% |
| !!! | TTATTTTAATGATTAATTTA+TGG | + | chr4.1:70796355-70796374 | MS.gene76738:intron | 5.0% |
| AAAGACCTCGTTGCCCTATC+TGG | + | chr4.1:70797537-70797556 | MS.gene76738:CDS | 50.0% | |
| AAGCCACTTACTGGGAGACA+AGG | + | chr4.1:70797888-70797907 | MS.gene76738:CDS | 50.0% | |
| AGCTCTCGACAGTGTTACAC+CGG | + | chr4.1:70797692-70797711 | MS.gene76738:CDS | 50.0% | |
| GCAGATTCAGGCAATATCCC+CGG | + | chr4.1:70797456-70797475 | MS.gene76738:CDS | 50.0% | |
| GGTGTGATTCAGGGTTGTGA+TGG | + | chr4.1:70796446-70796465 | MS.gene76738:intron | 50.0% | |
| GTCACTCCATGCAAGTTTGC+TGG | + | chr4.1:70797219-70797238 | MS.gene76738:intron | 50.0% | |
| TAACACTGTCGAGAGCTGCA+AGG | - | chr4.1:70797689-70797708 | None:intergenic | 50.0% | |
| TCACCTTGTCTCCCAGTAAG+TGG | - | chr4.1:70797894-70797913 | None:intergenic | 50.0% | |
| TGCAAGAGACTCTGTCGTTG+CGG | + | chr4.1:70796631-70796650 | MS.gene76738:CDS | 50.0% | |
| TGCAGTTAGGAGGACCATCA+TGG | + | chr4.1:70797385-70797404 | MS.gene76738:intron | 50.0% | |
| TTTGAGTCTCCGCCTTCTCT+GGG | - | chr4.1:70797666-70797685 | None:intergenic | 50.0% | |
| GTTTGAGTCTCCGCCTTCTC+TGG | - | chr4.1:70797667-70797686 | None:intergenic | 55.0% | |
| ! | AGTCGTGCCGATGCAGATTC+AGG | + | chr4.1:70797444-70797463 | MS.gene76738:CDS | 55.0% |
| GTGCTCCAGATAGGGCAACG+AGG | - | chr4.1:70797545-70797564 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 70795864 | 70797944 | 70795864 | ID=MS.gene76738 |
| chr4.1 | mRNA | 70795864 | 70797944 | 70795864 | ID=MS.gene76738.t1;Parent=MS.gene76738 |
| chr4.1 | exon | 70795864 | 70796079 | 70795864 | ID=MS.gene76738.t1.exon1;Parent=MS.gene76738.t1 |
| chr4.1 | CDS | 70795864 | 70796079 | 70795864 | ID=cds.MS.gene76738.t1;Parent=MS.gene76738.t1 |
| chr4.1 | exon | 70796458 | 70796652 | 70796458 | ID=MS.gene76738.t1.exon2;Parent=MS.gene76738.t1 |
| chr4.1 | CDS | 70796458 | 70796652 | 70796458 | ID=cds.MS.gene76738.t1;Parent=MS.gene76738.t1 |
| chr4.1 | exon | 70797390 | 70797944 | 70797390 | ID=MS.gene76738.t1.exon3;Parent=MS.gene76738.t1 |
| chr4.1 | CDS | 70797390 | 70797944 | 70797390 | ID=cds.MS.gene76738.t1;Parent=MS.gene76738.t1 |
| Gene Sequence |
| Protein sequence |
