Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90861.t1 | XP_013470434.1 | 99.5 | 190 | 1 | 0 | 42 | 231 | 26 | 215 | 1.40E-99 | 372.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90861.t1 | P28186 | 91.6 | 190 | 16 | 0 | 42 | 231 | 26 | 215 | 3.5e-94 | 345.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90861.t1 | A0A072VRS4 | 99.5 | 190 | 1 | 0 | 42 | 231 | 26 | 215 | 1.0e-99 | 372.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene90861 | 0.829895 | 3.98E-55 | -1.69E-46 |
MS.gene049255 | MS.gene90861 | 0.807666 | 4.52E-50 | -1.69E-46 |
MS.gene050437 | MS.gene90861 | 0.8437 | 1.19E-58 | -1.69E-46 |
MS.gene050689 | MS.gene90861 | 0.817715 | 2.86E-52 | -1.69E-46 |
MS.gene050752 | MS.gene90861 | 0.872751 | 2.50E-67 | -1.69E-46 |
MS.gene050838 | MS.gene90861 | 0.819294 | 1.25E-52 | -1.69E-46 |
MS.gene050955 | MS.gene90861 | 0.857429 | 1.64E-62 | -1.69E-46 |
MS.gene051003 | MS.gene90861 | 0.876132 | 1.78E-68 | -1.69E-46 |
MS.gene051234 | MS.gene90861 | 0.81149 | 6.82E-51 | -1.69E-46 |
MS.gene051243 | MS.gene90861 | 0.806453 | 8.17E-50 | -1.69E-46 |
MS.gene051328 | MS.gene90861 | 0.804012 | 2.65E-49 | -1.69E-46 |
MS.gene051343 | MS.gene90861 | 0.830771 | 2.43E-55 | -1.69E-46 |
MS.gene05134 | MS.gene90861 | 0.808607 | 2.85E-50 | -1.69E-46 |
MS.gene051676 | MS.gene90861 | 0.815702 | 8.07E-52 | -1.69E-46 |
MS.gene051856 | MS.gene90861 | 0.811813 | 5.80E-51 | -1.69E-46 |
MS.gene05188 | MS.gene90861 | 0.822261 | 2.60E-53 | -1.69E-46 |
MS.gene051902 | MS.gene90861 | 0.800306 | 1.53E-48 | -1.69E-46 |
MS.gene051975 | MS.gene90861 | 0.849763 | 2.62E-60 | -1.69E-46 |
MS.gene052072 | MS.gene90861 | 0.845832 | 3.17E-59 | -1.69E-46 |
MS.gene052335 | MS.gene90861 | 0.814983 | 1.17E-51 | -1.69E-46 |
MS.gene052434 | MS.gene90861 | 0.800568 | 1.36E-48 | -1.69E-46 |
MS.gene052516 | MS.gene90861 | 0.805915 | 1.06E-49 | -1.69E-46 |
MS.gene052947 | MS.gene90861 | 0.826862 | 2.15E-54 | -1.69E-46 |
MS.gene053008 | MS.gene90861 | 0.804123 | 2.51E-49 | -1.69E-46 |
MS.gene053045 | MS.gene90861 | 0.807017 | 6.21E-50 | -1.69E-46 |
MS.gene053058 | MS.gene90861 | 0.804759 | 1.85E-49 | -1.69E-46 |
MS.gene053590 | MS.gene90861 | 0.823312 | 1.48E-53 | -1.69E-46 |
MS.gene05364 | MS.gene90861 | 0.818041 | 2.41E-52 | -1.69E-46 |
MS.gene054403 | MS.gene90861 | 0.870344 | 1.57E-66 | -1.69E-46 |
MS.gene05469 | MS.gene90861 | 0.809782 | 1.60E-50 | -1.69E-46 |
MS.gene05517 | MS.gene90861 | 0.827675 | 1.37E-54 | -1.69E-46 |
MS.gene055513 | MS.gene90861 | 0.818546 | 1.85E-52 | -1.69E-46 |
MS.gene055623 | MS.gene90861 | 0.802763 | 4.81E-49 | -1.69E-46 |
MS.gene055841 | MS.gene90861 | 0.81839 | 2.01E-52 | -1.69E-46 |
MS.gene056181 | MS.gene90861 | 0.844574 | 6.95E-59 | -1.69E-46 |
MS.gene056580 | MS.gene90861 | 0.801095 | 1.06E-48 | -1.69E-46 |
MS.gene056699 | MS.gene90861 | 0.829856 | 4.07E-55 | -1.69E-46 |
MS.gene056787 | MS.gene90861 | 0.840825 | 6.89E-58 | -1.69E-46 |
MS.gene056986 | MS.gene90861 | 0.849936 | 2.35E-60 | -1.69E-46 |
MS.gene057057 | MS.gene90861 | 0.815385 | 9.50E-52 | -1.69E-46 |
MS.gene057102 | MS.gene90861 | 0.805921 | 1.06E-49 | -1.69E-46 |
MS.gene057140 | MS.gene90861 | 0.836983 | 6.79E-57 | -1.69E-46 |
MS.gene057234 | MS.gene90861 | 0.838636 | 2.56E-57 | -1.69E-46 |
MS.gene057693 | MS.gene90861 | 0.812429 | 4.26E-51 | -1.69E-46 |
MS.gene057694 | MS.gene90861 | 0.818154 | 2.27E-52 | -1.69E-46 |
MS.gene057705 | MS.gene90861 | 0.816549 | 5.22E-52 | -1.69E-46 |
MS.gene05781 | MS.gene90861 | 0.814786 | 1.29E-51 | -1.69E-46 |
MS.gene058008 | MS.gene90861 | 0.803585 | 3.25E-49 | -1.69E-46 |
MS.gene058055 | MS.gene90861 | 0.813447 | 2.55E-51 | -1.69E-46 |
MS.gene058906 | MS.gene90861 | 0.825654 | 4.17E-54 | -1.69E-46 |
MS.gene059146 | MS.gene90861 | 0.84086 | 6.74E-58 | -1.69E-46 |
MS.gene059151 | MS.gene90861 | 0.8237 | 1.20E-53 | -1.69E-46 |
MS.gene06011 | MS.gene90861 | 0.820511 | 6.60E-53 | -1.69E-46 |
MS.gene060586 | MS.gene90861 | 0.804919 | 1.71E-49 | -1.69E-46 |
MS.gene060763 | MS.gene90861 | 0.805888 | 1.07E-49 | -1.69E-46 |
MS.gene060935 | MS.gene90861 | 0.815954 | 7.09E-52 | -1.69E-46 |
MS.gene060937 | MS.gene90861 | 0.805239 | 1.47E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90861.t1 | MTR_1g115325 | 99.474 | 190 | 1 | 0 | 42 | 231 | 26 | 215 | 1.32e-140 | 392 |
MS.gene90861.t1 | MTR_1g068740 | 91.053 | 190 | 17 | 0 | 42 | 231 | 26 | 215 | 2.70e-129 | 363 |
MS.gene90861.t1 | MTR_1g068730 | 90.526 | 190 | 18 | 0 | 42 | 231 | 26 | 215 | 9.61e-129 | 362 |
MS.gene90861.t1 | MTR_7g100020 | 93.684 | 190 | 12 | 0 | 42 | 231 | 26 | 215 | 3.99e-126 | 356 |
MS.gene90861.t1 | MTR_4g063160 | 89.062 | 192 | 18 | 2 | 42 | 231 | 26 | 216 | 2.71e-122 | 346 |
MS.gene90861.t1 | MTR_2g096550 | 76.963 | 191 | 40 | 3 | 42 | 231 | 26 | 213 | 1.44e-103 | 298 |
MS.gene90861.t1 | MTR_1g068740 | 96.552 | 116 | 4 | 0 | 42 | 157 | 26 | 141 | 1.04e-78 | 235 |
MS.gene90861.t1 | MTR_1g068730 | 95.690 | 116 | 5 | 0 | 42 | 157 | 26 | 141 | 1.07e-77 | 231 |
MS.gene90861.t1 | MTR_7g081700 | 58.421 | 190 | 70 | 3 | 42 | 230 | 19 | 200 | 2.38e-75 | 226 |
MS.gene90861.t1 | MTR_8g006970 | 57.068 | 191 | 72 | 3 | 42 | 230 | 33 | 215 | 2.29e-72 | 219 |
MS.gene90861.t1 | MTR_2g005500 | 52.632 | 190 | 84 | 2 | 42 | 231 | 20 | 203 | 8.32e-69 | 210 |
MS.gene90861.t1 | MTR_8g006970 | 63.871 | 155 | 55 | 1 | 42 | 196 | 19 | 172 | 3.65e-68 | 207 |
MS.gene90861.t1 | MTR_4g099470 | 54.190 | 179 | 73 | 3 | 53 | 230 | 6 | 176 | 5.72e-66 | 202 |
MS.gene90861.t1 | MTR_2g027660 | 46.154 | 195 | 98 | 3 | 42 | 230 | 17 | 210 | 6.93e-53 | 170 |
MS.gene90861.t1 | MTR_6g021790 | 46.154 | 195 | 98 | 3 | 42 | 230 | 17 | 210 | 1.60e-52 | 169 |
MS.gene90861.t1 | MTR_4g064897 | 43.655 | 197 | 97 | 5 | 42 | 230 | 23 | 213 | 1.78e-49 | 161 |
MS.gene90861.t1 | MTR_3g069510 | 42.640 | 197 | 100 | 4 | 42 | 230 | 23 | 214 | 6.36e-49 | 160 |
MS.gene90861.t1 | MTR_8g031660 | 48.101 | 158 | 81 | 1 | 42 | 199 | 17 | 173 | 1.26e-48 | 159 |
MS.gene90861.t1 | MTR_7g103070 | 44.845 | 194 | 95 | 5 | 42 | 230 | 27 | 213 | 4.75e-48 | 157 |
MS.gene90861.t1 | MTR_1g062760 | 47.120 | 191 | 94 | 6 | 42 | 230 | 25 | 210 | 7.55e-48 | 157 |
MS.gene90861.t1 | MTR_8g031870 | 49.020 | 153 | 77 | 1 | 42 | 194 | 17 | 168 | 3.22e-47 | 154 |
MS.gene90861.t1 | MTR_1g078200 | 41.667 | 204 | 100 | 4 | 41 | 230 | 24 | 222 | 4.54e-47 | 155 |
MS.gene90861.t1 | MTR_2g014990 | 42.132 | 197 | 101 | 3 | 42 | 230 | 24 | 215 | 1.12e-46 | 154 |
MS.gene90861.t1 | MTR_3g086980 | 40.609 | 197 | 109 | 3 | 41 | 230 | 26 | 221 | 1.55e-46 | 154 |
MS.gene90861.t1 | MTR_8g031680 | 44.828 | 174 | 89 | 3 | 42 | 211 | 17 | 187 | 3.34e-46 | 152 |
MS.gene90861.t1 | MTR_8g089985 | 47.059 | 153 | 80 | 1 | 41 | 193 | 27 | 178 | 6.12e-46 | 152 |
MS.gene90861.t1 | MTR_2g005510 | 42.268 | 194 | 106 | 4 | 42 | 230 | 26 | 218 | 7.18e-46 | 152 |
MS.gene90861.t1 | MTR_7g051940 | 40.104 | 192 | 111 | 2 | 42 | 230 | 24 | 214 | 1.28e-45 | 151 |
MS.gene90861.t1 | MTR_4g088090 | 40.102 | 197 | 105 | 3 | 42 | 230 | 24 | 215 | 2.21e-45 | 150 |
MS.gene90861.t1 | MTR_4g079350 | 41.117 | 197 | 103 | 4 | 42 | 230 | 24 | 215 | 5.66e-45 | 150 |
MS.gene90861.t1 | MTR_7g405790 | 38.974 | 195 | 112 | 3 | 42 | 230 | 26 | 219 | 1.80e-44 | 149 |
MS.gene90861.t1 | MTR_2g075950 | 40.933 | 193 | 109 | 2 | 42 | 230 | 24 | 215 | 1.88e-44 | 148 |
MS.gene90861.t1 | MTR_8g031830 | 41.237 | 194 | 96 | 4 | 42 | 230 | 17 | 197 | 7.52e-44 | 146 |
MS.gene90861.t1 | MTR_8g027220 | 46.053 | 152 | 81 | 1 | 42 | 193 | 37 | 187 | 9.69e-44 | 147 |
MS.gene90861.t1 | MTR_1g052475 | 38.424 | 203 | 107 | 3 | 42 | 231 | 26 | 223 | 6.45e-43 | 144 |
MS.gene90861.t1 | MTR_8g093740 | 42.408 | 191 | 102 | 5 | 42 | 230 | 24 | 208 | 7.90e-43 | 144 |
MS.gene90861.t1 | MTR_1g029450 | 43.814 | 194 | 96 | 7 | 42 | 230 | 28 | 213 | 7.93e-43 | 144 |
MS.gene90861.t1 | MTR_1g090717 | 43.229 | 192 | 100 | 6 | 42 | 230 | 26 | 211 | 1.18e-42 | 144 |
MS.gene90861.t1 | MTR_8g036220 | 40.099 | 202 | 106 | 3 | 42 | 230 | 27 | 226 | 3.26e-42 | 143 |
MS.gene90861.t1 | MTR_2g083860 | 46.711 | 152 | 80 | 1 | 42 | 193 | 24 | 174 | 3.43e-42 | 142 |
MS.gene90861.t1 | MTR_3g096350 | 43.750 | 192 | 98 | 7 | 42 | 230 | 23 | 207 | 4.01e-42 | 142 |
MS.gene90861.t1 | MTR_6g079550 | 39.086 | 197 | 107 | 4 | 42 | 230 | 23 | 214 | 4.09e-41 | 140 |
MS.gene90861.t1 | MTR_2g090865 | 39.796 | 196 | 106 | 4 | 42 | 230 | 22 | 212 | 1.63e-40 | 138 |
MS.gene90861.t1 | MTR_0262s0050 | 44.079 | 152 | 84 | 1 | 42 | 193 | 26 | 176 | 3.50e-40 | 137 |
MS.gene90861.t1 | MTR_8g103550 | 38.624 | 189 | 105 | 4 | 43 | 231 | 21 | 198 | 2.29e-39 | 135 |
MS.gene90861.t1 | MTR_8g093740 | 40.462 | 173 | 96 | 4 | 60 | 230 | 8 | 175 | 1.74e-38 | 132 |
MS.gene90861.t1 | MTR_3g064390 | 37.234 | 188 | 108 | 4 | 43 | 230 | 22 | 199 | 1.79e-38 | 132 |
MS.gene90861.t1 | MTR_1g094220 | 42.581 | 155 | 87 | 2 | 42 | 195 | 42 | 195 | 3.09e-38 | 132 |
MS.gene90861.t1 | MTR_8g090215 | 37.566 | 189 | 114 | 3 | 42 | 229 | 20 | 205 | 5.15e-38 | 131 |
MS.gene90861.t1 | MTR_5g076590 | 37.766 | 188 | 107 | 4 | 43 | 230 | 22 | 199 | 6.26e-38 | 131 |
MS.gene90861.t1 | MTR_7g103070 | 44.654 | 159 | 76 | 5 | 77 | 230 | 6 | 157 | 3.12e-37 | 128 |
MS.gene90861.t1 | MTR_1g094220 | 43.624 | 149 | 82 | 2 | 42 | 189 | 42 | 189 | 4.49e-37 | 129 |
MS.gene90861.t1 | MTR_2g102060 | 37.766 | 188 | 106 | 4 | 43 | 230 | 22 | 198 | 1.22e-36 | 128 |
MS.gene90861.t1 | MTR_1g094220 | 43.836 | 146 | 80 | 2 | 42 | 186 | 42 | 186 | 1.22e-36 | 128 |
MS.gene90861.t1 | MTR_1g094220 | 43.836 | 146 | 80 | 2 | 42 | 186 | 42 | 186 | 1.98e-36 | 128 |
MS.gene90861.t1 | MTR_3g087160 | 36.170 | 188 | 117 | 2 | 42 | 229 | 20 | 204 | 3.25e-36 | 127 |
MS.gene90861.t1 | MTR_8g107070 | 45.946 | 148 | 79 | 1 | 42 | 189 | 25 | 171 | 3.42e-36 | 129 |
MS.gene90861.t1 | MTR_5g013900 | 36.508 | 189 | 116 | 3 | 42 | 229 | 20 | 205 | 7.55e-36 | 126 |
MS.gene90861.t1 | MTR_2g005500 | 36.364 | 198 | 80 | 3 | 34 | 231 | 12 | 163 | 4.88e-35 | 122 |
MS.gene90861.t1 | MTR_7g117910 | 46.610 | 118 | 62 | 1 | 42 | 159 | 31 | 147 | 1.30e-34 | 123 |
MS.gene90861.t1 | MTR_4g098950 | 34.737 | 190 | 120 | 3 | 42 | 230 | 20 | 206 | 1.44e-34 | 122 |
MS.gene90861.t1 | MTR_4g069850 | 39.344 | 183 | 95 | 6 | 42 | 208 | 19 | 201 | 3.61e-33 | 119 |
MS.gene90861.t1 | MTR_3g096350 | 50.926 | 108 | 50 | 3 | 42 | 147 | 23 | 129 | 1.74e-31 | 113 |
MS.gene90861.t1 | MTR_3g096350 | 50.926 | 108 | 50 | 3 | 42 | 147 | 23 | 129 | 3.29e-31 | 112 |
MS.gene90861.t1 | MTR_8g092020 | 34.021 | 194 | 113 | 3 | 42 | 229 | 23 | 207 | 2.59e-30 | 112 |
MS.gene90861.t1 | MTR_4g012940 | 34.021 | 194 | 115 | 4 | 42 | 229 | 19 | 205 | 4.52e-30 | 111 |
MS.gene90861.t1 | MTR_2g101890 | 34.872 | 195 | 113 | 4 | 42 | 230 | 21 | 207 | 1.24e-29 | 110 |
MS.gene90861.t1 | MTR_1g097420 | 34.031 | 191 | 116 | 4 | 42 | 224 | 19 | 207 | 6.84e-29 | 108 |
MS.gene90861.t1 | MTR_1g097420 | 34.031 | 191 | 116 | 4 | 42 | 224 | 46 | 234 | 1.90e-28 | 107 |
MS.gene90861.t1 | MTR_6g039490 | 37.179 | 156 | 92 | 3 | 42 | 191 | 19 | 174 | 4.18e-26 | 101 |
MS.gene90861.t1 | MTR_3g064390 | 37.838 | 111 | 69 | 0 | 43 | 153 | 22 | 132 | 1.44e-25 | 98.2 |
MS.gene90861.t1 | MTR_4g088055 | 33.333 | 156 | 91 | 5 | 42 | 186 | 17 | 170 | 1.63e-23 | 94.0 |
MS.gene90861.t1 | MTR_1g059590 | 40.909 | 154 | 83 | 3 | 42 | 195 | 439 | 584 | 4.16e-23 | 97.4 |
MS.gene90861.t1 | MTR_1g059590 | 40.909 | 154 | 83 | 3 | 42 | 195 | 406 | 551 | 4.52e-23 | 97.4 |
MS.gene90861.t1 | MTR_2g090875 | 32.692 | 156 | 92 | 5 | 42 | 186 | 17 | 170 | 1.82e-22 | 91.3 |
MS.gene90861.t1 | MTR_4g073250 | 33.939 | 165 | 96 | 6 | 42 | 195 | 17 | 179 | 3.46e-22 | 90.5 |
MS.gene90861.t1 | MTR_3g078260 | 32.051 | 156 | 93 | 5 | 42 | 186 | 19 | 172 | 2.67e-21 | 88.6 |
MS.gene90861.t1 | MTR_8g075240 | 32.051 | 156 | 93 | 6 | 42 | 186 | 17 | 170 | 3.35e-20 | 85.1 |
MS.gene90861.t1 | MTR_6g087980 | 30.769 | 156 | 95 | 5 | 42 | 186 | 17 | 170 | 7.70e-20 | 84.3 |
MS.gene90861.t1 | MTR_5g022600 | 32.051 | 156 | 93 | 6 | 42 | 186 | 17 | 170 | 8.57e-20 | 84.0 |
MS.gene90861.t1 | MTR_3g107717 | 27.807 | 187 | 126 | 5 | 43 | 224 | 25 | 207 | 6.99e-19 | 82.4 |
MS.gene90861.t1 | MTR_3g107713 | 27.513 | 189 | 121 | 5 | 43 | 219 | 25 | 209 | 9.73e-19 | 82.0 |
MS.gene90861.t1 | MTR_3g107707 | 27.513 | 189 | 121 | 5 | 43 | 219 | 25 | 209 | 1.16e-18 | 81.6 |
MS.gene90861.t1 | MTR_1452s0010 | 47.143 | 70 | 37 | 0 | 56 | 125 | 6 | 75 | 2.26e-17 | 75.1 |
MS.gene90861.t1 | MTR_8g031810 | 40.860 | 93 | 41 | 1 | 42 | 134 | 17 | 95 | 9.94e-17 | 73.2 |
MS.gene90861.t1 | MTR_3g078260 | 34.286 | 105 | 66 | 3 | 42 | 145 | 19 | 121 | 3.87e-15 | 70.5 |
MS.gene90861.t1 | MTR_1686s0010 | 38.571 | 70 | 43 | 0 | 56 | 125 | 6 | 75 | 2.20e-13 | 64.3 |
MS.gene90861.t1 | MTR_4g113620 | 29.565 | 115 | 77 | 2 | 79 | 193 | 52 | 162 | 5.91e-13 | 65.9 |
MS.gene90861.t1 | MTR_2g078000 | 52.174 | 46 | 22 | 0 | 92 | 137 | 46 | 91 | 2.44e-12 | 61.6 |
MS.gene90861.t1 | MTR_1g069245 | 38.462 | 78 | 47 | 1 | 60 | 137 | 122 | 198 | 2.04e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90861.t1 | AT5G59840 | 92.105 | 190 | 15 | 0 | 42 | 231 | 26 | 215 | 1.27e-129 | 365 |
MS.gene90861.t1 | AT3G46060 | 91.579 | 190 | 16 | 0 | 42 | 231 | 26 | 215 | 1.99e-129 | 364 |
MS.gene90861.t1 | AT3G46060 | 91.579 | 190 | 16 | 0 | 42 | 231 | 26 | 215 | 1.99e-129 | 364 |
MS.gene90861.t1 | AT3G46060 | 91.579 | 190 | 16 | 0 | 42 | 231 | 26 | 215 | 1.99e-129 | 364 |
MS.gene90861.t1 | AT3G53610 | 90.526 | 190 | 18 | 0 | 42 | 231 | 26 | 215 | 5.33e-128 | 360 |
MS.gene90861.t1 | AT3G53610 | 90.526 | 190 | 18 | 0 | 42 | 231 | 26 | 215 | 5.33e-128 | 360 |
MS.gene90861.t1 | AT3G53610 | 90.526 | 190 | 18 | 0 | 42 | 231 | 26 | 215 | 5.33e-128 | 360 |
MS.gene90861.t1 | AT5G03520 | 85.185 | 189 | 27 | 1 | 42 | 230 | 26 | 213 | 6.74e-111 | 317 |
MS.gene90861.t1 | AT3G09900 | 83.158 | 190 | 31 | 1 | 42 | 230 | 26 | 215 | 1.69e-108 | 311 |
MS.gene90861.t1 | AT5G03520 | 80.114 | 176 | 34 | 1 | 55 | 230 | 29 | 203 | 8.56e-102 | 294 |
MS.gene90861.t1 | AT1G02130 | 58.115 | 191 | 70 | 3 | 42 | 230 | 19 | 201 | 8.72e-77 | 230 |
MS.gene90861.t1 | AT4G17530 | 55.789 | 190 | 75 | 3 | 42 | 230 | 19 | 200 | 2.33e-71 | 216 |
MS.gene90861.t1 | AT5G47200 | 55.789 | 190 | 75 | 3 | 42 | 230 | 19 | 200 | 6.65e-71 | 215 |
MS.gene90861.t1 | AT3G11730 | 55.155 | 194 | 75 | 4 | 42 | 231 | 19 | 204 | 1.07e-70 | 215 |
MS.gene90861.t1 | AT4G35860 | 48.469 | 196 | 94 | 4 | 42 | 231 | 17 | 211 | 5.36e-57 | 180 |
MS.gene90861.t1 | AT4G17160 | 47.396 | 192 | 96 | 3 | 42 | 231 | 17 | 205 | 2.71e-55 | 176 |
MS.gene90861.t1 | AT4G17170 | 46.429 | 196 | 98 | 3 | 42 | 231 | 17 | 211 | 6.46e-55 | 175 |
MS.gene90861.t1 | AT1G09630 | 42.487 | 193 | 106 | 2 | 42 | 230 | 23 | 214 | 1.14e-48 | 159 |
MS.gene90861.t1 | AT5G47520 | 42.786 | 201 | 99 | 5 | 41 | 230 | 24 | 219 | 2.23e-47 | 156 |
MS.gene90861.t1 | AT4G39990 | 42.347 | 196 | 106 | 3 | 41 | 230 | 27 | 221 | 8.81e-47 | 154 |
MS.gene90861.t1 | AT2G43130 | 39.791 | 191 | 112 | 2 | 42 | 230 | 23 | 212 | 1.07e-46 | 154 |
MS.gene90861.t1 | AT1G07410 | 39.791 | 191 | 112 | 2 | 42 | 230 | 23 | 212 | 1.17e-46 | 154 |
MS.gene90861.t1 | AT1G16920 | 43.367 | 196 | 99 | 4 | 42 | 230 | 24 | 214 | 1.43e-46 | 154 |
MS.gene90861.t1 | AT4G18430 | 41.117 | 197 | 103 | 3 | 42 | 230 | 24 | 215 | 3.07e-46 | 153 |
MS.gene90861.t1 | AT1G01200 | 46.497 | 157 | 84 | 0 | 41 | 197 | 38 | 194 | 3.71e-46 | 153 |
MS.gene90861.t1 | AT5G59150 | 39.698 | 199 | 104 | 3 | 42 | 230 | 23 | 215 | 6.00e-46 | 152 |
MS.gene90861.t1 | AT3G46830 | 48.026 | 152 | 78 | 1 | 42 | 193 | 23 | 173 | 7.29e-46 | 152 |
MS.gene90861.t1 | AT3G46830 | 48.026 | 152 | 78 | 1 | 42 | 193 | 23 | 173 | 7.29e-46 | 152 |
MS.gene90861.t1 | AT3G07410 | 48.684 | 152 | 77 | 1 | 42 | 193 | 23 | 173 | 9.14e-46 | 152 |
MS.gene90861.t1 | AT4G35860 | 47.879 | 165 | 79 | 4 | 73 | 231 | 2 | 165 | 1.49e-45 | 149 |
MS.gene90861.t1 | AT5G60860 | 41.117 | 197 | 103 | 3 | 42 | 230 | 24 | 215 | 1.52e-45 | 151 |
MS.gene90861.t1 | AT1G05810 | 40.206 | 194 | 110 | 3 | 42 | 230 | 23 | 215 | 1.65e-45 | 151 |
MS.gene90861.t1 | AT1G05810 | 40.206 | 194 | 110 | 3 | 42 | 230 | 69 | 261 | 3.59e-45 | 152 |
MS.gene90861.t1 | AT3G15060 | 41.919 | 198 | 100 | 4 | 42 | 230 | 24 | 215 | 6.26e-45 | 150 |
MS.gene90861.t1 | AT2G31680 | 46.711 | 152 | 80 | 1 | 42 | 193 | 23 | 173 | 6.77e-45 | 149 |
MS.gene90861.t1 | AT2G33870 | 41.206 | 199 | 103 | 4 | 42 | 231 | 24 | 217 | 1.74e-44 | 149 |
MS.gene90861.t1 | AT5G47960 | 47.059 | 153 | 80 | 1 | 41 | 193 | 25 | 176 | 1.76e-44 | 149 |
MS.gene90861.t1 | AT5G45750 | 39.583 | 192 | 112 | 2 | 42 | 230 | 24 | 214 | 5.22e-44 | 147 |
MS.gene90861.t1 | AT1G18200 | 47.205 | 161 | 84 | 1 | 41 | 201 | 23 | 182 | 6.27e-44 | 147 |
MS.gene90861.t1 | AT5G65270 | 39.196 | 199 | 111 | 4 | 41 | 230 | 27 | 224 | 1.16e-43 | 147 |
MS.gene90861.t1 | AT1G73640 | 44.886 | 176 | 92 | 2 | 41 | 212 | 23 | 197 | 4.42e-43 | 145 |
MS.gene90861.t1 | AT3G12160 | 39.286 | 196 | 112 | 2 | 42 | 231 | 26 | 220 | 5.77e-43 | 145 |
MS.gene90861.t1 | AT1G28550 | 40.404 | 198 | 104 | 4 | 42 | 230 | 24 | 216 | 5.87e-43 | 144 |
MS.gene90861.t1 | AT5G03530 | 44.041 | 193 | 97 | 6 | 42 | 230 | 24 | 209 | 1.09e-42 | 144 |
MS.gene90861.t1 | AT5G03530 | 44.041 | 193 | 97 | 6 | 42 | 230 | 24 | 209 | 1.09e-42 | 144 |
MS.gene90861.t1 | AT4G18800 | 39.474 | 190 | 113 | 2 | 42 | 230 | 24 | 212 | 3.95e-42 | 142 |
MS.gene90861.t1 | AT1G43890 | 44.382 | 178 | 95 | 4 | 42 | 217 | 24 | 199 | 6.26e-42 | 142 |
MS.gene90861.t1 | AT1G43890 | 44.382 | 178 | 95 | 4 | 42 | 217 | 24 | 199 | 6.26e-42 | 142 |
MS.gene90861.t1 | AT1G43890 | 44.382 | 178 | 95 | 4 | 42 | 217 | 24 | 199 | 6.26e-42 | 142 |
MS.gene90861.t1 | AT1G06400 | 39.062 | 192 | 113 | 2 | 42 | 230 | 24 | 214 | 6.64e-42 | 142 |
MS.gene90861.t1 | AT3G54840 | 43.871 | 155 | 85 | 2 | 42 | 195 | 10 | 163 | 4.16e-41 | 138 |
MS.gene90861.t1 | AT3G54840 | 43.871 | 155 | 85 | 2 | 42 | 195 | 44 | 197 | 5.96e-41 | 139 |
MS.gene90861.t1 | AT3G54840 | 41.379 | 174 | 100 | 2 | 14 | 186 | 16 | 188 | 2.83e-40 | 137 |
MS.gene90861.t1 | AT3G09910 | 45.098 | 153 | 81 | 3 | 63 | 213 | 44 | 195 | 1.12e-38 | 133 |
MS.gene90861.t1 | AT3G09910 | 45.098 | 153 | 81 | 3 | 63 | 213 | 44 | 195 | 1.12e-38 | 133 |
MS.gene90861.t1 | AT5G59150 | 39.881 | 168 | 85 | 3 | 73 | 230 | 3 | 164 | 1.14e-37 | 129 |
MS.gene90861.t1 | AT4G19640 | 38.095 | 189 | 107 | 4 | 43 | 231 | 22 | 200 | 2.99e-37 | 129 |
MS.gene90861.t1 | AT5G10260 | 36.842 | 190 | 117 | 2 | 42 | 231 | 20 | 206 | 3.22e-37 | 129 |
MS.gene90861.t1 | AT4G39890 | 43.333 | 150 | 83 | 2 | 42 | 190 | 20 | 168 | 3.73e-37 | 129 |
MS.gene90861.t1 | AT2G22290 | 36.508 | 189 | 117 | 2 | 42 | 230 | 20 | 205 | 7.77e-37 | 129 |
MS.gene90861.t1 | AT2G44610 | 37.368 | 190 | 115 | 3 | 42 | 230 | 20 | 206 | 2.01e-36 | 127 |
MS.gene90861.t1 | AT5G45130 | 35.789 | 190 | 110 | 4 | 43 | 231 | 22 | 200 | 3.95e-36 | 126 |
MS.gene90861.t1 | AT3G09910 | 48.148 | 135 | 67 | 3 | 63 | 195 | 44 | 177 | 5.15e-36 | 126 |
MS.gene90861.t1 | AT3G09910 | 48.148 | 135 | 67 | 3 | 63 | 195 | 44 | 177 | 5.15e-36 | 126 |
MS.gene90861.t1 | AT3G09910 | 48.148 | 135 | 67 | 3 | 63 | 195 | 44 | 177 | 5.15e-36 | 126 |
MS.gene90861.t1 | AT5G45130 | 35.789 | 190 | 110 | 4 | 43 | 231 | 30 | 208 | 1.10e-35 | 125 |
MS.gene90861.t1 | AT3G18820 | 42.038 | 157 | 85 | 3 | 42 | 192 | 19 | 175 | 5.27e-34 | 121 |
MS.gene90861.t1 | AT5G64990 | 40.541 | 148 | 87 | 1 | 42 | 189 | 18 | 164 | 1.31e-31 | 115 |
MS.gene90861.t1 | AT4G09720 | 38.462 | 182 | 96 | 4 | 42 | 207 | 19 | 200 | 2.70e-31 | 114 |
MS.gene90861.t1 | AT1G52280 | 40.764 | 157 | 87 | 3 | 42 | 192 | 19 | 175 | 3.97e-31 | 114 |
MS.gene90861.t1 | AT1G49300 | 37.017 | 181 | 99 | 5 | 42 | 207 | 19 | 199 | 1.93e-30 | 112 |
MS.gene90861.t1 | AT1G49300 | 37.017 | 181 | 99 | 5 | 42 | 207 | 19 | 199 | 1.93e-30 | 112 |
MS.gene90861.t1 | AT1G22740 | 39.744 | 156 | 88 | 3 | 42 | 191 | 19 | 174 | 6.35e-30 | 110 |
MS.gene90861.t1 | AT3G16100 | 40.127 | 157 | 88 | 2 | 42 | 192 | 19 | 175 | 9.95e-30 | 110 |
MS.gene90861.t1 | AT4G09720 | 37.968 | 187 | 95 | 5 | 42 | 207 | 19 | 205 | 3.00e-29 | 109 |
MS.gene90861.t1 | AT5G64990 | 38.710 | 155 | 87 | 2 | 42 | 189 | 18 | 171 | 7.07e-29 | 108 |
MS.gene90861.t1 | AT2G21880 | 37.179 | 156 | 92 | 2 | 42 | 191 | 20 | 175 | 8.63e-29 | 108 |
MS.gene90861.t1 | AT4G09720 | 39.634 | 164 | 83 | 4 | 60 | 207 | 3 | 166 | 3.12e-28 | 105 |
MS.gene90861.t1 | AT4G09720 | 39.634 | 164 | 83 | 4 | 60 | 207 | 3 | 166 | 3.12e-28 | 105 |
MS.gene90861.t1 | AT4G09720 | 39.634 | 164 | 83 | 4 | 60 | 207 | 3 | 166 | 3.12e-28 | 105 |
MS.gene90861.t1 | AT4G09720 | 35.233 | 193 | 98 | 4 | 42 | 207 | 19 | 211 | 5.44e-28 | 106 |
MS.gene90861.t1 | AT5G39620 | 37.107 | 159 | 88 | 3 | 42 | 191 | 16 | 171 | 1.96e-27 | 104 |
MS.gene90861.t1 | AT2G21880 | 38.028 | 142 | 82 | 2 | 56 | 191 | 9 | 150 | 1.07e-26 | 102 |
MS.gene90861.t1 | AT2G21880 | 38.028 | 142 | 82 | 2 | 56 | 191 | 9 | 150 | 1.07e-26 | 102 |
MS.gene90861.t1 | AT4G19640 | 37.838 | 111 | 69 | 0 | 43 | 153 | 22 | 132 | 4.19e-25 | 96.7 |
MS.gene90861.t1 | AT4G19640 | 37.838 | 111 | 69 | 0 | 43 | 153 | 22 | 132 | 2.18e-24 | 96.3 |
MS.gene90861.t1 | AT4G35020 | 35.897 | 156 | 87 | 6 | 42 | 186 | 17 | 170 | 4.94e-24 | 95.5 |
MS.gene90861.t1 | AT4G35020 | 35.897 | 156 | 87 | 6 | 42 | 186 | 17 | 170 | 4.94e-24 | 95.5 |
MS.gene90861.t1 | AT4G35020 | 35.897 | 156 | 87 | 6 | 42 | 186 | 17 | 170 | 4.94e-24 | 95.5 |
MS.gene90861.t1 | AT2G44690 | 32.051 | 156 | 93 | 5 | 42 | 186 | 29 | 182 | 1.57e-22 | 91.7 |
MS.gene90861.t1 | AT3G48040 | 32.692 | 156 | 92 | 5 | 42 | 186 | 19 | 172 | 1.74e-22 | 91.7 |
MS.gene90861.t1 | AT5G45970 | 30.769 | 156 | 95 | 5 | 42 | 186 | 17 | 170 | 3.11e-22 | 90.9 |
MS.gene90861.t1 | AT5G62880 | 31.548 | 168 | 102 | 5 | 42 | 198 | 19 | 184 | 3.24e-22 | 90.9 |
MS.gene90861.t1 | AT3G51300 | 32.692 | 156 | 92 | 6 | 42 | 186 | 17 | 170 | 9.05e-22 | 89.4 |
MS.gene90861.t1 | AT1G20090 | 33.974 | 156 | 90 | 6 | 42 | 186 | 16 | 169 | 1.19e-21 | 89.0 |
MS.gene90861.t1 | AT1G75840 | 33.333 | 156 | 91 | 6 | 42 | 186 | 17 | 170 | 1.47e-21 | 89.0 |
MS.gene90861.t1 | AT2G17800 | 32.692 | 156 | 92 | 6 | 42 | 186 | 17 | 170 | 4.23e-21 | 87.8 |
MS.gene90861.t1 | AT2G17800 | 32.692 | 156 | 92 | 6 | 42 | 186 | 17 | 170 | 4.23e-21 | 87.8 |
MS.gene90861.t1 | AT4G28950 | 31.169 | 154 | 95 | 5 | 42 | 186 | 17 | 168 | 1.93e-20 | 86.3 |
MS.gene90861.t1 | AT5G20010 | 27.895 | 190 | 128 | 5 | 43 | 228 | 25 | 209 | 3.13e-20 | 85.9 |
MS.gene90861.t1 | AT4G35950 | 32.051 | 156 | 93 | 6 | 42 | 186 | 17 | 170 | 3.43e-20 | 85.1 |
MS.gene90861.t1 | AT3G48040 | 32.432 | 148 | 87 | 5 | 42 | 178 | 19 | 164 | 7.39e-20 | 84.0 |
MS.gene90861.t1 | AT5G55080 | 31.126 | 151 | 100 | 3 | 43 | 193 | 25 | 171 | 4.22e-19 | 82.8 |
MS.gene90861.t1 | AT2G21880 | 32.051 | 156 | 92 | 3 | 42 | 191 | 20 | 167 | 4.23e-19 | 82.4 |
MS.gene90861.t1 | AT5G62880 | 32.026 | 153 | 91 | 5 | 42 | 183 | 19 | 169 | 4.96e-19 | 82.0 |
MS.gene90861.t1 | AT5G55190 | 26.842 | 190 | 128 | 5 | 43 | 225 | 25 | 210 | 6.20e-19 | 82.4 |
MS.gene90861.t1 | AT5G20020 | 29.139 | 151 | 103 | 3 | 43 | 193 | 25 | 171 | 1.97e-18 | 81.3 |
MS.gene90861.t1 | AT4G35020 | 37.143 | 105 | 63 | 3 | 42 | 145 | 17 | 119 | 3.51e-16 | 73.2 |
MS.gene90861.t1 | AT4G35020 | 37.143 | 105 | 63 | 3 | 42 | 145 | 17 | 119 | 3.51e-16 | 73.2 |
MS.gene90861.t1 | AT5G46025 | 35.294 | 102 | 64 | 2 | 93 | 193 | 6 | 106 | 3.17e-15 | 69.7 |
MS.gene90861.t1 | AT3G51290 | 30.769 | 143 | 86 | 6 | 60 | 191 | 636 | 776 | 5.21e-13 | 68.2 |
Find 57 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACGCATTAAGTTGCAAATT+TGG | 0.124150 | 1.4:+87451634 | MS.gene90861:CDS |
CTTCTTTCTGTTCAGATATT+AGG | 0.164910 | 1.4:+87452188 | MS.gene90861:intron |
AACGAGGTTGGTGGGTCTTT+TGG | 0.275325 | 1.4:-87450812 | None:intergenic |
GTTGGTTAATCTTGATACTC+TGG | 0.323408 | 1.4:-87452966 | None:intergenic |
CATTGGCTGCCTGGTCTTGT+TGG | 0.332079 | 1.4:-87452984 | None:intergenic |
ACGCATTAAGTTGCAAATTT+GGG | 0.344668 | 1.4:+87451635 | MS.gene90861:CDS |
AATCGGCTTGCTGCGGTTAA+CGG | 0.352175 | 1.4:+87453025 | MS.gene90861:CDS |
TGTGGGAAACAAGGCTGATA+TGG | 0.357144 | 1.4:+87452264 | MS.gene90861:CDS |
TTGGTTAATCTTGATACTCT+GGG | 0.358486 | 1.4:-87452965 | None:intergenic |
TGGAGCCATGGGTATCTTGC+TGG | 0.359100 | 1.4:+87451860 | MS.gene90861:CDS |
CCTGACCACCATTGGCTGCC+TGG | 0.367231 | 1.4:-87452993 | None:intergenic |
TGTGATATTGAGAAATTTGA+AGG | 0.377104 | 1.4:-87450688 | None:intergenic |
ATCAGCAAGAGCTTGACCTT+TGG | 0.383335 | 1.4:-87452515 | None:intergenic |
CAAGCTCTTGCTGATGAGTA+TGG | 0.383437 | 1.4:+87452523 | MS.gene90861:CDS |
ATAAGAACCATTGAACTTGA+TGG | 0.385351 | 1.4:+87451609 | MS.gene90861:CDS |
TCTGTTCAGATATTAGGAAT+TGG | 0.400880 | 1.4:+87452194 | MS.gene90861:intron |
CTGATATGGATGAAAGTAAA+CGG | 0.401383 | 1.4:+87452278 | MS.gene90861:CDS |
CCAGGCAGCCAATGGTGGTC+AGG | 0.405180 | 1.4:+87452993 | MS.gene90861:CDS |
AATTTGGGACACAGCTGGTC+AGG | 0.423871 | 1.4:+87451650 | MS.gene90861:CDS |
CCCAATGGTGGTGATAAAAC+TGG | 0.440887 | 1.4:-87451111 | None:intergenic |
AGCAAGAGCTTGACCTTTGG+AGG | 0.448218 | 1.4:-87452512 | None:intergenic |
GCGTTTGCCATCAAGTTCAA+TGG | 0.456159 | 1.4:-87451616 | None:intergenic |
AATGTAAACAAGATACTTGT+GGG | 0.475156 | 1.4:+87452247 | MS.gene90861:CDS |
AGCTTATTATCGTGGAGCCA+TGG | 0.483620 | 1.4:+87451848 | MS.gene90861:intron |
AACCATGGGTGCCACGAGAA+TGG | 0.489589 | 1.4:+87450648 | None:intergenic |
TGATATGGATGAAAGTAAAC+GGG | 0.500423 | 1.4:+87452279 | MS.gene90861:CDS |
ACATACCTGTAGTAATAGTT+CGG | 0.505948 | 1.4:-87451680 | None:intergenic |
CAAGATACTTGTGGGAAACA+AGG | 0.517167 | 1.4:+87452255 | MS.gene90861:CDS |
TTGTGCAGCCTGACCACCAT+TGG | 0.522584 | 1.4:-87453001 | None:intergenic |
TTGCAAATTTGGGACACAGC+TGG | 0.522901 | 1.4:+87451645 | MS.gene90861:CDS |
TGCCATTCTCGTGGCACCCA+TGG | 0.531326 | 1.4:-87450650 | None:intergenic |
CACGAGAATGGCAGTTGCCG+TGG | 0.533809 | 1.4:+87450660 | MS.gene90861:CDS |
GCTTATTATCGTGGAGCCAT+GGG | 0.550907 | 1.4:+87451849 | MS.gene90861:intron |
CAATGTAAACAAGATACTTG+TGG | 0.552374 | 1.4:+87452246 | MS.gene90861:CDS |
TAAATCCTCAACGAGGTTGG+TGG | 0.555489 | 1.4:-87450821 | None:intergenic |
TCTGTTGCAGCTTATTATCG+TGG | 0.558222 | 1.4:+87451840 | MS.gene90861:intron |
AGATTCCGAACTATTACTAC+AGG | 0.559019 | 1.4:+87451675 | MS.gene90861:CDS |
AGAGCTTGACCTTTGGAGGT+AGG | 0.570506 | 1.4:-87452508 | None:intergenic |
CAAGATTAACCAACAAGACC+AGG | 0.573376 | 1.4:+87452975 | MS.gene90861:CDS |
TTGTAAATCCTCAACGAGGT+TGG | 0.597859 | 1.4:-87450824 | None:intergenic |
CACGGCAACTGCCATTCTCG+TGG | 0.602170 | 1.4:-87450659 | None:intergenic |
GAAATTTGAAGGAAAAGCCA+CGG | 0.609878 | 1.4:-87450677 | None:intergenic |
TCAAATTTCTCAATATCACA+AGG | 0.611083 | 1.4:+87450691 | MS.gene90861:CDS |
CAACAAGACCAGGCAGCCAA+TGG | 0.612044 | 1.4:+87452985 | MS.gene90861:CDS |
AAATCCTCAACGAGGTTGGT+GGG | 0.614857 | 1.4:-87450820 | None:intergenic |
TACAAATACTAACCCAATGG+TGG | 0.615885 | 1.4:-87451123 | None:intergenic |
AGACACTGTTTCTAGTACTG+AGG | 0.616300 | 1.4:+87452716 | MS.gene90861:CDS |
TAGGCTGTACCTACCTCCAA+AGG | 0.624971 | 1.4:+87452499 | MS.gene90861:intron |
CTCAACTATTTGTAGGTGTG+GGG | 0.631205 | 1.4:+87451045 | MS.gene90861:intron |
ACCTCGTTGAGGATTTACAA+TGG | 0.639599 | 1.4:+87450827 | MS.gene90861:CDS |
TAGCAAGAGATATCAAGCAA+AGG | 0.641515 | 1.4:+87452688 | MS.gene90861:CDS |
GGTGATAAAACTGGTTGTGA+AGG | 0.649377 | 1.4:-87451102 | None:intergenic |
TGGTTAATCTTGATACTCTG+GGG | 0.656186 | 1.4:-87452964 | None:intergenic |
AAGACCCACCAACCTCGTTG+AGG | 0.664073 | 1.4:+87450816 | MS.gene90861:CDS |
CAAGACCAGGCAGCCAATGG+TGG | 0.679968 | 1.4:+87452988 | MS.gene90861:CDS |
GTAAACCAGCAAGATACCCA+TGG | 0.687226 | 1.4:-87451865 | None:intergenic |
TCCATTGTAAATCCTCAACG+AGG | 0.758585 | 1.4:-87450828 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATAGATATATGTC+TGG | - | chr1.4:87451540-87451559 | None:intergenic | 15.0% |
!! | AATCTTATTATAAAAATGCA+TGG | + | chr1.4:87451570-87451589 | MS.gene90861:intron | 15.0% |
!! | AAGAAAAAGAAATAATAGAG+AGG | - | chr1.4:87452819-87452838 | None:intergenic | 20.0% |
!! | CATAAGAATAAGAAAAATAG+CGG | - | chr1.4:87450761-87450780 | None:intergenic | 20.0% |
!! | TCTTATGGAATGAAAATTTA+GGG | + | chr1.4:87450774-87450793 | MS.gene90861:intron | 20.0% |
!! | TTCTTATGGAATGAAAATTT+AGG | + | chr1.4:87450773-87450792 | MS.gene90861:intron | 20.0% |
!!! | AATGATGATATTTTCTTCTA+TGG | + | chr1.4:87452933-87452952 | MS.gene90861:intron | 20.0% |
!!! | GAAAAGTACGTAAAAATAAA+AGG | - | chr1.4:87451022-87451041 | None:intergenic | 20.0% |
! | AATGTAAACAAGATACTTGT+GGG | + | chr1.4:87452247-87452266 | MS.gene90861:CDS | 25.0% |
! | ATATATCAGACAAACTCTAT+AGG | - | chr1.4:87451424-87451443 | None:intergenic | 25.0% |
! | ATGTCAAGTAAAAGTAGAAA+GGG | - | chr1.4:87452321-87452340 | None:intergenic | 25.0% |
! | ATTAACTCAAACAAGATACA+AGG | - | chr1.4:87450973-87450992 | None:intergenic | 25.0% |
! | ATTTAGAAATACAGCAAACT+TGG | + | chr1.4:87451397-87451416 | MS.gene90861:intron | 25.0% |
! | CTAGTCCAAAATTATGAAAT+TGG | - | chr1.4:87450870-87450889 | None:intergenic | 25.0% |
! | TACTTATGTGTATAAGATGA+AGG | - | chr1.4:87451506-87451525 | None:intergenic | 25.0% |
! | TATTACAAATACTAACCCAA+TGG | - | chr1.4:87451129-87451148 | None:intergenic | 25.0% |
! | TCAAATTTCTCAATATCACA+AGG | + | chr1.4:87450691-87450710 | MS.gene90861:CDS | 25.0% |
! | TCCAAAATTATGAAATTGGT+AGG | - | chr1.4:87450866-87450885 | None:intergenic | 25.0% |
! | TGTATAAGATGAAGGAAATT+CGG | - | chr1.4:87451498-87451517 | None:intergenic | 25.0% |
! | TGTGATATTGAGAAATTTGA+AGG | - | chr1.4:87450691-87450710 | None:intergenic | 25.0% |
! | TTAGCAGAATAAGTAATTGT+TGG | - | chr1.4:87452859-87452878 | None:intergenic | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | + | chr1.4:87451208-87451227 | MS.gene90861:intron | 25.0% |
! | TTTAAGCAGAAATAAGATCA+GGG | - | chr1.4:87451931-87451950 | None:intergenic | 25.0% |
! | TTTAGAAATACAGCAAACTT+GGG | + | chr1.4:87451398-87451417 | MS.gene90861:intron | 25.0% |
! | TTTCCTTCAATACAAACATA+AGG | + | chr1.4:87452462-87452481 | MS.gene90861:intron | 25.0% |
!! | ACCTACCAATTTCATAATTT+TGG | + | chr1.4:87450862-87450881 | MS.gene90861:intron | 25.0% |
!! | TCAATTGATAGTTGTTCATT+TGG | + | chr1.4:87451733-87451752 | MS.gene90861:intron | 25.0% |
!! | TGATATTTGTACATCCATTT+TGG | - | chr1.4:87451305-87451324 | None:intergenic | 25.0% |
!!! | CATAGTAGAATTTTGACTAA+CGG | - | chr1.4:87450727-87450746 | None:intergenic | 25.0% |
!!! | CGCTATTTTTCTTATTCTTA+TGG | + | chr1.4:87450759-87450778 | MS.gene90861:intron | 25.0% |
AAAAACAAACATGAATGTGG+AGG | + | chr1.4:87452650-87452669 | MS.gene90861:CDS | 30.0% | |
AAAACAATGGAGAGAGAAAA+AGG | + | chr1.4:87451221-87451240 | MS.gene90861:intron | 30.0% | |
AAACAGATCAATTGATTGTC+TGG | - | chr1.4:87452100-87452119 | None:intergenic | 30.0% | |
ACACCTTATGTTTGTATTGA+AGG | - | chr1.4:87452468-87452487 | None:intergenic | 30.0% | |
ACATACCTGTAGTAATAGTT+CGG | - | chr1.4:87451683-87451702 | None:intergenic | 30.0% | |
AGGACTACAAAAATGAAGAT+AGG | - | chr1.4:87452759-87452778 | None:intergenic | 30.0% | |
ATAAGAACCATTGAACTTGA+TGG | + | chr1.4:87451609-87451628 | MS.gene90861:CDS | 30.0% | |
CAATGTAAACAAGATACTTG+TGG | + | chr1.4:87452246-87452265 | MS.gene90861:CDS | 30.0% | |
CACTAATGTCTGAAAATTGT+AGG | + | chr1.4:87451979-87451998 | MS.gene90861:intron | 30.0% | |
CTGATATGGATGAAAGTAAA+CGG | + | chr1.4:87452278-87452297 | MS.gene90861:CDS | 30.0% | |
CTTCTTTCTGTTCAGATATT+AGG | + | chr1.4:87452188-87452207 | MS.gene90861:intron | 30.0% | |
CTTTAAGCAGAAATAAGATC+AGG | - | chr1.4:87451932-87451951 | None:intergenic | 30.0% | |
GATGTCAAGTAAAAGTAGAA+AGG | - | chr1.4:87452322-87452341 | None:intergenic | 30.0% | |
GTACAAAAGTTGTACCAAAA+TGG | + | chr1.4:87451288-87451307 | MS.gene90861:intron | 30.0% | |
GTCAAAATTCTACTATGCTA+TGG | + | chr1.4:87450730-87450749 | MS.gene90861:intron | 30.0% | |
TCTGTTCAGATATTAGGAAT+TGG | + | chr1.4:87452194-87452213 | MS.gene90861:intron | 30.0% | |
TGATATGGATGAAAGTAAAC+GGG | + | chr1.4:87452279-87452298 | MS.gene90861:CDS | 30.0% | |
TGCAAAAACAAACATGAATG+TGG | + | chr1.4:87452647-87452666 | MS.gene90861:CDS | 30.0% | |
TTGGTTAATCTTGATACTCT+GGG | - | chr1.4:87452968-87452987 | None:intergenic | 30.0% | |
TTTCTGACTCAACTATTTGT+AGG | + | chr1.4:87451038-87451057 | MS.gene90861:intron | 30.0% | |
! | AACGCATTAAGTTGCAAATT+TGG | + | chr1.4:87451634-87451653 | MS.gene90861:CDS | 30.0% |
! | ACGCATTAAGTTGCAAATTT+GGG | + | chr1.4:87451635-87451654 | MS.gene90861:CDS | 30.0% |
! | GATGATATTTTCTTCTATGG+TGG | + | chr1.4:87452936-87452955 | MS.gene90861:intron | 30.0% |
! | TTTGTTGCTTCTTTCTTGTT+TGG | + | chr1.4:87452900-87452919 | MS.gene90861:intron | 30.0% |
!! | AACTACTTTTGTACTACTTC+TGG | + | chr1.4:87451167-87451186 | MS.gene90861:intron | 30.0% |
!! | ACTACTTTTGTACTACTTCT+GGG | + | chr1.4:87451168-87451187 | MS.gene90861:intron | 30.0% |
AAAAGGAACAAGAATGGATG+GGG | - | chr1.4:87452043-87452062 | None:intergenic | 35.0% | |
AAATAAGATCAGGGAAAGGA+GGG | - | chr1.4:87451922-87451941 | None:intergenic | 35.0% | |
AAGATAGGAAAGAGTCAACA+AGG | - | chr1.4:87452744-87452763 | None:intergenic | 35.0% | |
AAGGCAAGCAGAATAAACAA+TGG | - | chr1.4:87452155-87452174 | None:intergenic | 35.0% | |
ACTCAACTATTTGTAGGTGT+GGG | + | chr1.4:87451044-87451063 | MS.gene90861:intron | 35.0% | |
ACTGGGAACTCGTAATTAAT+AGG | + | chr1.4:87451764-87451783 | MS.gene90861:intron | 35.0% | |
ACTTGACATCTTAGCTGTTT+GGG | + | chr1.4:87452332-87452351 | MS.gene90861:intron | 35.0% | |
AGATTCCGAACTATTACTAC+AGG | + | chr1.4:87451675-87451694 | MS.gene90861:CDS | 35.0% | |
ATCCGTAAGTAAATGTGGTA+TGG | - | chr1.4:87452405-87452424 | None:intergenic | 35.0% | |
CAAAAGGAACAAGAATGGAT+GGG | - | chr1.4:87452044-87452063 | None:intergenic | 35.0% | |
CCAATAAGAAGAGAACAACA+AGG | - | chr1.4:87451198-87451217 | None:intergenic | 35.0% | |
CTATTTGTGCCAATCACAAT+TGG | + | chr1.4:87450926-87450945 | MS.gene90861:intron | 35.0% | |
GAAATAATAGAGAGGAGAGA+AGG | - | chr1.4:87452811-87452830 | None:intergenic | 35.0% | |
GAAATTTGAAGGAAAAGCCA+CGG | - | chr1.4:87450680-87450699 | None:intergenic | 35.0% | |
GTTGGTTAATCTTGATACTC+TGG | - | chr1.4:87452969-87452988 | None:intergenic | 35.0% | |
TACAAATACTAACCCAATGG+TGG | - | chr1.4:87451126-87451145 | None:intergenic | 35.0% | |
TACTTGACATCTTAGCTGTT+TGG | + | chr1.4:87452331-87452350 | MS.gene90861:intron | 35.0% | |
TAGCAAGAGATATCAAGCAA+AGG | + | chr1.4:87452688-87452707 | MS.gene90861:CDS | 35.0% | |
TCAAAAGGAACAAGAATGGA+TGG | - | chr1.4:87452045-87452064 | None:intergenic | 35.0% | |
TCCGTAAGTAAATGTGGTAT+GGG | - | chr1.4:87452404-87452423 | None:intergenic | 35.0% | |
TGGTTAATCTTGATACTCTG+GGG | - | chr1.4:87452967-87452986 | None:intergenic | 35.0% | |
TGTAAACACTTTCTCATCGT+TGG | + | chr1.4:87451470-87451489 | MS.gene90861:intron | 35.0% | |
TTAAGACATGTTCCTTCAAC+AGG | - | chr1.4:87451810-87451829 | None:intergenic | 35.0% | |
! | ATTTTTGTAGTCCTCAGAAG+TGG | + | chr1.4:87452765-87452784 | MS.gene90861:intron | 35.0% |
!! | CCTTGTTGTTCTCTTCTTAT+TGG | + | chr1.4:87451195-87451214 | MS.gene90861:intron | 35.0% |
!! | TAAGGTGTTCGTTTTTCTCT+AGG | + | chr1.4:87452480-87452499 | MS.gene90861:intron | 35.0% |
!!! | TTGCTTTTGAGGTTTTCTGA+TGG | + | chr1.4:87451077-87451096 | MS.gene90861:CDS | 35.0% |
AATTACGAGTTCCCAGTGTA+TGG | - | chr1.4:87451761-87451780 | None:intergenic | 40.0% | |
ACCTCGTTGAGGATTTACAA+TGG | + | chr1.4:87450827-87450846 | MS.gene90861:CDS | 40.0% | |
ACTAGATCTCATATCACAGC+TGG | + | chr1.4:87450885-87450904 | MS.gene90861:intron | 40.0% | |
ATGTTCCTTCAACAGGAATG+TGG | - | chr1.4:87451803-87451822 | None:intergenic | 40.0% | |
ATTACGAGTTCCCAGTGTAT+GGG | - | chr1.4:87451760-87451779 | None:intergenic | 40.0% | |
CAAGATACTTGTGGGAAACA+AGG | + | chr1.4:87452255-87452274 | MS.gene90861:CDS | 40.0% | |
CAAGATTAACCAACAAGACC+AGG | + | chr1.4:87452975-87452994 | MS.gene90861:CDS | 40.0% | |
CTCAACTATTTGTAGGTGTG+GGG | + | chr1.4:87451045-87451064 | MS.gene90861:intron | 40.0% | |
CTCAGATCCGTAAGTAAATG+TGG | - | chr1.4:87452410-87452429 | None:intergenic | 40.0% | |
CTTGACATCTTAGCTGTTTG+GGG | + | chr1.4:87452333-87452352 | MS.gene90861:intron | 40.0% | |
GAAATAAGATCAGGGAAAGG+AGG | - | chr1.4:87451923-87451942 | None:intergenic | 40.0% | |
GAATGGATGGGGAAATAAGA+AGG | - | chr1.4:87452032-87452051 | None:intergenic | 40.0% | |
GACTCAACTATTTGTAGGTG+TGG | + | chr1.4:87451043-87451062 | MS.gene90861:intron | 40.0% | |
GAGGTCAAAAGGAACAAGAA+TGG | - | chr1.4:87452049-87452068 | None:intergenic | 40.0% | |
GCAGAAATAAGATCAGGGAA+AGG | - | chr1.4:87451926-87451945 | None:intergenic | 40.0% | |
GCCCATACCACATTTACTTA+CGG | + | chr1.4:87452400-87452419 | MS.gene90861:intron | 40.0% | |
GGTGATAAAACTGGTTGTGA+AGG | - | chr1.4:87451105-87451124 | None:intergenic | 40.0% | |
TCCATTGTAAATCCTCAACG+AGG | - | chr1.4:87450831-87450850 | None:intergenic | 40.0% | |
TCTGTTGCAGCTTATTATCG+TGG | + | chr1.4:87451840-87451859 | MS.gene90861:intron | 40.0% | |
TGCATAAACTTCCACTTCTG+AGG | - | chr1.4:87452779-87452798 | None:intergenic | 40.0% | |
TGTTCCTTCAACAGGAATGT+GGG | - | chr1.4:87451802-87451821 | None:intergenic | 40.0% | |
TTCATTTGGTCCCATACACT+GGG | + | chr1.4:87451747-87451766 | MS.gene90861:intron | 40.0% | |
TTGTAAATCCTCAACGAGGT+TGG | - | chr1.4:87450827-87450846 | None:intergenic | 40.0% | |
TTTACCCACATTCCTGTTGA+AGG | + | chr1.4:87451795-87451814 | MS.gene90861:intron | 40.0% | |
! | AAGAAGCGTGCTACATCAAA+AGG | - | chr1.4:87452174-87452193 | None:intergenic | 40.0% |
! | CTGGCTAGTTAAATGTGAGT+CGG | - | chr1.4:87452081-87452100 | None:intergenic | 40.0% |
!! | ACCAGTTTTATCACCACCAT+TGG | + | chr1.4:87451110-87451129 | MS.gene90861:CDS | 40.0% |
!! | AGACACTGTTTCTAGTACTG+AGG | + | chr1.4:87452716-87452735 | MS.gene90861:CDS | 40.0% |
!! | CCAGTTTTATCACCACCATT+GGG | + | chr1.4:87451111-87451130 | MS.gene90861:CDS | 40.0% |
!! | GGAAGAGTTGTTTGCTTTTG+AGG | + | chr1.4:87451066-87451085 | MS.gene90861:CDS | 40.0% |
!! | GGAGAGTATTAGAGGTCAAA+AGG | - | chr1.4:87452060-87452079 | None:intergenic | 40.0% |
ACAAGGCCATCAAATTGCAG+CGG | - | chr1.4:87450956-87450975 | None:intergenic | 45.0% | |
AGCGGTGAACCAATTGTGAT+TGG | - | chr1.4:87450938-87450957 | None:intergenic | 45.0% | |
AGCTTATTATCGTGGAGCCA+TGG | + | chr1.4:87451848-87451867 | MS.gene90861:intron | 45.0% | |
ATCAGCAAGAGCTTGACCTT+TGG | - | chr1.4:87452518-87452537 | None:intergenic | 45.0% | |
CAAGCTCTTGCTGATGAGTA+TGG | + | chr1.4:87452523-87452542 | MS.gene90861:CDS | 45.0% | |
GCGTTTGCCATCAAGTTCAA+TGG | - | chr1.4:87451619-87451638 | None:intergenic | 45.0% | |
GCTTATTATCGTGGAGCCAT+GGG | + | chr1.4:87451849-87451868 | MS.gene90861:intron | 45.0% | |
GTAAACCAGCAAGATACCCA+TGG | - | chr1.4:87451868-87451887 | None:intergenic | 45.0% | |
GTTCATTTGGTCCCATACAC+TGG | + | chr1.4:87451746-87451765 | MS.gene90861:intron | 45.0% | |
TAAATCCTCAACGAGGTTGG+TGG | - | chr1.4:87450824-87450843 | None:intergenic | 45.0% | |
TGGTCAGGCTGCACAAAAAT+CGG | + | chr1.4:87453008-87453027 | MS.gene90861:CDS | 45.0% | |
TGTGGGAAACAAGGCTGATA+TGG | + | chr1.4:87452264-87452283 | MS.gene90861:CDS | 45.0% | |
! | AAATCCTCAACGAGGTTGGT+GGG | - | chr1.4:87450823-87450842 | None:intergenic | 45.0% |
! | CCCAATGGTGGTGATAAAAC+TGG | - | chr1.4:87451114-87451133 | None:intergenic | 45.0% |
! | TCTTAGCTGTTTGGGGTATG+AGG | + | chr1.4:87452340-87452359 | MS.gene90861:intron | 45.0% |
! | TTGCAAATTTGGGACACAGC+TGG | + | chr1.4:87451645-87451664 | MS.gene90861:CDS | 45.0% |
!! | TGTGAGTCGGAGAGTATTAG+AGG | - | chr1.4:87452068-87452087 | None:intergenic | 45.0% |
AAACGGGTATGTCCATCTCG+AGG | + | chr1.4:87452295-87452314 | MS.gene90861:intron | 50.0% | |
AAGTAGAAAGGGCCTCGAGA+TGG | - | chr1.4:87452310-87452329 | None:intergenic | 50.0% | |
AGCAAGAGCTTGACCTTTGG+AGG | - | chr1.4:87452515-87452534 | None:intergenic | 50.0% | |
GGTTCACCGCTGCAATTTGA+TGG | + | chr1.4:87450947-87450966 | MS.gene90861:intron | 50.0% | |
TAGGCTGTACCTACCTCCAA+AGG | + | chr1.4:87452499-87452518 | MS.gene90861:intron | 50.0% | |
! | AATTTGGGACACAGCTGGTC+AGG | + | chr1.4:87451650-87451669 | MS.gene90861:CDS | 50.0% |
! | AGAGCTTGACCTTTGGAGGT+AGG | - | chr1.4:87452511-87452530 | None:intergenic | 50.0% |
!! | GCACAAAAATCGGCTTGCTG+CGG | + | chr1.4:87453018-87453037 | MS.gene90861:CDS | 50.0% |
!!! | AACGAGGTTGGTGGGTCTTT+TGG | - | chr1.4:87450815-87450834 | None:intergenic | 50.0% |
AAGACCCACCAACCTCGTTG+AGG | + | chr1.4:87450816-87450835 | MS.gene90861:CDS | 55.0% | |
CAACAAGACCAGGCAGCCAA+TGG | + | chr1.4:87452985-87453004 | MS.gene90861:CDS | 55.0% | |
TGGAGCCATGGGTATCTTGC+TGG | + | chr1.4:87451860-87451879 | MS.gene90861:CDS | 55.0% | |
TTGTGCAGCCTGACCACCAT+TGG | - | chr1.4:87453004-87453023 | None:intergenic | 55.0% | |
!! | CATTGGCTGCCTGGTCTTGT+TGG | - | chr1.4:87452987-87453006 | None:intergenic | 55.0% |
!!! | GGTTGGTGGGTCTTTTGGCA+TGG | - | chr1.4:87450810-87450829 | None:intergenic | 55.0% |
CAAGACCAGGCAGCCAATGG+TGG | + | chr1.4:87452988-87453007 | MS.gene90861:CDS | 60.0% | |
CACGAGAATGGCAGTTGCCG+TGG | + | chr1.4:87450660-87450679 | MS.gene90861:CDS | 60.0% | |
CACGGCAACTGCCATTCTCG+TGG | - | chr1.4:87450662-87450681 | None:intergenic | 60.0% | |
CCAGGCAGCCAATGGTGGTC+AGG | + | chr1.4:87452993-87453012 | MS.gene90861:CDS | 65.0% | |
! | CCTGACCACCATTGGCTGCC+TGG | - | chr1.4:87452996-87453015 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 87450652 | 87453044 | 87450652 | ID=MS.gene90861 |
chr1.4 | mRNA | 87450652 | 87453044 | 87450652 | ID=MS.gene90861.t1;Parent=MS.gene90861 |
chr1.4 | exon | 87450652 | 87450712 | 87450652 | ID=MS.gene90861.t1.exon1;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87450652 | 87450712 | 87450652 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87450795 | 87450854 | 87450795 | ID=MS.gene90861.t1.exon2;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87450795 | 87450854 | 87450795 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87451060 | 87451132 | 87451060 | ID=MS.gene90861.t1.exon3;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87451060 | 87451132 | 87451060 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87451596 | 87451696 | 87451596 | ID=MS.gene90861.t1.exon4;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87451596 | 87451696 | 87451596 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87451850 | 87451915 | 87451850 | ID=MS.gene90861.t1.exon5;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87451850 | 87451915 | 87451850 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87452203 | 87452300 | 87452203 | ID=MS.gene90861.t1.exon6;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87452203 | 87452300 | 87452203 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87452502 | 87452564 | 87452502 | ID=MS.gene90861.t1.exon7;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87452502 | 87452564 | 87452502 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87452645 | 87452737 | 87452645 | ID=MS.gene90861.t1.exon8;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87452645 | 87452737 | 87452645 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
chr1.4 | exon | 87452964 | 87453044 | 87452964 | ID=MS.gene90861.t1.exon9;Parent=MS.gene90861.t1 |
chr1.4 | CDS | 87452964 | 87453044 | 87452964 | ID=cds.MS.gene90861.t1;Parent=MS.gene90861.t1 |
Gene Sequence |
Protein sequence |