Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99876.t1 | XP_003601037.1 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 1.50E-221 | 778.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99876.t1 | Q42967 | 81.0 | 385 | 69 | 1 | 9 | 389 | 7 | 391 | 1.2e-182 | 640.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99876.t1 | B7FIJ3 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 1.1e-221 | 778.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene99876 | 0.819798 | 9.61E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene99876 | 0.822538 | 2.25E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene99876 | 0.812057 | 5.13E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene99876 | 0.857926 | 1.17E-62 | -1.69E-46 |
| MS.gene049828 | MS.gene99876 | 0.852954 | 3.29E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene99876 | 0.837135 | 6.22E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene99876 | 0.836801 | 7.56E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene99876 | 0.834308 | 3.23E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene99876 | 0.879249 | 1.45E-69 | -1.69E-46 |
| MS.gene050770 | MS.gene99876 | 0.882925 | 6.92E-71 | -1.69E-46 |
| MS.gene051228 | MS.gene99876 | 0.872405 | 3.26E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene99876 | 0.839885 | 1.21E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene99876 | 0.801071 | 1.07E-48 | -1.69E-46 |
| MS.gene051949 | MS.gene99876 | 0.817163 | 3.80E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene99876 | 0.848286 | 6.75E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene99876 | 0.880992 | 3.47E-70 | -1.69E-46 |
| MS.gene052326 | MS.gene99876 | 0.810351 | 1.20E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene99876 | 0.855159 | 7.61E-62 | -1.69E-46 |
| MS.gene052870 | MS.gene99876 | 0.809702 | 1.66E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene99876 | 0.881777 | 1.81E-70 | -1.69E-46 |
| MS.gene053104 | MS.gene99876 | 0.806163 | 9.40E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene99876 | 0.839546 | 1.48E-57 | -1.69E-46 |
| MS.gene053384 | MS.gene99876 | 0.831757 | 1.39E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene99876 | 0.859416 | 4.20E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene99876 | 0.841397 | 4.87E-58 | -1.69E-46 |
| MS.gene054802 | MS.gene99876 | 0.827389 | 1.61E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene99876 | 0.828729 | 7.65E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene99876 | 0.832396 | 9.68E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene99876 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene99876 | 0.861966 | 7.08E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene99876 | 0.801336 | 9.45E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene99876 | 0.872433 | 3.19E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene99876 | 0.858295 | 9.09E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene99876 | 0.834613 | 2.71E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene99876 | 0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene99876 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene99876 | 0.848808 | 4.84E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene99876 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene99876 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene99876 | 0.806573 | 7.71E-50 | -1.69E-46 |
| MS.gene056611 | MS.gene99876 | 0.823777 | 1.15E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene99876 | 0.822307 | 2.54E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene99876 | 0.867893 | 9.78E-66 | -1.69E-46 |
| MS.gene057246 | MS.gene99876 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene99876 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene99876 | 0.811743 | 6.01E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene99876 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene99876 | 0.8337 | 4.59E-56 | -1.69E-46 |
| MS.gene05806 | MS.gene99876 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene99876 | 0.808366 | 3.21E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene99876 | 0.825534 | 4.45E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene99876 | 0.840505 | 8.35E-58 | -1.69E-46 |
| MS.gene058903 | MS.gene99876 | 0.818822 | 1.60E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene99876 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene99876 | 0.838336 | 3.06E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene99876 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene99876 | 0.820337 | 7.23E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene99876 | 0.83424 | 3.36E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene99876 | 0.843176 | 1.65E-58 | -1.69E-46 |
| MS.gene060356 | MS.gene99876 | 0.80619 | 9.28E-50 | -1.69E-46 |
| MS.gene060799 | MS.gene99876 | 0.81201 | 5.26E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene99876 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene99876 | 0.832156 | 1.11E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene99876 | 0.814048 | 1.88E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene99876 | 0.808098 | 3.66E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene99876 | 0.858136 | 1.01E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99876 | MS.gene060588 | PPI |
| MS.gene026855 | MS.gene99876 | PPI |
| MS.gene060193 | MS.gene99876 | PPI |
| MS.gene63745 | MS.gene99876 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99876.t1 | MTR_3g072330 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 789 |
| MS.gene99876.t1 | MTR_2g076340 | 55.556 | 342 | 151 | 1 | 48 | 389 | 55 | 395 | 4.29e-137 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99876.t1 | AT2G40490 | 78.191 | 376 | 79 | 2 | 15 | 389 | 21 | 394 | 0.0 | 612 |
| MS.gene99876.t1 | AT3G14930 | 53.026 | 347 | 162 | 1 | 43 | 389 | 54 | 399 | 9.99e-139 | 402 |
| MS.gene99876.t1 | AT3G14930 | 53.026 | 347 | 162 | 1 | 43 | 389 | 54 | 399 | 9.99e-139 | 402 |
| MS.gene99876.t1 | AT3G14930 | 54.180 | 323 | 147 | 1 | 67 | 389 | 1 | 322 | 7.13e-130 | 377 |
Find 105 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCTTACACCACTTTC+TGG | 0.157805 | 3.2:-65173852 | MS.gene99876:CDS |
| ATTCCATTTGACATTGTAAA+AGG | 0.206118 | 3.2:-65173822 | MS.gene99876:CDS |
| AATGGATTTGAATGGGTAAA+AGG | 0.250908 | 3.2:+65175013 | None:intergenic |
| ATCTGGATGGCTTTGCTTTA+CGG | 0.271951 | 3.2:+65171253 | None:intergenic |
| ACTTGGCCTGCGGAGTGAAC+TGG | 0.306505 | 3.2:+65173777 | None:intergenic |
| TCCATTCAATGTTCTCTTCC+AGG | 0.315235 | 3.2:-65174996 | MS.gene99876:intron |
| TCAATAATTTGCTTCAAGTA+TGG | 0.348715 | 3.2:+65171278 | None:intergenic |
| TCGATATGGCTGACGGTAGA+AGG | 0.349057 | 3.2:-65171139 | MS.gene99876:CDS |
| AACTTAGTATTTGATTCCTT+TGG | 0.358951 | 3.2:+65170926 | None:intergenic |
| CTTGGATTGGACGGTCGATA+TGG | 0.369614 | 3.2:-65171153 | MS.gene99876:CDS |
| GTTGATCCTGGTGTTCTGTT+TGG | 0.376386 | 3.2:-65171083 | MS.gene99876:CDS |
| TTTCTCTAAAATAAAGAGAT+TGG | 0.380766 | 3.2:-65172080 | MS.gene99876:CDS |
| ATCCTCTATGCAAGTGGATC+AGG | 0.396912 | 3.2:-65171221 | MS.gene99876:CDS |
| CGATGCCATGACCAAGGTTC+AGG | 0.397386 | 3.2:+65170994 | None:intergenic |
| TAGAGGATAAGAGGGAGATC+TGG | 0.404046 | 3.2:+65171236 | None:intergenic |
| GAACATTGAATGGATTTGAA+TGG | 0.412640 | 3.2:+65175005 | None:intergenic |
| CCACTTGCATAGAGGATAAG+AGG | 0.422510 | 3.2:+65171227 | None:intergenic |
| CTGTACAGATATTCGATTCA+TGG | 0.424244 | 3.2:-65171343 | MS.gene99876:CDS |
| AACATTGAATGGATTTGAAT+GGG | 0.425887 | 3.2:+65175006 | None:intergenic |
| ACATACGACGCCAGGGTAAA+CGG | 0.433300 | 3.2:+65172127 | None:intergenic |
| GATAATAAATCTGCAGTCCT+TGG | 0.434879 | 3.2:-65172163 | MS.gene99876:CDS |
| TTACCTTGGATAGCTACATT+TGG | 0.446082 | 3.2:+65171107 | None:intergenic |
| GAGAGTTATATTACCCCATC+AGG | 0.452559 | 3.2:+65174005 | None:intergenic |
| ATGTCGAAAGACCACCTGTT+TGG | 0.456148 | 3.2:-65174725 | MS.gene99876:CDS |
| GCTTGTCTCATAAGCCAAAC+AGG | 0.457200 | 3.2:+65174711 | None:intergenic |
| CTTGGCCTGCGGAGTGAACT+GGG | 0.461901 | 3.2:+65173778 | None:intergenic |
| CTTGCGCTCCATTGTCAGCT+TGG | 0.463609 | 3.2:+65171366 | None:intergenic |
| CAGATCTTTCCCGGAATGAC+GGG | 0.470670 | 3.2:+65174081 | None:intergenic |
| AACGTATGGAACTGATTCCT+CGG | 0.471977 | 3.2:+65173731 | None:intergenic |
| CTGGCGTCGTATGTGGTTGA+AGG | 0.472993 | 3.2:-65172118 | MS.gene99876:CDS |
| GTTTACCCTGGCGTCGTATG+TGG | 0.473968 | 3.2:-65172125 | MS.gene99876:CDS |
| CGAACTGCATTGAGCAAAAG+AGG | 0.483179 | 3.2:+65174756 | None:intergenic |
| CACGATACCGTGAGAAAGGC+TGG | 0.489317 | 3.2:-65171032 | MS.gene99876:CDS |
| AAATGTGCTACATTCTCCTC+AGG | 0.494178 | 3.2:+65170960 | None:intergenic |
| CTCGAGAGAATAGCTTTGAC+CGG | 0.494908 | 3.2:-65171191 | MS.gene99876:CDS |
| TGGATGTCGTTAGCTTGGAT+TGG | 0.497967 | 3.2:-65171166 | MS.gene99876:CDS |
| GGAATATTCATTCCAGAAAG+TGG | 0.500259 | 3.2:+65173840 | None:intergenic |
| GTTTGGCTTATGAGACAAGC+TGG | 0.504584 | 3.2:-65174708 | MS.gene99876:CDS |
| ACCTGGAAGAGAACATTGAA+TGG | 0.506655 | 3.2:+65174995 | None:intergenic |
| GCTGACGGTAGAAGGAGATT+AGG | 0.509708 | 3.2:-65171131 | MS.gene99876:CDS |
| CTTCAACCACATACGACGCC+AGG | 0.512222 | 3.2:+65172119 | None:intergenic |
| AATTTCATTGCAACCGTGGA+AGG | 0.514515 | 3.2:-65174036 | MS.gene99876:CDS |
| TGTGGGTGCTCCGTTTACCC+TGG | 0.516470 | 3.2:-65172137 | MS.gene99876:CDS |
| CCTCTTATCCTCTATGCAAG+TGG | 0.517942 | 3.2:-65171227 | MS.gene99876:CDS |
| CCCTCTACCAGCCTTTCTCA+CGG | 0.518645 | 3.2:+65171025 | None:intergenic |
| GCAAAAGTTTACAACATCAA+TGG | 0.520601 | 3.2:-65171405 | MS.gene99876:CDS |
| ATTTGACATTGTAAAAGGCA+AGG | 0.524512 | 3.2:-65173817 | MS.gene99876:CDS |
| GATACACGATACCGTGAGAA+AGG | 0.528071 | 3.2:-65171036 | MS.gene99876:CDS |
| ACCGTGAGAAAGGCTGGTAG+AGG | 0.529078 | 3.2:-65171026 | MS.gene99876:CDS |
| CGGTGTGGATGTCGTTAGCT+TGG | 0.535833 | 3.2:-65171171 | MS.gene99876:CDS |
| ATCCAAGGTAATGTTGATCC+TGG | 0.536465 | 3.2:-65171095 | MS.gene99876:CDS |
| ATGGATTTGAATGGGTAAAA+GGG | 0.537828 | 3.2:+65175014 | None:intergenic |
| TCAGATCTTTCCCGGAATGA+CGG | 0.538694 | 3.2:+65174080 | None:intergenic |
| GTTATATTACCCCATCAGGC+TGG | 0.542394 | 3.2:+65174009 | None:intergenic |
| ATCTGAAAACGTTGATCTTG+TGG | 0.544982 | 3.2:-65174063 | MS.gene99876:CDS |
| CTGAATCGTTCAAAATCCAC+TGG | 0.546416 | 3.2:+65171305 | None:intergenic |
| CACCAGGATCAACATTACCT+TGG | 0.550632 | 3.2:+65171093 | None:intergenic |
| CTTGGTCATGGCATCGTGGT+AGG | 0.553430 | 3.2:-65170987 | MS.gene99876:CDS |
| TGTACAGATATTCGATTCAT+GGG | 0.557652 | 3.2:-65171342 | MS.gene99876:CDS |
| TTTGACCCAGTTCACTCCGC+AGG | 0.557974 | 3.2:-65173783 | MS.gene99876:CDS |
| CACGGTATCGTGTATCCTAT+CGG | 0.559155 | 3.2:+65171043 | None:intergenic |
| CACTTGCATAGAGGATAAGA+GGG | 0.564501 | 3.2:+65171228 | None:intergenic |
| GATAGTGCTTCACCAACGTA+TGG | 0.570324 | 3.2:+65173717 | None:intergenic |
| CTCCTGATCCACTTGCATAG+AGG | 0.573141 | 3.2:+65171219 | None:intergenic |
| GCTAACTACACCGCAAAACA+TGG | 0.575089 | 3.2:+65175082 | None:intergenic |
| TGTCGTTAGCTTGGATTGGA+CGG | 0.575868 | 3.2:-65171162 | MS.gene99876:CDS |
| TTTGACATTGTAAAAGGCAA+GGG | 0.580301 | 3.2:-65173816 | MS.gene99876:CDS |
| GTGAACTGGGTCAAATATGA+CGG | 0.581289 | 3.2:+65173791 | None:intergenic |
| CACTTGATCAACTTGGCCTG+CGG | 0.582378 | 3.2:+65173767 | None:intergenic |
| TTTGAATGGGTAAAAGGGTG+TGG | 0.582685 | 3.2:+65175019 | None:intergenic |
| ACGTATGGAACTGATTCCTC+GGG | 0.583383 | 3.2:+65173732 | None:intergenic |
| GGACCAAATGTAGCTATCCA+AGG | 0.588652 | 3.2:-65171110 | MS.gene99876:CDS |
| ACTCCCTCACTTGATCAACT+TGG | 0.589624 | 3.2:+65173760 | None:intergenic |
| CTCTATGCAAGTGGATCAGG+AGG | 0.591186 | 3.2:-65171218 | MS.gene99876:CDS |
| ATTGGCATTCTCTGAACCAA+AGG | 0.592895 | 3.2:-65172062 | MS.gene99876:intron |
| TGAACTGGGTCAAATATGAC+GGG | 0.600113 | 3.2:+65173792 | None:intergenic |
| GGGAAACATATCCTGAACCT+TGG | 0.602324 | 3.2:-65171005 | MS.gene99876:CDS |
| CGAAAGAGCTGATTACCGAT+AGG | 0.604713 | 3.2:-65171058 | MS.gene99876:CDS |
| TTTGGCTTATGAGACAAGCT+GGG | 0.604715 | 3.2:-65174707 | MS.gene99876:CDS |
| CATATCCTGAACCTTGGTCA+TGG | 0.610852 | 3.2:-65170999 | MS.gene99876:CDS |
| GAGAATAGCTTTGACCGGTG+TGG | 0.612739 | 3.2:-65171186 | MS.gene99876:CDS |
| TTCGATCCAAACAGAACACC+AGG | 0.613403 | 3.2:+65171077 | None:intergenic |
| ACAAGCTGGGAGGTACATGA+AGG | 0.615658 | 3.2:-65174694 | MS.gene99876:intron |
| GGCAACAGAGCTTAGTCCAG+TGG | 0.616272 | 3.2:-65171321 | MS.gene99876:CDS |
| CAGGCCAAGTTGATCAAGTG+AGG | 0.617997 | 3.2:-65173764 | MS.gene99876:CDS |
| TCAGGCTGGAAAACCTTCCA+CGG | 0.624106 | 3.2:+65174023 | None:intergenic |
| GGATAAGAGGGAGATCTGGA+TGG | 0.628812 | 3.2:+65171240 | None:intergenic |
| ATACAATACCAAGCTGACAA+TGG | 0.630738 | 3.2:-65171374 | MS.gene99876:CDS |
| TTGAAATTTCATTGCAACCG+TGG | 0.633557 | 3.2:-65174040 | MS.gene99876:CDS |
| TTCAACCACATACGACGCCA+GGG | 0.634894 | 3.2:+65172120 | None:intergenic |
| GCGTCGTATGTGGTTGAAGG+CGG | 0.638298 | 3.2:-65172115 | MS.gene99876:CDS |
| ATTGAGCAAAAGAGGTTCTG+TGG | 0.641274 | 3.2:+65174764 | None:intergenic |
| CCGTGAGAAAGGCTGGTAGA+GGG | 0.642675 | 3.2:-65171025 | MS.gene99876:CDS |
| ATGGGTAAAAGGGTGTGGTG+TGG | 0.645380 | 3.2:+65175024 | None:intergenic |
| AGGCCAAGTTGATCAAGTGA+GGG | 0.645695 | 3.2:-65173763 | MS.gene99876:CDS |
| AGTGAGGGAGTTTATTCCCG+AGG | 0.654388 | 3.2:-65173748 | MS.gene99876:CDS |
| GGCTTATGAGACAAGCTGGG+AGG | 0.683527 | 3.2:-65174704 | MS.gene99876:CDS |
| TGGACGGTCGATATGGCTGA+CGG | 0.688575 | 3.2:-65171146 | MS.gene99876:CDS |
| ACGGAGCACCCACAAAACCA+AGG | 0.689374 | 3.2:+65172146 | None:intergenic |
| CTACCACGATGCCATGACCA+AGG | 0.690059 | 3.2:+65170988 | None:intergenic |
| CATCGTGGTAGGTACTCCTG+AGG | 0.701273 | 3.2:-65170976 | MS.gene99876:CDS |
| CAAGCTAACGACATCCACAC+CGG | 0.702622 | 3.2:+65171172 | None:intergenic |
| GAACCTTGGTCATGGCATCG+TGG | 0.703325 | 3.2:-65170991 | MS.gene99876:CDS |
| GAGGAATCAGTTCCATACGT+TGG | 0.710365 | 3.2:-65173729 | MS.gene99876:CDS |
| TGTCTCATAAGCCAAACAGG+TGG | 0.736737 | 3.2:+65174714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATTGATTATTTCA+AGG | + | chr3.2:65174158-65174177 | None:intergenic | 10.0% |
| !! | AATAAAATTGATTATTTCAA+GGG | + | chr3.2:65174157-65174176 | None:intergenic | 10.0% |
| !!! | TTTTGTTCTATTTATTTTTT+TGG | - | chr3.2:65173327-65173346 | MS.gene99876:intron | 10.0% |
| !! | ATAAAATTGATTATTTCAAG+GGG | + | chr3.2:65174156-65174175 | None:intergenic | 15.0% |
| !! | GAATTATAAAACAAACAAAA+AGG | + | chr3.2:65173387-65173406 | None:intergenic | 15.0% |
| !!! | CTTTATTAAATTGAAAGTAT+TGG | - | chr3.2:65173814-65173833 | MS.gene99876:CDS | 15.0% |
| !!! | TTTTATTTGTTCTTATCTTT+TGG | - | chr3.2:65173101-65173120 | MS.gene99876:intron | 15.0% |
| !! | AAATAAGGTTTACACAATAA+TGG | + | chr3.2:65171135-65171154 | None:intergenic | 20.0% |
| !! | AATAAGGTTTACACAATAAT+GGG | + | chr3.2:65171134-65171153 | None:intergenic | 20.0% |
| !! | ATGTATTCGTATTAGAATTT+GGG | - | chr3.2:65171383-65171402 | MS.gene99876:CDS | 20.0% |
| !! | CTATAAAATAAAAAGAAGTG+CGG | + | chr3.2:65172381-65172400 | None:intergenic | 20.0% |
| !! | TAAATGTTAATGATAGAAGA+TGG | + | chr3.2:65171064-65171083 | None:intergenic | 20.0% |
| !! | TAATAAAGAAGCAAACAAAT+TGG | + | chr3.2:65174436-65174455 | None:intergenic | 20.0% |
| !! | TATGTATTCGTATTAGAATT+TGG | - | chr3.2:65171382-65171401 | MS.gene99876:CDS | 20.0% |
| !! | TATTAAATAGAAATTGCGAT+CGG | - | chr3.2:65171621-65171640 | MS.gene99876:intron | 20.0% |
| !! | TGTCAAATAATAAAAAAAGC+AGG | - | chr3.2:65173258-65173277 | MS.gene99876:intron | 20.0% |
| !!! | AGGAAAGTATAACAAAAATT+AGG | + | chr3.2:65171353-65171372 | None:intergenic | 20.0% |
| !!! | CTTAGATAAAGTTTTAGTAA+GGG | + | chr3.2:65173479-65173498 | None:intergenic | 20.0% |
| !!! | TCTATTAAAGTACTTCATTT+TGG | + | chr3.2:65171566-65171585 | None:intergenic | 20.0% |
| !!! | TCTGTACTTTTTATTTAAAG+TGG | + | chr3.2:65173011-65173030 | None:intergenic | 20.0% |
| !!! | TCTTAGATAAAGTTTTAGTA+AGG | + | chr3.2:65173480-65173499 | None:intergenic | 20.0% |
| !!! | TGTAAACCTTATTTAATGAT+GGG | - | chr3.2:65171141-65171160 | MS.gene99876:CDS | 20.0% |
| !!! | TTTCTCTAAAATAAAGAGAT+TGG | - | chr3.2:65173929-65173948 | MS.gene99876:intron | 20.0% |
| ! | AAAAATATAACCAGTTCAGT+TGG | + | chr3.2:65172965-65172984 | None:intergenic | 25.0% |
| ! | AAAACAGACATATTTGATGT+CGG | - | chr3.2:65173506-65173525 | MS.gene99876:intron | 25.0% |
| ! | AAAGAAAAAAGCAAAGCATA+GGG | + | chr3.2:65173798-65173817 | None:intergenic | 25.0% |
| ! | ACGAATACATAAGATTATCA+AGG | + | chr3.2:65171373-65171392 | None:intergenic | 25.0% |
| ! | ACTGAATGATTGTTTAATAG+AGG | - | chr3.2:65172849-65172868 | MS.gene99876:intron | 25.0% |
| ! | AGGTATTACTTCCATTTATT+AGG | - | chr3.2:65171033-65171052 | MS.gene99876:CDS | 25.0% |
| ! | ATTCAGCTCAAATATTTGTT+TGG | - | chr3.2:65171744-65171763 | MS.gene99876:intron | 25.0% |
| ! | ATTCCATTTGACATTGTAAA+AGG | - | chr3.2:65172187-65172206 | MS.gene99876:intron | 25.0% |
| ! | CCAGTTATAAATACATTGTT+AGG | - | chr3.2:65171449-65171468 | MS.gene99876:intron | 25.0% |
| ! | CCTAACAATGTATTTATAAC+TGG | + | chr3.2:65171452-65171471 | None:intergenic | 25.0% |
| ! | CTAAAAAACATACAGTCTTA+TGG | + | chr3.2:65172440-65172459 | None:intergenic | 25.0% |
| ! | CTATATGGTTTAATTCAGTT+CGG | + | chr3.2:65172731-65172750 | None:intergenic | 25.0% |
| ! | GGTATTACTTCCATTTATTA+GGG | - | chr3.2:65171034-65171053 | MS.gene99876:CDS | 25.0% |
| ! | GTAAATTGTAATCAACAGTT+CGG | + | chr3.2:65172756-65172775 | None:intergenic | 25.0% |
| ! | TAAAGAAAAAAGCAAAGCAT+AGG | + | chr3.2:65173799-65173818 | None:intergenic | 25.0% |
| ! | TAATAAATGGAAGTAATACC+TGG | + | chr3.2:65171034-65171053 | None:intergenic | 25.0% |
| !! | AACATTGAATGGATTTGAAT+GGG | + | chr3.2:65171006-65171025 | None:intergenic | 25.0% |
| !! | ATTTAGAACAGGATAAGTAT+AGG | + | chr3.2:65171799-65171818 | None:intergenic | 25.0% |
| !! | GTGTAAACCTTATTTAATGA+TGG | - | chr3.2:65171140-65171159 | MS.gene99876:CDS | 25.0% |
| !! | TATAATTTTGCGTATCACAA+TGG | - | chr3.2:65174324-65174343 | MS.gene99876:intron | 25.0% |
| !! | TTGTTATGCATCTGAATTTT+GGG | - | chr3.2:65171179-65171198 | MS.gene99876:CDS | 25.0% |
| !!! | CTGTTGAAAATGTTCTAAAA+TGG | + | chr3.2:65171711-65171730 | None:intergenic | 25.0% |
| !!! | TCAATAATTTGCTTCAAGTA+TGG | + | chr3.2:65174734-65174753 | None:intergenic | 25.0% |
| !!! | TTATTTTGAGAAGCTAGTTT+AGG | - | chr3.2:65174258-65174277 | MS.gene99876:intron | 25.0% |
| AAAACCAATTTGACGTTTAG+AGG | + | chr3.2:65171823-65171842 | None:intergenic | 30.0% | |
| AAACCATTTCAAGAAAGAGA+AGG | - | chr3.2:65173227-65173246 | MS.gene99876:intron | 30.0% | |
| AACATATCCACTAAGTTACT+TGG | + | chr3.2:65173429-65173448 | None:intergenic | 30.0% | |
| AAGAAAAAAGCAAAGCATAG+GGG | + | chr3.2:65173797-65173816 | None:intergenic | 30.0% | |
| ACATTTGGAAAAGCTTACAA+TGG | - | chr3.2:65174354-65174373 | MS.gene99876:intron | 30.0% | |
| ACTCTATTTAACATGTGCAA+TGG | - | chr3.2:65171585-65171604 | MS.gene99876:intron | 30.0% | |
| AGATGGAAAACCCTAATAAA+TGG | + | chr3.2:65171047-65171066 | None:intergenic | 30.0% | |
| ATGATAAAACAGGGATACAA+AGG | + | chr3.2:65172353-65172372 | None:intergenic | 30.0% | |
| ATGGATTTGAATGGGTAAAA+GGG | + | chr3.2:65170998-65171017 | None:intergenic | 30.0% | |
| ATTAAAATGTCCAACTGAAC+TGG | - | chr3.2:65172952-65172971 | MS.gene99876:intron | 30.0% | |
| ATTGCAAATCATAGATAGAG+GGG | - | chr3.2:65172504-65172523 | MS.gene99876:intron | 30.0% | |
| ATTGGTAAGCATGAATCATA+TGG | + | chr3.2:65174418-65174437 | None:intergenic | 30.0% | |
| ATTTGACATTGTAAAAGGCA+AGG | - | chr3.2:65172192-65172211 | MS.gene99876:intron | 30.0% | |
| CACAAACCCATCATTAAATA+AGG | + | chr3.2:65171150-65171169 | None:intergenic | 30.0% | |
| CAGATGTATGAAACTAAGAA+TGG | - | chr3.2:65171650-65171669 | MS.gene99876:intron | 30.0% | |
| CTCTATTTAACATGTGCAAT+GGG | - | chr3.2:65171586-65171605 | MS.gene99876:intron | 30.0% | |
| GATTGCAAATCATAGATAGA+GGG | - | chr3.2:65172503-65172522 | MS.gene99876:intron | 30.0% | |
| GCAAAAGTTTACAACATCAA+TGG | - | chr3.2:65174604-65174623 | MS.gene99876:intron | 30.0% | |
| TAACCAATGAGTTCTTAAAC+TGG | - | chr3.2:65174099-65174118 | MS.gene99876:CDS | 30.0% | |
| TGATTGCAAATCATAGATAG+AGG | - | chr3.2:65172502-65172521 | MS.gene99876:intron | 30.0% | |
| TGGCAGAAACACAAATTTAA+TGG | + | chr3.2:65173409-65173428 | None:intergenic | 30.0% | |
| TGTACAGATATTCGATTCAT+GGG | - | chr3.2:65174667-65174686 | MS.gene99876:intron | 30.0% | |
| TTTCCTTCTCTTTCTTGAAA+TGG | + | chr3.2:65173233-65173252 | None:intergenic | 30.0% | |
| TTTGACATTGTAAAAGGCAA+GGG | - | chr3.2:65172193-65172212 | MS.gene99876:intron | 30.0% | |
| ! | AATGGATTTGAATGGGTAAA+AGG | + | chr3.2:65170999-65171018 | None:intergenic | 30.0% |
| ! | AGATGTATGAATCATCGATT+TGG | - | chr3.2:65172617-65172636 | MS.gene99876:intron | 30.0% |
| ! | ATGGACAGCTTTTTAATCAT+AGG | + | chr3.2:65174399-65174418 | None:intergenic | 30.0% |
| ! | ATGTTTTGTAGACAGTTAAC+CGG | - | chr3.2:65172787-65172806 | MS.gene99876:intron | 30.0% |
| ! | GAACATTGAATGGATTTGAA+TGG | + | chr3.2:65171007-65171026 | None:intergenic | 30.0% |
| ! | GTTGTTATGCATCTGAATTT+TGG | - | chr3.2:65171178-65171197 | MS.gene99876:CDS | 30.0% |
| ! | TCATTGGTTATTGTGTAGAA+AGG | + | chr3.2:65174089-65174108 | None:intergenic | 30.0% |
| ! | TTCGTATTAGAATTTGGGTT+CGG | - | chr3.2:65171388-65171407 | MS.gene99876:CDS | 30.0% |
| ! | TTGCCTTTTACAATGTCAAA+TGG | + | chr3.2:65172193-65172212 | None:intergenic | 30.0% |
| !! | AATTTTGGGAATTTATGTGC+AGG | - | chr3.2:65171193-65171212 | MS.gene99876:CDS | 30.0% |
| !! | CTTCTTGAATAAGCTTTGAA+AGG | - | chr3.2:65171846-65171865 | MS.gene99876:intron | 30.0% |
| !! | GATAAAGTTTTAGTAAGGGA+AGG | + | chr3.2:65173475-65173494 | None:intergenic | 30.0% |
| !! | TTCAGTTTTGTGAATCATGT+CGG | - | chr3.2:65173633-65173652 | MS.gene99876:intron | 30.0% |
| !!! | GAATGTAGCACATTTTTTTG+AGG | - | chr3.2:65175057-65175076 | MS.gene99876:CDS | 30.0% |
| AACTCTTCAAAATTTCAGCC+CGG | + | chr3.2:65172809-65172828 | None:intergenic | 35.0% | |
| AAGCTTACAATGGAAAAGCT+TGG | - | chr3.2:65174364-65174383 | MS.gene99876:intron | 35.0% | |
| AATGCCTCTAAACGTCAAAT+TGG | - | chr3.2:65171816-65171835 | MS.gene99876:intron | 35.0% | |
| AGGTGGTTAAAGATTACCTT+TGG | + | chr3.2:65173966-65173985 | None:intergenic | 35.0% | |
| ATACAATACCAAGCTGACAA+TGG | - | chr3.2:65174635-65174654 | MS.gene99876:intron | 35.0% | |
| ATCAACAGTTCGGTTCTATA+TGG | + | chr3.2:65172746-65172765 | None:intergenic | 35.0% | |
| ATCTGAAAACGTTGATCTTG+TGG | - | chr3.2:65171946-65171965 | MS.gene99876:intron | 35.0% | |
| CGTCTTAAATAGTAGTTACC+TGG | - | chr3.2:65172675-65172694 | MS.gene99876:intron | 35.0% | |
| CTGTACAGATATTCGATTCA+TGG | - | chr3.2:65174666-65174685 | MS.gene99876:intron | 35.0% | |
| CTTAAACTGGTCATTTAGAG+CGG | - | chr3.2:65174112-65174131 | MS.gene99876:intron | 35.0% | |
| GATAATAAATCTGCAGTCCT+TGG | - | chr3.2:65173846-65173865 | MS.gene99876:CDS | 35.0% | |
| GATATTCTTACACCACTTTC+TGG | - | chr3.2:65172157-65172176 | MS.gene99876:CDS | 35.0% | |
| GATTAGATCATTAGAGTCTC+TGG | + | chr3.2:65173714-65173733 | None:intergenic | 35.0% | |
| GCATATGCAATAAAGAGAGA+AGG | + | chr3.2:65173365-65173384 | None:intergenic | 35.0% | |
| GGAATATTCATTCCAGAAAG+TGG | + | chr3.2:65172172-65172191 | None:intergenic | 35.0% | |
| GGATTGTCACATTCTTTGTA+TGG | - | chr3.2:65171765-65171784 | MS.gene99876:intron | 35.0% | |
| GTCACATTCTTTGTATGGTT+TGG | - | chr3.2:65171770-65171789 | MS.gene99876:intron | 35.0% | |
| GTGGAAATTCAACACAGTTT+GGG | - | chr3.2:65173540-65173559 | MS.gene99876:intron | 35.0% | |
| TCAAAACTGAACTACTCTAC+TGG | + | chr3.2:65173592-65173611 | None:intergenic | 35.0% | |
| TGACCAGTTTAAGAACTCAT+TGG | + | chr3.2:65174105-65174124 | None:intergenic | 35.0% | |
| TGGAATTTGACTAAACAGAC+AGG | + | chr3.2:65172420-65172439 | None:intergenic | 35.0% | |
| TGTATGAAACTAAGAATGGC+TGG | - | chr3.2:65171654-65171673 | MS.gene99876:intron | 35.0% | |
| TGTGGAAATTCAACACAGTT+TGG | - | chr3.2:65173539-65173558 | MS.gene99876:intron | 35.0% | |
| TGTTAGGTCATATGTCATCA+TGG | - | chr3.2:65171465-65171484 | MS.gene99876:intron | 35.0% | |
| TTACCTTGGATAGCTACATT+TGG | + | chr3.2:65174905-65174924 | None:intergenic | 35.0% | |
| TTATTCAGCAGTTCAAAACC+TGG | - | chr3.2:65174054-65174073 | MS.gene99876:CDS | 35.0% | |
| TTCACAAAACTGAATCGAAC+TGG | + | chr3.2:65173627-65173646 | None:intergenic | 35.0% | |
| TTGAAATTTCATTGCAACCG+TGG | - | chr3.2:65171969-65171988 | MS.gene99876:intron | 35.0% | |
| ! | ACTATCAATTTTGCGCAAAG+AGG | - | chr3.2:65172309-65172328 | MS.gene99876:intron | 35.0% |
| ! | AGAGAGCTTCGTTTCATTTT+AGG | - | chr3.2:65172907-65172926 | MS.gene99876:intron | 35.0% |
| ! | CATATTATCTTGATAGCCAC+TGG | + | chr3.2:65172586-65172605 | None:intergenic | 35.0% |
| ! | GGTATTTTTCGCAGATGATT+TGG | + | chr3.2:65171910-65171929 | None:intergenic | 35.0% |
| ! | TCGTATTAGAATTTGGGTTC+GGG | - | chr3.2:65171389-65171408 | MS.gene99876:CDS | 35.0% |
| ! | TGTTTTGTAGACAGTTAACC+GGG | - | chr3.2:65172788-65172807 | MS.gene99876:intron | 35.0% |
| !! | AAATTGAAAGTATTGGTCGC+AGG | - | chr3.2:65173821-65173840 | MS.gene99876:CDS | 35.0% |
| !! | TCTGTGGCATTAGTTGTTTT+AGG | + | chr3.2:65171232-65171251 | None:intergenic | 35.0% |
| !! | TGTTGTGGTTCTGATTATGT+TGG | - | chr3.2:65172084-65172103 | MS.gene99876:CDS | 35.0% |
| !!! | ATGATGGGTTTGTGTTGTTT+TGG | - | chr3.2:65171156-65171175 | MS.gene99876:CDS | 35.0% |
| !!! | CATTTTTTTGAGGTTGCCAA+AGG | - | chr3.2:65175067-65175086 | MS.gene99876:CDS | 35.0% |
| !!! | GTGTTGTTTTCTGGGTAAAA+TGG | + | chr3.2:65170966-65170985 | None:intergenic | 35.0% |
| !!! | TTCGTTTCATTTTAGGACAG+CGG | - | chr3.2:65172914-65172933 | MS.gene99876:intron | 35.0% |
| AAAAAGCAGGAAACGTGAAG+TGG | - | chr3.2:65173271-65173290 | MS.gene99876:intron | 40.0% | |
| AAATGTGCTACATTCTCCTC+AGG | + | chr3.2:65175052-65175071 | None:intergenic | 40.0% | |
| AAGCACATCCTAAGTTCACA+TGG | + | chr3.2:65174025-65174044 | None:intergenic | 40.0% | |
| AATTTCATTGCAACCGTGGA+AGG | - | chr3.2:65171973-65171992 | MS.gene99876:intron | 40.0% | |
| ACCTGGAAGAGAACATTGAA+TGG | + | chr3.2:65171017-65171036 | None:intergenic | 40.0% | |
| ACTTGTCTCCATGTGAACTT+AGG | - | chr3.2:65174014-65174033 | MS.gene99876:intron | 40.0% | |
| AGAACCACAACACAAGAAGT+AGG | + | chr3.2:65172076-65172095 | None:intergenic | 40.0% | |
| AGATCATTAGAGTCTCTGGT+GGG | + | chr3.2:65173710-65173729 | None:intergenic | 40.0% | |
| ATAGTAGTTACCTGGAGACT+AGG | - | chr3.2:65172683-65172702 | MS.gene99876:intron | 40.0% | |
| ATTGAGCAAAAGAGGTTCTG+TGG | + | chr3.2:65171248-65171267 | None:intergenic | 40.0% | |
| ATTGGCATTCTCTGAACCAA+AGG | - | chr3.2:65173947-65173966 | MS.gene99876:intron | 40.0% | |
| CACAATGGAGCTGTTACATT+TGG | - | chr3.2:65174339-65174358 | MS.gene99876:intron | 40.0% | |
| CACTTGCATAGAGGATAAGA+GGG | + | chr3.2:65174784-65174803 | None:intergenic | 40.0% | |
| CTGAATCGTTCAAAATCCAC+TGG | + | chr3.2:65174707-65174726 | None:intergenic | 40.0% | |
| GAACCACAACACAAGAAGTA+GGG | + | chr3.2:65172075-65172094 | None:intergenic | 40.0% | |
| GAGAGTTATATTACCCCATC+AGG | + | chr3.2:65172007-65172026 | None:intergenic | 40.0% | |
| GGGTGTAATGACATTAAGTG+AGG | - | chr3.2:65172524-65172543 | MS.gene99876:intron | 40.0% | |
| GTAGAAAGGTAAAACATGCC+AGG | + | chr3.2:65174075-65174094 | None:intergenic | 40.0% | |
| GTGAACTGGGTCAAATATGA+CGG | + | chr3.2:65172221-65172240 | None:intergenic | 40.0% | |
| GTTTAATAGAGGAAAGCTGC+TGG | - | chr3.2:65172860-65172879 | MS.gene99876:intron | 40.0% | |
| GTTTCTGCCAAGTAACTTAG+TGG | - | chr3.2:65173419-65173438 | MS.gene99876:intron | 40.0% | |
| TAGATCATTAGAGTCTCTGG+TGG | + | chr3.2:65173711-65173730 | None:intergenic | 40.0% | |
| TATGCTTTCAACTGTCAGAG+TGG | - | chr3.2:65174492-65174511 | MS.gene99876:intron | 40.0% | |
| TCCATTCAATGTTCTCTTCC+AGG | - | chr3.2:65171013-65171032 | MS.gene99876:CDS | 40.0% | |
| TGAACTGGGTCAAATATGAC+GGG | + | chr3.2:65172220-65172239 | None:intergenic | 40.0% | |
| TTACCCTACTTCTTGTGTTG+TGG | - | chr3.2:65172069-65172088 | MS.gene99876:CDS | 40.0% | |
| TTTGAATGGGTAAAAGGGTG+TGG | + | chr3.2:65170993-65171012 | None:intergenic | 40.0% | |
| ! | AACGTATGGAACTGATTCCT+CGG | + | chr3.2:65172281-65172300 | None:intergenic | 40.0% |
| ! | ACTGAACTACTCTACTGGTT+TGG | + | chr3.2:65173587-65173606 | None:intergenic | 40.0% |
| ! | ACTTTTGCAGTAACGAGTGA+AGG | + | chr3.2:65174592-65174611 | None:intergenic | 40.0% |
| ! | ATCTGGATGGCTTTGCTTTA+CGG | + | chr3.2:65174759-65174778 | None:intergenic | 40.0% |
| ! | ATTTTGCGCAAAGAGGTTTG+AGG | - | chr3.2:65172316-65172335 | MS.gene99876:intron | 40.0% |
| ! | CAACGTTTTCAGATCTTTCC+CGG | + | chr3.2:65171940-65171959 | None:intergenic | 40.0% |
| ! | TTTGGCTTATGAGACAAGCT+GGG | - | chr3.2:65171302-65171321 | MS.gene99876:CDS | 40.0% |
| !! | CGTTTAGAGGCATTTAGAAC+AGG | + | chr3.2:65171810-65171829 | None:intergenic | 40.0% |
| !! | CTCGATACTGATTCTGTAAC+AGG | - | chr3.2:65172120-65172139 | MS.gene99876:CDS | 40.0% |
| !!! | TCGTTTCATTTTAGGACAGC+GGG | - | chr3.2:65172915-65172934 | MS.gene99876:intron | 40.0% |
| ACTCCCTCACTTGATCAACT+TGG | + | chr3.2:65172252-65172271 | None:intergenic | 45.0% | |
| ACTTACGAGATAGACGAAGG+TGG | + | chr3.2:65173983-65174002 | None:intergenic | 45.0% | |
| AGTAACGAGTGAAGGATCTG+TGG | + | chr3.2:65174584-65174603 | None:intergenic | 45.0% | |
| ATCCTCTATGCAAGTGGATC+AGG | - | chr3.2:65174788-65174807 | MS.gene99876:CDS | 45.0% | |
| ATGTCGAAAGACCACCTGTT+TGG | - | chr3.2:65171284-65171303 | MS.gene99876:CDS | 45.0% | |
| CACGGTATCGTGTATCCTAT+CGG | + | chr3.2:65174969-65174988 | None:intergenic | 45.0% | |
| CAGGGATACAAAGGTAGTGT+AGG | + | chr3.2:65172344-65172363 | None:intergenic | 45.0% | |
| CATATCCTGAACCTTGGTCA+TGG | - | chr3.2:65175010-65175029 | MS.gene99876:CDS | 45.0% | |
| CCACTTGCATAGAGGATAAG+AGG | + | chr3.2:65174785-65174804 | None:intergenic | 45.0% | |
| CCTACTTACGAGATAGACGA+AGG | + | chr3.2:65173986-65174005 | None:intergenic | 45.0% | |
| CCTCTTATCCTCTATGCAAG+TGG | - | chr3.2:65174782-65174801 | MS.gene99876:CDS | 45.0% | |
| CCTTCGTCTATCTCGTAAGT+AGG | - | chr3.2:65173983-65174002 | MS.gene99876:intron | 45.0% | |
| CGAAAAATACCCGTCATTCC+GGG | - | chr3.2:65171919-65171938 | MS.gene99876:intron | 45.0% | |
| CGAAAGAGCTGATTACCGAT+AGG | - | chr3.2:65174951-65174970 | MS.gene99876:intron | 45.0% | |
| CGAACTGCATTGAGCAAAAG+AGG | + | chr3.2:65171256-65171275 | None:intergenic | 45.0% | |
| GAGGAATCAGTTCCATACGT+TGG | - | chr3.2:65172280-65172299 | MS.gene99876:intron | 45.0% | |
| GATACACGATACCGTGAGAA+AGG | - | chr3.2:65174973-65174992 | MS.gene99876:intron | 45.0% | |
| GATAGTGCTTCACCAACGTA+TGG | + | chr3.2:65172295-65172314 | None:intergenic | 45.0% | |
| GCGAAAAATACCCGTCATTC+CGG | - | chr3.2:65171918-65171937 | MS.gene99876:intron | 45.0% | |
| GCGGCTGAGATGATAAAACA+GGG | + | chr3.2:65172362-65172381 | None:intergenic | 45.0% | |
| GCTTGTCTCATAAGCCAAAC+AGG | + | chr3.2:65171301-65171320 | None:intergenic | 45.0% | |
| GGACCAAATGTAGCTATCCA+AGG | - | chr3.2:65174899-65174918 | MS.gene99876:intron | 45.0% | |
| GGGAAACATATCCTGAACCT+TGG | - | chr3.2:65175004-65175023 | MS.gene99876:CDS | 45.0% | |
| GTCGGCAGTTCAGTTTAGTT+CGG | - | chr3.2:65173651-65173670 | MS.gene99876:intron | 45.0% | |
| GTTATATTACCCCATCAGGC+TGG | + | chr3.2:65172003-65172022 | None:intergenic | 45.0% | |
| GTTTCATAGCCAATCCTGCA+AGG | + | chr3.2:65173081-65173100 | None:intergenic | 45.0% | |
| TAGAAGTGATACGACCTTGC+AGG | - | chr3.2:65173064-65173083 | MS.gene99876:intron | 45.0% | |
| TAGAGGATAAGAGGGAGATC+TGG | + | chr3.2:65174776-65174795 | None:intergenic | 45.0% | |
| TCAGATCTTTCCCGGAATGA+CGG | + | chr3.2:65171932-65171951 | None:intergenic | 45.0% | |
| TGCGGCTGAGATGATAAAAC+AGG | + | chr3.2:65172363-65172382 | None:intergenic | 45.0% | |
| TGTCTCATAAGCCAAACAGG+TGG | + | chr3.2:65171298-65171317 | None:intergenic | 45.0% | |
| TTCAGTTCGGTTCTGCAGTT+CGG | + | chr3.2:65172718-65172737 | None:intergenic | 45.0% | |
| TTCGATCCAAACAGAACACC+AGG | + | chr3.2:65174935-65174954 | None:intergenic | 45.0% | |
| ! | ACGTATGGAACTGATTCCTC+GGG | + | chr3.2:65172280-65172299 | None:intergenic | 45.0% |
| ! | CAGTTCAGTTTAGTTCGGTG+TGG | - | chr3.2:65173656-65173675 | MS.gene99876:intron | 45.0% |
| ! | CTTTTGCTCAATGCAGTTCG+TGG | - | chr3.2:65171256-65171275 | MS.gene99876:CDS | 45.0% |
| ! | GTGAAGTGGTCTAAAGCATG+AGG | - | chr3.2:65173285-65173304 | MS.gene99876:intron | 45.0% |
| ! | GTTTGGCTTATGAGACAAGC+TGG | - | chr3.2:65171301-65171320 | MS.gene99876:CDS | 45.0% |
| ! | TGGATGTCGTTAGCTTGGAT+TGG | - | chr3.2:65174843-65174862 | MS.gene99876:intron | 45.0% |
| ! | TGTCGTTAGCTTGGATTGGA+CGG | - | chr3.2:65174847-65174866 | MS.gene99876:intron | 45.0% |
| ! | TTATCTTGATAGCCACTGGC+AGG | + | chr3.2:65172582-65172601 | None:intergenic | 45.0% |
| !! | AGGCCAAGTTGATCAAGTGA+GGG | - | chr3.2:65172246-65172265 | MS.gene99876:intron | 45.0% |
| !! | CGCAGATGATTTGGTAACTC+TGG | + | chr3.2:65171901-65171920 | None:intergenic | 45.0% |
| !! | CTCGAGAGAATAGCTTTGAC+CGG | - | chr3.2:65174818-65174837 | MS.gene99876:intron | 45.0% |
| !!! | ATCTGCAGTCCTTGGTTTTG+TGG | - | chr3.2:65173854-65173873 | MS.gene99876:CDS | 45.0% |
| !!! | GTGGTGTGGTGTTGTTTTCT+GGG | + | chr3.2:65170974-65170993 | None:intergenic | 45.0% |
| !!! | TCTGCAGTCCTTGGTTTTGT+GGG | - | chr3.2:65173855-65173874 | MS.gene99876:CDS | 45.0% |
| !!! | TGTGGTGTGGTGTTGTTTTC+TGG | + | chr3.2:65170975-65170994 | None:intergenic | 45.0% |
| !!! | TTTCATTTTAGGACAGCGGG+AGG | - | chr3.2:65172918-65172937 | MS.gene99876:intron | 45.0% |
| !!! | TTTTTAAAAAATTTTTAATC+TGG | - | chr3.2:65171108-65171127 | MS.gene99876:CDS | 5.0% |
| ACATACGACGCCAGGGTAAA+CGG | + | chr3.2:65173885-65173904 | None:intergenic | 50.0% | |
| AGTGAGGGAGTTTATTCCCG+AGG | - | chr3.2:65172261-65172280 | MS.gene99876:intron | 50.0% | |
| CAAGCTAACGACATCCACAC+CGG | + | chr3.2:65174840-65174859 | None:intergenic | 50.0% | |
| CACTTGATCAACTTGGCCTG+CGG | + | chr3.2:65172245-65172264 | None:intergenic | 50.0% | |
| CAGATCTTTCCCGGAATGAC+GGG | + | chr3.2:65171931-65171950 | None:intergenic | 50.0% | |
| CTCCTGATCCACTTGCATAG+AGG | + | chr3.2:65174793-65174812 | None:intergenic | 50.0% | |
| CTCTATGCAAGTGGATCAGG+AGG | - | chr3.2:65174791-65174810 | MS.gene99876:CDS | 50.0% | |
| GATGTCGGTGCACAGTTATG+TGG | - | chr3.2:65173521-65173540 | MS.gene99876:intron | 50.0% | |
| GCTGACGGTAGAAGGAGATT+AGG | - | chr3.2:65174878-65174897 | MS.gene99876:intron | 50.0% | |
| GGATAAGAGGGAGATCTGGA+TGG | + | chr3.2:65174772-65174791 | None:intergenic | 50.0% | |
| GTGATACGACCTTGCAGGAT+TGG | - | chr3.2:65173069-65173088 | MS.gene99876:intron | 50.0% | |
| GTTGAACAGTCCTAGTCTCC+AGG | + | chr3.2:65172696-65172715 | None:intergenic | 50.0% | |
| TCAGGCTGGAAAACCTTCCA+CGG | + | chr3.2:65171989-65172008 | None:intergenic | 50.0% | |
| TCGATATGGCTGACGGTAGA+AGG | - | chr3.2:65174870-65174889 | MS.gene99876:intron | 50.0% | |
| TTCAACCACATACGACGCCA+GGG | + | chr3.2:65173892-65173911 | None:intergenic | 50.0% | |
| ! | ACAAGCTGGGAGGTACATGA+AGG | - | chr3.2:65171315-65171334 | MS.gene99876:CDS | 50.0% |
| ! | ATGGGTAAAAGGGTGTGGTG+TGG | + | chr3.2:65170988-65171007 | None:intergenic | 50.0% |
| ! | CTGGTGGGCAGTTCAAACTT+CGG | + | chr3.2:65173695-65173714 | None:intergenic | 50.0% |
| ! | CTTGGATTGGACGGTCGATA+TGG | - | chr3.2:65174856-65174875 | MS.gene99876:intron | 50.0% |
| ! | GAAGGTTTTCCAGCCTGATG+GGG | - | chr3.2:65171991-65172010 | MS.gene99876:intron | 50.0% |
| ! | GGAAGGTTTTCCAGCCTGAT+GGG | - | chr3.2:65171990-65172009 | MS.gene99876:intron | 50.0% |
| ! | TGGAAGGTTTTCCAGCCTGA+TGG | - | chr3.2:65171989-65172008 | MS.gene99876:intron | 50.0% |
| !! | CAGGCCAAGTTGATCAAGTG+AGG | - | chr3.2:65172245-65172264 | MS.gene99876:intron | 50.0% |
| !! | GAGAATAGCTTTGACCGGTG+TGG | - | chr3.2:65174823-65174842 | MS.gene99876:intron | 50.0% |
| !! | TGGTTTGGTGCATGCTCTAC+TGG | + | chr3.2:65173572-65173591 | None:intergenic | 50.0% |
| AACACTGTCTGTCCTGCCAG+TGG | - | chr3.2:65172567-65172586 | MS.gene99876:intron | 55.0% | |
| AAGCCTCCAGCTCGTAAGGT+GGG | - | chr3.2:65171418-65171437 | MS.gene99876:CDS | 55.0% | |
| ACCGTGAGAAAGGCTGGTAG+AGG | - | chr3.2:65174983-65175002 | MS.gene99876:intron | 55.0% | |
| CACGATACCGTGAGAAAGGC+TGG | - | chr3.2:65174977-65174996 | MS.gene99876:intron | 55.0% | |
| CATCGTGGTAGGTACTCCTG+AGG | - | chr3.2:65175033-65175052 | MS.gene99876:CDS | 55.0% | |
| CCCTCTACCAGCCTTTCTCA+CGG | + | chr3.2:65174987-65175006 | None:intergenic | 55.0% | |
| CCGTGAGAAAGGCTGGTAGA+GGG | - | chr3.2:65174984-65175003 | MS.gene99876:intron | 55.0% | |
| CGATGCCATGACCAAGGTTC+AGG | + | chr3.2:65175018-65175037 | None:intergenic | 55.0% | |
| CGGTGTGGATGTCGTTAGCT+TGG | - | chr3.2:65174838-65174857 | MS.gene99876:intron | 55.0% | |
| CTACCACGATGCCATGACCA+AGG | + | chr3.2:65175024-65175043 | None:intergenic | 55.0% | |
| CTGGCGTCGTATGTGGTTGA+AGG | - | chr3.2:65173891-65173910 | MS.gene99876:intron | 55.0% | |
| CTTCAACCACATACGACGCC+AGG | + | chr3.2:65173893-65173912 | None:intergenic | 55.0% | |
| CTTGCGCTCCATTGTCAGCT+TGG | + | chr3.2:65174646-65174665 | None:intergenic | 55.0% | |
| CTTGGTCATGGCATCGTGGT+AGG | - | chr3.2:65175022-65175041 | MS.gene99876:CDS | 55.0% | |
| GAACCTTGGTCATGGCATCG+TGG | - | chr3.2:65175018-65175037 | MS.gene99876:CDS | 55.0% | |
| GACTAAGCCTCCAGCTCGTA+AGG | - | chr3.2:65171414-65171433 | MS.gene99876:CDS | 55.0% | |
| GCGTCGTATGTGGTTGAAGG+CGG | - | chr3.2:65173894-65173913 | MS.gene99876:intron | 55.0% | |
| GGCAACAGAGCTTAGTCCAG+TGG | - | chr3.2:65174688-65174707 | MS.gene99876:intron | 55.0% | |
| GGCTTATGAGACAAGCTGGG+AGG | - | chr3.2:65171305-65171324 | MS.gene99876:CDS | 55.0% | |
| GTTTACCCTGGCGTCGTATG+TGG | - | chr3.2:65173884-65173903 | MS.gene99876:intron | 55.0% | |
| TAAGCCTCCAGCTCGTAAGG+TGG | - | chr3.2:65171417-65171436 | MS.gene99876:CDS | 55.0% | |
| TGGACGGTCGATATGGCTGA+CGG | - | chr3.2:65174863-65174882 | MS.gene99876:intron | 55.0% | |
| TTTGACCCAGTTCACTCCGC+AGG | - | chr3.2:65172226-65172245 | MS.gene99876:intron | 55.0% | |
| ! | ACGGAGCACCCACAAAACCA+AGG | + | chr3.2:65173866-65173885 | None:intergenic | 55.0% |
| ACTTGGCCTGCGGAGTGAAC+TGG | + | chr3.2:65172235-65172254 | None:intergenic | 60.0% | |
| AGCCTCCAGCTCGTAAGGTG+GGG | - | chr3.2:65171419-65171438 | MS.gene99876:CDS | 60.0% | |
| CTTGGCCTGCGGAGTGAACT+GGG | + | chr3.2:65172234-65172253 | None:intergenic | 60.0% | |
| GACAGCGGGAGGACGAAAGA+AGG | - | chr3.2:65172929-65172948 | MS.gene99876:intron | 60.0% | |
| TCCAGCTCGTAAGGTGGGGA+CGG | - | chr3.2:65171423-65171442 | MS.gene99876:CDS | 60.0% | |
| TGTGGGTGCTCCGTTTACCC+TGG | - | chr3.2:65173872-65173891 | MS.gene99876:intron | 60.0% | |
| ACCGTCCCCACCTTACGAGC+TGG | + | chr3.2:65171427-65171446 | None:intergenic | 65.0% | |
| GTCCCCACCTTACGAGCTGG+AGG | + | chr3.2:65171424-65171443 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 65170929 | 65175102 | 65170929 | ID=MS.gene99876 |
| chr3.2 | mRNA | 65170929 | 65175102 | 65170929 | ID=MS.gene99876.t1;Parent=MS.gene99876 |
| chr3.2 | exon | 65174997 | 65175102 | 65174997 | ID=MS.gene99876.t1.exon1;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65174997 | 65175102 | 65174997 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| chr3.2 | exon | 65174695 | 65174816 | 65174695 | ID=MS.gene99876.t1.exon2;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65174695 | 65174816 | 65174695 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| chr3.2 | exon | 65174019 | 65174129 | 65174019 | ID=MS.gene99876.t1.exon3;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65174019 | 65174129 | 65174019 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| chr3.2 | exon | 65173701 | 65173889 | 65173701 | ID=MS.gene99876.t1.exon4;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65173701 | 65173889 | 65173701 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| chr3.2 | exon | 65172063 | 65172188 | 65172063 | ID=MS.gene99876.t1.exon5;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65172063 | 65172188 | 65172063 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| chr3.2 | exon | 65170929 | 65171444 | 65170929 | ID=MS.gene99876.t1.exon6;Parent=MS.gene99876.t1 |
| chr3.2 | CDS | 65170929 | 65171444 | 65170929 | ID=cds.MS.gene99876.t1;Parent=MS.gene99876.t1 |
| Gene Sequence |
| Protein sequence |
