AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009167.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009167.01.T01 MTR_0011s0320 98.997 299 3 0 1 299 51 349 0.0 602
MsG0280009167.01.T01 MTR_4g114360 82.667 300 47 2 1 300 51 345 1.09e-179 499
MsG0280009167.01.T01 MTR_3g107470 75.000 300 70 2 1 300 55 349 1.79e-164 461
MsG0280009167.01.T01 MTR_0662s0010 87.225 227 29 0 1 227 51 277 2.13e-141 400
MsG0280009167.01.T01 MTR_7g110380 46.465 297 152 3 1 296 52 342 2.96e-95 286
MsG0280009167.01.T01 MTR_4g123900 45.791 297 154 4 1 291 48 343 1.58e-85 261
MsG0280009167.01.T01 MTR_4g123900 49.796 245 121 2 1 244 48 291 7.80e-81 246
MsG0280009167.01.T01 MTR_2g070400 41.438 292 159 4 1 290 48 329 5.78e-71 223
MsG0280009167.01.T01 MTR_3g070000 31.818 264 166 4 1 255 60 318 4.02e-29 113
MsG0280009167.01.T01 MTR_5g081710 32.567 261 168 3 1 255 44 302 1.30e-28 112
MsG0280009167.01.T01 MTR_3g462070 31.660 259 169 3 3 255 47 303 1.86e-27 108
MsG0280009167.01.T01 MTR_8g090130 34.601 263 160 6 1 255 47 305 2.76e-26 105
MsG0280009167.01.T01 MTR_4g018760 29.885 261 175 3 1 255 48 306 2.88e-24 100
MsG0280009167.01.T01 MTR_1g030320 22.759 290 216 4 7 290 54 341 1.33e-23 99.0
MsG0280009167.01.T01 MTR_3g072380 22.261 283 213 3 7 284 55 335 8.76e-22 94.0
MsG0280009167.01.T01 MTR_4g101860 26.766 269 189 5 1 263 88 354 2.38e-19 87.4
MsG0280009167.01.T01 MTR_8g016090 29.391 279 176 9 24 288 231 502 1.94e-18 85.5
MsG0280009167.01.T01 MTR_8g016090 29.368 269 169 9 34 288 191 452 2.20e-17 82.4
MsG0280009167.01.T01 MTR_2g094640 25.649 308 194 11 4 295 51 339 1.50e-16 79.3
MsG0280009167.01.T01 MTR_4g058860 25.243 309 203 11 4 300 51 343 2.12e-16 79.0
MsG0280009167.01.T01 MTR_3g094270 25.641 273 163 9 33 289 73 321 2.07e-15 75.9
MsG0280009167.01.T01 MTR_3g094260 25.843 267 179 8 33 288 73 331 9.86e-15 73.9
MsG0280009167.01.T01 MTR_2g038410 24.828 290 194 9 18 298 106 380 4.17e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009167.01.T01 AT4G32390 79.000 300 59 2 1 300 55 350 9.68e-173 482
MsG0280009167.01.T01 AT5G25400 77.000 300 64 2 1 300 55 349 2.15e-169 473
MsG0280009167.01.T01 AT2G25520 78.000 300 59 3 1 300 55 347 3.13e-168 470
MsG0280009167.01.T01 AT5G11230 73.667 300 76 2 1 300 55 351 2.96e-159 448
MsG0280009167.01.T01 AT3G17430 45.151 299 154 4 1 298 49 338 5.70e-90 273
MsG0280009167.01.T01 AT3G17430 45.151 299 154 4 1 298 49 338 5.70e-90 273
MsG0280009167.01.T01 AT1G48230 47.138 297 143 4 1 296 49 332 1.35e-88 269
MsG0280009167.01.T01 AT1G48230 47.059 272 130 4 26 296 1 259 1.33e-78 241
MsG0280009167.01.T01 AT1G53660 41.869 289 153 6 1 286 20 296 1.52e-70 220
MsG0280009167.01.T01 AT1G53660 42.652 279 150 5 1 276 54 325 2.92e-70 221
MsG0280009167.01.T01 AT1G53660 42.446 278 152 4 1 276 72 343 4.81e-70 221
MsG0280009167.01.T01 AT3G14410 41.781 292 165 3 1 290 52 340 5.17e-68 215
MsG0280009167.01.T01 AT1G53660 42.194 237 130 3 41 276 1 231 3.15e-58 187
MsG0280009167.01.T01 AT1G53660 44.516 155 85 1 1 154 72 226 6.28e-42 145
MsG0280009167.01.T01 AT3G11320 31.418 261 171 3 1 255 46 304 3.40e-27 108
MsG0280009167.01.T01 AT5G05820 31.801 261 170 3 1 255 46 304 1.09e-26 107
MsG0280009167.01.T01 AT1G21870 27.059 255 177 4 7 255 55 306 1.56e-26 107
MsG0280009167.01.T01 AT1G77610 24.409 254 185 3 7 255 49 300 5.41e-22 94.7
MsG0280009167.01.T01 AT5G04160 30.268 261 174 4 1 255 47 305 3.62e-21 91.7
MsG0280009167.01.T01 AT3G10290 29.119 261 177 3 1 255 93 351 8.39e-21 91.7
MsG0280009167.01.T01 AT1G12500 28.517 263 176 8 1 255 94 352 6.06e-20 89.4
MsG0280009167.01.T01 AT2G28315 28.464 267 177 7 32 290 72 332 3.40e-19 86.7
MsG0280009167.01.T01 AT2G28315 29.876 241 155 7 32 264 72 306 5.71e-17 80.1
MsG0280009167.01.T01 AT1G06470 25.000 276 197 4 24 289 137 412 7.15e-16 77.8
MsG0280009167.01.T01 AT1G06470 25.000 276 197 4 24 289 137 412 7.15e-16 77.8
MsG0280009167.01.T01 AT1G06470 25.000 276 197 4 24 289 137 412 7.15e-16 77.8
MsG0280009167.01.T01 AT1G06470 25.000 276 197 4 24 289 137 412 7.15e-16 77.8
MsG0280009167.01.T01 AT2G30460 25.660 265 178 8 33 286 52 308 1.03e-15 76.6
MsG0280009167.01.T01 AT2G30460 25.660 265 178 8 33 286 52 308 1.03e-15 76.6
MsG0280009167.01.T01 AT2G30460 25.660 265 178 8 33 286 52 308 1.03e-15 76.6
MsG0280009167.01.T01 AT2G30460 25.660 265 178 8 33 286 73 329 1.51e-15 76.6
MsG0280009167.01.T01 AT2G30460 25.660 265 178 8 33 286 73 329 1.51e-15 76.6
MsG0280009167.01.T01 AT1G06890 24.662 296 193 10 4 286 51 329 5.73e-15 74.7
MsG0280009167.01.T01 AT1G06890 24.662 296 193 10 4 286 51 329 5.91e-15 74.7
MsG0280009167.01.T01 AT1G06890 24.662 296 193 10 4 286 51 329 5.91e-15 74.7
MsG0280009167.01.T01 AT1G06890 24.662 296 193 10 4 286 51 329 5.93e-15 74.7

Find 65 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAGGGACCACTGATTTA+AGG 0.269325 2:+46791743 None:intergenic
GTGTCTAAAGACATTGAAAT+TGG 0.278188 2:+46791769 None:intergenic
CTACATTGCTCCTTGTTGTT+TGG 0.286555 2:-46791389 MsG0280009167.01.T01:CDS
CACTTTACTCTCTCTCCCTT+TGG 0.307500 2:-46791717 MsG0280009167.01.T01:CDS
CTGTAAGTTGGTGGCACTTA+AGG 0.314139 2:-46791077 MsG0280009167.01.T01:CDS
GTTACACCACTCAATTTGAT+TGG 0.352660 2:-46791139 MsG0280009167.01.T01:CDS
ATGTAGTAAAGCGAGGTAAT+AGG 0.380132 2:+46791406 None:intergenic
CCGTGGCCGTTTACTCCATC+GGG 0.382958 2:-46791630 MsG0280009167.01.T01:CDS
CTTCTGAGGCACAAAAGATC+AGG 0.389412 2:-46791054 MsG0280009167.01.T01:CDS
CCACTCAATTTGATTGGTTA+CGG 0.390085 2:-46791133 MsG0280009167.01.T01:CDS
AGAGAGTAAAGTGCACCAAT+AGG 0.413183 2:+46791727 None:intergenic
GAAGCCAAGTTTGATGTCTT+TGG 0.416149 2:-46791520 MsG0280009167.01.T01:CDS
CTTAAATCAGTGGTCCCTAT+TGG 0.416269 2:-46791742 MsG0280009167.01.T01:CDS
GGCGTCGCTGTAGCTGCTTA+TGG 0.425466 2:-46791544 MsG0280009167.01.T01:CDS
TTCCTCCCTTGCTTACATCC+TGG 0.426272 2:-46791815 MsG0280009167.01.T01:CDS
GCTTTGACGATGAATGTTGC+TGG 0.428804 2:-46791217 MsG0280009167.01.T01:CDS
CCCGTGGCCGTTTACTCCAT+CGG 0.429181 2:-46791631 MsG0280009167.01.T01:CDS
TTCTGAGGCTGGGAAATTGT+TGG 0.436034 2:-46791014 MsG0280009167.01.T01:CDS
GTACAAGGAAGAATGAGAAT+AGG 0.438911 2:-46790961 MsG0280009167.01.T01:CDS
TTATTATAATCACTGTAAGT+TGG 0.439379 2:-46791089 MsG0280009167.01.T01:CDS
TTGCTGGTGTTGTGAAGGAT+TGG 0.445415 2:-46791201 MsG0280009167.01.T01:CDS
AATAGAAACCATGTTGATCA+TGG 0.447620 2:+46791573 None:intergenic
ACAAAAGATCAGGGTTCAGC+AGG 0.447972 2:-46791044 MsG0280009167.01.T01:CDS
AGAAACCCCGATGGAGTAAA+CGG 0.448902 2:+46791624 None:intergenic
CAGGAAGAAGATTCTGAGGC+TGG 0.457100 2:-46791025 MsG0280009167.01.T01:CDS
GTCGTTTCCTTGGTTCGTCA+TGG 0.465506 2:-46791359 MsG0280009167.01.T01:CDS
CTACTTTGAAGATGTTTACC+AGG 0.481564 2:+46791797 None:intergenic
GAGAGTAAAGTGCACCAATA+GGG 0.484061 2:+46791728 None:intergenic
TGTCTAAAGACATTGAAATT+GGG 0.487670 2:+46791770 None:intergenic
TGGTGTTACGCTGCAGCTCA+TGG 0.494202 2:-46791500 MsG0280009167.01.T01:CDS
AAGCAGAGTTTGAGAACCAA+AGG 0.502361 2:+46791701 None:intergenic
TCATGGAGTATCCTTTGTTG+AGG 0.511788 2:-46791342 MsG0280009167.01.T01:CDS
GTAAGCAAGGGAGGAACAAA+AGG 0.515623 2:+46791822 None:intergenic
AACACCAAAGACATCAAACT+TGG 0.526425 2:+46791516 None:intergenic
AATTGTTGGAAGAGAGAGAT+GGG 0.526474 2:-46791000 MsG0280009167.01.T01:CDS
AGCAGAGTTTGAGAACCAAA+GGG 0.539050 2:+46791702 None:intergenic
TTATAATCACTGTAAGTTGG+TGG 0.541314 2:-46791086 MsG0280009167.01.T01:CDS
TTTGCTTGTTGGGAAGACTT+CGG 0.544452 2:-46791239 MsG0280009167.01.T01:CDS
AACATGGTTTCTATTTCACT+TGG 0.552950 2:-46791565 MsG0280009167.01.T01:CDS
CATGGAGTATCCTTTGTTGA+GGG 0.562243 2:-46791341 MsG0280009167.01.T01:CDS
AGCGTTTGAAGCCACGAGGT+TGG 0.575373 2:-46791473 MsG0280009167.01.T01:CDS
TGTTTACCAGGATGTAAGCA+AGG 0.576359 2:+46791809 None:intergenic
GGTGGCACTTAAGGCTTCTG+AGG 0.577244 2:-46791068 MsG0280009167.01.T01:CDS
CCGATGGAGTAAACGGCCAC+GGG 0.579247 2:+46791631 None:intergenic
CCCGATGGAGTAAACGGCCA+CGG 0.582072 2:+46791630 None:intergenic
AGGAAGAAGATTCTGAGGCT+GGG 0.583941 2:-46791024 MsG0280009167.01.T01:CDS
GAATGTTGCTGGTGTTGTGA+AGG 0.593106 2:-46791206 MsG0280009167.01.T01:CDS
AAATTGTTGGAAGAGAGAGA+TGG 0.605714 2:-46791001 MsG0280009167.01.T01:CDS
TTCTGAGGCACAAAAGATCA+GGG 0.610985 2:-46791053 MsG0280009167.01.T01:CDS
CTTGCTTTATCCCTCAACAA+AGG 0.614249 2:+46791331 None:intergenic
AAGATGATGAAGAAAGTACA+AGG 0.615370 2:-46790976 MsG0280009167.01.T01:CDS
TTGAATTAAAACCAACCTCG+TGG 0.618109 2:+46791462 None:intergenic
GGATACTCCATGACGAACCA+AGG 0.620318 2:+46791352 None:intergenic
TACCAGGATGTAAGCAAGGG+AGG 0.621865 2:+46791813 None:intergenic
AGACACATACCTTAAATCAG+TGG 0.633020 2:-46791752 MsG0280009167.01.T01:CDS
GCTAAAAGCTCTTATGCCCG+TGG 0.637331 2:-46791647 MsG0280009167.01.T01:CDS
CCGTAACCAATCAAATTGAG+TGG 0.639422 2:+46791133 None:intergenic
TCAGCAGGAAGAAGATTCTG+AGG 0.650356 2:-46791029 MsG0280009167.01.T01:CDS
GTTTACCAGGATGTAAGCAA+GGG 0.658021 2:+46791810 None:intergenic
AGGAGCAATGTAGTAAAGCG+AGG 0.670002 2:+46791399 None:intergenic
AAAAGAAACCATGATCAACA+TGG 0.670931 2:-46791581 MsG0280009167.01.T01:CDS
GGGAGGAACAAAAGGCCATG+TGG 0.678631 2:+46791830 None:intergenic
CTGTAGCGTTTGAAGCCACG+AGG 0.681815 2:-46791477 MsG0280009167.01.T01:CDS
CGTGGCCGTTTACTCCATCG+GGG 0.684600 2:-46791629 MsG0280009167.01.T01:CDS
ATCACTAACAATGATCCACA+TGG 0.695115 2:-46791845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATAATCACTGTAAGT+TGG - Chr2:46791701-46791720 MsG0280009167.01.T01:CDS 20.0%
!!! AAGTTTGAGTTTTGATTTTT+GGG - Chr2:46791479-46791498 MsG0280009167.01.T01:CDS 20.0%
! TGTCTAAAGACATTGAAATT+GGG + Chr2:46791023-46791042 None:intergenic 25.0%
!! AAATTCTTTTGAACTCGAAA+GGG - Chr2:46791349-46791368 MsG0280009167.01.T01:CDS 25.0%
!!! AGTTTTGATTTTTGGGTTTT+TGG - Chr2:46791486-46791505 MsG0280009167.01.T01:CDS 25.0%
!!! CAAGTTTGAGTTTTGATTTT+TGG - Chr2:46791478-46791497 MsG0280009167.01.T01:CDS 25.0%
AAAAGAAACCATGATCAACA+TGG - Chr2:46791209-46791228 MsG0280009167.01.T01:CDS 30.0%
AACATGGTTTCTATTTCACT+TGG - Chr2:46791225-46791244 MsG0280009167.01.T01:CDS 30.0%
AATAGAAACCATGTTGATCA+TGG + Chr2:46791220-46791239 None:intergenic 30.0%
GACAAAAAAACCAAACAACA+AGG + Chr2:46791414-46791433 None:intergenic 30.0%
GTGTCTAAAGACATTGAAAT+TGG + Chr2:46791024-46791043 None:intergenic 30.0%
! AAGATGATGAAGAAAGTACA+AGG - Chr2:46791814-46791833 MsG0280009167.01.T01:CDS 30.0%
! CAAATTCTTTTGAACTCGAA+AGG - Chr2:46791348-46791367 MsG0280009167.01.T01:CDS 30.0%
! TTATAATCACTGTAAGTTGG+TGG - Chr2:46791704-46791723 MsG0280009167.01.T01:CDS 30.0%
! TTTTTCTTGGTCTGTGATTA+AGG - Chr2:46791623-46791642 MsG0280009167.01.T01:CDS 30.0%
!!! TTTTTTAAAAGAAACCCCGA+TGG + Chr2:46791178-46791197 None:intergenic 30.0%
AAATTGTTGGAAGAGAGAGA+TGG - Chr2:46791789-46791808 MsG0280009167.01.T01:CDS 35.0%
AACACCAAAGACATCAAACT+TGG + Chr2:46791277-46791296 None:intergenic 35.0%
AATTGTTGGAAGAGAGAGAT+GGG - Chr2:46791790-46791809 MsG0280009167.01.T01:CDS 35.0%
AGACACATACCTTAAATCAG+TGG - Chr2:46791038-46791057 MsG0280009167.01.T01:CDS 35.0%
ATGTAGTAAAGCGAGGTAAT+AGG + Chr2:46791387-46791406 None:intergenic 35.0%
GTACAAGGAAGAATGAGAAT+AGG - Chr2:46791829-46791848 MsG0280009167.01.T01:CDS 35.0%
GTTACACCACTCAATTTGAT+TGG - Chr2:46791651-46791670 MsG0280009167.01.T01:CDS 35.0%
TTGAATTAAAACCAACCTCG+TGG + Chr2:46791331-46791350 None:intergenic 35.0%
! CCACTCAATTTGATTGGTTA+CGG - Chr2:46791657-46791676 MsG0280009167.01.T01:CDS 35.0%
! CTACTTTGAAGATGTTTACC+AGG + Chr2:46790996-46791015 None:intergenic 35.0%
!! TTGCTGTGTTTTTGCTTGTT+GGG - Chr2:46791541-46791560 MsG0280009167.01.T01:CDS 35.0%
!!! GGTTGCTTATTGCTTTTTCT+TGG - Chr2:46791610-46791629 MsG0280009167.01.T01:CDS 35.0%
!!! TGGTTTTTTTGTCGTTTCCT+TGG - Chr2:46791421-46791440 MsG0280009167.01.T01:CDS 35.0%
AAGCAGAGTTTGAGAACCAA+AGG + Chr2:46791092-46791111 None:intergenic 40.0%
AGAGAGTAAAGTGCACCAAT+AGG + Chr2:46791066-46791085 None:intergenic 40.0%
AGCAGAGTTTGAGAACCAAA+GGG + Chr2:46791091-46791110 None:intergenic 40.0%
CAACAAGCAAAAACACAGCA+AGG + Chr2:46791542-46791561 None:intergenic 40.0%
CCGTAACCAATCAAATTGAG+TGG + Chr2:46791660-46791679 None:intergenic 40.0%
CTTAAATCAGTGGTCCCTAT+TGG - Chr2:46791048-46791067 MsG0280009167.01.T01:CDS 40.0%
CTTGCTTTATCCCTCAACAA+AGG + Chr2:46791462-46791481 None:intergenic 40.0%
GAAGCCAAGTTTGATGTCTT+TGG - Chr2:46791270-46791289 MsG0280009167.01.T01:CDS 40.0%
GAGAGTAAAGTGCACCAATA+GGG + Chr2:46791065-46791084 None:intergenic 40.0%
GTTTACCAGGATGTAAGCAA+GGG + Chr2:46790983-46791002 None:intergenic 40.0%
TGTTTACCAGGATGTAAGCA+AGG + Chr2:46790984-46791003 None:intergenic 40.0%
! CATGGAGTATCCTTTGTTGA+GGG - Chr2:46791449-46791468 MsG0280009167.01.T01:CDS 40.0%
! GGTTACGGACTTGCATTTTT+GGG - Chr2:46791672-46791691 MsG0280009167.01.T01:CDS 40.0%
! GTTACGGACTTGCATTTTTG+GGG - Chr2:46791673-46791692 MsG0280009167.01.T01:CDS 40.0%
! TCATGGAGTATCCTTTGTTG+AGG - Chr2:46791448-46791467 MsG0280009167.01.T01:CDS 40.0%
! TGGTTACGGACTTGCATTTT+TGG - Chr2:46791671-46791690 MsG0280009167.01.T01:CDS 40.0%
! TTTGCTTGTTGGGAAGACTT+CGG - Chr2:46791551-46791570 MsG0280009167.01.T01:CDS 40.0%
!! CAATAGGGACCACTGATTTA+AGG + Chr2:46791050-46791069 None:intergenic 40.0%
!! CTACATTGCTCCTTGTTGTT+TGG - Chr2:46791401-46791420 MsG0280009167.01.T01:CDS 40.0%
!! CTTGCTGTGTTTTTGCTTGT+TGG - Chr2:46791540-46791559 MsG0280009167.01.T01:CDS 40.0%
!! TTACGGACTTGCATTTTTGG+GGG - Chr2:46791674-46791693 MsG0280009167.01.T01:CDS 40.0%
!! TTCTGAGGCACAAAAGATCA+GGG - Chr2:46791737-46791756 MsG0280009167.01.T01:CDS 40.0%
ACAAAAGATCAGGGTTCAGC+AGG - Chr2:46791746-46791765 MsG0280009167.01.T01:CDS 45.0%
AGAAACCCCGATGGAGTAAA+CGG + Chr2:46791169-46791188 None:intergenic 45.0%
AGGAGCAATGTAGTAAAGCG+AGG + Chr2:46791394-46791413 None:intergenic 45.0%
CACTTTACTCTCTCTCCCTT+TGG - Chr2:46791073-46791092 MsG0280009167.01.T01:CDS 45.0%
GCTTTGACGATGAATGTTGC+TGG - Chr2:46791573-46791592 MsG0280009167.01.T01:CDS 45.0%
GTAAGCAAGGGAGGAACAAA+AGG + Chr2:46790971-46790990 None:intergenic 45.0%
TCAGCAGGAAGAAGATTCTG+AGG - Chr2:46791761-46791780 MsG0280009167.01.T01:CDS 45.0%
!! AGGAAGAAGATTCTGAGGCT+GGG - Chr2:46791766-46791785 MsG0280009167.01.T01:CDS 45.0%
!! CTGTAAGTTGGTGGCACTTA+AGG - Chr2:46791713-46791732 MsG0280009167.01.T01:CDS 45.0%
!! CTTCTGAGGCACAAAAGATC+AGG - Chr2:46791736-46791755 MsG0280009167.01.T01:CDS 45.0%
!! GAATGTTGCTGGTGTTGTGA+AGG - Chr2:46791584-46791603 MsG0280009167.01.T01:CDS 45.0%
!! TTCTGAGGCTGGGAAATTGT+TGG - Chr2:46791776-46791795 MsG0280009167.01.T01:CDS 45.0%
!! TTGCTGGTGTTGTGAAGGAT+TGG - Chr2:46791589-46791608 MsG0280009167.01.T01:CDS 45.0%
GCTAAAAGCTCTTATGCCCG+TGG - Chr2:46791143-46791162 MsG0280009167.01.T01:CDS 50.0%
GGATACTCCATGACGAACCA+AGG + Chr2:46791441-46791460 None:intergenic 50.0%
TACCAGGATGTAAGCAAGGG+AGG + Chr2:46790980-46790999 None:intergenic 50.0%
TTCCTCCCTTGCTTACATCC+TGG - Chr2:46790975-46790994 MsG0280009167.01.T01:CDS 50.0%
! GTCGTTTCCTTGGTTCGTCA+TGG - Chr2:46791431-46791450 MsG0280009167.01.T01:CDS 50.0%
!! CAGGAAGAAGATTCTGAGGC+TGG - Chr2:46791765-46791784 MsG0280009167.01.T01:CDS 50.0%
GGGAGGAACAAAAGGCCATG+TGG + Chr2:46790963-46790982 None:intergenic 55.0%
GGTGGCACTTAAGGCTTCTG+AGG - Chr2:46791722-46791741 MsG0280009167.01.T01:CDS 55.0%
! AGCGTTTGAAGCCACGAGGT+TGG - Chr2:46791317-46791336 MsG0280009167.01.T01:CDS 55.0%
! CTGTAGCGTTTGAAGCCACG+AGG - Chr2:46791313-46791332 MsG0280009167.01.T01:CDS 55.0%
!! TGGTGTTACGCTGCAGCTCA+TGG - Chr2:46791290-46791309 MsG0280009167.01.T01:CDS 55.0%
CCCGATGGAGTAAACGGCCA+CGG + Chr2:46791163-46791182 None:intergenic 60.0%
CCCGTGGCCGTTTACTCCAT+CGG - Chr2:46791159-46791178 MsG0280009167.01.T01:CDS 60.0%
CCGATGGAGTAAACGGCCAC+GGG + Chr2:46791162-46791181 None:intergenic 60.0%
CCGTGGCCGTTTACTCCATC+GGG - Chr2:46791160-46791179 MsG0280009167.01.T01:CDS 60.0%
CGTGGCCGTTTACTCCATCG+GGG - Chr2:46791161-46791180 MsG0280009167.01.T01:CDS 60.0%
GGCGTCGCTGTAGCTGCTTA+TGG - Chr2:46791246-46791265 MsG0280009167.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 46790955 46791857 46790955 ID=MsG0280009167.01;Name=MsG0280009167.01
Chr2 mRNA 46790955 46791857 46790955 ID=MsG0280009167.01.T01;Parent=MsG0280009167.01;Name=MsG0280009167.01.T01;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|300
Chr2 exon 46790955 46791857 46790955 ID=MsG0280009167.01.T01:exon:36802;Parent=MsG0280009167.01.T01
Chr2 CDS 46790955 46791857 46790955 ID=MsG0280009167.01.T01:cds;Parent=MsG0280009167.01.T01
Gene Sequence

>MsG0280009167.01.T01

ATGATCCACATGGCCTTTTGTTCCTCCCTTGCTTACATCCTGGTAAACATCTTCAAAGTAGTTGACCCAATTTCAATGTCTTTAGACACATACCTTAAATCAGTGGTCCCTATTGGTGCACTTTACTCTCTCTCCCTTTGGTTCTCAAACTCTGCTTATATTTATTTGTCAGTTTCTTTCATTCAAATGCTAAAAGCTCTTATGCCCGTGGCCGTTTACTCCATCGGGGTTTCTTTTAAAAAAGAGTCGTTTAAAAAAGAAACCATGATCAACATGGTTTCTATTTCACTTGGCGTCGCTGTAGCTGCTTATGGCGAAGCCAAGTTTGATGTCTTTGGTGTTACGCTGCAGCTCATGGCTGTAGCGTTTGAAGCCACGAGGTTGGTTTTAATTCAAATTCTTTTGAACTCGAAAGGGATTAAGTTGAATCCTATTACCTCGCTTTACTACATTGCTCCTTGTTGTTTGGTTTTTTTGTCGTTTCCTTGGTTCGTCATGGAGTATCCTTTGTTGAGGGATAAAGCAAGTTTGAGTTTTGATTTTTGGGTTTTTGGAAGTAATTCGTTGTGTGCTTTTGCTTTGAACCTTGCTGTGTTTTTGCTTGTTGGGAAGACTTCGGCTTTGACGATGAATGTTGCTGGTGTTGTGAAGGATTGGTTGCTTATTGCTTTTTCTTGGTCTGTGATTAAGGATACTGTTACACCACTCAATTTGATTGGTTACGGACTTGCATTTTTGGGGGTTGCTTATTATAATCACTGTAAGTTGGTGGCACTTAAGGCTTCTGAGGCACAAAAGATCAGGGTTCAGCAGGAAGAAGATTCTGAGGCTGGGAAATTGTTGGAAGAGAGAGATGGGAAAGATGATGAAGAAAGTACAAGGAAGAATGAGAATAGGAATTGA

Protein sequence

>MsG0280009167.01.T01

MIHMAFCSSLAYILVNIFKVVDPISMSLDTYLKSVVPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVSFKKESFKKETMINMVSISLGVAVAAYGEAKFDVFGVTLQLMAVAFEATRLVLIQILLNSKGIKLNPITSLYYIAPCCLVFLSFPWFVMEYPLLRDKASLSFDFWVFGSNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPLNLIGYGLAFLGVAYYNHCKLVALKASEAQKIRVQQEEDSEAGKLLEERDGKDDEESTRKNENRN*