AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780035953.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035953.01.T01 MTR_7g005940 88.739 1110 53 3 1 1075 1 1073 0.0 1952
MsG0780035953.01.T01 MTR_7g005940 91.401 1035 53 2 1 1000 1 1034 0.0 1889
MsG0780035953.01.T01 MTR_4g083620 41.778 225 121 6 195 410 98 321 8.46e-43 160
MsG0780035953.01.T01 MTR_2g028940 35.448 268 137 9 165 422 41 282 1.39e-32 136
MsG0780035953.01.T01 MTR_2g028940 35.448 268 137 9 165 422 41 282 3.37e-32 135
MsG0780035953.01.T01 MTR_2g028940 30.387 362 237 6 643 1001 558 907 5.61e-30 129
MsG0780035953.01.T01 MTR_2g028940 35.448 268 137 9 165 422 41 282 3.76e-32 135
MsG0780035953.01.T01 MTR_2g028940 31.230 317 210 4 688 1001 596 907 5.74e-30 129
MsG0780035953.01.T01 MTR_1g090320 29.900 301 198 7 701 996 854 1146 4.41e-23 107
MsG0780035953.01.T01 MTR_1g090320 48.101 79 41 0 597 675 514 592 8.60e-20 96.3
MsG0780035953.01.T01 MTR_1g090320 26.141 241 137 5 200 405 15 249 4.74e-14 77.8
MsG0780035953.01.T01 MTR_1g090320 29.900 301 198 7 701 996 856 1148 4.69e-23 107
MsG0780035953.01.T01 MTR_1g090320 48.101 79 41 0 597 675 516 594 8.83e-20 96.3
MsG0780035953.01.T01 MTR_1g090320 26.141 241 137 5 200 405 17 251 4.78e-14 77.8
MsG0780035953.01.T01 MTR_8g103227 52.000 75 36 0 590 664 389 463 6.71e-20 96.7
MsG0780035953.01.T01 MTR_8g103227 26.421 299 210 7 701 996 701 992 1.18e-15 82.8
MsG0780035953.01.T01 MTR_5g034440 33.333 120 65 3 599 705 283 400 3.72e-15 80.9
MsG0780035953.01.T01 MTR_7g059405 35.938 128 65 5 537 663 219 330 9.84e-15 79.3
MsG0780035953.01.T01 MTR_4g107010 30.286 175 101 6 597 755 281 450 1.74e-13 75.5
MsG0780035953.01.T01 MTR_7g078330 42.169 83 44 2 581 663 262 340 1.41e-12 72.4
MsG0780035953.01.T01 MTR_7g117890 36.697 109 57 3 598 697 257 362 1.83e-12 72.4
MsG0780035953.01.T01 MTR_4g063800 39.437 71 42 1 593 663 252 321 3.75e-12 70.9
MsG0780035953.01.T01 MTR_3g096370 44.286 70 36 2 595 663 9 76 5.05e-12 69.7
MsG0780035953.01.T01 MTR_4g485520 30.409 171 93 6 596 749 105 266 1.56e-11 68.6
MsG0780035953.01.T01 MTR_7g053260 40.580 69 40 1 595 663 77 144 1.62e-11 68.6
MsG0780035953.01.T01 MTR_4g485520 30.409 171 93 6 596 749 273 434 1.86e-11 68.6
MsG0780035953.01.T01 MTR_5g077510 41.429 70 38 2 595 663 34 101 2.47e-11 67.8
MsG0780035953.01.T01 MTR_4g085720 43.478 69 36 2 596 663 14 80 2.64e-11 67.4
MsG0780035953.01.T01 MTR_2g018010 35.870 92 55 3 575 665 272 360 4.23e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035953.01.T01 AT1G23030 23.263 331 222 9 595 918 240 545 1.14e-12 72.8
MsG0780035953.01.T01 AT1G76390 38.384 99 50 3 586 679 20 112 2.74e-12 71.6
MsG0780035953.01.T01 AT1G76390 38.384 99 50 3 586 679 20 112 2.74e-12 71.6
MsG0780035953.01.T01 AT5G42340 30.058 173 118 3 584 755 278 448 4.06e-12 70.9
MsG0780035953.01.T01 AT1G68940 38.053 113 49 6 565 664 265 369 1.69e-11 69.3
MsG0780035953.01.T01 AT1G68940 38.053 113 49 6 565 664 265 369 1.72e-11 69.3
MsG0780035953.01.T01 AT1G68940 38.053 113 49 6 565 664 212 316 1.98e-11 68.9
MsG0780035953.01.T01 AT3G07360 40.580 69 40 1 595 663 73 140 4.25e-11 67.0
MsG0780035953.01.T01 AT1G20780 38.202 89 49 2 596 679 23 110 4.66e-11 67.8
MsG0780035953.01.T01 AT1G20780 38.202 89 49 2 596 679 23 110 4.66e-11 67.8
MsG0780035953.01.T01 AT1G20780 38.202 89 49 2 596 679 23 110 4.66e-11 67.8

Find 152 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTCATTATACACTTTC+TGG 0.079952 7:+472825 None:intergenic
ATAGTAGGGGTTATCTTATT+TGG 0.182015 7:+471904 None:intergenic
CGATCAAACGCTTCAAAATA+AGG 0.183245 7:+471588 None:intergenic
ATGGACTAGTTGATGTATTA+TGG 0.202999 7:-469134 MsG0780035953.01.T01:CDS
AAACTTTATGATTCTTTCTT+TGG 0.229672 7:-472456 MsG0780035953.01.T01:CDS
AGTATAAATGGCTTCATCTT+TGG 0.231855 7:-473983 None:intergenic
ACTGTTTAAATTAGTTTCTA+TGG 0.282515 7:+471987 None:intergenic
AAGTGATCCTCTTCACTCTT+TGG 0.296475 7:-473878 MsG0780035953.01.T01:CDS
TTCAACTTCAGTAAAATATC+AGG 0.299538 7:-469666 MsG0780035953.01.T01:CDS
TTGCTTTATATTACAAAGAT+TGG 0.314400 7:-472781 MsG0780035953.01.T01:CDS
TATAATGAAAGTTTGGATTC+AGG 0.314769 7:-472815 MsG0780035953.01.T01:CDS
GAGGTTTGAACAAGGAAATT+TGG 0.318367 7:-471364 MsG0780035953.01.T01:CDS
ATGCAGCTTAGCATTATTAC+TGG 0.324069 7:-473148 MsG0780035953.01.T01:CDS
AAAGGTTTGACCTGACTCTA+AGG 0.329503 7:+471706 None:intergenic
GATATTGCTCCCCTTCTTCA+TGG 0.330057 7:-469153 MsG0780035953.01.T01:CDS
GAAAGTGTATAATGAAAGTT+TGG 0.337823 7:-472822 MsG0780035953.01.T01:CDS
GATATTGTTGCCTGAACTTT+GGG 0.343487 7:-472954 MsG0780035953.01.T01:CDS
AACTGTGAGAGAGGTTCTTA+TGG 0.343570 7:-472378 MsG0780035953.01.T01:CDS
TTCAAAATAAGGTTGCTAAA+TGG 0.346748 7:+471599 None:intergenic
CAGATTCTCCCTATACAAAA+TGG 0.348155 7:+469092 None:intergenic
GGAAGATGAAGAAGAAGAAA+TGG 0.363565 7:-469955 MsG0780035953.01.T01:CDS
AAGAAAGCAGGTTATAATAA+TGG 0.369011 7:-470166 MsG0780035953.01.T01:CDS
TCTAAAGTATTTCCTGTTAC+CGG 0.369352 7:+471635 None:intergenic
AACTTTCTGATTTGAAGAAA+TGG 0.370655 7:-472913 MsG0780035953.01.T01:CDS
CAAAGAAAAGAAGGAACAAT+TGG 0.374214 7:-473593 MsG0780035953.01.T01:CDS
TGACCTGACTCTAAGGTAAC+TGG 0.378146 7:+471713 None:intergenic
CGATATTGTTGCCTGAACTT+TGG 0.378191 7:-472955 MsG0780035953.01.T01:CDS
CTTATTACACTTTGAACTAC+TGG 0.379975 7:-470661 MsG0780035953.01.T01:intron
AAGATAACCCCTACTATTGA+TGG 0.384414 7:-471898 MsG0780035953.01.T01:intron
CACTTCTTTCATAAGTGGCT+TGG 0.399869 7:-470772 MsG0780035953.01.T01:CDS
AACAGAACATGTCCGGTAAC+AGG 0.401864 7:-471647 MsG0780035953.01.T01:CDS
CTTCAGTAAAATATCAGGTT+TGG 0.408794 7:-469661 MsG0780035953.01.T01:CDS
GGGTTCTTTCGTTTCTCTGT+AGG 0.417240 7:-471386 MsG0780035953.01.T01:CDS
ATAACCTGCTTTCTTTAAGA+TGG 0.427114 7:+470174 None:intergenic
AATTCATCAGATAGTGATAG+TGG 0.427587 7:-473661 MsG0780035953.01.T01:CDS
AGAAATGGATGAAGAGTTCA+TGG 0.427897 7:-469940 MsG0780035953.01.T01:CDS
AATTCATGAACTGGTACTCT+TGG 0.428025 7:+472276 None:intergenic
CATCAAGGCATGGTTTCAAA+AGG 0.431872 7:-471672 MsG0780035953.01.T01:CDS
TCTTGAGCTTCTTCACAGTA+AGG 0.432710 7:-471244 MsG0780035953.01.T01:CDS
AAGAAAACTAACCGACGAAA+TGG 0.434545 7:+470087 None:intergenic
AAAGAAAAGAAGGAACAATT+GGG 0.435116 7:-473592 MsG0780035953.01.T01:CDS
TTCTTTCATAAGTGGCTTGG+TGG 0.436399 7:-470769 MsG0780035953.01.T01:CDS
TGAAGCGTTTGATCGATAAC+TGG 0.436744 7:-471580 MsG0780035953.01.T01:CDS
AATATCGTCCGCGCCTGAAA+AGG 0.442304 7:+472971 None:intergenic
GATGTCACTTCTTTCATAAG+TGG 0.443620 7:-470777 MsG0780035953.01.T01:CDS
ATAAATTCCTGTGGTATGCT+TGG 0.444770 7:+471767 None:intergenic
TCTGACAAGAAATATCTTTG+AGG 0.446797 7:-471738 MsG0780035953.01.T01:CDS
AATAGACGCTCCCAAAGTTC+AGG 0.451875 7:+472944 None:intergenic
AACCTTGTCATCATTTAAGC+TGG 0.455375 7:+470273 None:intergenic
CAAGGACAGCTGCAGAAGAA+TGG 0.461431 7:-472050 MsG0780035953.01.T01:CDS
CTTTCTAAACAGTATAATGC+TGG 0.465237 7:-469786 MsG0780035953.01.T01:CDS
AATGGAAACTAGTGCTTTCA+CGG 0.469991 7:+473381 None:intergenic
TTCTATGTATCCATTCAGAA+TGG 0.471459 7:+473363 None:intergenic
GCACTAGTTTCCATTCTGAA+TGG 0.474787 7:-473373 MsG0780035953.01.T01:CDS
AACTTGTTAGAATCAATGAT+TGG 0.475567 7:-469915 MsG0780035953.01.T01:CDS
AAAGAGAAGAATTCCAGAAA+TGG 0.476144 7:-472027 MsG0780035953.01.T01:CDS
TAATACCTGTCGACTCGTAA+TGG 0.478741 7:+472703 None:intergenic
CATCAACTAGTCCATGAAGA+AGG 0.482713 7:+469142 None:intergenic
CAAGTGTCTAATGTGAAAAG+AGG 0.484843 7:-473616 MsG0780035953.01.T01:CDS
GCCGTTGATCCTCTTCATCA+AGG 0.486422 7:+470119 None:intergenic
ATCTCCTAGCCTTGATGAAG+AGG 0.488093 7:-470128 MsG0780035953.01.T01:CDS
CTGAGAGATGATAGCTAAGA+AGG 0.488827 7:+469749 None:intergenic
TTTGAATTTCATTCAACTTG+AGG 0.494489 7:-473284 MsG0780035953.01.T01:CDS
ACCATTGCCTGTGGCGAGAA+TGG 0.494969 7:+472486 None:intergenic
GCTCAAGTTCTTCATTCTCA+AGG 0.497709 7:+469715 None:intergenic
AGCATATATGAATCCTTCAA+TGG 0.500188 7:+473562 None:intergenic
TCAAGATCTTCTTTCCATCA+TGG 0.500865 7:-473907 MsG0780035953.01.T01:CDS
CTTGTCTAATAACTGTTACA+TGG 0.501990 7:-469821 MsG0780035953.01.T01:CDS
ATTCCGATGGAAGGAATAGT+TGG 0.504559 7:+472737 None:intergenic
GTAGTTCAAAGTGTAATAAG+AGG 0.504871 7:+470664 None:intergenic
AGAATCTAAACATCTAGATA+TGG 0.504905 7:+469866 None:intergenic
GGTATATAGAATTCATGAAC+TGG 0.505922 7:+472267 None:intergenic
TCTTTCATAAGTGGCTTGGT+GGG 0.512051 7:-470768 MsG0780035953.01.T01:CDS
CTTTGAAAGAAAAGCCATCA+AGG 0.514152 7:-471687 MsG0780035953.01.T01:CDS
TTTGGAGCAGCTTCTTGCAC+AGG 0.514480 7:-473965 MsG0780035953.01.T01:CDS
TTCTTTCGTTTCTCTGTAGG+AGG 0.515913 7:-471383 MsG0780035953.01.T01:CDS
GAAAAGAGGCAAAGAAAAGA+AGG 0.518665 7:-473602 MsG0780035953.01.T01:CDS
GAACCAGTTACCTTAGAGTC+AGG 0.520909 7:-471716 MsG0780035953.01.T01:CDS
TCGAATTTCCACAGTTTGAG+AGG 0.527153 7:+471523 None:intergenic
ATTGCTTATCTGATATCTTG+AGG 0.529217 7:+473792 None:intergenic
TTATCACAAATAAACGGTGA+TGG 0.533604 7:+469636 None:intergenic
TCAAAGATATTTCTTGTCAG+AGG 0.534699 7:+471740 None:intergenic
ATCAACTAGTCCATGAAGAA+GGG 0.539153 7:+469143 None:intergenic
TCATTGACAAAAGTTCAGTA+AGG 0.539896 7:+471190 None:intergenic
TAATGACAGGGAAGTTCACT+TGG 0.540383 7:-472540 MsG0780035953.01.T01:intron
AGCAGCTTCTTGCACAGGAA+GGG 0.540666 7:-473960 MsG0780035953.01.T01:CDS
AAAGGGAAACAGAACATGTC+CGG 0.542373 7:-471654 MsG0780035953.01.T01:CDS
ACCATTCTCGCCACAGGCAA+TGG 0.544070 7:-472487 MsG0780035953.01.T01:CDS
CTCTGTAGGAGGTTTGAACA+AGG 0.545055 7:-471372 MsG0780035953.01.T01:CDS
GAGATGATAGCTAAGAAGGC+AGG 0.545629 7:+469753 None:intergenic
CGACTCGTAATGGATAATGA+TGG 0.548637 7:+472713 None:intergenic
ACTACCATCTTAAAGAAAGC+AGG 0.549148 7:-470178 MsG0780035953.01.T01:CDS
GGCATCAAGTGCCTCTGCAA+TGG 0.549842 7:+470294 None:intergenic
TAATAAGAGGACAGCGATGA+GGG 0.550715 7:+470677 None:intergenic
CTCAAGACTTGTAATCACCT+TGG 0.550915 7:+473243 None:intergenic
CTAGACATGTAGATTTGATG+AGG 0.555129 7:-469845 MsG0780035953.01.T01:CDS
GTTGCATATATAAGATAGCA+AGG 0.557196 7:-471287 MsG0780035953.01.T01:CDS
GCCTTGATGAAGAGGATCAA+CGG 0.558378 7:-470120 MsG0780035953.01.T01:CDS
ATCAAGGCATGGTTTCAAAA+GGG 0.559344 7:-471671 MsG0780035953.01.T01:CDS
TTAGAATCAATGATTGGTGA+TGG 0.561943 7:-469909 MsG0780035953.01.T01:CDS
CTCAAACTGTGGAAATTCGA+AGG 0.564786 7:-471520 MsG0780035953.01.T01:CDS
ATTATCCATTACGAGTCGAC+AGG 0.568253 7:-472708 MsG0780035953.01.T01:intron
AAAGAAAAGCCATCAAGGCA+TGG 0.569716 7:-471682 MsG0780035953.01.T01:CDS
ATTATACTGTTTAGAAAGTG+AGG 0.571728 7:+469791 None:intergenic
ACTTCAACTTCATAGACTTG+AGG 0.573701 7:+472426 None:intergenic
TAGACATGTAGATTTGATGA+GGG 0.575230 7:-469844 MsG0780035953.01.T01:CDS
ATTATTTGTTATCATTCCAG+TGG 0.576441 7:+470201 None:intergenic
TTGCATATATAAGATAGCAA+GGG 0.577003 7:-471286 MsG0780035953.01.T01:CDS
TGATCCTCTTCATCAAGGCT+AGG 0.580353 7:+470124 None:intergenic
AATAATATTTGACAGCGGAA+AGG 0.581020 7:-472078 MsG0780035953.01.T01:intron
CAACGAACCATTCTCGCCAC+AGG 0.582453 7:-472493 MsG0780035953.01.T01:CDS
AATGATGGAATTCCGATGGA+AGG 0.584929 7:+472728 None:intergenic
AGCTTTGAAAACTGTGAGAG+AGG 0.585518 7:-472387 MsG0780035953.01.T01:CDS
TACAAAGATTGGCTCAGTGA+AGG 0.585870 7:-472770 MsG0780035953.01.T01:CDS
GAGCAGCTTCTTGCACAGGA+AGG 0.586816 7:-473961 MsG0780035953.01.T01:CDS
GCTATCATCTCTCAGCTGAA+AGG 0.587912 7:-469741 MsG0780035953.01.T01:CDS
GGATAATGATGGAATTCCGA+TGG 0.588555 7:+472724 None:intergenic
CTATCTTCCAAAGAGTGAAG+AGG 0.591307 7:+473871 None:intergenic
GGAAACAAGTTAAATAACGA+AGG 0.597175 7:-473721 MsG0780035953.01.T01:CDS
GATCACTTGAATTACCATGA+TGG 0.601325 7:+473893 None:intergenic
ATATGCAACTAGAATCTGAT+CGG 0.602029 7:+471301 None:intergenic
ATATTCTCCAAGCATACCAC+AGG 0.604413 7:-471774 MsG0780035953.01.T01:CDS
TATATGCTTAGACAATTGAG+TGG 0.608616 7:-473547 MsG0780035953.01.T01:CDS
CAGGAAGGGTTCAAAGCAAG+CGG 0.609110 7:-473946 MsG0780035953.01.T01:CDS
TTTCTTACCATCAATAGTAG+GGG 0.612144 7:+471891 None:intergenic
TGCCAGCTTAAATGATGACA+AGG 0.619717 7:-470275 MsG0780035953.01.T01:CDS
GTTTAGCATATACATAGAGA+TGG 0.619765 7:-470326 MsG0780035953.01.T01:CDS
GAAACAAGTTAAATAACGAA+GGG 0.623558 7:-473720 MsG0780035953.01.T01:CDS
ACTCCAACTATTCCTTCCAT+CGG 0.626415 7:-472740 MsG0780035953.01.T01:CDS
AGAGCGCAATTCTGAGACCA+AGG 0.627342 7:-473260 MsG0780035953.01.T01:CDS
TGCATATATAAGATAGCAAG+GGG 0.634241 7:-471285 MsG0780035953.01.T01:CDS
TTTGAGAGGCAAAATCAAGA+AGG 0.635942 7:+471537 None:intergenic
GACACATATAATGAGACGGA+GGG 0.637757 7:+469566 None:intergenic
TCAACTAGTCCATGAAGAAG+GGG 0.638307 7:+469144 None:intergenic
GCTAAATGTAACCATTTCGT+CGG 0.644677 7:-470098 MsG0780035953.01.T01:intron
AAATGACACATATAATGAGA+CGG 0.651445 7:+469562 None:intergenic
CTGTGGCGAGAATGGTTCGT+TGG 0.657069 7:+472494 None:intergenic
GAAGAAATGGTATGACAACA+AGG 0.658330 7:-472900 MsG0780035953.01.T01:CDS
GACAGCGGAAAGGAACATCA+AGG 0.658940 7:-472068 MsG0780035953.01.T01:intron
AAGTTGAATGAAATTCAAAG+AGG 0.660155 7:+473288 None:intergenic
CAAGCGGCAGAAAAGTGCAA+AGG 0.663772 7:-473930 MsG0780035953.01.T01:CDS
GTAATAAGAGGACAGCGATG+AGG 0.664032 7:+470676 None:intergenic
TCAAAGAGGAGAAACAATTG+TGG 0.665172 7:+473302 None:intergenic
GGCTGTGAATGCCATTGCAG+AGG 0.666777 7:-470305 MsG0780035953.01.T01:CDS
CTATGAAGTTGAAGTTGATG+AGG 0.667707 7:-472418 MsG0780035953.01.T01:CDS
TCATGAATTCTATATACCTG+TGG 0.672643 7:-472262 MsG0780035953.01.T01:intron
AAGAAAAGAAGGAACAATTG+GGG 0.676981 7:-473591 MsG0780035953.01.T01:CDS
AGAAAAGAAGGAACAATTGG+GGG 0.678559 7:-473590 MsG0780035953.01.T01:CDS
AGAGGACAAATAAATTCCTG+TGG 0.684769 7:+471758 None:intergenic
AATAAGAGGACAGCGATGAG+GGG 0.685162 7:+470678 None:intergenic
TGACACATATAATGAGACGG+AGG 0.700368 7:+469565 None:intergenic
GGATCAAATATACAACACTG+AGG 0.761941 7:+473047 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAAAGACAAAA+AGG + Chr7:470840-470859 None:intergenic 10.0%
!!! TTCATTTTACATAAAATTTT+TGG - Chr7:471259-471278 MsG0780035953.01.T01:CDS 10.0%
!!! TTCTTTTGTTTTTTTTTTAA+TGG - Chr7:472996-473015 MsG0780035953.01.T01:CDS 10.0%
!! ACTAAAATATTCAAATTCAT+TGG - Chr7:473593-473612 MsG0780035953.01.T01:CDS 15.0%
!!! ACTATAAATAATTTTACTGT+AGG + Chr7:470891-470910 None:intergenic 15.0%
!!! AGATTTTTATCACAAATAAA+CGG + Chr7:473438-473457 None:intergenic 15.0%
!!! AGTGATAATAATGTTTTTAT+AGG - Chr7:469323-469342 MsG0780035953.01.T01:intron 15.0%
!!! TATTAATGTTTTTTTAACGA+TGG + Chr7:470718-470737 None:intergenic 15.0%
!! AAACTTTATGATTCTTTCTT+TGG - Chr7:470609-470628 MsG0780035953.01.T01:intron 20.0%
!! ATCGTAAAAAAGTTAATAAG+TGG - Chr7:473680-473699 MsG0780035953.01.T01:CDS 20.0%
!! ATTGAATTTCATTCATTGTT+TGG + Chr7:472656-472675 None:intergenic 20.0%
!! GATAAAAATCTTGCTAATTT+CGG - Chr7:473447-473466 MsG0780035953.01.T01:CDS 20.0%
!! TCATATCTATAAACTAGTAT+CGG + Chr7:473793-473812 None:intergenic 20.0%
!! TCATTTAGTTAAAAAATGAC+AGG - Chr7:473089-473108 MsG0780035953.01.T01:CDS 20.0%
!! TCTTTCGAAATATTATTTAC+TGG - Chr7:472242-472261 MsG0780035953.01.T01:intron 20.0%
!! TTGCTTTATATTACAAAGAT+TGG - Chr7:470284-470303 MsG0780035953.01.T01:CDS 20.0%
!!! AATAGTATTGCATTTTTTGT+TGG + Chr7:471855-471874 None:intergenic 20.0%
!!! ACTGTTTAAATTAGTTTCTA+TGG + Chr7:471081-471100 None:intergenic 20.0%
!!! ATACATAGAAAGTTTTCTAA+CGG - Chr7:469715-469734 MsG0780035953.01.T01:CDS 20.0%
!!! ATAGTATTGCATTTTTTGTT+GGG + Chr7:471854-471873 None:intergenic 20.0%
!!! CTATTTATTTTGTAGAAGAA+AGG - Chr7:472266-472285 MsG0780035953.01.T01:CDS 20.0%
!!! GTGAGATTTTTATCAAATTT+TGG - Chr7:471902-471921 MsG0780035953.01.T01:CDS 20.0%
!!! TTACATAAAATTTTTGGTGT+AGG - Chr7:471265-471284 MsG0780035953.01.T01:CDS 20.0%
!!! TTGTTATCTTCATTTTCTTA+TGG + Chr7:470455-470474 None:intergenic 20.0%
! AAAGAAAAGAAGGAACAATT+GGG - Chr7:469473-469492 MsG0780035953.01.T01:intron 25.0%
! AAAGTCTCTTTAACATTGAA+GGG + Chr7:472604-472623 None:intergenic 25.0%
! AAATGACACATATAATGAGA+CGG + Chr7:473506-473525 None:intergenic 25.0%
! AACTTTCATTATACACTTTC+TGG + Chr7:470243-470262 None:intergenic 25.0%
! AAGAAAGCAGGTTATAATAA+TGG - Chr7:472899-472918 MsG0780035953.01.T01:CDS 25.0%
! AAGTTGAATGAAATTCAAAG+AGG + Chr7:469780-469799 None:intergenic 25.0%
! AATATTCAAATTCATTGGAG+TGG - Chr7:473598-473617 MsG0780035953.01.T01:CDS 25.0%
! AGAATCTAAACATCTAGATA+TGG + Chr7:473202-473221 None:intergenic 25.0%
! ATAGACTGTTCAATATTTAG+AGG + Chr7:472549-472568 None:intergenic 25.0%
! ATATTTAAAGATCAAGTGAC+TGG - Chr7:472572-472591 MsG0780035953.01.T01:intron 25.0%
! ATTATACTGTTTAGAAAGTG+AGG + Chr7:473277-473296 None:intergenic 25.0%
! CAAATAGAGGTTATAAATAG+CGG - Chr7:472043-472062 MsG0780035953.01.T01:CDS 25.0%
! CCAAAGAAAAAAGAAAGTTT+CGG - Chr7:470039-470058 MsG0780035953.01.T01:intron 25.0%
! CTAAGCATATAATCTCTTTA+GGG - Chr7:471658-471677 MsG0780035953.01.T01:CDS 25.0%
! GAAACAAGTTAAATAACGAA+GGG - Chr7:469345-469364 MsG0780035953.01.T01:intron 25.0%
! GATATTCCAAAGTGAAAAAT+AGG - Chr7:473709-473728 MsG0780035953.01.T01:CDS 25.0%
! GTTATAAATAGCGGTTATAA+CGG - Chr7:472052-472071 MsG0780035953.01.T01:CDS 25.0%
! TAAGCATATAATCTCTTTAG+GGG - Chr7:471659-471678 MsG0780035953.01.T01:CDS 25.0%
! TATAATGAAAGTTTGGATTC+AGG - Chr7:470250-470269 MsG0780035953.01.T01:CDS 25.0%
! TTAGAGATAAAGTCAGTTAA+TGG + Chr7:470508-470527 None:intergenic 25.0%
! TTCAAAATAAGGTTGCTAAA+TGG + Chr7:471469-471488 None:intergenic 25.0%
! TTCAACTTCAGTAAAATATC+AGG - Chr7:473399-473418 MsG0780035953.01.T01:CDS 25.0%
! TTGATCGATAATGAATACAA+AGG - Chr7:470410-470429 MsG0780035953.01.T01:intron 25.0%
! TTGCATATATAAGATAGCAA+GGG - Chr7:471779-471798 MsG0780035953.01.T01:CDS 25.0%
! TTTGAATTTCATTCAACTTG+AGG - Chr7:469781-469800 MsG0780035953.01.T01:CDS 25.0%
!! AACTTTCTGATTTGAAGAAA+TGG - Chr7:470152-470171 MsG0780035953.01.T01:CDS 25.0%
!! ATGTATATGCTAAACTTTTG+AGG + Chr7:472734-472753 None:intergenic 25.0%
!! GAAAGTGTATAATGAAAGTT+TGG - Chr7:470243-470262 MsG0780035953.01.T01:CDS 25.0%
!! TATTTTACTGAAGTTGAACA+AGG + Chr7:473397-473416 None:intergenic 25.0%
!! TTTTCTTACCATCAATAGTA+GGG + Chr7:471178-471197 None:intergenic 25.0%
!! TTTTTCTTACCATCAATAGT+AGG + Chr7:471179-471198 None:intergenic 25.0%
!!! AAAATCCATTTGTTATCTGA+AGG + Chr7:471224-471243 None:intergenic 25.0%
!!! AACTTGTTAGAATCAATGAT+TGG - Chr7:473150-473169 MsG0780035953.01.T01:CDS 25.0%
!!! ATTATTTGTTATCATTCCAG+TGG + Chr7:472867-472886 None:intergenic 25.0%
!!! ATTTCATTTGCTTTTTCATG+TGG + Chr7:471122-471141 None:intergenic 25.0%
!!! CTCATTATATGTGTCATTTT+AGG - Chr7:473507-473526 MsG0780035953.01.T01:CDS 25.0%
!!! TAGTATTGCATTTTTTGTTG+GGG + Chr7:471853-471872 None:intergenic 25.0%
!!! TTGAGGTTGTTTTTATAAGA+GGG - Chr7:472507-472526 MsG0780035953.01.T01:CDS 25.0%
AAAGAGAAGAATTCCAGAAA+TGG - Chr7:471038-471057 MsG0780035953.01.T01:intron 30.0%
AAAGGTGAAATTATTACCAC+AGG + Chr7:470822-470841 None:intergenic 30.0%
AAGAAAAGAAGGAACAATTG+GGG - Chr7:469474-469493 MsG0780035953.01.T01:intron 30.0%
AATAATATTTGACAGCGGAA+AGG - Chr7:470987-471006 MsG0780035953.01.T01:intron 30.0%
AATTCATCAGATAGTGATAG+TGG - Chr7:469404-469423 MsG0780035953.01.T01:intron 30.0%
AGATAAAGTCAGTTAATGGT+TGG + Chr7:470504-470523 None:intergenic 30.0%
AGCATATATGAATCCTTCAA+TGG + Chr7:469506-469525 None:intergenic 30.0%
ATAGTAGGGGTTATCTTATT+TGG + Chr7:471164-471183 None:intergenic 30.0%
ATATGCAACTAGAATCTGAT+CGG + Chr7:471767-471786 None:intergenic 30.0%
ATTATCTTCCTTGAAAGAAG+AGG - Chr7:471620-471639 MsG0780035953.01.T01:CDS 30.0%
ATTGCTTATCTGATATCTTG+AGG + Chr7:469276-469295 None:intergenic 30.0%
CAAAGAAAAGAAGGAACAAT+TGG - Chr7:469472-469491 MsG0780035953.01.T01:intron 30.0%
CAGAATAGTGTTATCAATGA+CGG + Chr7:472210-472229 None:intergenic 30.0%
CTGTCAATAATATTTGACAG+CGG - Chr7:470982-471001 MsG0780035953.01.T01:intron 30.0%
CTTATTACACTTTGAACTAC+TGG - Chr7:472404-472423 MsG0780035953.01.T01:CDS 30.0%
CTTCAGTAAAATATCAGGTT+TGG - Chr7:473404-473423 MsG0780035953.01.T01:CDS 30.0%
CTTGTCTAATAACTGTTACA+TGG - Chr7:473244-473263 MsG0780035953.01.T01:CDS 30.0%
CTTTCTAAACAGTATAATGC+TGG - Chr7:473279-473298 MsG0780035953.01.T01:CDS 30.0%
GAAAGTCTCTTTAACATTGA+AGG + Chr7:472605-472624 None:intergenic 30.0%
GCTAAGCATATAATCTCTTT+AGG - Chr7:471657-471676 MsG0780035953.01.T01:CDS 30.0%
GGAAACAAGTTAAATAACGA+AGG - Chr7:469344-469363 MsG0780035953.01.T01:intron 30.0%
GGTATATAGAATTCATGAAC+TGG + Chr7:470801-470820 None:intergenic 30.0%
GTAGTTCAAAGTGTAATAAG+AGG + Chr7:472404-472423 None:intergenic 30.0%
GTATCAATGTTGTCAAATAG+AGG - Chr7:472030-472049 MsG0780035953.01.T01:CDS 30.0%
GTCACTTAATGAATGTATCT+AGG - Chr7:473059-473078 MsG0780035953.01.T01:CDS 30.0%
GTTGCATATATAAGATAGCA+AGG - Chr7:471778-471797 MsG0780035953.01.T01:CDS 30.0%
GTTTAGCATATACATAGAGA+TGG - Chr7:472739-472758 MsG0780035953.01.T01:CDS 30.0%
TAGACATGTAGATTTGATGA+GGG - Chr7:473221-473240 MsG0780035953.01.T01:CDS 30.0%
TATATGCTTAGACAATTGAG+TGG - Chr7:469518-469537 MsG0780035953.01.T01:intron 30.0%
TATGGACTCTTGTATAAACA+AGG + Chr7:470437-470456 None:intergenic 30.0%
TATTGACAGTGTGAAATATG+AGG + Chr7:470971-470990 None:intergenic 30.0%
TCAAAGATATTTCTTGTCAG+AGG + Chr7:471328-471347 None:intergenic 30.0%
TCATGAATTCTATATACCTG+TGG - Chr7:470803-470822 MsG0780035953.01.T01:intron 30.0%
TCATTGACAAAAGTTCAGTA+AGG + Chr7:471878-471897 None:intergenic 30.0%
TCTGACAAGAAATATCTTTG+AGG - Chr7:471327-471346 MsG0780035953.01.T01:CDS 30.0%
TGACTTTATCTCTAATGACA+GGG - Chr7:470513-470532 MsG0780035953.01.T01:intron 30.0%
TGCATATATAAGATAGCAAG+GGG - Chr7:471780-471799 MsG0780035953.01.T01:CDS 30.0%
TTAGAATCAATGATTGGTGA+TGG - Chr7:473156-473175 MsG0780035953.01.T01:CDS 30.0%
TTATCACAAATAAACGGTGA+TGG + Chr7:473432-473451 None:intergenic 30.0%
TTCTATGTATCCATTCAGAA+TGG + Chr7:469705-469724 None:intergenic 30.0%
TTTCTTACCATCAATAGTAG+GGG + Chr7:471177-471196 None:intergenic 30.0%
! ATAACCTGCTTTCTTTAAGA+TGG + Chr7:472894-472913 None:intergenic 30.0%
! GTGGACTGTCTAATTAAATA+AGG - Chr7:473652-473671 MsG0780035953.01.T01:CDS 30.0%
! TCTAAAGTATTTCCTGTTAC+CGG + Chr7:471433-471452 None:intergenic 30.0%
! TGATTTTTCCTCTTCTTTCA+AGG + Chr7:471631-471650 None:intergenic 30.0%
! TTTTATCAGTGATGTACACT+TGG + Chr7:471965-471984 None:intergenic 30.0%
!! ATGGACTAGTTGATGTATTA+TGG - Chr7:473931-473950 MsG0780035953.01.T01:CDS 30.0%
!! CAGAACACTTTTGAAGATTA+TGG - Chr7:473884-473903 MsG0780035953.01.T01:CDS 30.0%
!! CAGATAACAAATGGATTTTC+TGG - Chr7:471225-471244 MsG0780035953.01.T01:CDS 30.0%
!! TCTCAACCTATTTTTCACTT+TGG + Chr7:473718-473737 None:intergenic 30.0%
!! TTCTAACGGATGAAGATTTT+CGG - Chr7:469729-469748 MsG0780035953.01.T01:CDS 30.0%
!!! AGAGCTATTTTAATCTTGTG+TGG - Chr7:472830-472849 MsG0780035953.01.T01:CDS 30.0%
!!! ATATTTTCTAGTGCCATTTC+TGG + Chr7:471054-471073 None:intergenic 30.0%
!!! CCGAAACTTTCTTTTTTCTT+TGG + Chr7:470042-470061 None:intergenic 30.0%
!!! GTTGAGGTTGTTTTTATAAG+AGG - Chr7:472506-472525 MsG0780035953.01.T01:CDS 30.0%
AACCTTGTCATCATTTAAGC+TGG + Chr7:472795-472814 None:intergenic 35.0%
AAGAAAACTAACCGACGAAA+TGG + Chr7:472981-473000 None:intergenic 35.0%
AAGATAACCCCTACTATTGA+TGG - Chr7:471167-471186 MsG0780035953.01.T01:intron 35.0%
AATGGAAACTAGTGCTTTCA+CGG + Chr7:469687-469706 None:intergenic 35.0%
AATTCATGAACTGGTACTCT+TGG + Chr7:470792-470811 None:intergenic 35.0%
ACTACCATCTTAAAGAAAGC+AGG - Chr7:472887-472906 MsG0780035953.01.T01:CDS 35.0%
ACTTCAACTTCATAGACTTG+AGG + Chr7:470642-470661 None:intergenic 35.0%
AGAAAAGAAGGAACAATTGG+GGG - Chr7:469475-469494 MsG0780035953.01.T01:intron 35.0%
AGAAATGGATGAAGAGTTCA+TGG - Chr7:473125-473144 MsG0780035953.01.T01:CDS 35.0%
AGAGGACAAATAAATTCCTG+TGG + Chr7:471310-471329 None:intergenic 35.0%
AGCTTCCTTCAGATAACAAA+TGG - Chr7:471216-471235 MsG0780035953.01.T01:CDS 35.0%
ATAAATTCCTGTGGTATGCT+TGG + Chr7:471301-471320 None:intergenic 35.0%
ATCAACTAGTCCATGAAGAA+GGG + Chr7:473925-473944 None:intergenic 35.0%
ATCAAGGCATGGTTTCAAAA+GGG - Chr7:471394-471413 MsG0780035953.01.T01:intron 35.0%
ATGCAGCTTAGCATTATTAC+TGG - Chr7:469917-469936 MsG0780035953.01.T01:CDS 35.0%
CAAGTGTCTAATGTGAAAAG+AGG - Chr7:469449-469468 MsG0780035953.01.T01:intron 35.0%
CAGATTCTCCCTATACAAAA+TGG + Chr7:473976-473995 None:intergenic 35.0%
CGATCAAACGCTTCAAAATA+AGG + Chr7:471480-471499 None:intergenic 35.0%
CTAGACATGTAGATTTGATG+AGG - Chr7:473220-473239 MsG0780035953.01.T01:CDS 35.0%
CTGACTTTATCTCTAATGAC+AGG - Chr7:470512-470531 MsG0780035953.01.T01:intron 35.0%
GAAAAGAGGCAAAGAAAAGA+AGG - Chr7:469463-469482 MsG0780035953.01.T01:intron 35.0%
GAAGAAATGGTATGACAACA+AGG - Chr7:470165-470184 MsG0780035953.01.T01:CDS 35.0%
GAGGTTTGAACAAGGAAATT+TGG - Chr7:471701-471720 MsG0780035953.01.T01:CDS 35.0%
GATATTGTTGCCTGAACTTT+GGG - Chr7:470111-470130 MsG0780035953.01.T01:CDS 35.0%
GATCACTTGAATTACCATGA+TGG + Chr7:469175-469194 None:intergenic 35.0%
GCTAAATGTAACCATTTCGT+CGG - Chr7:472967-472986 MsG0780035953.01.T01:CDS 35.0%
GGAAGATGAAGAAGAAGAAA+TGG - Chr7:473110-473129 MsG0780035953.01.T01:CDS 35.0%
GGATCAAATATACAACACTG+AGG + Chr7:470021-470040 None:intergenic 35.0%
GTAGTAAAGTAGTAGTTAGG+TGG - Chr7:473633-473652 MsG0780035953.01.T01:CDS 35.0%
GTGGTAGTAAAGTAGTAGTT+AGG - Chr7:473630-473649 MsG0780035953.01.T01:CDS 35.0%
TCAAAGAGGAGAAACAATTG+TGG + Chr7:469766-469785 None:intergenic 35.0%
TCAAGATCTTCTTTCCATCA+TGG - Chr7:469158-469177 MsG0780035953.01.T01:CDS 35.0%
TCATTCCAGTGGAAGAAAAA+TGG + Chr7:472856-472875 None:intergenic 35.0%
TTTGAGAGGCAAAATCAAGA+AGG + Chr7:471531-471550 None:intergenic 35.0%
! CTCTTTTCACATTAGACACT+TGG + Chr7:469451-469470 None:intergenic 35.0%
! CTGAACTTTTGTCAATGAAG+AGG - Chr7:471880-471899 MsG0780035953.01.T01:intron 35.0%
! CTTTGAAAGAAAAGCCATCA+AGG - Chr7:471378-471397 MsG0780035953.01.T01:CDS 35.0%
! GATGTCACTTCTTTCATAAG+TGG - Chr7:472288-472307 MsG0780035953.01.T01:CDS 35.0%
! TAAGTTAAAAAAGCGCGATG+AGG - Chr7:471572-471591 MsG0780035953.01.T01:CDS 35.0%
!! CATAAAGTGCTGTCAAATAG+TGG - Chr7:472132-472151 MsG0780035953.01.T01:intron 35.0%
!! CTATGAAGTTGAAGTTGATG+AGG - Chr7:470647-470666 MsG0780035953.01.T01:intron 35.0%
!! CTTGATGGCTTTTCTTTCAA+AGG + Chr7:471380-471399 None:intergenic 35.0%
!!! AACTGCATGCCATTTTGTAT+AGG - Chr7:473964-473983 MsG0780035953.01.T01:CDS 35.0%
!!! ACTGCATGCCATTTTGTATA+GGG - Chr7:473965-473984 MsG0780035953.01.T01:CDS 35.0%
!!! GCTATCGTTTTCAAGTTACA+AGG - Chr7:471594-471613 MsG0780035953.01.T01:CDS 35.0%
AAAGAAAAGCCATCAAGGCA+TGG - Chr7:471383-471402 MsG0780035953.01.T01:CDS 40.0%
AAAGGGAAACAGAACATGTC+CGG - Chr7:471411-471430 MsG0780035953.01.T01:intron 40.0%
AAAGGTTTGACCTGACTCTA+AGG + Chr7:471362-471381 None:intergenic 40.0%
AACAACCTCAACATCATGCA+AGG + Chr7:472498-472517 None:intergenic 40.0%
AACTGTGAGAGAGGTTCTTA+TGG - Chr7:470687-470706 MsG0780035953.01.T01:CDS 40.0%
AAGTGATCCTCTTCACTCTT+TGG - Chr7:469187-469206 MsG0780035953.01.T01:CDS 40.0%
ACTCCAACTATTCCTTCCAT+CGG - Chr7:470325-470344 MsG0780035953.01.T01:CDS 40.0%
ATATTCTCCAAGCATACCAC+AGG - Chr7:471291-471310 MsG0780035953.01.T01:CDS 40.0%
ATTATCCATTACGAGTCGAC+AGG - Chr7:470357-470376 MsG0780035953.01.T01:intron 40.0%
ATTCCGATGGAAGGAATAGT+TGG + Chr7:470331-470350 None:intergenic 40.0%
ATTGGAGTGGTTGAAAGTAG+TGG - Chr7:473611-473630 MsG0780035953.01.T01:CDS 40.0%
CACTTCTTTCATAAGTGGCT+TGG - Chr7:472293-472312 MsG0780035953.01.T01:CDS 40.0%
CATCAACTAGTCCATGAAGA+AGG + Chr7:473926-473945 None:intergenic 40.0%
CATCAAGGCATGGTTTCAAA+AGG - Chr7:471393-471412 MsG0780035953.01.T01:intron 40.0%
CGATATTGTTGCCTGAACTT+TGG - Chr7:470110-470129 MsG0780035953.01.T01:CDS 40.0%
CTAGAACATATTTGCACTGC+AGG - Chr7:472700-472719 MsG0780035953.01.T01:intron 40.0%
CTATCTTCCAAAGAGTGAAG+AGG + Chr7:469197-469216 None:intergenic 40.0%
CTCAAACTGTGGAAATTCGA+AGG - Chr7:471545-471564 MsG0780035953.01.T01:CDS 40.0%
CTCAAGACTTGTAATCACCT+TGG + Chr7:469825-469844 None:intergenic 40.0%
CTGAGAGATGATAGCTAAGA+AGG + Chr7:473319-473338 None:intergenic 40.0%
GACACATATAATGAGACGGA+GGG + Chr7:473502-473521 None:intergenic 40.0%
GCTCAAGTTCTTCATTCTCA+AGG + Chr7:473353-473372 None:intergenic 40.0%
GGTTGAGACAATGCAATGAT+CGG - Chr7:473730-473749 MsG0780035953.01.T01:CDS 40.0%
TAATAAGAGGACAGCGATGA+GGG + Chr7:472391-472410 None:intergenic 40.0%
TAATGACAGGGAAGTTCACT+TGG - Chr7:470525-470544 MsG0780035953.01.T01:intron 40.0%
TCAACTAGTCCATGAAGAAG+GGG + Chr7:473924-473943 None:intergenic 40.0%
TCGAATTTCCACAGTTTGAG+AGG + Chr7:471545-471564 None:intergenic 40.0%
TCTTGAGCTTCTTCACAGTA+AGG - Chr7:471821-471840 MsG0780035953.01.T01:intron 40.0%
TGACACATATAATGAGACGG+AGG + Chr7:473503-473522 None:intergenic 40.0%
TGCCAGCTTAAATGATGACA+AGG - Chr7:472790-472809 MsG0780035953.01.T01:CDS 40.0%
TGCTACATCAAGCATATGAG+TGG + Chr7:470926-470945 None:intergenic 40.0%
TTCTTTCGTTTCTCTGTAGG+AGG - Chr7:471682-471701 MsG0780035953.01.T01:CDS 40.0%
! AACGGATGAAGATTTTCGGT+CGG - Chr7:469733-469752 MsG0780035953.01.T01:CDS 40.0%
! AATGATGGAATTCCGATGGA+AGG + Chr7:470340-470359 None:intergenic 40.0%
! CTCAAGTACGATTTTACGTG+CGG - Chr7:469956-469975 MsG0780035953.01.T01:CDS 40.0%
! GCACTAGTTTCCATTCTGAA+TGG - Chr7:469692-469711 MsG0780035953.01.T01:CDS 40.0%
! GGATAATGATGGAATTCCGA+TGG + Chr7:470344-470363 None:intergenic 40.0%
! TACAAAGATTGGCTCAGTGA+AGG - Chr7:470295-470314 MsG0780035953.01.T01:CDS 40.0%
! TCAAGTACGATTTTACGTGC+GGG - Chr7:469957-469976 MsG0780035953.01.T01:CDS 40.0%
! TGAAGCGTTTGATCGATAAC+TGG - Chr7:471485-471504 MsG0780035953.01.T01:intron 40.0%
! TGATTTTGCCTCTCAAACTG+TGG - Chr7:471534-471553 MsG0780035953.01.T01:CDS 40.0%
! TTCTTTCATAAGTGGCTTGG+TGG - Chr7:472296-472315 MsG0780035953.01.T01:CDS 40.0%
!! AGCTTTGAAAACTGTGAGAG+AGG - Chr7:470678-470697 MsG0780035953.01.T01:CDS 40.0%
!! CGACTCGTAATGGATAATGA+TGG + Chr7:470355-470374 None:intergenic 40.0%
!! TAATACCTGTCGACTCGTAA+TGG + Chr7:470365-470384 None:intergenic 40.0%
!! TCTTTCATAAGTGGCTTGGT+GGG - Chr7:472297-472316 MsG0780035953.01.T01:CDS 40.0%
!!! CTTTTGAAACCATGCCTTGA+TGG + Chr7:471395-471414 None:intergenic 40.0%
AACAGAACATGTCCGGTAAC+AGG - Chr7:471418-471437 MsG0780035953.01.T01:intron 45.0%
AATAAGAGGACAGCGATGAG+GGG + Chr7:472390-472409 None:intergenic 45.0%
AATAGACGCTCCCAAAGTTC+AGG + Chr7:470124-470143 None:intergenic 45.0%
ATTGGGGGAAAAGCCATTGA+AGG - Chr7:469490-469509 MsG0780035953.01.T01:intron 45.0%
CACAGAAAAAACTGCTGCTG+AGG - Chr7:469859-469878 MsG0780035953.01.T01:CDS 45.0%
CTCTGTAGGAGGTTTGAACA+AGG - Chr7:471693-471712 MsG0780035953.01.T01:CDS 45.0%
GAACCAGTTACCTTAGAGTC+AGG - Chr7:471349-471368 MsG0780035953.01.T01:CDS 45.0%
GAGATGATAGCTAAGAAGGC+AGG + Chr7:473315-473334 None:intergenic 45.0%
GATATTGCTCCCCTTCTTCA+TGG - Chr7:473912-473931 MsG0780035953.01.T01:CDS 45.0%
GCCTTGATGAAGAGGATCAA+CGG - Chr7:472945-472964 MsG0780035953.01.T01:CDS 45.0%
GCTATCATCTCTCAGCTGAA+AGG - Chr7:473324-473343 MsG0780035953.01.T01:CDS 45.0%
GGGTTCTTTCGTTTCTCTGT+AGG - Chr7:471679-471698 MsG0780035953.01.T01:CDS 45.0%
GTAATAAGAGGACAGCGATG+AGG + Chr7:472392-472411 None:intergenic 45.0%
TGATCCTCTTCATCAAGGCT+AGG + Chr7:472944-472963 None:intergenic 45.0%
! GTTTTGCGACTCTCCTTTTC+AGG - Chr7:470081-470100 MsG0780035953.01.T01:intron 45.0%
! TTTTTGCTGACCATTGCCTG+TGG + Chr7:470591-470610 None:intergenic 45.0%
!! ATCTCCTAGCCTTGATGAAG+AGG - Chr7:472937-472956 MsG0780035953.01.T01:CDS 45.0%
!! CTTAGCCTTGCATGATGTTG+AGG - Chr7:472490-472509 MsG0780035953.01.T01:CDS 45.0%
!! TGACCTGACTCTAAGGTAAC+TGG + Chr7:471355-471374 None:intergenic 45.0%
!!! TGTGGCCATTTTTCTTCCAC+TGG - Chr7:472848-472867 MsG0780035953.01.T01:CDS 45.0%
AATATCGTCCGCGCCTGAAA+AGG + Chr7:470097-470116 None:intergenic 50.0%
AGCAGCTTCTTGCACAGGAA+GGG - Chr7:469105-469124 MsG0780035953.01.T01:CDS 50.0%
ATAACGGCGCTATAGCGTAG+TGG - Chr7:472068-472087 MsG0780035953.01.T01:intron 50.0%
CAAGGACAGCTGCAGAAGAA+TGG - Chr7:471015-471034 MsG0780035953.01.T01:intron 50.0%
CAGGAAGGGTTCAAAGCAAG+CGG - Chr7:469119-469138 MsG0780035953.01.T01:CDS 50.0%
GACAGCGGAAAGGAACATCA+AGG - Chr7:470997-471016 MsG0780035953.01.T01:intron 50.0%
GCCGTTGATCCTCTTCATCA+AGG + Chr7:472949-472968 None:intergenic 50.0%
! CAAGCGGCAGAAAAGTGCAA+AGG - Chr7:469135-469154 MsG0780035953.01.T01:CDS 50.0%
! GCGATGAGGGGCTTTTCAAT+TGG + Chr7:472378-472397 None:intergenic 50.0%
! TGACGGATCGCAGAGTATAG+CGG + Chr7:472193-472212 None:intergenic 50.0%
! TTTGGAGCAGCTTCTTGCAC+AGG - Chr7:469100-469119 MsG0780035953.01.T01:CDS 50.0%
!! AGAGCGCAATTCTGAGACCA+AGG - Chr7:469805-469824 MsG0780035953.01.T01:CDS 50.0%
ACCATTCTCGCCACAGGCAA+TGG - Chr7:470578-470597 MsG0780035953.01.T01:intron 55.0%
ACCATTGCCTGTGGCGAGAA+TGG + Chr7:470582-470601 None:intergenic 55.0%
CAACGAACCATTCTCGCCAC+AGG - Chr7:470572-470591 MsG0780035953.01.T01:intron 55.0%
CTGTGGCGAGAATGGTTCGT+TGG + Chr7:470574-470593 None:intergenic 55.0%
GAGCAGCTTCTTGCACAGGA+AGG - Chr7:469104-469123 MsG0780035953.01.T01:CDS 55.0%
GGCATCAAGTGCCTCTGCAA+TGG + Chr7:472774-472793 None:intergenic 55.0%
GGCTGTGAATGCCATTGCAG+AGG - Chr7:472760-472779 MsG0780035953.01.T01:CDS 55.0%
!! GCGACTCTCCTTTTCAGGCG+CGG - Chr7:470086-470105 MsG0780035953.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 469089 473998 469089 ID=MsG0780035953.01;Name=MsG0780035953.01
Chr7 mRNA 469089 473998 469089 ID=MsG0780035953.01.T01;Parent=MsG0780035953.01;Name=MsG0780035953.01.T01;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|9|0|1075
Chr7 exon 472709 473998 472709 ID=MsG0780035953.01.T01:exon:38299;Parent=MsG0780035953.01.T01
Chr7 exon 472263 472553 472263 ID=MsG0780035953.01.T01:exon:38298;Parent=MsG0780035953.01.T01
Chr7 exon 471899 472085 471899 ID=MsG0780035953.01.T01:exon:38297;Parent=MsG0780035953.01.T01
Chr7 exon 471513 471800 471513 ID=MsG0780035953.01.T01:exon:38296;Parent=MsG0780035953.01.T01
Chr7 exon 471186 471408 471186 ID=MsG0780035953.01.T01:exon:38295;Parent=MsG0780035953.01.T01
Chr7 exon 470662 470806 470662 ID=MsG0780035953.01.T01:exon:38294;Parent=MsG0780035953.01.T01
Chr7 exon 470099 470365 470099 ID=MsG0780035953.01.T01:exon:38293;Parent=MsG0780035953.01.T01
Chr7 exon 469559 469976 469559 ID=MsG0780035953.01.T01:exon:38292;Parent=MsG0780035953.01.T01
Chr7 exon 469089 469207 469089 ID=MsG0780035953.01.T01:exon:38291;Parent=MsG0780035953.01.T01
Chr7 CDS 472709 473998 472709 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 472263 472553 472263 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 471899 472085 471899 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 471513 471800 471513 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 471186 471408 471186 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 470662 470806 470662 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 470099 470365 470099 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 469559 469976 469559 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Chr7 CDS 469089 469207 469089 ID=MsG0780035953.01.T01:cds;Parent=MsG0780035953.01.T01
Gene Sequence

>MsG0780035953.01.T01

ATGGCTTCATCTTTGGAGCAGCTTCTTGCACAGGAAGGGTTCAAAGCAAGCGGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCATCATGGTAATTCAAGTGATCCTCTTCACTCTTTGGAAGATAGACTGTGTGTATCATCAAGTGAAAGAATTAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAGATAAGCAATACAAGTGACAATAAAAACATGAGATCAAGTGATAATAATGTTTTTATAGGAAACAAGTTAAATAACGAAGGGTCGAAGAACAGTGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGACGATGCTTATTCAAACCAAGTGTCTAATGTGAAAAGAGGCAAAGAAAAGAAGGAACAATTGGGGGAAAAGCCATTGAAGGATTCATATATGCTTAGACAATTGAGTGGAAATAGAAAGAATATAAAACATCAAGAAAAATCATACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGTTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCCGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAACGGATGAAGATTTTCGGTCGGCATTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTTGAGGAAGAGCGCAATTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCACAGAAAAAACTGCTGCTGAGGAAACTATATCTGCAACACATCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAGTTTGAATGATCTCAAGTACGATTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCGCGGACGATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATGACAACAAGGAAAGTGAAATTGTTTTAGATACACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAGTTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATCGGAATTCCATCATTATCCATTACGAGTCGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCTAGCTCCAACGAACCATTCTCGCCACAGGCAATGGTCAGCAAAAAACTTTATGATTCTTTCTTTGGTAGTAAACCTCAAGTCTATGAAGTTGAAGTTGATGAGGATGAAGATAGCTTTGAAAACTGTGAGAGAGGTTCTTATGGTTCGACCATCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATCGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATACCTGTGCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAAGAATTCCAGAAATGGCACTAGAAAATATTTCTCCATAGAAACTAATTTAAACAGTCACATATCTAATGATCTACCACATGAAAAAGCAAATGAAATTTCTATCAAAAAGATGCAGCCAAATAAGATAACCCCTACTATTGATGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCAGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCGGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATTGCCTTCTTGATTTTGCCTCTCAAACTGTGGAAATTCGAAGGAAATTAAGGGTTCTTTCGTTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATCGAGATCTTGTTAAATTGTATCCGATCAGATTCTAGTTGCATATATAAGATAGCAAGGGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCAACAAAAAATGCAATACTATTCCTTACTGAACTTTTGTCAATGAAGAGAAGAAAGGATGTCACTTCTTTCATAAGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGCATCTTAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAATACTACCATCTTAAAGAAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAACGGCTAAATGTAACCATTTCGTCGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCAAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCTATTTTTGAAGACCATATCTAGATGTTTAGATTCTAGACATGTAGATTTGATGAGGGCTTGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAGTATAATGCTGGATTGCATCTTCCTGCCTTCTTAGCTATCATCTCTCAGCTGAAAGGAATCCTTGAGAATGAAGAACTTGAGCTCAAGACTCTTGCATCTATGTCCTTGTTCAACTTCAGTAAAATATCAGGTTTGGCACCATCACCGTTTATTTGTGATAAAAATCTTGCTAATTTCGGAACTATTGAAAGCAATTTTAAATGTTATTCCCTCCGTCTCATTATATGTGTCATTTTAGAATGCAGAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTGTATAGGGAGAATCTGTAG

Protein sequence

>MsG0780035953.01.T01

MASSLEQLLAQEGFKASGRKVQRSRSSFHHGNSSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNMRSSDNNVFIGNKLNNEGSKNSESEKNKSYNSSDSDSGFDDAYSNQVSNVKRGKEKKEQLGEKPLKDSYMLRQLSGNRKNIKHQEKSYSRSNSNSKNYEDSKNKNSNHVMQLQDASSLAIDEIAVKALVSILNGYIESFLTDEDFRSALRHNCFSSLNFIQLEEERNSETKVITSLEQAIECTEKTAAEETISATHLKRATMQLSIITGLSLNDLKYDFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSSQLSDLKKWYDNKESEIVLDTQNKARKIKILQKVYNESLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVEVDEDEDSFENCERGSYGSTIVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYIPVRKGTSRTAAEEWKEKNSRNGTRKYFSIETNLNSHISNDLPHEKANEISIKKMQPNKITPTIDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDCLLDFASQTVEIRRKLRVLSFLCRRFEQGNLEEKSHVIEILLNCIRSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRRKDVTSFISGLVGEDVVSTMHIVLMHLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVNAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTTILKKAGYNNGSSELKSPSLDEEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGESLFLKTISRCLDSRHVDLMRACLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILENEELELKTLASMSLFNFSKISGLAPSPFICDKNLANFGTIESNFKCYSLRLIICVILECRTLLKIMADDIAPLLHGLVDVLWTAKKLHAILYRENL*