AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025507.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025507.01.T01 MTR_5g029840 96.707 334 11 0 13 346 1 334 0.0 663
MsG0580025507.01.T01 MTR_4g478180 44.110 365 155 9 12 346 1 346 4.80e-86 264
MsG0580025507.01.T01 MTR_3g074520 61.828 186 61 2 13 188 1 186 2.73e-80 249
MsG0580025507.01.T01 MTR_5g007370 43.860 342 141 12 13 346 1 299 1.77e-74 232
MsG0580025507.01.T01 MTR_2g089620 70.968 155 45 0 13 167 1 155 9.75e-74 231
MsG0580025507.01.T01 MTR_2g011660 77.692 130 28 1 13 141 1 130 1.80e-71 226
MsG0580025507.01.T01 MTR_4g091490 43.385 325 135 8 13 299 1 314 1.50e-70 224
MsG0580025507.01.T01 MTR_6g012690 71.756 131 37 0 13 143 1 131 3.23e-70 223
MsG0580025507.01.T01 MTR_7g011170 66.207 145 45 1 13 153 1 145 1.96e-69 219
MsG0580025507.01.T01 MTR_4g082290 69.925 133 40 0 13 145 1 133 1.85e-68 220
MsG0580025507.01.T01 MTR_4g082230 68.939 132 41 0 13 144 1 132 1.68e-66 215
MsG0580025507.01.T01 MTR_4g073420 65.068 146 51 0 13 158 1 146 1.62e-65 209
MsG0580025507.01.T01 MTR_6g009430 52.525 198 83 3 13 210 1 187 4.12e-64 207
MsG0580025507.01.T01 MTR_7g076740 68.217 129 40 1 13 140 1 129 9.11e-64 205
MsG0580025507.01.T01 MTR_8g031360 68.462 130 39 2 13 140 1 130 1.43e-63 204
MsG0580025507.01.T01 MTR_5g078140 69.531 128 39 0 13 140 1 128 7.48e-63 203
MsG0580025507.01.T01 MTR_4g102380 69.531 128 39 0 13 140 1 128 9.97e-63 201
MsG0580025507.01.T01 MTR_3g065440 69.291 127 39 0 13 139 1 127 7.55e-62 200
MsG0580025507.01.T01 MTR_3g097450 67.939 131 42 0 13 143 1 131 1.97e-61 199
MsG0580025507.01.T01 MTR_5g079670 58.000 150 63 0 15 164 2 151 3.17e-60 192
MsG0580025507.01.T01 MTR_3g461490 51.813 193 84 6 13 202 1 187 4.59e-60 196
MsG0580025507.01.T01 MTR_8g095390 66.406 128 43 0 13 140 1 128 1.01e-59 195
MsG0580025507.01.T01 MTR_1g085040 64.122 131 47 0 13 143 1 131 2.85e-59 195
MsG0580025507.01.T01 MTR_1g100653 70.690 116 34 0 13 128 1 116 7.16e-59 192
MsG0580025507.01.T01 MTR_7g110830 62.963 135 50 0 13 147 1 135 9.64e-59 194
MsG0580025507.01.T01 MTR_4g105130 63.359 131 48 0 13 143 1 131 2.64e-58 192
MsG0580025507.01.T01 MTR_3g083540 66.129 124 42 0 17 140 34 157 1.06e-57 189
MsG0580025507.01.T01 MTR_1g085640 62.595 131 49 0 13 143 1 131 1.17e-57 192
MsG0580025507.01.T01 MTR_2g064160 63.636 121 44 0 18 138 5 125 2.84e-57 188
MsG0580025507.01.T01 MTR_7g096930 69.828 116 35 0 13 128 1 116 6.46e-57 186
MsG0580025507.01.T01 MTR_1g076150 70.690 116 34 0 13 128 1 116 8.60e-57 185
MsG0580025507.01.T01 MTR_1g043080 70.085 117 35 0 13 129 1 117 9.87e-57 185
MsG0580025507.01.T01 MTR_7g115650 56.376 149 60 2 13 160 1 145 1.13e-56 183
MsG0580025507.01.T01 MTR_5g042030 66.942 121 40 0 22 142 5 125 2.51e-56 185
MsG0580025507.01.T01 MTR_3g077110 63.281 128 47 0 13 140 1 128 3.27e-56 187
MsG0580025507.01.T01 MTR_1g043050 69.231 117 36 0 13 129 1 117 3.55e-56 184
MsG0580025507.01.T01 MTR_7g111290 55.000 160 67 1 13 167 1 160 5.17e-55 184
MsG0580025507.01.T01 MTR_4g121460 67.241 116 38 0 13 128 1 116 1.47e-54 182
MsG0580025507.01.T01 MTR_1g112760 58.209 134 56 0 15 148 4 137 1.92e-54 178
MsG0580025507.01.T01 MTR_4g057635 63.077 130 46 2 13 141 1 129 4.21e-54 181
MsG0580025507.01.T01 MTR_7g010210 65.254 118 41 0 13 130 1 118 6.15e-54 180
MsG0580025507.01.T01 MTR_7g010210 65.254 118 41 0 13 130 1 118 7.76e-54 178
MsG0580025507.01.T01 MTR_4g485530 64.800 125 43 1 15 138 2 126 7.94e-54 176
MsG0580025507.01.T01 MTR_8g098860 65.254 118 41 0 13 130 1 118 9.28e-54 179
MsG0580025507.01.T01 MTR_7g117730 66.379 116 39 0 13 128 1 116 1.02e-53 177
MsG0580025507.01.T01 MTR_2g034790 45.536 224 92 7 13 219 1 211 3.22e-53 178
MsG0580025507.01.T01 MTR_3g039990 64.167 120 43 0 12 131 1 120 3.73e-53 177
MsG0580025507.01.T01 MTR_7g087130 63.200 125 44 1 13 135 1 125 5.77e-53 178
MsG0580025507.01.T01 MTR_8g027345 65.254 118 41 0 13 130 1 118 6.51e-53 177
MsG0580025507.01.T01 MTR_0140s0030 57.576 132 50 1 12 137 1 132 7.88e-53 177
MsG0580025507.01.T01 MTR_0489s0020 57.576 132 50 1 12 137 1 132 7.88e-53 177
MsG0580025507.01.T01 MTR_8g017540 44.796 221 102 8 12 217 46 261 9.92e-53 179
MsG0580025507.01.T01 MTR_2g099740 57.353 136 51 1 13 141 1 136 1.30e-52 179
MsG0580025507.01.T01 MTR_5g010020 53.896 154 69 2 13 165 1 153 1.64e-52 177
MsG0580025507.01.T01 MTR_8g017440 60.163 123 49 0 13 135 1 123 3.46e-52 176
MsG0580025507.01.T01 MTR_4g125520 67.241 116 38 0 13 128 1 116 8.15e-52 174
MsG0580025507.01.T01 MTR_7g102110 62.500 120 44 1 13 131 1 120 9.06e-52 173
MsG0580025507.01.T01 MTR_1g017000 53.704 162 70 4 13 172 1 159 2.97e-51 171
MsG0580025507.01.T01 MTR_2g067420 69.091 110 34 0 14 123 4 113 3.83e-51 173
MsG0580025507.01.T01 MTR_2g089450 65.254 118 41 0 13 130 1 118 6.32e-51 170
MsG0580025507.01.T01 MTR_2g095520 67.568 111 35 1 13 122 1 111 6.59e-51 172
MsG0580025507.01.T01 MTR_6g012180 67.273 110 36 0 13 122 1 110 2.61e-50 171
MsG0580025507.01.T01 MTR_3g103570 63.559 118 42 1 13 129 1 118 4.17e-50 171
MsG0580025507.01.T01 MTR_8g017500 57.724 123 52 0 13 135 1 123 9.08e-50 170
MsG0580025507.01.T01 MTR_0008s0470 61.864 118 44 1 13 129 1 118 1.97e-49 167
MsG0580025507.01.T01 MTR_0251s0050 63.248 117 42 1 13 128 1 117 2.22e-49 167
MsG0580025507.01.T01 MTR_1g017140 62.712 118 43 1 13 129 1 118 3.59e-49 168
MsG0580025507.01.T01 MTR_5g014990 42.411 224 113 4 13 220 1 224 3.97e-49 167
MsG0580025507.01.T01 MTR_0008s0390 61.864 118 44 1 13 129 1 118 1.50e-48 164
MsG0580025507.01.T01 MTR_6g090405 61.017 118 45 1 13 129 1 118 5.68e-48 162
MsG0580025507.01.T01 MTR_3g052450 63.889 108 39 0 20 127 36 143 1.54e-47 168
MsG0580025507.01.T01 MTR_1g086510 51.899 158 73 2 14 169 11 167 2.13e-47 161
MsG0580025507.01.T01 MTR_8g017340 56.618 136 57 2 13 147 1 135 1.50e-46 165
MsG0580025507.01.T01 MTR_4g065017 55.814 129 50 1 24 145 17 145 3.90e-46 160
MsG0580025507.01.T01 MTR_2g097910 54.264 129 52 1 24 145 20 148 5.70e-46 159
MsG0580025507.01.T01 MTR_8g017350 56.618 136 57 2 13 147 1 135 6.44e-46 166
MsG0580025507.01.T01 MTR_2g089420 59.322 118 47 1 13 130 1 117 7.43e-46 162
MsG0580025507.01.T01 MTR_3g052430 64.423 104 37 0 24 127 41 144 7.46e-46 164
MsG0580025507.01.T01 MTR_0063s0090 62.832 113 42 0 13 125 1 113 8.08e-46 156
MsG0580025507.01.T01 MTR_7g035075 66.667 105 35 0 24 128 14 118 9.74e-46 155
MsG0580025507.01.T01 MTR_4g128670 43.243 222 104 5 13 212 1 222 1.01e-45 159
MsG0580025507.01.T01 MTR_0008s0280 60.526 114 45 0 13 126 1 114 1.17e-45 155
MsG0580025507.01.T01 MTR_4g097570 62.727 110 40 1 13 121 1 110 1.64e-45 157
MsG0580025507.01.T01 MTR_1g110460 60.000 115 46 0 20 134 22 136 1.68e-45 157
MsG0580025507.01.T01 MTR_1g100667 60.870 115 44 1 25 139 14 127 1.92e-45 156
MsG0580025507.01.T01 MTR_8g017390 57.627 118 49 1 13 129 1 118 2.19e-45 161
MsG0580025507.01.T01 MTR_6g006030 58.678 121 48 1 13 131 1 121 2.83e-45 154
MsG0580025507.01.T01 MTR_3g011610 61.321 106 41 0 22 127 35 140 3.39e-45 162
MsG0580025507.01.T01 MTR_8g042410 62.264 106 40 0 22 127 35 140 1.41e-44 160
MsG0580025507.01.T01 MTR_4g100720 58.197 122 51 0 26 147 15 136 2.77e-44 150
MsG0580025507.01.T01 MTR_3g028740 61.905 105 40 0 24 128 22 126 3.76e-44 155
MsG0580025507.01.T01 MTR_7g109320 62.069 116 44 0 13 128 1 116 4.50e-44 155
MsG0580025507.01.T01 MTR_4g097570 62.162 111 40 2 13 121 1 111 4.95e-44 153
MsG0580025507.01.T01 MTR_1g086530 52.459 122 58 0 20 141 29 150 6.57e-43 150
MsG0580025507.01.T01 MTR_1g073170 62.136 103 39 0 25 127 21 123 1.63e-42 148
MsG0580025507.01.T01 MTR_1g045610 62.136 103 39 0 25 127 22 124 2.76e-42 148
MsG0580025507.01.T01 MTR_1g021230 61.538 104 40 0 24 127 57 160 1.01e-41 151
MsG0580025507.01.T01 MTR_8g020490 59.322 118 44 1 13 130 1 114 4.77e-41 144
MsG0580025507.01.T01 MTR_2g033170 56.693 127 53 1 20 144 20 146 1.00e-40 145
MsG0580025507.01.T01 MTR_5g079120 55.000 120 53 1 23 141 60 179 1.15e-40 145
MsG0580025507.01.T01 MTR_6g055910 58.772 114 46 1 25 138 15 127 1.44e-40 144
MsG0580025507.01.T01 MTR_4g063100 60.194 103 41 0 25 127 8 110 2.40e-40 142
MsG0580025507.01.T01 MTR_2g096380 59.615 104 42 0 24 127 6 109 2.45e-40 142
MsG0580025507.01.T01 MTR_1g062940 60.000 105 42 0 24 128 6 110 2.65e-40 141
MsG0580025507.01.T01 MTR_5g007300 70.787 89 26 0 12 100 52 140 4.12e-40 138
MsG0580025507.01.T01 MTR_5g078800 59.813 107 43 0 23 129 6 112 2.17e-39 140
MsG0580025507.01.T01 MTR_5g079290 57.944 107 45 0 23 129 16 122 2.78e-39 140
MsG0580025507.01.T01 MTR_5g079220 55.856 111 49 0 19 129 16 126 4.18e-39 140
MsG0580025507.01.T01 MTR_3g045430 40.212 189 102 5 13 194 1 185 4.26e-39 140
MsG0580025507.01.T01 MTR_7g017260 56.198 121 50 2 22 140 23 142 4.87e-39 140
MsG0580025507.01.T01 MTR_2g088170 61.321 106 41 0 22 127 27 132 8.63e-39 143
MsG0580025507.01.T01 MTR_5g078910 57.009 107 46 0 23 129 6 112 1.54e-38 139
MsG0580025507.01.T01 MTR_8g060940 58.824 102 42 0 23 124 6 107 3.54e-38 137
MsG0580025507.01.T01 MTR_4g123040 53.543 127 57 1 20 144 20 146 5.04e-38 138
MsG0580025507.01.T01 MTR_5g078860 58.879 107 44 0 23 129 6 112 6.37e-38 137
MsG0580025507.01.T01 MTR_0197s0010 47.727 132 69 0 28 159 5 136 8.35e-38 135
MsG0580025507.01.T01 MTR_0247s0040 59.223 103 42 0 23 125 6 108 2.55e-37 132
MsG0580025507.01.T01 MTR_5g078950 58.252 103 43 0 23 125 6 108 3.74e-37 134
MsG0580025507.01.T01 MTR_0193s0090 52.941 119 55 1 23 141 6 123 7.17e-37 132
MsG0580025507.01.T01 MTR_0001s0360 56.075 107 47 0 23 129 6 112 7.43e-37 133
MsG0580025507.01.T01 MTR_5g088080 53.982 113 50 2 24 135 12 123 1.37e-36 133
MsG0580025507.01.T01 MTR_5g088150 53.982 113 50 2 24 135 12 123 1.37e-36 133
MsG0580025507.01.T01 MTR_5g488210 53.982 113 50 2 24 135 12 123 1.37e-36 133
MsG0580025507.01.T01 MTR_5g488170 53.982 113 50 2 24 135 12 123 1.51e-36 132
MsG0580025507.01.T01 MTR_5g088640 53.982 113 50 2 24 135 12 123 1.65e-36 133
MsG0580025507.01.T01 MTR_4g029540 39.766 171 94 5 24 191 10 174 6.91e-36 132
MsG0580025507.01.T01 MTR_5g062790 52.174 115 53 2 22 135 7 120 7.61e-36 132
MsG0580025507.01.T01 MTR_8g006470 51.327 113 53 2 20 131 6 117 1.41e-35 131
MsG0580025507.01.T01 MTR_5g078930 57.282 103 44 0 25 127 10 112 1.66e-35 129
MsG0580025507.01.T01 MTR_1g083630 52.066 121 57 1 13 133 1 120 1.92e-35 136
MsG0580025507.01.T01 MTR_7g111290 66.667 90 30 0 56 145 2 91 2.17e-35 132
MsG0580025507.01.T01 MTR_5g088610 52.174 115 53 2 22 135 7 120 3.39e-32 124
MsG0580025507.01.T01 MTR_4g019370 52.941 102 47 1 26 127 38 138 2.17e-31 121
MsG0580025507.01.T01 MTR_5g016510 50.459 109 53 1 26 134 5 112 1.07e-30 119
MsG0580025507.01.T01 MTR_4g063100 69.444 72 22 0 56 127 10 81 1.51e-30 116
MsG0580025507.01.T01 MTR_7g061330 52.427 103 48 1 26 128 113 214 3.00e-30 121
MsG0580025507.01.T01 MTR_7g461410 52.427 103 48 1 26 128 113 214 3.00e-30 121
MsG0580025507.01.T01 MTR_7g061330 52.427 103 48 1 26 128 77 178 4.18e-30 120
MsG0580025507.01.T01 MTR_4g094982 50.000 102 50 1 26 127 5 105 2.33e-29 114
MsG0580025507.01.T01 MTR_3g110028 47.573 103 53 1 26 128 85 186 3.92e-29 119
MsG0580025507.01.T01 MTR_3g110028 33.000 100 65 2 26 124 33 131 2.71e-11 65.5
MsG0580025507.01.T01 MTR_2g096380 68.056 72 23 0 56 127 19 90 3.93e-29 112
MsG0580025507.01.T01 MTR_4g128190 47.826 115 46 2 23 136 10 111 7.09e-29 112
MsG0580025507.01.T01 MTR_3g463400 42.735 117 65 2 12 127 118 233 8.55e-29 116
MsG0580025507.01.T01 MTR_6g015455 50.459 109 53 1 26 134 5 112 1.35e-28 117
MsG0580025507.01.T01 MTR_6g055910 62.195 82 30 1 57 138 18 98 2.23e-28 111
MsG0580025507.01.T01 MTR_5g070020 43.220 118 63 3 12 127 107 222 2.72e-28 113
MsG0580025507.01.T01 MTR_1g026870 47.573 103 53 1 26 128 85 186 6.73e-28 115
MsG0580025507.01.T01 MTR_1g026870 35.000 100 63 2 26 124 33 131 3.43e-12 68.2
MsG0580025507.01.T01 MTR_7g037260 43.636 110 61 1 21 130 140 248 3.51e-27 110
MsG0580025507.01.T01 MTR_5g049190 45.794 107 57 1 24 130 17 122 4.76e-27 107
MsG0580025507.01.T01 MTR_1g085880 55.238 105 45 2 24 126 11 115 7.70e-27 105
MsG0580025507.01.T01 MTR_7g451170 46.078 102 54 1 26 127 191 291 1.13e-26 109
MsG0580025507.01.T01 MTR_4g105660 45.794 107 57 1 24 130 178 283 1.72e-26 109
MsG0580025507.01.T01 MTR_3g101290 46.078 102 54 1 26 127 37 137 2.18e-26 105
MsG0580025507.01.T01 MTR_1g085770 55.238 105 45 2 24 126 11 115 3.30e-26 106
MsG0580025507.01.T01 MTR_4g088015 44.660 103 56 1 24 126 219 320 1.72e-25 106
MsG0580025507.01.T01 MTR_3g077650 43.636 110 61 1 21 130 176 284 1.83e-25 106
MsG0580025507.01.T01 MTR_5g082910 48.113 106 53 2 20 124 12 116 4.56e-25 103
MsG0580025507.01.T01 MTR_6g074860 44.954 109 56 2 26 131 4 111 6.40e-25 101
MsG0580025507.01.T01 MTR_1g057980 43.810 105 58 1 21 125 75 178 9.16e-25 102
MsG0580025507.01.T01 MTR_7g035350 46.392 97 51 1 29 125 228 323 2.77e-24 103
MsG0580025507.01.T01 MTR_5g010650 48.958 96 48 1 26 121 110 204 8.04e-24 102
MsG0580025507.01.T01 MTR_7g037130 40.952 105 61 1 21 125 140 243 2.14e-23 99.8
MsG0580025507.01.T01 MTR_6g027340 44.330 97 53 1 26 122 16 111 5.97e-23 95.1
MsG0580025507.01.T01 MTR_4g082040 41.026 117 63 2 11 127 95 205 6.86e-23 99.0
MsG0580025507.01.T01 MTR_7g061550 45.833 96 50 1 29 122 10 105 1.28e-22 97.4
MsG0580025507.01.T01 MTR_0023s0210 53.846 78 36 0 23 100 6 83 1.52e-22 90.5
MsG0580025507.01.T01 MTR_5g041570 42.105 114 60 2 14 127 127 234 1.61e-22 98.2
MsG0580025507.01.T01 MTR_7g450950 41.509 106 61 1 26 131 157 261 2.56e-22 96.3
MsG0580025507.01.T01 MTR_6g027360 42.424 99 56 1 24 122 76 173 3.71e-22 95.5
MsG0580025507.01.T01 MTR_3g089045 43.519 108 60 1 20 127 10 116 3.38e-21 92.4
MsG0580025507.01.T01 MTR_6g027370 42.157 102 58 1 26 127 99 199 3.55e-21 93.2
MsG0580025507.01.T01 MTR_7g086960 38.017 121 69 2 7 127 75 189 1.93e-18 85.5
MsG0580025507.01.T01 MTR_5g038910 38.384 99 60 1 29 127 29 126 2.81e-18 85.9
MsG0580025507.01.T01 MTR_5g038910 38.384 99 60 1 29 127 29 126 6.59e-18 84.3
MsG0580025507.01.T01 MTR_8g468380 38.679 106 63 2 29 134 25 128 3.02e-17 82.8
MsG0580025507.01.T01 MTR_5g007310 27.799 259 130 11 110 346 6 229 3.10e-15 74.3
MsG0580025507.01.T01 MTR_4g063100 65.217 46 16 0 82 127 1 46 2.93e-14 70.9
MsG0580025507.01.T01 MTR_6g055910 56.140 57 24 1 82 138 2 57 2.13e-13 68.9
MsG0580025507.01.T01 MTR_8g017480 55.769 52 23 0 13 64 1 52 2.45e-13 64.3
MsG0580025507.01.T01 MTR_2g096380 63.043 46 17 0 82 127 1 46 2.63e-13 67.8
MsG0580025507.01.T01 MTR_1g008970 41.667 72 42 0 47 118 111 182 4.01e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025507.01.T01 AT5G16770 49.288 351 135 11 13 346 1 325 4.93e-95 286
MsG0580025507.01.T01 AT5G16770 49.288 351 135 11 13 346 1 325 4.93e-95 286
MsG0580025507.01.T01 AT5G16770 49.288 351 135 11 13 346 1 325 1.45e-94 285
MsG0580025507.01.T01 AT5G16770 49.288 351 135 11 13 346 1 325 1.45e-94 285
MsG0580025507.01.T01 AT3G02940 45.402 348 138 8 13 346 1 310 6.52e-89 270
MsG0580025507.01.T01 AT3G02940 45.402 348 138 8 13 346 1 310 1.25e-88 269
MsG0580025507.01.T01 AT3G02940 45.402 348 138 8 13 346 1 310 1.25e-88 269
MsG0580025507.01.T01 AT4G17785 44.780 364 156 15 13 346 1 349 2.35e-82 254
MsG0580025507.01.T01 AT4G17785 44.505 364 157 15 13 346 1 349 8.97e-82 253
MsG0580025507.01.T01 AT1G34670 63.842 177 60 2 13 187 1 175 8.08e-79 246
MsG0580025507.01.T01 AT5G10280 61.622 185 59 4 13 188 1 182 1.78e-76 238
MsG0580025507.01.T01 AT4G21440 73.103 145 36 1 13 157 1 142 3.33e-75 236
MsG0580025507.01.T01 AT5G65230 64.641 181 59 1 13 188 1 181 8.09e-75 233
MsG0580025507.01.T01 AT4G28110 78.295 129 28 0 13 141 1 129 1.02e-72 227
MsG0580025507.01.T01 AT4G05100 79.231 130 26 1 13 141 1 130 2.76e-72 228
MsG0580025507.01.T01 AT5G15310 71.756 131 37 0 13 143 1 131 5.64e-71 221
MsG0580025507.01.T01 AT5G15310 71.756 131 37 0 13 143 1 131 2.60e-70 223
MsG0580025507.01.T01 AT5G15310 71.756 131 37 0 13 143 1 131 2.99e-70 222
MsG0580025507.01.T01 AT3G01140 65.359 153 48 1 13 165 1 148 8.64e-70 222
MsG0580025507.01.T01 AT3G61250 69.697 132 40 0 13 144 1 132 1.90e-68 217
MsG0580025507.01.T01 AT3G01140 63.871 155 51 1 11 165 42 191 1.19e-67 218
MsG0580025507.01.T01 AT4G12350 62.745 153 54 1 13 165 1 150 1.33e-64 206
MsG0580025507.01.T01 AT4G22680 71.875 128 36 0 13 140 1 128 4.45e-64 204
MsG0580025507.01.T01 AT1G66230 70.312 128 38 0 13 140 1 128 1.84e-63 203
MsG0580025507.01.T01 AT5G54230 68.966 145 42 1 13 157 1 142 1.88e-63 204
MsG0580025507.01.T01 AT4G09460 69.291 127 39 0 13 139 1 127 3.75e-63 201
MsG0580025507.01.T01 AT5G16600 70.312 128 38 0 13 140 1 128 4.44e-62 201
MsG0580025507.01.T01 AT4G38620 68.750 128 40 0 13 140 1 128 4.85e-62 200
MsG0580025507.01.T01 AT1G18570 70.312 128 37 1 13 139 1 128 4.91e-62 202
MsG0580025507.01.T01 AT1G35515 65.217 138 44 1 13 146 1 138 8.45e-62 197
MsG0580025507.01.T01 AT1G22640 68.504 127 40 0 13 139 1 127 1.86e-61 197
MsG0580025507.01.T01 AT4G34990 68.750 128 40 0 13 140 1 128 4.17e-61 197
MsG0580025507.01.T01 AT5G61420 66.406 128 43 0 13 140 1 128 1.48e-60 199
MsG0580025507.01.T01 AT2G16720 68.504 127 40 0 13 139 1 127 2.19e-60 195
MsG0580025507.01.T01 AT1G57560 62.590 139 52 0 13 151 1 139 4.79e-60 194
MsG0580025507.01.T01 AT5G56110 64.234 137 46 1 13 149 1 134 8.22e-60 195
MsG0580025507.01.T01 AT1G57560 60.403 149 50 1 13 152 1 149 8.70e-60 195
MsG0580025507.01.T01 AT5G60890 66.406 128 43 0 13 140 1 128 1.52e-59 194
MsG0580025507.01.T01 AT3G13540 66.400 125 42 0 16 140 15 139 2.28e-59 192
MsG0580025507.01.T01 AT5G14340 61.972 142 54 0 5 146 5 146 2.82e-59 192
MsG0580025507.01.T01 AT1G74080 66.412 131 44 0 13 143 1 131 3.22e-59 194
MsG0580025507.01.T01 AT5G07690 66.406 128 43 0 13 140 1 128 3.98e-59 194
MsG0580025507.01.T01 AT5G62320 63.158 133 42 1 14 139 3 135 5.80e-59 191
MsG0580025507.01.T01 AT5G26660 62.319 138 51 1 13 150 1 137 1.03e-58 193
MsG0580025507.01.T01 AT2G31180 48.980 196 84 3 13 193 1 195 7.06e-58 188
MsG0580025507.01.T01 AT1G09540 64.844 128 45 0 13 140 1 128 1.37e-57 191
MsG0580025507.01.T01 AT5G07700 64.844 128 45 0 13 140 1 128 3.16e-57 189
MsG0580025507.01.T01 AT5G07700 64.844 128 45 0 13 140 1 128 3.16e-57 189
MsG0580025507.01.T01 AT4G01680 64.122 131 47 0 13 143 1 131 4.33e-57 186
MsG0580025507.01.T01 AT3G23250 53.846 169 64 2 13 167 1 169 6.75e-57 186
MsG0580025507.01.T01 AT4G01680 64.122 131 47 0 13 143 1 131 1.34e-56 187
MsG0580025507.01.T01 AT3G12720 63.636 121 44 0 18 138 16 136 2.31e-56 186
MsG0580025507.01.T01 AT1G74430 63.077 130 48 0 13 142 1 130 1.43e-55 182
MsG0580025507.01.T01 AT1G06180 69.828 116 35 0 13 128 1 116 4.75e-55 181
MsG0580025507.01.T01 AT3G47600 65.546 119 41 0 13 131 1 119 8.47e-55 182
MsG0580025507.01.T01 AT3G28470 58.904 146 58 1 13 158 1 144 2.03e-54 181
MsG0580025507.01.T01 AT1G16490 41.841 239 110 6 14 240 4 225 4.51e-54 179
MsG0580025507.01.T01 AT3G13890 64.103 117 42 0 13 129 1 117 8.61e-54 181
MsG0580025507.01.T01 AT5G62470 63.866 119 43 0 13 131 1 119 9.25e-54 181
MsG0580025507.01.T01 AT4G01680 58.741 143 47 1 13 143 1 143 2.72e-53 179
MsG0580025507.01.T01 AT1G63910 60.938 128 50 0 13 140 1 128 3.09e-53 179
MsG0580025507.01.T01 AT5G23000 66.102 118 39 1 13 129 1 118 3.33e-53 178
MsG0580025507.01.T01 AT1G79180 66.667 117 39 0 14 130 4 120 4.02e-53 177
MsG0580025507.01.T01 AT1G08810 64.754 122 43 0 13 134 1 122 1.48e-52 175
MsG0580025507.01.T01 AT1G56160 66.957 115 38 0 14 128 4 118 1.80e-52 176
MsG0580025507.01.T01 AT1G74650 63.866 119 43 0 13 131 1 119 2.76e-52 176
MsG0580025507.01.T01 AT5G62470 63.866 119 42 1 13 131 1 118 4.61e-52 176
MsG0580025507.01.T01 AT5G57620 65.254 118 40 1 13 129 1 118 8.28e-52 175
MsG0580025507.01.T01 AT5G49330 64.655 116 41 0 13 128 1 116 1.61e-51 174
MsG0580025507.01.T01 AT3G62610 66.379 116 39 0 13 128 1 116 1.92e-51 174
MsG0580025507.01.T01 AT4G37780 63.559 118 42 1 13 129 1 118 3.80e-51 172
MsG0580025507.01.T01 AT2G36890 60.630 127 49 1 13 138 1 127 3.94e-51 172
MsG0580025507.01.T01 AT2G36890 60.630 127 49 1 13 138 42 168 8.81e-51 172
MsG0580025507.01.T01 AT3G28910 62.295 122 46 0 13 134 1 122 1.07e-50 172
MsG0580025507.01.T01 AT3G12820 65.517 116 40 0 15 130 5 120 1.15e-50 169
MsG0580025507.01.T01 AT3G13890 59.524 126 42 1 13 129 1 126 1.24e-50 173
MsG0580025507.01.T01 AT1G18710 60.156 128 51 0 13 140 1 128 1.26e-50 170
MsG0580025507.01.T01 AT2G47460 63.793 116 42 0 13 128 1 116 1.39e-50 172
MsG0580025507.01.T01 AT5G65790 64.407 118 41 1 13 129 1 118 5.91e-50 171
MsG0580025507.01.T01 AT3G49690 62.712 118 43 1 13 129 1 118 1.06e-48 166
MsG0580025507.01.T01 AT5G06100 51.799 139 63 2 20 155 28 165 2.11e-47 166
MsG0580025507.01.T01 AT1G79180 51.333 150 40 1 14 130 4 153 6.93e-47 162
MsG0580025507.01.T01 AT5G06100 51.799 139 63 2 20 155 28 165 9.09e-47 166
MsG0580025507.01.T01 AT5G06100 51.799 139 63 2 20 155 28 165 9.09e-47 166
MsG0580025507.01.T01 AT5G06100 51.799 139 63 2 20 155 28 165 9.09e-47 166
MsG0580025507.01.T01 AT5G06100 51.799 139 63 2 20 155 28 165 9.09e-47 166
MsG0580025507.01.T01 AT1G48000 60.833 120 45 1 22 139 30 149 1.39e-46 159
MsG0580025507.01.T01 AT5G40350 55.303 132 58 1 24 154 17 148 2.47e-46 157
MsG0580025507.01.T01 AT5G12870 63.889 108 39 0 24 131 18 125 9.27e-46 157
MsG0580025507.01.T01 AT3G27810 63.889 108 39 0 21 128 17 124 3.40e-45 154
MsG0580025507.01.T01 AT5G55020 61.607 112 42 1 22 133 24 134 4.76e-45 161
MsG0580025507.01.T01 AT2G32460 61.905 105 40 0 23 127 17 121 5.23e-45 160
MsG0580025507.01.T01 AT2G32460 61.905 105 40 0 23 127 5 109 5.41e-45 160
MsG0580025507.01.T01 AT4G26930 59.821 112 44 1 22 133 17 127 5.66e-45 158
MsG0580025507.01.T01 AT3G11440 61.538 104 40 0 24 127 41 144 6.60e-45 160
MsG0580025507.01.T01 AT5G14750 52.027 148 64 3 25 168 17 161 7.62e-45 153
MsG0580025507.01.T01 AT5G40330 62.500 104 39 0 25 128 13 116 8.81e-45 153
MsG0580025507.01.T01 AT3G01530 61.468 109 42 0 20 128 21 129 1.18e-44 152
MsG0580025507.01.T01 AT2G26960 61.111 108 41 1 26 133 22 128 2.30e-44 158
MsG0580025507.01.T01 AT3G11440 61.538 104 40 0 24 127 41 144 3.16e-44 160
MsG0580025507.01.T01 AT3G11440 61.538 104 40 0 24 127 41 144 3.16e-44 160
MsG0580025507.01.T01 AT3G11440 61.538 104 40 0 24 127 41 144 3.16e-44 160
MsG0580025507.01.T01 AT3G30210 64.423 104 37 0 23 126 26 129 7.92e-44 152
MsG0580025507.01.T01 AT5G35550 59.322 118 44 1 24 141 14 127 2.39e-43 150
MsG0580025507.01.T01 AT3G24310 62.617 107 40 0 21 127 15 121 5.67e-43 150
MsG0580025507.01.T01 AT1G25340 57.391 115 49 0 25 139 19 133 9.07e-43 150
MsG0580025507.01.T01 AT3G08500 60.952 105 41 0 24 128 30 134 3.03e-42 150
MsG0580025507.01.T01 AT4G13480 64.078 103 37 0 25 127 7 109 4.26e-42 147
MsG0580025507.01.T01 AT2G47190 55.856 111 49 0 24 134 20 130 4.97e-42 147
MsG0580025507.01.T01 AT3G27920 59.048 105 43 0 25 129 15 119 1.10e-41 145
MsG0580025507.01.T01 AT3G06490 57.480 127 52 1 20 144 15 141 4.87e-41 146
MsG0580025507.01.T01 AT3G48920 60.784 102 40 0 25 126 19 120 1.16e-40 144
MsG0580025507.01.T01 AT5G52600 60.577 104 41 0 24 127 12 115 1.54e-40 141
MsG0580025507.01.T01 AT5G49620 50.345 145 70 1 20 162 22 166 1.85e-40 144
MsG0580025507.01.T01 AT1G68320 55.172 116 52 0 24 139 19 134 1.92e-40 144
MsG0580025507.01.T01 AT3G46130 58.879 107 44 0 21 127 6 112 4.41e-40 142
MsG0580025507.01.T01 AT5G59780 59.223 103 42 0 25 127 9 111 1.05e-39 140
MsG0580025507.01.T01 AT5G26660 65.625 96 32 1 55 150 12 106 4.46e-39 141
MsG0580025507.01.T01 AT4G25560 60.377 106 42 0 25 130 11 116 4.54e-39 140
MsG0580025507.01.T01 AT3G53200 58.879 107 44 0 21 127 6 112 5.36e-39 139
MsG0580025507.01.T01 AT1G25340 54.783 115 47 1 25 139 19 128 3.19e-38 138
MsG0580025507.01.T01 AT5G52260 61.321 106 41 0 25 130 13 118 6.83e-38 137
MsG0580025507.01.T01 AT1G25340 54.783 115 47 1 25 139 19 128 7.21e-38 137
MsG0580025507.01.T01 AT1G66370 55.652 115 47 1 13 127 1 111 1.78e-37 135
MsG0580025507.01.T01 AT5G49620 45.912 159 70 2 20 162 22 180 8.38e-37 135
MsG0580025507.01.T01 AT1G66380 59.048 105 43 0 23 127 7 111 1.75e-34 124
MsG0580025507.01.T01 AT3G60460 50.459 109 52 2 24 131 11 118 1.90e-34 128
MsG0580025507.01.T01 AT1G56650 59.048 105 43 0 23 127 7 111 8.63e-34 125
MsG0580025507.01.T01 AT1G66390 57.143 105 45 0 23 127 7 111 9.00e-33 122
MsG0580025507.01.T01 AT2G26950 50.926 108 52 1 26 133 18 124 4.06e-32 124
MsG0580025507.01.T01 AT3G47600 68.000 75 24 0 57 131 39 113 2.46e-31 120
MsG0580025507.01.T01 AT5G40350 53.535 99 45 1 57 154 5 103 5.58e-31 115
MsG0580025507.01.T01 AT5G35550 60.440 91 32 1 51 141 44 130 5.68e-31 118
MsG0580025507.01.T01 AT3G12820 71.831 71 20 0 60 130 2 72 7.81e-31 115
MsG0580025507.01.T01 AT5G59780 69.863 73 22 0 55 127 18 90 2.11e-30 115
MsG0580025507.01.T01 AT3G46130 69.863 73 22 0 55 127 18 90 4.20e-30 115
MsG0580025507.01.T01 AT5G14750 57.447 94 36 2 60 152 18 108 5.72e-30 113
MsG0580025507.01.T01 AT3G27810 66.667 72 24 0 57 128 4 75 6.14e-30 113
MsG0580025507.01.T01 AT2G39880 55.882 102 44 1 26 127 50 150 6.71e-30 117
MsG0580025507.01.T01 AT3G53200 69.863 73 22 0 55 127 7 79 7.86e-30 113
MsG0580025507.01.T01 AT3G46130 69.444 72 22 0 56 127 9 80 9.04e-30 114
MsG0580025507.01.T01 AT5G02320 50.485 103 50 1 26 128 127 228 1.32e-29 119
MsG0580025507.01.T01 AT5G02320 50.485 103 50 1 26 128 127 228 1.32e-29 119
MsG0580025507.01.T01 AT1G22640 72.464 69 19 0 71 139 2 70 1.42e-29 112
MsG0580025507.01.T01 AT5G02320 50.485 103 50 1 26 128 67 168 1.83e-29 118
MsG0580025507.01.T01 AT3G55730 52.830 106 49 1 26 131 56 160 2.68e-29 116
MsG0580025507.01.T01 AT5G58850 50.000 102 50 1 26 127 105 205 6.17e-29 116
MsG0580025507.01.T01 AT1G18960 42.742 124 65 3 26 149 10 127 7.20e-29 114
MsG0580025507.01.T01 AT3G09370 50.000 102 50 1 26 127 135 235 1.29e-28 116
MsG0580025507.01.T01 AT3G09370 47.414 116 56 2 26 137 130 244 1.30e-28 116
MsG0580025507.01.T01 AT3G09370 50.000 102 50 1 26 127 143 243 1.69e-28 115
MsG0580025507.01.T01 AT5G11050 43.697 119 63 2 9 127 91 205 2.20e-28 114
MsG0580025507.01.T01 AT4G18770 43.200 125 70 1 26 150 217 340 3.57e-28 114
MsG0580025507.01.T01 AT3G09230 48.077 104 53 1 26 129 55 157 4.77e-28 113
MsG0580025507.01.T01 AT3G50060 48.039 102 52 1 26 127 6 106 6.61e-28 111
MsG0580025507.01.T01 AT4G32730 47.573 103 53 1 26 128 87 188 3.62e-27 113
MsG0580025507.01.T01 AT4G32730 34.000 100 64 2 26 124 35 133 6.23e-12 67.4
MsG0580025507.01.T01 AT4G32730 47.573 103 53 1 26 128 87 188 3.62e-27 113
MsG0580025507.01.T01 AT4G32730 34.000 100 64 2 26 124 35 133 6.23e-12 67.4
MsG0580025507.01.T01 AT4G32730 47.573 103 53 1 26 128 87 188 3.62e-27 113
MsG0580025507.01.T01 AT4G32730 34.000 100 64 2 26 124 35 133 6.23e-12 67.4
MsG0580025507.01.T01 AT4G32730 47.573 103 53 1 26 128 87 188 3.62e-27 113
MsG0580025507.01.T01 AT4G32730 34.000 100 64 2 26 124 35 133 6.23e-12 67.4
MsG0580025507.01.T01 AT4G32730 47.573 103 53 1 26 128 87 188 4.40e-27 112
MsG0580025507.01.T01 AT4G32730 34.000 100 64 2 26 124 35 133 7.00e-12 67.0
MsG0580025507.01.T01 AT5G11510 30.303 264 162 8 26 281 81 330 4.42e-27 112
MsG0580025507.01.T01 AT2G23290 50.980 102 49 1 26 127 13 113 5.15e-27 108
MsG0580025507.01.T01 AT5G11510 30.303 264 162 8 26 281 81 330 5.48e-27 112
MsG0580025507.01.T01 AT5G11510 30.303 264 162 8 26 281 81 330 6.97e-27 112
MsG0580025507.01.T01 AT5G11510 30.303 264 162 8 26 281 81 330 6.97e-27 112
MsG0580025507.01.T01 AT5G11510 30.303 264 162 8 26 281 81 330 6.97e-27 112
MsG0580025507.01.T01 AT4G37260 49.020 102 51 1 26 127 13 113 9.47e-27 108
MsG0580025507.01.T01 AT3G27785 39.333 150 73 4 24 168 187 323 2.33e-26 109
MsG0580025507.01.T01 AT5G67300 48.039 102 52 1 26 127 6 106 3.30e-26 106
MsG0580025507.01.T01 AT5G40360 43.689 103 57 1 24 126 156 257 7.57e-26 106
MsG0580025507.01.T01 AT1G71030 53.247 77 36 0 63 139 5 81 2.36e-25 101
MsG0580025507.01.T01 AT1G71030 53.247 77 36 0 63 139 19 95 3.08e-25 101
MsG0580025507.01.T01 AT1G69560 36.905 168 94 4 23 189 104 260 1.13e-24 102
MsG0580025507.01.T01 AT1G69560 36.905 168 94 4 23 189 120 276 1.19e-24 103
MsG0580025507.01.T01 AT3G23250 48.649 111 43 2 71 167 2 112 1.28e-23 97.8
MsG0580025507.01.T01 AT1G17950 44.118 102 56 1 26 127 5 105 1.40e-23 98.2
MsG0580025507.01.T01 AT1G66380 63.889 72 26 0 56 127 7 78 1.73e-23 94.0
MsG0580025507.01.T01 AT2G25230 39.669 121 72 1 12 132 12 131 4.53e-23 96.3
MsG0580025507.01.T01 AT1G26780 44.118 102 56 1 26 127 98 198 1.77e-22 95.9
MsG0580025507.01.T01 AT1G26780 44.118 102 56 1 26 127 98 198 2.67e-22 96.7
MsG0580025507.01.T01 AT1G73410 42.500 120 62 2 22 141 2 114 5.99e-22 93.6
MsG0580025507.01.T01 AT1G73410 42.500 120 62 2 22 141 2 114 8.10e-22 92.0
MsG0580025507.01.T01 AT3G29020 36.000 125 73 2 26 144 65 188 2.62e-21 91.7
MsG0580025507.01.T01 AT1G66380 55.696 79 35 0 23 101 7 85 4.81e-21 87.4
MsG0580025507.01.T01 AT5G14750 53.012 83 35 2 71 152 2 81 5.42e-21 88.2
MsG0580025507.01.T01 AT5G14750 53.012 83 35 2 71 152 2 81 5.42e-21 88.2
MsG0580025507.01.T01 AT3G29020 40.777 103 60 1 26 128 67 168 7.79e-21 91.7
MsG0580025507.01.T01 AT2G37630 45.833 96 50 1 29 122 7 102 7.98e-21 92.8
MsG0580025507.01.T01 AT5G17800 43.137 102 57 1 26 127 93 193 8.78e-21 92.0
MsG0580025507.01.T01 AT4G33450 37.168 113 65 2 15 127 13 119 1.18e-20 90.1
MsG0580025507.01.T01 AT4G00540 41.284 109 60 2 23 128 100 207 1.50e-19 89.4
MsG0580025507.01.T01 AT4G00540 41.284 109 60 2 23 128 98 205 2.40e-19 89.0
MsG0580025507.01.T01 AT5G40430 37.615 109 66 2 24 132 52 158 2.15e-18 84.0
MsG0580025507.01.T01 AT5G61420 70.833 48 14 0 93 140 2 49 1.48e-17 82.0
MsG0580025507.01.T01 AT1G14350 38.384 99 60 1 29 127 28 125 1.82e-17 83.6
MsG0580025507.01.T01 AT1G14350 38.384 99 60 1 29 127 28 125 1.82e-17 83.6
MsG0580025507.01.T01 AT5G39700 42.708 96 54 1 27 122 57 151 2.18e-17 79.7
MsG0580025507.01.T01 AT4G28110 73.810 42 11 0 100 141 4 45 3.37e-16 76.6
MsG0580025507.01.T01 AT5G15310 70.455 44 13 0 100 143 9 52 4.58e-16 77.4
MsG0580025507.01.T01 AT2G02820 35.354 99 63 1 29 127 33 130 2.56e-15 77.4
MsG0580025507.01.T01 AT2G02820 35.354 99 63 1 29 127 33 130 3.61e-15 76.6
MsG0580025507.01.T01 AT5G14340 63.830 47 17 0 100 146 10 56 4.34e-15 73.2
MsG0580025507.01.T01 AT2G02820 35.354 99 63 1 29 127 33 130 5.18e-15 75.5
MsG0580025507.01.T01 AT5G59780 65.217 46 16 0 82 127 1 46 1.50e-14 71.2
MsG0580025507.01.T01 AT4G25560 67.391 46 15 0 85 130 5 50 1.51e-14 72.4
MsG0580025507.01.T01 AT3G46130 65.217 46 16 0 82 127 1 46 3.00e-14 70.9
MsG0580025507.01.T01 AT1G22640 70.000 40 12 0 100 139 16 55 3.28e-13 67.8
MsG0580025507.01.T01 AT3G18100 33.058 121 73 3 7 120 472 591 3.09e-12 68.2
MsG0580025507.01.T01 AT3G18100 33.058 121 73 3 7 120 520 639 3.49e-12 68.2
MsG0580025507.01.T01 AT3G18100 33.058 121 73 3 7 120 359 478 5.26e-12 67.4
MsG0580025507.01.T01 AT1G74650 60.465 43 17 0 89 131 1 43 5.37e-12 65.5
MsG0580025507.01.T01 AT3G18100 33.058 121 73 3 7 120 307 426 5.39e-12 67.4
MsG0580025507.01.T01 AT1G74430 50.000 54 27 0 89 142 8 61 8.62e-12 63.9
MsG0580025507.01.T01 AT3G28910 56.522 46 20 0 89 134 1 46 1.24e-11 64.3

Find 76 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTTGGCTTGTGAGTTTC+AGG 0.124801 5:-19766449 None:intergenic
TTCACTGTGCAATATTATTA+TGG 0.128812 5:+19765803 MsG0580025507.01.T01:CDS
ACAAACATGGCCATGGAAAT+TGG 0.172972 5:+19765910 MsG0580025507.01.T01:CDS
CAAGTTACCAAATGAATTAT+TGG 0.200841 5:-19766621 None:intergenic
TCACCACCACTCAAACTTAA+TGG 0.223472 5:-19766740 None:intergenic
AACCCTAGTTTATACTCTTA+TGG 0.226899 5:+19766776 MsG0580025507.01.T01:CDS
CAATAATTCATTTGGTAACT+TGG 0.256156 5:+19766622 MsG0580025507.01.T01:CDS
TGATTGAAAATTCCAGTTCT+AGG 0.257401 5:-19766932 None:intergenic
AGATCTTGATTATAGCAAAA+TGG 0.266341 5:+19766850 MsG0580025507.01.T01:CDS
ATAACGAGATAAAGAATTAT+TGG 0.272931 5:+19766384 MsG0580025507.01.T01:CDS
AATTTCCCTCTCTTGATATC+AGG 0.313386 5:-19766008 None:intergenic
CAAACATGGCCATGGAAATT+GGG 0.315080 5:+19765911 MsG0580025507.01.T01:CDS
AGAAAATCTACTTCCTGCTT+TGG 0.327301 5:+19766898 MsG0580025507.01.T01:CDS
ATGAATACCAATAATTCATT+TGG 0.331994 5:+19766614 MsG0580025507.01.T01:CDS
ATATTCCCTAAGGGGTTATA+AGG 0.339967 5:-19766653 None:intergenic
AGGTGATTGTAATCAGTTCT+TGG 0.348925 5:-19766464 None:intergenic
AAAATTGCAGCTCATCTTCC+AGG 0.357488 5:+19766353 MsG0580025507.01.T01:CDS
CAAATGCAATCTTTGATGAA+TGG 0.368377 5:+19767005 MsG0580025507.01.T01:CDS
TCATCTTCTTCTTGTGTCCA+TGG 0.370739 5:-19765867 None:intergenic
TCACTGTGCAATATTATTAT+GGG 0.372110 5:+19765804 MsG0580025507.01.T01:CDS
CAAAGCGTGCTGGTTTGAAT+AGG 0.372184 5:+19765943 MsG0580025507.01.T01:CDS
GTTGCTTCCTCTCCTAGAAC+TGG 0.376485 5:+19766920 MsG0580025507.01.T01:CDS
ATAGGTGTGGGAAGAGTTGT+AGG 0.377058 5:+19765961 MsG0580025507.01.T01:CDS
AATTATCCTTATAACCCCTT+AGG 0.378309 5:+19766647 MsG0580025507.01.T01:CDS
TTACTTGGCATGTCAAATAT+AGG 0.382706 5:+19766503 MsG0580025507.01.T01:CDS
ATCAACCTTCATTCAGTACT+TGG 0.383770 5:+19766056 MsG0580025507.01.T01:CDS
AAATGCAATCTTTGATGAAT+GGG 0.387848 5:+19767006 MsG0580025507.01.T01:CDS
AATCAAGTGGTGGCTCCTAC+TGG 0.398129 5:+19767047 MsG0580025507.01.T01:CDS
GATCTTGATTATAGCAAAAT+GGG 0.401633 5:+19766851 MsG0580025507.01.T01:CDS
GTGGGAAGAGTTGTAGGTTA+AGG 0.418094 5:+19765967 MsG0580025507.01.T01:CDS
AATAATTCATTTGGTAACTT+GGG 0.423937 5:+19766623 MsG0580025507.01.T01:CDS
ATGAGTCTTTCAAACTTACT+TGG 0.438102 5:+19766488 MsG0580025507.01.T01:CDS
TCATCAAAGATTGCATTTGA+AGG 0.444624 5:-19767001 None:intergenic
ATTATCCTTATAACCCCTTA+GGG 0.471963 5:+19766648 MsG0580025507.01.T01:CDS
TCAAAGCTGGATATTTCAAA+AGG 0.472267 5:+19766812 MsG0580025507.01.T01:CDS
TGTCCATAAGAGTATAAACT+AGG 0.478465 5:-19766779 None:intergenic
ATCTCGTTATCTGTTCGTCC+TGG 0.479112 5:-19766371 None:intergenic
GGAGAGGAAGCAACCAAAGC+AGG 0.484843 5:-19766911 None:intergenic
ATTATTGGAACACAAACATA+AGG 0.499952 5:+19766399 MsG0580025507.01.T01:CDS
AAATTGAATGGATTAAAGCT+AGG 0.500163 5:-19766680 None:intergenic
TGTTTCCAAGTACTGAATGA+AGG 0.504557 5:-19766061 None:intergenic
AATTGAATGGATTAAAGCTA+GGG 0.513125 5:-19766679 None:intergenic
ACAAAGTGAGTCTTCAAAGC+TGG 0.515723 5:+19766799 MsG0580025507.01.T01:CDS
GCTAGGGTTAATATTCCCTA+AGG 0.516564 5:-19766663 None:intergenic
GTAAGTTTGAAAGACTCATA+AGG 0.528357 5:-19766484 None:intergenic
CTAGGGTTAATATTCCCTAA+GGG 0.537885 5:-19766662 None:intergenic
AAAGTGTTCCCCAATTTCCA+TGG 0.538619 5:-19765920 None:intergenic
AAGCTGGATATTTCAAAAGG+TGG 0.539184 5:+19766815 MsG0580025507.01.T01:CDS
GGAACACTTTCAAAGCGTGC+TGG 0.539535 5:+19765933 MsG0580025507.01.T01:CDS
ATAATTCATTTGGTAACTTG+GGG 0.539650 5:+19766624 MsG0580025507.01.T01:CDS
GGAAGAGTTGTAGGTTAAGG+TGG 0.542911 5:+19765970 MsG0580025507.01.T01:CDS
TATATCAACAAACATGGCCA+TGG 0.555092 5:+19765903 MsG0580025507.01.T01:CDS
ATTTGAAGGTGAGTGATCAA+TGG 0.559476 5:-19766987 None:intergenic
AAACATGGCCATGGAAATTG+GGG 0.562809 5:+19765912 MsG0580025507.01.T01:CDS
GTCCATAAGAGTATAAACTA+GGG 0.567531 5:-19766778 None:intergenic
TTGAGACCTGATATCAAGAG+AGG 0.581244 5:+19766002 MsG0580025507.01.T01:CDS
AATGAGCCATTAAGTTTGAG+TGG 0.592575 5:+19766734 MsG0580025507.01.T01:CDS
TCACCATGTTGTGATGAGAT+TGG 0.596582 5:+19765831 MsG0580025507.01.T01:CDS
CACCACTTGATTCATCATCA+AGG 0.599804 5:-19767036 None:intergenic
TGAGACCTGATATCAAGAGA+GGG 0.607779 5:+19766003 MsG0580025507.01.T01:CDS
GATGAGATTGGTGTAAAGAA+AGG 0.608348 5:+19765843 MsG0580025507.01.T01:CDS
CTCTAAAAGCTCTTTCCAGT+AGG 0.609003 5:-19767062 None:intergenic
ATGAGATTGGTGTAAAGAAA+GGG 0.612763 5:+19765844 MsG0580025507.01.T01:CDS
TATCTTGTTGTAAACCAAGA+GGG 0.613559 5:-19766544 None:intergenic
TTGGTGTAAAGAAAGGGCCA+TGG 0.623416 5:+19765850 MsG0580025507.01.T01:CDS
GAAAATTCCAGTTCTAGGAG+AGG 0.625567 5:-19766927 None:intergenic
CGTGCTGGTTTGAATAGGTG+TGG 0.635864 5:+19765948 MsG0580025507.01.T01:CDS
TAGGGTTAATATTCCCTAAG+GGG 0.636230 5:-19766661 None:intergenic
TGTGCAATATTATTATGGGT+AGG 0.658465 5:+19765808 MsG0580025507.01.T01:CDS
ATATCTTGTTGTAAACCAAG+AGG 0.662547 5:-19766545 None:intergenic
ATTGATTATATCAACAAACA+TGG 0.672369 5:+19765897 MsG0580025507.01.T01:CDS
CTTGATGATGAATCAAGTGG+TGG 0.674841 5:+19767037 MsG0580025507.01.T01:CDS
ACACCAATCTCATCACAACA+TGG 0.675221 5:-19765834 None:intergenic
TTCCTTGATGATGAATCAAG+TGG 0.687990 5:+19767034 MsG0580025507.01.T01:CDS
GTGCTGGTTTGAATAGGTGT+GGG 0.691156 5:+19765949 MsG0580025507.01.T01:CDS
GAGCCATTAAGTTTGAGTGG+TGG 0.713030 5:+19766737 MsG0580025507.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAAATTTTTCTAGTAAAA+GGG - Chr5:19766143-19766162 None:intergenic 15.0%
!!! TTTCAAATTTTTCTAGTAAA+AGG - Chr5:19766144-19766163 None:intergenic 15.0%
!!! TTTTTTTTTATTTGTCTTGT+AGG + Chr5:19766324-19766343 MsG0580025507.01.T01:intron 15.0%
!! ATAACGAGATAAAGAATTAT+TGG + Chr5:19766384-19766403 MsG0580025507.01.T01:CDS 20.0%
!! ATCAAAGGTAAAAAAGAAAT+TGG - Chr5:19766249-19766268 None:intergenic 20.0%
!! ATGAATACCAATAATTCATT+TGG + Chr5:19766614-19766633 MsG0580025507.01.T01:CDS 20.0%
!! ATTGATTATATCAACAAACA+TGG + Chr5:19765897-19765916 MsG0580025507.01.T01:CDS 20.0%
!!! AATAATTCATTTGGTAACTT+GGG + Chr5:19766623-19766642 MsG0580025507.01.T01:CDS 20.0%
! AAATGCAATCTTTGATGAAT+GGG + Chr5:19767006-19767025 MsG0580025507.01.T01:CDS 25.0%
! AGATCTTGATTATAGCAAAA+TGG + Chr5:19766850-19766869 MsG0580025507.01.T01:CDS 25.0%
! ATTATTGGAACACAAACATA+AGG + Chr5:19766399-19766418 MsG0580025507.01.T01:CDS 25.0%
! CAAGTTACCAAATGAATTAT+TGG - Chr5:19766624-19766643 None:intergenic 25.0%
! CCATTCAAAAACAAATTGAA+TGG - Chr5:19766695-19766714 None:intergenic 25.0%
! GAAATATTGACGAAAATCAA+AGG - Chr5:19766264-19766283 None:intergenic 25.0%
! GATCTTGATTATAGCAAAAT+GGG + Chr5:19766851-19766870 MsG0580025507.01.T01:CDS 25.0%
! TCACTGTGCAATATTATTAT+GGG + Chr5:19765804-19765823 MsG0580025507.01.T01:CDS 25.0%
! TTCACTGTGCAATATTATTA+TGG + Chr5:19765803-19765822 MsG0580025507.01.T01:CDS 25.0%
!! AACTGGAATTTTCAATCAAA+TGG + Chr5:19766937-19766956 MsG0580025507.01.T01:CDS 25.0%
!! AGAAAAATTTGAAATAGCGA+TGG + Chr5:19766150-19766169 MsG0580025507.01.T01:intron 25.0%
!! ATAATTCATTTGGTAACTTG+GGG + Chr5:19766624-19766643 MsG0580025507.01.T01:CDS 25.0%
!! ATTTTGCAACAATTGCATTT+TGG - Chr5:19766582-19766601 None:intergenic 25.0%
!! CAATAATTCATTTGGTAACT+TGG + Chr5:19766622-19766641 MsG0580025507.01.T01:CDS 25.0%
!!! AAATTGAATGGATTAAAGCT+AGG - Chr5:19766683-19766702 None:intergenic 25.0%
!!! AATTGAATGGATTAAAGCTA+GGG - Chr5:19766682-19766701 None:intergenic 25.0%
!!! CCATTCAATTTGTTTTTGAA+TGG + Chr5:19766692-19766711 MsG0580025507.01.T01:CDS 25.0%
!!! TTTTTTATTTGTCTTGTAGG+TGG + Chr5:19766327-19766346 MsG0580025507.01.T01:intron 25.0%
AACCCTAGTTTATACTCTTA+TGG + Chr5:19766776-19766795 MsG0580025507.01.T01:CDS 30.0%
AATTATCCTTATAACCCCTT+AGG + Chr5:19766647-19766666 MsG0580025507.01.T01:CDS 30.0%
ATGAGATTGGTGTAAAGAAA+GGG + Chr5:19765844-19765863 MsG0580025507.01.T01:CDS 30.0%
ATGAGTCTTTCAAACTTACT+TGG + Chr5:19766488-19766507 MsG0580025507.01.T01:CDS 30.0%
ATTATCCTTATAACCCCTTA+GGG + Chr5:19766648-19766667 MsG0580025507.01.T01:CDS 30.0%
CAAATGCAATCTTTGATGAA+TGG + Chr5:19767005-19767024 MsG0580025507.01.T01:CDS 30.0%
GTAAGTTTGAAAGACTCATA+AGG - Chr5:19766487-19766506 None:intergenic 30.0%
TCAAAGCTGGATATTTCAAA+AGG + Chr5:19766812-19766831 MsG0580025507.01.T01:CDS 30.0%
TCATCAAAGATTGCATTTGA+AGG - Chr5:19767004-19767023 None:intergenic 30.0%
TGATTGAAAATTCCAGTTCT+AGG - Chr5:19766935-19766954 None:intergenic 30.0%
TGTGCAATATTATTATGGGT+AGG + Chr5:19765808-19765827 MsG0580025507.01.T01:CDS 30.0%
TTACTTGGCATGTCAAATAT+AGG + Chr5:19766503-19766522 MsG0580025507.01.T01:CDS 30.0%
! ATATCTTGTTGTAAACCAAG+AGG - Chr5:19766548-19766567 None:intergenic 30.0%
! GTCCATAAGAGTATAAACTA+GGG - Chr5:19766781-19766800 None:intergenic 30.0%
! TATCTTGTTGTAAACCAAGA+GGG - Chr5:19766547-19766566 None:intergenic 30.0%
! TGTCCATAAGAGTATAAACT+AGG - Chr5:19766782-19766801 None:intergenic 30.0%
AAGCTGGATATTTCAAAAGG+TGG + Chr5:19766815-19766834 MsG0580025507.01.T01:CDS 35.0%
AAGGAAAAAGCTTCTCAAGA+TGG + Chr5:19766418-19766437 MsG0580025507.01.T01:CDS 35.0%
AATGAGCCATTAAGTTTGAG+TGG + Chr5:19766734-19766753 MsG0580025507.01.T01:CDS 35.0%
AATTTCCCTCTCTTGATATC+AGG - Chr5:19766011-19766030 None:intergenic 35.0%
AGAAAATCTACTTCCTGCTT+TGG + Chr5:19766898-19766917 MsG0580025507.01.T01:CDS 35.0%
AGGAAAAAGCTTCTCAAGAT+GGG + Chr5:19766419-19766438 MsG0580025507.01.T01:CDS 35.0%
AGGTGATTGTAATCAGTTCT+TGG - Chr5:19766467-19766486 None:intergenic 35.0%
ATATTCCCTAAGGGGTTATA+AGG - Chr5:19766656-19766675 None:intergenic 35.0%
ATCAACCTTCATTCAGTACT+TGG + Chr5:19766056-19766075 MsG0580025507.01.T01:CDS 35.0%
ATTTGAAGGTGAGTGATCAA+TGG - Chr5:19766990-19767009 None:intergenic 35.0%
CTAGGGTTAATATTCCCTAA+GGG - Chr5:19766665-19766684 None:intergenic 35.0%
GATGAGATTGGTGTAAAGAA+AGG + Chr5:19765843-19765862 MsG0580025507.01.T01:CDS 35.0%
TAGGGTTAATATTCCCTAAG+GGG - Chr5:19766664-19766683 None:intergenic 35.0%
TATATCAACAAACATGGCCA+TGG + Chr5:19765903-19765922 MsG0580025507.01.T01:CDS 35.0%
!! TGTTTCCAAGTACTGAATGA+AGG - Chr5:19766064-19766083 None:intergenic 35.0%
!! TTCCTTGATGATGAATCAAG+TGG + Chr5:19767034-19767053 MsG0580025507.01.T01:CDS 35.0%
AAAATTGCAGCTCATCTTCC+AGG + Chr5:19766353-19766372 MsG0580025507.01.T01:CDS 40.0%
AAACATGGCCATGGAAATTG+GGG + Chr5:19765912-19765931 MsG0580025507.01.T01:CDS 40.0%
ACAAACATGGCCATGGAAAT+TGG + Chr5:19765910-19765929 MsG0580025507.01.T01:CDS 40.0%
ACAAAGTGAGTCTTCAAAGC+TGG + Chr5:19766799-19766818 MsG0580025507.01.T01:CDS 40.0%
ACACCAATCTCATCACAACA+TGG - Chr5:19765837-19765856 None:intergenic 40.0%
CAAACATGGCCATGGAAATT+GGG + Chr5:19765911-19765930 MsG0580025507.01.T01:CDS 40.0%
CACCACTTGATTCATCATCA+AGG - Chr5:19767039-19767058 None:intergenic 40.0%
GCTAGGGTTAATATTCCCTA+AGG - Chr5:19766666-19766685 None:intergenic 40.0%
TCACCACCACTCAAACTTAA+TGG - Chr5:19766743-19766762 None:intergenic 40.0%
TCACCATGTTGTGATGAGAT+TGG + Chr5:19765831-19765850 MsG0580025507.01.T01:CDS 40.0%
TCATCTTCTTCTTGTGTCCA+TGG - Chr5:19765870-19765889 None:intergenic 40.0%
TGAGACCTGATATCAAGAGA+GGG + Chr5:19766003-19766022 MsG0580025507.01.T01:CDS 40.0%
TTGAGACCTGATATCAAGAG+AGG + Chr5:19766002-19766021 MsG0580025507.01.T01:CDS 40.0%
! AAAGTGTTCCCCAATTTCCA+TGG - Chr5:19765923-19765942 None:intergenic 40.0%
! ACTTTTAGCAACAACCCTCT+TGG + Chr5:19766530-19766549 MsG0580025507.01.T01:CDS 40.0%
! CTCTAAAAGCTCTTTCCAGT+AGG - Chr5:19767065-19767084 None:intergenic 40.0%
!! CTTGATGATGAATCAAGTGG+TGG + Chr5:19767037-19767056 MsG0580025507.01.T01:CDS 40.0%
!! GAAAATTCCAGTTCTAGGAG+AGG - Chr5:19766930-19766949 None:intergenic 40.0%
!!! ACAATTGCATTTTGGCTAGG+TGG - Chr5:19766574-19766593 None:intergenic 40.0%
!!! CAATTGCATTTTGGCTAGGT+GGG - Chr5:19766573-19766592 None:intergenic 40.0%
!!! GCAACAATTGCATTTTGGCT+AGG - Chr5:19766577-19766596 None:intergenic 40.0%
ATAGGTGTGGGAAGAGTTGT+AGG + Chr5:19765961-19765980 MsG0580025507.01.T01:CDS 45.0%
ATCTCGTTATCTGTTCGTCC+TGG - Chr5:19766374-19766393 None:intergenic 45.0%
GAGCCATTAAGTTTGAGTGG+TGG + Chr5:19766737-19766756 MsG0580025507.01.T01:CDS 45.0%
GGAAGAGTTGTAGGTTAAGG+TGG + Chr5:19765970-19765989 MsG0580025507.01.T01:CDS 45.0%
GTGGGAAGAGTTGTAGGTTA+AGG + Chr5:19765967-19765986 MsG0580025507.01.T01:CDS 45.0%
TTGGTGTAAAGAAAGGGCCA+TGG + Chr5:19765850-19765869 MsG0580025507.01.T01:CDS 45.0%
!! CAAAGCGTGCTGGTTTGAAT+AGG + Chr5:19765943-19765962 MsG0580025507.01.T01:CDS 45.0%
!! GTGCTGGTTTGAATAGGTGT+GGG + Chr5:19765949-19765968 MsG0580025507.01.T01:CDS 45.0%
!! GTTCTTGGCTTGTGAGTTTC+AGG - Chr5:19766452-19766471 None:intergenic 45.0%
AATCAAGTGGTGGCTCCTAC+TGG + Chr5:19767047-19767066 MsG0580025507.01.T01:CDS 50.0%
GGAACACTTTCAAAGCGTGC+TGG + Chr5:19765933-19765952 MsG0580025507.01.T01:CDS 50.0%
GTTGCTTCCTCTCCTAGAAC+TGG + Chr5:19766920-19766939 MsG0580025507.01.T01:CDS 50.0%
!! CGTGCTGGTTTGAATAGGTG+TGG + Chr5:19765948-19765967 MsG0580025507.01.T01:CDS 50.0%
GGAGAGGAAGCAACCAAAGC+AGG - Chr5:19766914-19766933 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 19765786 19767087 19765786 ID=MsG0580025507.01;Name=MsG0580025507.01
Chr5 mRNA 19765786 19767087 19765786 ID=MsG0580025507.01.T01;Parent=MsG0580025507.01;Name=MsG0580025507.01.T01;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|346
Chr5 exon 19765786 19766084 19765786 ID=MsG0580025507.01.T01:exon:8332;Parent=MsG0580025507.01.T01
Chr5 exon 19766346 19767087 19766346 ID=MsG0580025507.01.T01:exon:8333;Parent=MsG0580025507.01.T01
Chr5 CDS 19765786 19766084 19765786 ID=MsG0580025507.01.T01:cds;Parent=MsG0580025507.01.T01
Chr5 CDS 19766346 19767087 19766346 ID=MsG0580025507.01.T01:cds;Parent=MsG0580025507.01.T01
Gene Sequence

>MsG0580025507.01.T01

TTGTCTTGGAACATTAATTCACTGTGCAATATTATTATGGGTAGGTCACCATGTTGTGATGAGATTGGTGTAAAGAAAGGGCCATGGACACAAGAAGAAGATGAGAAGCTGATTGATTATATCAACAAACATGGCCATGGAAATTGGGGAACACTTTCAAAGCGTGCTGGTTTGAATAGGTGTGGGAAGAGTTGTAGGTTAAGGTGGACAAATTATTTGAGACCTGATATCAAGAGAGGGAAATTCACTGATGAAGAAGAAAGAGTTATCATCAACCTTCATTCAGTACTTGGAAACAAGTGGTCGAAAATTGCAGCTCATCTTCCAGGACGAACAGATAACGAGATAAAGAATTATTGGAACACAAACATAAGGAAAAAGCTTCTCAAGATGGGAATTGATCCTGAAACTCACAAGCCAAGAACTGATTACAATCACCTTATGAGTCTTTCAAACTTACTTGGCATGTCAAATATAGGCAATACTTTTAGCAACAACCCTCTTGGTTTACAACAAGATATTACCCACCTAGCCAAAATGCAATTGTTGCAAAATATGTTGCAAATTATGAATACCAATAATTCATTTGGTAACTTGGGGAATTATCCTTATAACCCCTTAGGGAATATTAACCCTAGCTTTAATCCATTCAATTTGTTTTTGAATGGAACAAACACAATTCAAACTAATGAGCCATTAAGTTTGAGTGGTGGTGAAGAATATGCTATGAACCCTAGTTTATACTCTTATGGACAAAGTGAGTCTTCAAAGCTGGATATTTCAAAAGGTGGATCAAGTTTACAAGATCTTGATTATAGCAAAATGGGAAGCATTTCATGTGAAAATCAAGAAGAAAATCTACTTCCTGCTTTGGTTGCTTCCTCTCCTAGAACTGGAATTTTCAATCAAATGGAAAATGATTGTAACAAAGCTCAAATGTCCATTGATCACTCACCTTCAAATGCAATCTTTGATGAATGGGAGAAGTTCCTTGATGATGAATCAAGTGGTGGCTCCTACTGGAAAGAGCTTTTAGAGTAA

Protein sequence

>MsG0580025507.01.T01

LSWNINSLCNIIMGRSPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKMGIDPETHKPRTDYNHLMSLSNLLGMSNIGNTFSNNPLGLQQDITHLAKMQLLQNMLQIMNTNNSFGNLGNYPYNPLGNINPSFNPFNLFLNGTNTIQTNEPLSLSGGEEYAMNPSLYSYGQSESSKLDISKGGSSLQDLDYSKMGSISCENQEENLLPALVASSPRTGIFNQMENDCNKAQMSIDHSPSNAIFDEWEKFLDDESSGGSYWKELLE*