AlfalfaGEDB | MsG0280007908.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007908.01

KEGG: -
GO: GO:0006952 GO:0009607
PFAM: PF00407

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007908.01.T01	P93333.1	99.363	157	1	0	1	157	1	157	2.39E-105	308

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007908.01.T01	P93333	99.363	157	1	0	1	157	1	157	2.98E-108	308

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007908.01.T01	Q7FNV7	99.363	157	1	0	1	157	1	157	1.14e-105	308

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049016.01	MsG0280007908.01	-0.800949	1.133489e-48	5.346963e-46
MsG0180001084.01	MsG0280007908.01	0.807119	5.906490e-50	3.262503e-47
MsG0180001533.01	MsG0280007908.01	0.823262	1.522556e-53	1.304440e-50
MsG0180003237.01	MsG0280007908.01	0.841647	4.186936e-58	6.191973e-55
MsG0180003320.01	MsG0280007908.01	0.808677	2.753304e-50	1.584079e-47
MsG0180003452.01	MsG0280007908.01	0.805194	1.501374e-49	7.893439e-47
MsG0180003604.01	MsG0280007908.01	0.816502	5.349998e-52	3.797383e-49
MsG0180004302.01	MsG0280007908.01	-0.802381	5.763576e-49	2.819354e-46
MsG0180004424.01	MsG0280007908.01	0.819049	1.424071e-52	1.084152e-49
MsG0180004937.01	MsG0280007908.01	-0.844452	7.496282e-59	1.210669e-55
MsG0180005648.01	MsG0280007908.01	0.852132	5.641229e-61	1.167344e-57
MsG0280006442.01	MsG0280007908.01	0.811549	6.623913e-51	4.112227e-48
MsG0280007869.01	MsG0280007908.01	0.848252	6.898999e-60	1.258403e-56
MsG0280007906.01	MsG0280007908.01	0.944426	1.993930e-103	2.855547e-98
MsG0280007908.01	MsG0280007909.01	0.847724	9.649100e-60	1.730761e-56
MsG0280007908.01	MsG0280007911.01	0.866781	2.218088e-65	7.567623e-62
MsG0280007908.01	MsG0280010005.01	0.812643	3.823457e-51	2.444196e-48
MsG0280007908.01	MsG0280010802.01	0.803907	2.785779e-49	1.416978e-46
MsG0280007908.01	MsG0380012654.01	0.812077	5.082209e-51	3.199990e-48
MsG0280007908.01	MsG0380016086.01	0.873104	1.903422e-67	8.160632e-64
MsG0280007908.01	MsG0380017168.01	0.802257	6.113945e-49	2.981134e-46
MsG0280007908.01	MsG0380018070.01	0.820803	5.655407e-53	4.520460e-50
MsG0280007908.01	MsG0480018521.01	0.898774	3.816361e-77	4.580303e-73
MsG0280007908.01	MsG0480018522.01	0.939304	1.592865e-99	1.623498e-94
MsG0280007908.01	MsG0480018621.01	0.800043	1.734306e-48	7.994749e-46
MsG0280007908.01	MsG0480018693.01	0.815764	7.820383e-52	5.440539e-49
MsG0280007908.01	MsG0480019348.01	0.807703	4.439823e-50	2.489980e-47
MsG0280007908.01	MsG0480022300.01	-0.811597	6.464059e-51	4.017943e-48
MsG0280007908.01	MsG0480022309.01	0.813544	2.425888e-51	1.588832e-48
MsG0280007908.01	MsG0480022311.01	0.804928	1.706876e-49	8.913391e-47
MsG0280007908.01	MsG0480022833.01	0.805398	1.360793e-49	7.191893e-47
MsG0280007908.01	MsG0480023102.01	0.816235	6.140228e-52	4.326749e-49
MsG0280007908.01	MsG0580024086.01	0.841378	4.927027e-58	7.226412e-55
MsG0280007908.01	MsG0580024138.01	0.807741	4.359379e-50	2.447366e-47
MsG0280007908.01	MsG0580024202.01	0.857095	2.061368e-62	5.029122e-59
MsG0280007908.01	MsG0580024207.01	0.855136	7.725505e-62	1.765613e-58
MsG0280007908.01	MsG0580024217.01	0.861090	1.309875e-63	3.661866e-60
MsG0280007908.01	MsG0580024219.01	0.834920	2.267882e-56	2.730524e-53
MsG0280007908.01	MsG0580024408.01	0.811084	8.354361e-51	5.123506e-48
MsG0280007908.01	MsG0580024986.01	0.885927	5.327043e-72	3.726406e-68
MsG0280007908.01	MsG0580024990.01	0.888135	7.720846e-73	5.906271e-69
MsG0280007908.01	MsG0580025965.01	0.900441	7.306501e-78	9.453335e-74
MsG0280007908.01	MsG0580027751.01	0.819087	1.395953e-52	1.063818e-49
MsG0280007908.01	MsG0580029291.01	0.840108	1.060394e-57	1.495209e-54
MsG0280007908.01	MsG0580029706.01	-0.810409	1.169646e-50	7.044672e-48
MsG0280007908.01	MsG0580029820.01	-0.801546	8.555107e-49	4.096704e-46
MsG0280007908.01	MsG0580030135.01	0.838418	2.910742e-57	3.896277e-54
MsG0280007908.01	MsG0680030379.01	0.802983	4.330606e-49	2.150884e-46
MsG0280007908.01	MsG0680031009.01	0.830887	2.280128e-55	2.434300e-52
MsG0280007908.01	MsG0680031200.01	0.811283	7.565694e-51	4.663912e-48
MsG0280007908.01	MsG0680032026.01	0.821521	3.863263e-53	3.150176e-50
MsG0280007908.01	MsG0680032461.01	0.809844	1.547980e-50	9.187020e-48
MsG0280007908.01	MsG0680034980.01	0.803835	2.883075e-49	1.463716e-46
MsG0280007908.01	MsG0780035932.01	0.810124	1.347508e-50	8.055859e-48
MsG0280007908.01	MsG0780036472.01	0.802464	5.542540e-49	2.716796e-46
MsG0280007908.01	MsG0780036925.01	-0.807497	4.911800e-50	2.740040e-47
MsG0280007908.01	MsG0780038963.01	0.881256	2.792629e-70	1.624446e-66
MsG0280007908.01	MsG0780040615.01	0.882303	1.166747e-70	7.070847e-67
MsG0280007908.01	MsG0780041034.01	0.813636	2.314793e-51	1.519803e-48
MsG0280007908.01	MsG0780041218.01	-0.814938	1.193770e-51	8.118626e-49
MsG0280007908.01	MsG0780041447.01	0.825704	4.054176e-54	3.723558e-51
MsG0280007908.01	MsG0880046856.01	-0.807602	4.664292e-50	2.608921e-47
MsG0280007908.01	MsG0880047460.01	0.821641	3.623777e-53	2.964941e-50
MsG0280007908.01	MsG0880047542.01	0.821897	3.162919e-53	2.606859e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007908.01.T01	MTR_2g035100	99.363	157	1	0	1	157	1	157	2.90e-109	308
MsG0280007908.01.T01	MTR_2g035105	98.089	157	3	0	1	157	1	157	6.47e-108	304
MsG0280007908.01.T01	MTR_2g035130	88.535	157	18	0	1	157	1	157	3.93e-97	277
MsG0280007908.01.T01	MTR_2g035150	84.713	157	24	0	1	157	1	157	2.25e-93	268
MsG0280007908.01.T01	MTR_2g035120	83.439	157	26	0	1	157	1	157	3.53e-93	267
MsG0280007908.01.T01	MTR_6g033450	71.975	157	44	0	1	157	1	157	2.13e-79	232
MsG0280007908.01.T01	MTR_4g120970	71.975	157	44	0	1	157	1	157	2.13e-79	232
MsG0280007908.01.T01	MTR_2g035320	65.605	157	54	0	1	157	1	157	2.81e-69	206
MsG0280007908.01.T01	MTR_2g035190	61.783	157	60	0	1	157	1	157	6.19e-66	198
MsG0280007908.01.T01	MTR_2g035210	61.146	157	61	0	1	157	1	157	9.87e-65	195
MsG0280007908.01.T01	MTR_2g035220	61.783	157	60	0	1	157	1	157	9.72e-64	192
MsG0280007908.01.T01	MTR_2g035170	59.873	157	63	0	1	157	1	157	4.58e-62	188
MsG0280007908.01.T01	MTR_2g435310	40.385	156	92	1	1	155	1	156	7.90e-39	129
MsG0280007908.01.T01	MTR_2g035320	63.542	96	35	0	62	157	27	122	5.07e-37	124
MsG0280007908.01.T01	MTR_4g120760	39.744	156	93	1	1	155	1	156	1.94e-36	123
MsG0280007908.01.T01	MTR_4g120760	39.744	156	93	1	1	155	1	156	2.21e-36	123
MsG0280007908.01.T01	MTR_4g120950	44.720	161	82	5	1	157	1	158	2.65e-33	115
MsG0280007908.01.T01	MTR_4g120940	62.500	88	30	1	70	157	35	119	2.50e-30	106

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 45 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACGAAAGTAAGTTTCTTGA+TGG	0.287513	2:-22782903	None:intergenic
AGCTATATGCTTTAGTAATC+AGG	0.289844	2:-22784255	None:intergenic
CCCTTGATTTCCTCTTCACT+TGG	0.329042	2:-22784174	None:intergenic
CTTCAACAATTTCAATACTT+TGG	0.342783	2:-22782862	None:intergenic
ATCAATAACCTTTGGGATAA+GGG	0.353978	2:-22782834	None:intergenic
GGATGGCATCAATAACCTTT+GGG	0.355456	2:-22782841	None:intergenic
ACTTGGTGCAGCATCACCTT+TGG	0.357443	2:-22784157	None:intergenic
GAGATCTTCTCCACTGTGTC+TGG	0.364866	2:-22784066	None:intergenic
TGGATGGCATCAATAACCTT+TGG	0.369451	2:-22782842	None:intergenic
AAGAAACTTACTTTCGTTGA+AGG	0.370871	2:+22782908	MsG0280007908.01.T01:CDS
GGCTCTTGAAGGTTACGTTT+TGG	0.372797	2:+22784227	MsG0280007908.01.T01:CDS
CATCAATAACCTTTGGGATA+AGG	0.374566	2:-22782835	None:intergenic
AGTAAGTTTCTTGATGGTTC+CGG	0.383147	2:-22782897	None:intergenic
CAAAGTATTGAAATTGTTGA+AGG	0.421501	2:+22782863	MsG0280007908.01.T01:CDS
TATATAATTCATTATCATCA+TGG	0.424718	2:+22782730	MsG0280007908.01.T01:exon
GCTTACAACTACAGCATAGT+TGG	0.432371	2:+22784030	MsG0280007908.01.T01:CDS
CATGGGTGTCTTCAACTTTG+AGG	0.436771	2:+22782748	MsG0280007908.01.T01:exon
AACAATTTCAATACTTTGGA+TGG	0.439896	2:-22782858	None:intergenic
ATTGAAATTGTTGAAGGAAA+CGG	0.445615	2:+22782869	MsG0280007908.01.T01:CDS
TTTGAGTCTAAATTGTCTGC+AGG	0.453113	2:+22784090	MsG0280007908.01.T01:CDS
TTTGCAATGGATCCTCCATC+TGG	0.453770	2:-22784114	None:intergenic
TACAGCATAGTTGGTGGTGG+TGG	0.475041	2:+22784039	MsG0280007908.01.T01:CDS
AGAGCTTTGTAAAGTCTAGC+AGG	0.480944	2:-22782794	None:intergenic
ACCAAGTGAAGAGGAAATCA+AGG	0.498836	2:+22784173	MsG0280007908.01.T01:CDS
TTGCTTGCTTGCTTTATACA+TGG	0.499671	2:+22784280	MsG0280007908.01.T01:three_prime_UTR
ATATAATTCATTATCATCAT+GGG	0.524327	2:+22782731	MsG0280007908.01.T01:exon
AAAGTATGATTTGCACAAAG+TGG	0.527363	2:+22783984	MsG0280007908.01.T01:CDS
TTTCACAGTAAGCTTTGCAA+TGG	0.527944	2:-22784127	None:intergenic
GTTGAAGGAAACGGTGGCGC+CGG	0.542615	2:+22782878	MsG0280007908.01.T01:CDS
TGCAGACAATTTAGACTCAA+AGG	0.553148	2:-22784088	None:intergenic
AAATTGTCTGCAGGGCCAGA+TGG	0.558648	2:+22784099	MsG0280007908.01.T01:CDS
GGTGGCAAAGCTAGAGGTGA+TGG	0.567538	2:+22784195	MsG0280007908.01.T01:CDS
TTCTGATACCCTTATCCCAA+AGG	0.569991	2:+22782826	MsG0280007908.01.T01:CDS
TTGAGTCTAAATTGTCTGCA+GGG	0.579973	2:+22784091	MsG0280007908.01.T01:CDS
TGATGCTGCACCAAGTGAAG+AGG	0.603594	2:+22784164	MsG0280007908.01.T01:CDS
TTGTCTGCAGGGCCAGATGG+AGG	0.618761	2:+22784102	MsG0280007908.01.T01:CDS
TACAACTACAGCATAGTTGG+TGG	0.619903	2:+22784033	MsG0280007908.01.T01:CDS
AACTACAGCATAGTTGGTGG+TGG	0.623337	2:+22784036	MsG0280007908.01.T01:CDS
ATCAAGGGTGGCAAAGCTAG+AGG	0.623874	2:+22784189	MsG0280007908.01.T01:CDS
AGCAGGAGCTACAATAGATG+TGG	0.635518	2:-22782777	None:intergenic
ACTGTGAAATACTTCACCAA+AGG	0.653868	2:+22784141	MsG0280007908.01.T01:CDS
CCAAGTGAAGAGGAAATCAA+GGG	0.664848	2:+22784174	MsG0280007908.01.T01:CDS
GAAATTGTTGAAGGAAACGG+TGG	0.666040	2:+22782872	MsG0280007908.01.T01:CDS
AGTGAAGAGGAAATCAAGGG+TGG	0.695634	2:+22784177	MsG0280007908.01.T01:CDS
TGGTGGACTTCCAGACACAG+TGG	0.739823	2:+22784056	MsG0280007908.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAACATTTTATTATACATA+GGG	-	Chr2:22782986-22783005	None:intergenic	10.0%
!!!	TTAAACATTTTATTATACAT+AGG	-	Chr2:22782987-22783006	None:intergenic	10.0%
!!	ATATAATTCATTATCATCAT+GGG	+	Chr2:22782731-22782750	MsG0280007908.01.T01:exon	15.0%
!!	TATATAATTCATTATCATCA+TGG	+	Chr2:22782730-22782749	MsG0280007908.01.T01:exon	15.0%
!!!	ATATTGGATTTTTTTTTTGA+AGG	+	Chr2:22783698-22783717	MsG0280007908.01.T01:intron	15.0%
!!!	TTTTTGAAGGAATTATATAT+TGG	+	Chr2:22783711-22783730	MsG0280007908.01.T01:intron	15.0%
!!	AAACTACCAATATAAGTATT+TGG	-	Chr2:22783320-22783339	None:intergenic	20.0%
!!	AAGATACATAACATAAATAG+TGG	+	Chr2:22783386-22783405	MsG0280007908.01.T01:intron	20.0%
!!	CTACATTGAAATTTCATAAT+TGG	-	Chr2:22783172-22783191	None:intergenic	20.0%
!!	TAATATGTGAAAAATTGAAG+TGG	+	Chr2:22782943-22782962	MsG0280007908.01.T01:intron	20.0%
!!!	ACAGTTTTTTTTTTTTGGTT+AGG	-	Chr2:22783577-22783596	None:intergenic	20.0%
!!!	AGTTTTTAAATAGCCTTATT+TGG	-	Chr2:22783545-22783564	None:intergenic	20.0%
!!!	GAGAAACAGTTTTTTTTTTT+TGG	-	Chr2:22783582-22783601	None:intergenic	20.0%
!!!	TTTTTACCGTAAAACAATAT+GGG	+	Chr2:22783345-22783364	MsG0280007908.01.T01:intron	20.0%
!!!	TTTTTTACCGTAAAACAATA+TGG	+	Chr2:22783344-22783363	MsG0280007908.01.T01:intron	20.0%
!	AACAAGAATCAACAATTTGA+TGG	-	Chr2:22783643-22783662	None:intergenic	25.0%
!	AACAATTTCAATACTTTGGA+TGG	-	Chr2:22782861-22782880	None:intergenic	25.0%
!	ATTCACCATAATACCAAATA+AGG	+	Chr2:22783529-22783548	MsG0280007908.01.T01:intron	25.0%
!	ATTGAAATTGTTGAAGGAAA+CGG	+	Chr2:22782869-22782888	MsG0280007908.01.T01:CDS	25.0%
!	CATTGAAATTTCATAATTGG+AGG	-	Chr2:22783169-22783188	None:intergenic	25.0%
!	CTTCAACAATTTCAATACTT+TGG	-	Chr2:22782865-22782884	None:intergenic	25.0%
!	TATGTCTTTCTATGGTTTAA+TGG	+	Chr2:22783459-22783478	MsG0280007908.01.T01:intron	25.0%
!!	AAAATAATTTTACACCACAG+TGG	-	Chr2:22783489-22783508	None:intergenic	25.0%
!!	ATACTTATATTGGTAGTTTC+AGG	+	Chr2:22783321-22783340	MsG0280007908.01.T01:intron	25.0%
!!!	AATAGCCTTATTTGGTATTA+TGG	-	Chr2:22783537-22783556	None:intergenic	25.0%
!!!	AATTAACCGTCTTTATTTTC+AGG	-	Chr2:22783049-22783068	None:intergenic	25.0%
!!!	CAAAGTATTGAAATTGTTGA+AGG	+	Chr2:22782863-22782882	MsG0280007908.01.T01:CDS	25.0%
!!!	TTGTTTCCCATATTGTTTTA+CGG	-	Chr2:22783354-22783373	None:intergenic	25.0%
	AAACCATAGAAAGACATAGA+TGG	-	Chr2:22783457-22783476	None:intergenic	30.0%
	AACGAAAGTAAGTTTCTTGA+TGG	-	Chr2:22782906-22782925	None:intergenic	30.0%
	AACGTATCAATTAAATGTGC+AGG	+	Chr2:22783952-22783971	MsG0280007908.01.T01:intron	30.0%
	AAGAAACTTACTTTCGTTGA+AGG	+	Chr2:22782908-22782927	MsG0280007908.01.T01:CDS	30.0%
	AGCTATATGCTTTAGTAATC+AGG	-	Chr2:22784258-22784277	None:intergenic	30.0%
	AGTAACTATATCGATCGATT+TGG	+	Chr2:22783204-22783223	MsG0280007908.01.T01:intron	30.0%
	ATACTAGAGCATGTTTAAGA+TGG	+	Chr2:22783092-22783111	MsG0280007908.01.T01:intron	30.0%
	CCATATCCTGAAAATAAAGA+CGG	+	Chr2:22783040-22783059	MsG0280007908.01.T01:intron	30.0%
	TTACCATCTATGTCTTTCTA+TGG	+	Chr2:22783451-22783470	MsG0280007908.01.T01:intron	30.0%
	TTTCACAATCACAAACATCA+TGG	-	Chr2:22783934-22783953	None:intergenic	30.0%
!	AAAGTATGATTTGCACAAAG+TGG	+	Chr2:22783984-22784003	MsG0280007908.01.T01:CDS	30.0%
!	TACTAGAGCATGTTTAAGAT+GGG	+	Chr2:22783093-22783112	MsG0280007908.01.T01:intron	30.0%
!!	ATCAATAACCTTTGGGATAA+GGG	-	Chr2:22782837-22782856	None:intergenic	30.0%
	ACTGTGAAATACTTCACCAA+AGG	+	Chr2:22784141-22784160	MsG0280007908.01.T01:CDS	35.0%
	ATGAGATTACTCTCAACATG+CGG	+	Chr2:22783291-22783310	MsG0280007908.01.T01:intron	35.0%
	CGGCTACCAAATACTTATAT+TGG	+	Chr2:22783311-22783330	MsG0280007908.01.T01:intron	35.0%
	GAATTGTCATAGTTGTCACA+CGG	-	Chr2:22783513-22783532	None:intergenic	35.0%
	GTATCAATTAAATGTGCAGG+TGG	+	Chr2:22783955-22783974	MsG0280007908.01.T01:intron	35.0%
	TGCAGACAATTTAGACTCAA+AGG	-	Chr2:22784091-22784110	None:intergenic	35.0%
	TGCATGCAGTGAAAATTGTA+TGG	-	Chr2:22783018-22783037	None:intergenic	35.0%
	TTGAGTCTAAATTGTCTGCA+GGG	+	Chr2:22784091-22784110	MsG0280007908.01.T01:CDS	35.0%
	TTGCTTGCTTGCTTTATACA+TGG	+	Chr2:22784280-22784299	MsG0280007908.01.T01:three_prime_UTR	35.0%
	TTTCACAGTAAGCTTTGCAA+TGG	-	Chr2:22784130-22784149	None:intergenic	35.0%
	TTTGAGTCTAAATTGTCTGC+AGG	+	Chr2:22784090-22784109	MsG0280007908.01.T01:CDS	35.0%
!	AGTAAGTTTCTTGATGGTTC+CGG	-	Chr2:22782900-22782919	None:intergenic	35.0%
!!	CATCAATAACCTTTGGGATA+AGG	-	Chr2:22782838-22782857	None:intergenic	35.0%
!!	GGAGATCACTTAGTTCTATT+AGG	-	Chr2:22783913-22783932	None:intergenic	35.0%
!!!	CCGTCTTTATTTTCAGGATA+TGG	-	Chr2:22783043-22783062	None:intergenic	35.0%
	ACCAAGTGAAGAGGAAATCA+AGG	+	Chr2:22784173-22784192	MsG0280007908.01.T01:CDS	40.0%
	CCAAGTGAAGAGGAAATCAA+GGG	+	Chr2:22784174-22784193	MsG0280007908.01.T01:CDS	40.0%
	GAAATTGTTGAAGGAAACGG+TGG	+	Chr2:22782872-22782891	MsG0280007908.01.T01:CDS	40.0%
	GCTTACAACTACAGCATAGT+TGG	+	Chr2:22784030-22784049	MsG0280007908.01.T01:CDS	40.0%
	GGATGGCATCAATAACCTTT+GGG	-	Chr2:22782844-22782863	None:intergenic	40.0%
	TACAACTACAGCATAGTTGG+TGG	+	Chr2:22784033-22784052	MsG0280007908.01.T01:CDS	40.0%
	TGGATGGCATCAATAACCTT+TGG	-	Chr2:22782845-22782864	None:intergenic	40.0%
	TGTTGAGAGTAATCTCATCG+CGG	-	Chr2:22783289-22783308	None:intergenic	40.0%
	TTCTGATACCCTTATCCCAA+AGG	+	Chr2:22782826-22782845	MsG0280007908.01.T01:CDS	40.0%
!	AGAGCTTTGTAAAGTCTAGC+AGG	-	Chr2:22782797-22782816	None:intergenic	40.0%
!!	TAGAGGTGATGGTCTTTTCA+AGG	+	Chr2:22784206-22784225	MsG0280007908.01.T01:CDS	40.0%
	AGCAGGAGCTACAATAGATG+TGG	-	Chr2:22782780-22782799	None:intergenic	45.0%
	AGTGAAGAGGAAATCAAGGG+TGG	+	Chr2:22784177-22784196	MsG0280007908.01.T01:CDS	45.0%
	CATGGGTGTCTTCAACTTTG+AGG	+	Chr2:22782748-22782767	MsG0280007908.01.T01:exon	45.0%
	CCCTTGATTTCCTCTTCACT+TGG	-	Chr2:22784177-22784196	None:intergenic	45.0%
	GGTTTAATGGAGATCCACTG+TGG	+	Chr2:22783472-22783491	MsG0280007908.01.T01:intron	45.0%
	TTTGCAATGGATCCTCCATC+TGG	-	Chr2:22784117-22784136	None:intergenic	45.0%
!	CATGTTTAAGATGGGTCGAC+TGG	+	Chr2:22783101-22783120	MsG0280007908.01.T01:intron	45.0%
!	GGCTCTTGAAGGTTACGTTT+TGG	+	Chr2:22784227-22784246	MsG0280007908.01.T01:CDS	45.0%
!!	AACTACAGCATAGTTGGTGG+TGG	+	Chr2:22784036-22784055	MsG0280007908.01.T01:CDS	45.0%
!!	GGTCTTTTCAAGGCTCTTGA+AGG	+	Chr2:22784216-22784235	MsG0280007908.01.T01:CDS	45.0%
!!	AATATATAATAAAATAAAAG+AGG	-	Chr2:22783683-22783702	None:intergenic	5.0%
!!	ATATATAATAAAATAAAAGA+GGG	-	Chr2:22783682-22783701	None:intergenic	5.0%
!!!	TCTTTTATTTTATTATATAT+TGG	+	Chr2:22783682-22783701	MsG0280007908.01.T01:intron	5.0%
	AAATTGTCTGCAGGGCCAGA+TGG	+	Chr2:22784099-22784118	MsG0280007908.01.T01:CDS	50.0%
	ATCAAGGGTGGCAAAGCTAG+AGG	+	Chr2:22784189-22784208	MsG0280007908.01.T01:CDS	50.0%
	GAGATCTTCTCCACTGTGTC+TGG	-	Chr2:22784069-22784088	None:intergenic	50.0%
	TGATGCTGCACCAAGTGAAG+AGG	+	Chr2:22784164-22784183	MsG0280007908.01.T01:CDS	50.0%
!!	ACTTGGTGCAGCATCACCTT+TGG	-	Chr2:22784160-22784179	None:intergenic	50.0%
!!	TACAGCATAGTTGGTGGTGG+TGG	+	Chr2:22784039-22784058	MsG0280007908.01.T01:CDS	50.0%
	GGTGGCAAAGCTAGAGGTGA+TGG	+	Chr2:22784195-22784214	MsG0280007908.01.T01:CDS	55.0%
!!	TGGTGGACTTCCAGACACAG+TGG	+	Chr2:22784056-22784075	MsG0280007908.01.T01:CDS	55.0%
	GTTGAAGGAAACGGTGGCGC+CGG	+	Chr2:22782878-22782897	MsG0280007908.01.T01:CDS	60.0%
	TTGTCTGCAGGGCCAGATGG+AGG	+	Chr2:22784102-22784121	MsG0280007908.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	22782678	22784309	22782678	ID=MsG0280007908.01;Name=MsG0280007908.01
Chr2	mRNA	22782678	22784309	22782678	ID=MsG0280007908.01.T01;Parent=MsG0280007908.01;Name=MsG0280007908.01.T01;_AED=0.49;_eAED=0.49;_QI=71\|1\|1\|1\|1\|1\|2\|43\|157
Chr2	exon	22782678	22782929	22782678	ID=MsG0280007908.01.T01:exon:13868;Parent=MsG0280007908.01.T01
Chr2	exon	22783974	22784309	22783974	ID=MsG0280007908.01.T01:exon:13869;Parent=MsG0280007908.01.T01
Chr2	five_prime_UTR	22782678	22782748	22782678	ID=MsG0280007908.01.T01:five_prime_utr;Parent=MsG0280007908.01.T01
Chr2	CDS	22782749	22782929	22782749	ID=MsG0280007908.01.T01:cds;Parent=MsG0280007908.01.T01
Chr2	CDS	22783974	22784266	22783974	ID=MsG0280007908.01.T01:cds;Parent=MsG0280007908.01.T01
Chr2	three_prime_UTR	22784267	22784309	22784267	ID=MsG0280007908.01.T01:three_prime_utr;Parent=MsG0280007908.01.T01

Gene Sequence

>MsG0280007908.01.T01

ATGGGTGTCTTCAACTTTGAGGATGAAACCACATCTATTGTAGCTCCTGCTAGACTTTACAAAGCTCTAGTTACAGATTCTGATACCCTTATCCCAAAGGTTATTGATGCCATCCAAAGTATTGAAATTGTTGAAGGAAACGGTGGCGCCGGAACCATCAAGAAACTTACTTTCGTTGAAGGTGGTGAAACAAAGTATGATTTGCACAAAGTGGACTTAGTAGATGATGTTAACTTTGCTTACAACTACAGCATAGTTGGTGGTGGTGGACTTCCAGACACAGTGGAGAAGATCTCCTTTGAGTCTAAATTGTCTGCAGGGCCAGATGGAGGATCCATTGCAAAGCTTACTGTGAAATACTTCACCAAAGGTGATGCTGCACCAAGTGAAGAGGAAATCAAGGGTGGCAAAGCTAGAGGTGATGGTCTTTTCAAGGCTCTTGAAGGTTACGTTTTGGCAAATCCTGATTACTAA

Protein sequence

>MsG0280007908.01.T01

MGVFNFEDETTSIVAPARLYKALVTDSDTLIPKVIDAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPDTVEKISFESKLSAGPDGGSIAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPDY*