Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047542.01.T01 | RHN64815.1 | 97.08 | 411 | 11 | 1 | 1 | 411 | 1 | 410 | 0 | 829 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047542.01.T01 | A0A396ILS3 | 97.080 | 411 | 11 | 1 | 1 | 411 | 1 | 410 | 0.0 | 829 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0880047542.01 | 0.819672 | 1.027213e-52 | 7.956374e-50 |
| MsG0080048595.01 | MsG0880047542.01 | 0.821168 | 4.658930e-53 | 3.762040e-50 |
| MsG0080048813.01 | MsG0880047542.01 | -0.805116 | 1.559078e-49 | 8.180456e-47 |
| MsG0080048992.01 | MsG0880047542.01 | -0.834732 | 2.528030e-56 | 3.026162e-53 |
| MsG0080049015.01 | MsG0880047542.01 | -0.816822 | 4.535350e-52 | 3.247658e-49 |
| MsG0080049016.01 | MsG0880047542.01 | -0.803322 | 3.685016e-49 | 1.846219e-46 |
| MsG0080049018.01 | MsG0880047542.01 | -0.809949 | 1.469520e-50 | 8.745366e-48 |
| MsG0180000138.01 | MsG0880047542.01 | 0.801462 | 8.902862e-49 | 4.254217e-46 |
| MsG0180000367.01 | MsG0880047542.01 | 0.801313 | 9.548764e-49 | 4.545896e-46 |
| MsG0180000399.01 | MsG0880047542.01 | 0.829846 | 4.096831e-55 | 4.243929e-52 |
| MsG0180000502.01 | MsG0880047542.01 | -0.814427 | 1.549016e-51 | 1.039098e-48 |
| MsG0180000723.01 | MsG0880047542.01 | 0.822669 | 2.093702e-53 | 1.764016e-50 |
| MsG0180000929.01 | MsG0880047542.01 | 0.804509 | 2.087626e-49 | 1.078317e-46 |
| MsG0180001054.01 | MsG0880047542.01 | -0.830849 | 2.329796e-55 | 2.484473e-52 |
| MsG0180001072.01 | MsG0880047542.01 | -0.819709 | 1.007371e-52 | 7.810928e-50 |
| MsG0180001084.01 | MsG0880047542.01 | 0.806439 | 8.221957e-50 | 4.462738e-47 |
| MsG0180001533.01 | MsG0880047542.01 | 0.854732 | 1.012114e-61 | 2.282360e-58 |
| MsG0180001797.01 | MsG0880047542.01 | 0.811090 | 8.328801e-51 | 5.108623e-48 |
| MsG0880044715.01 | MsG0880047542.01 | -0.804826 | 1.792602e-49 | 9.336303e-47 |
| MsG0880044968.01 | MsG0880047542.01 | -0.820931 | 5.282956e-53 | 4.238002e-50 |
| MsG0880045369.01 | MsG0880047542.01 | -0.812790 | 3.550887e-51 | 2.278592e-48 |
| MsG0880045385.01 | MsG0880047542.01 | -0.814729 | 1.328556e-51 | 8.984740e-49 |
| MsG0880045677.01 | MsG0880047542.01 | 0.811174 | 7.989980e-51 | 4.911432e-48 |
| MsG0880045755.01 | MsG0880047542.01 | -0.836550 | 8.762136e-57 | 1.107901e-53 |
| MsG0880045991.01 | MsG0880047542.01 | 0.836167 | 1.096776e-56 | 1.371056e-53 |
| MsG0880046189.01 | MsG0880047542.01 | -0.808165 | 3.540842e-50 | 2.010186e-47 |
| MsG0880046402.01 | MsG0880047542.01 | 0.800396 | 1.470189e-48 | 6.838260e-46 |
| MsG0880046429.01 | MsG0880047542.01 | 0.813257 | 2.805057e-51 | 1.822735e-48 |
| MsG0880046469.01 | MsG0880047542.01 | -0.824194 | 9.213238e-54 | 8.103907e-51 |
| MsG0880046814.01 | MsG0880047542.01 | -0.819412 | 1.177093e-52 | 9.051559e-50 |
| MsG0880046856.01 | MsG0880047542.01 | -0.819805 | 9.578638e-53 | 7.447248e-50 |
| MsG0880046961.01 | MsG0880047542.01 | 0.811075 | 8.390976e-51 | 5.144666e-48 |
| MsG0880047251.01 | MsG0880047542.01 | -0.855905 | 4.609315e-62 | 1.080788e-58 |
| MsG0880047398.01 | MsG0880047542.01 | 0.824971 | 6.044298e-54 | 5.436844e-51 |
| MsG0880047406.01 | MsG0880047542.01 | -0.807030 | 6.168418e-50 | 3.399467e-47 |
| MsG0880047542.01 | MsG0880047664.01 | 0.805993 | 1.020803e-49 | 5.478319e-47 |
| MsG0880047542.01 | MsG0880047697.01 | 0.807693 | 4.461496e-50 | 2.501429e-47 |
| MsG0180002935.01 | MsG0880047542.01 | 0.842290 | 2.831105e-58 | 4.272615e-55 |
| MsG0180003235.01 | MsG0880047542.01 | 0.825734 | 3.987446e-54 | 3.665405e-51 |
| MsG0180003372.01 | MsG0880047542.01 | 0.803549 | 3.305839e-49 | 1.666103e-46 |
| MsG0180003605.01 | MsG0880047542.01 | -0.819305 | 1.245456e-52 | 9.547821e-50 |
| MsG0180003757.01 | MsG0880047542.01 | -0.810593 | 1.067177e-50 | 6.459471e-48 |
| MsG0180004187.01 | MsG0880047542.01 | -0.803973 | 2.699245e-49 | 1.375271e-46 |
| MsG0180004302.01 | MsG0880047542.01 | -0.813672 | 2.273916e-51 | 1.494416e-48 |
| MsG0180004424.01 | MsG0880047542.01 | 0.804367 | 2.235148e-49 | 1.150350e-46 |
| MsG0180004502.01 | MsG0880047542.01 | -0.802068 | 6.684696e-49 | 3.243813e-46 |
| MsG0180004937.01 | MsG0880047542.01 | -0.811954 | 5.405793e-51 | 3.392327e-48 |
| MsG0180004957.01 | MsG0880047542.01 | -0.818045 | 2.405752e-52 | 1.781303e-49 |
| MsG0180006212.01 | MsG0880047542.01 | -0.800980 | 1.117010e-48 | 5.273515e-46 |
| MsG0280006442.01 | MsG0880047542.01 | 0.814731 | 1.327071e-51 | 8.975218e-49 |
| MsG0280006451.01 | MsG0880047542.01 | -0.817026 | 4.080997e-52 | 2.938794e-49 |
| MsG0780040321.01 | MsG0880047542.01 | -0.834758 | 2.490846e-56 | 2.984006e-53 |
| MsG0780040615.01 | MsG0880047542.01 | 0.826778 | 2.251261e-54 | 2.131727e-51 |
| MsG0780040702.01 | MsG0880047542.01 | -0.802111 | 6.550411e-49 | 3.182042e-46 |
| MsG0780040977.01 | MsG0880047542.01 | 0.825797 | 3.853649e-54 | 3.548829e-51 |
| MsG0780040991.01 | MsG0880047542.01 | 0.824409 | 8.199730e-54 | 7.256229e-51 |
| MsG0780041121.01 | MsG0880047542.01 | -0.804903 | 1.727931e-49 | 9.017602e-47 |
| MsG0780041447.01 | MsG0880047542.01 | 0.804360 | 2.242763e-49 | 1.154066e-46 |
| MsG0780041615.01 | MsG0880047542.01 | -0.810885 | 9.226625e-51 | 5.628839e-48 |
| MsG0780041620.01 | MsG0880047542.01 | -0.803961 | 2.714406e-49 | 1.382572e-46 |
| MsG0780041720.01 | MsG0880047542.01 | -0.806419 | 8.300308e-50 | 4.502983e-47 |
| MsG0780041783.01 | MsG0880047542.01 | -0.813010 | 3.177462e-51 | 2.051053e-48 |
| MsG0880041978.01 | MsG0880047542.01 | 0.822694 | 2.065830e-53 | 1.741754e-50 |
| MsG0880042740.01 | MsG0880047542.01 | 0.802712 | 4.926683e-49 | 2.430260e-46 |
| MsG0880042895.01 | MsG0880047542.01 | -0.847633 | 1.022010e-59 | 1.827920e-56 |
| MsG0880042921.01 | MsG0880047542.01 | -0.822093 | 2.849007e-53 | 2.361108e-50 |
| MsG0880043017.01 | MsG0880047542.01 | 0.822917 | 1.832995e-53 | 1.555267e-50 |
| MsG0880043364.01 | MsG0880047542.01 | 0.822542 | 2.240152e-53 | 1.880709e-50 |
| MsG0880043481.01 | MsG0880047542.01 | 0.818555 | 1.843780e-52 | 1.384611e-49 |
| MsG0280010802.01 | MsG0880047542.01 | 0.823426 | 1.393782e-53 | 1.199619e-50 |
| MsG0280010994.01 | MsG0880047542.01 | -0.814944 | 1.190238e-51 | 8.095834e-49 |
| MsG0280011449.01 | MsG0880047542.01 | -0.837682 | 4.499521e-57 | 5.889666e-54 |
| MsG0380011635.01 | MsG0880047542.01 | 0.824335 | 8.534056e-54 | 7.536409e-51 |
| MsG0380011686.01 | MsG0880047542.01 | 0.807559 | 4.763945e-50 | 2.661722e-47 |
| MsG0380011974.01 | MsG0880047542.01 | 0.800166 | 1.637355e-48 | 7.571189e-46 |
| MsG0380012444.01 | MsG0880047542.01 | -0.825232 | 5.243552e-54 | 4.751700e-51 |
| MsG0380012654.01 | MsG0880047542.01 | 0.812910 | 3.341991e-51 | 2.151447e-48 |
| MsG0680031009.01 | MsG0880047542.01 | 0.851385 | 9.186228e-61 | 1.856248e-57 |
| MsG0680032026.01 | MsG0880047542.01 | 0.814431 | 1.546331e-51 | 1.037401e-48 |
| MsG0680034229.01 | MsG0880047542.01 | -0.807616 | 4.634337e-50 | 2.593105e-47 |
| MsG0680034255.01 | MsG0880047542.01 | 0.810562 | 1.083657e-50 | 6.553733e-48 |
| MsG0680034316.01 | MsG0880047542.01 | 0.843010 | 1.822418e-58 | 2.812707e-55 |
| MsG0680034317.01 | MsG0880047542.01 | 0.812362 | 4.405066e-51 | 2.795184e-48 |
| MsG0480018521.01 | MsG0880047542.01 | 0.861049 | 1.347399e-63 | 3.761216e-60 |
| MsG0480018522.01 | MsG0880047542.01 | 0.873868 | 1.053331e-67 | 4.642085e-64 |
| MsG0480018628.01 | MsG0880047542.01 | -0.801274 | 9.727308e-49 | 4.626334e-46 |
| MsG0480019861.01 | MsG0880047542.01 | -0.842263 | 2.877758e-58 | 4.339409e-55 |
| MsG0480019923.01 | MsG0880047542.01 | 0.806179 | 9.328257e-50 | 5.030007e-47 |
| MsG0480020958.01 | MsG0880047542.01 | 0.800731 | 1.256087e-48 | 5.892251e-46 |
| MsG0480021151.01 | MsG0880047542.01 | -0.808638 | 2.807214e-50 | 1.613415e-47 |
| MsG0480021327.01 | MsG0880047542.01 | -0.817995 | 2.469715e-52 | 1.826223e-49 |
| MsG0480021331.01 | MsG0880047542.01 | -0.810287 | 1.242702e-50 | 7.460663e-48 |
| MsG0480021915.01 | MsG0880047542.01 | -0.810709 | 1.007292e-50 | 6.116149e-48 |
| MsG0480022309.01 | MsG0880047542.01 | 0.809922 | 1.488881e-50 | 8.854540e-48 |
| MsG0480022833.01 | MsG0880047542.01 | 0.814505 | 1.488754e-51 | 1.000821e-48 |
| MsG0480023006.01 | MsG0880047542.01 | -0.833814 | 4.296032e-56 | 5.003771e-53 |
| MsG0480023102.01 | MsG0880047542.01 | 0.816331 | 5.844438e-52 | 4.129323e-49 |
| MsG0480023152.01 | MsG0880047542.01 | -0.805478 | 1.309442e-49 | 6.934699e-47 |
| MsG0480023371.01 | MsG0880047542.01 | -0.806698 | 7.249526e-50 | 3.961039e-47 |
| MsG0580024086.01 | MsG0880047542.01 | 0.827934 | 1.188819e-54 | 1.164402e-51 |
| MsG0580024202.01 | MsG0880047542.01 | 0.835120 | 2.018804e-56 | 2.445072e-53 |
| MsG0580024207.01 | MsG0880047542.01 | 0.839759 | 1.307840e-57 | 1.823817e-54 |
| MsG0580024217.01 | MsG0880047542.01 | 0.858834 | 6.273293e-63 | 1.622772e-59 |
| MsG0580024218.01 | MsG0880047542.01 | 0.800456 | 1.429064e-48 | 6.657052e-46 |
| MsG0580024219.01 | MsG0880047542.01 | 0.840609 | 7.842992e-58 | 1.123074e-54 |
| MsG0580024220.01 | MsG0880047542.01 | 0.803142 | 4.013923e-49 | 2.001787e-46 |
| MsG0580024309.01 | MsG0880047542.01 | -0.808938 | 2.421786e-50 | 1.402957e-47 |
| MsG0580024408.01 | MsG0880047542.01 | 0.813511 | 2.467022e-51 | 1.614287e-48 |
| MsG0580024688.01 | MsG0880047542.01 | -0.802077 | 6.656828e-49 | 3.230976e-46 |
| MsG0580024986.01 | MsG0880047542.01 | 0.836326 | 9.993254e-57 | 1.255306e-53 |
| MsG0580024990.01 | MsG0880047542.01 | 0.841543 | 4.459612e-58 | 6.574148e-55 |
| MsG0580025965.01 | MsG0880047542.01 | 0.841666 | 4.138763e-58 | 6.124194e-55 |
| MsG0380015080.01 | MsG0880047542.01 | 0.851219 | 1.023417e-60 | 2.056866e-57 |
| MsG0380015110.01 | MsG0880047542.01 | 0.872214 | 3.777782e-67 | 1.567635e-63 |
| MsG0380015130.01 | MsG0880047542.01 | 0.804504 | 2.092482e-49 | 1.080683e-46 |
| MsG0380015201.01 | MsG0880047542.01 | -0.810160 | 1.323522e-50 | 7.919834e-48 |
| MsG0380015348.01 | MsG0880047542.01 | -0.801369 | 9.303305e-49 | 4.435289e-46 |
| MsG0380016086.01 | MsG0880047542.01 | 0.813865 | 2.061371e-51 | 1.361839e-48 |
| MsG0380016261.01 | MsG0880047542.01 | 0.802441 | 5.602258e-49 | 2.744487e-46 |
| MsG0380016492.01 | MsG0880047542.01 | -0.813497 | 2.484196e-51 | 1.624962e-48 |
| MsG0380016881.01 | MsG0880047542.01 | -0.820479 | 6.712281e-53 | 5.317013e-50 |
| MsG0380016889.01 | MsG0880047542.01 | -0.803956 | 2.720964e-49 | 1.385740e-46 |
| MsG0380017405.01 | MsG0880047542.01 | -0.814037 | 1.889551e-51 | 1.254153e-48 |
| MsG0380018070.01 | MsG0880047542.01 | 0.821074 | 4.898725e-53 | 3.945596e-50 |
| MsG0480018088.01 | MsG0880047542.01 | -0.821853 | 3.237539e-53 | 2.665091e-50 |
| MsG0480018439.01 | MsG0880047542.01 | 0.813776 | 2.156592e-51 | 1.421272e-48 |
| MsG0480018440.01 | MsG0880047542.01 | 0.824376 | 8.345530e-54 | 7.378894e-51 |
| MsG0580026492.01 | MsG0880047542.01 | 0.856644 | 2.798533e-62 | 6.724466e-59 |
| MsG0580027099.01 | MsG0880047542.01 | -0.802772 | 4.787506e-49 | 2.365307e-46 |
| MsG0580027638.01 | MsG0880047542.01 | 0.815412 | 9.369485e-52 | 6.455067e-49 |
| MsG0580028490.01 | MsG0880047542.01 | 0.809556 | 1.784713e-50 | 1.051168e-47 |
| MsG0580028899.01 | MsG0880047542.01 | 0.827660 | 1.383691e-54 | 1.344419e-51 |
| MsG0580028982.01 | MsG0880047542.01 | -0.809840 | 1.550567e-50 | 9.201677e-48 |
| MsG0580029706.01 | MsG0880047542.01 | -0.829656 | 4.555073e-55 | 4.692057e-52 |
| MsG0580029820.01 | MsG0880047542.01 | -0.841537 | 4.475707e-58 | 6.596773e-55 |
| MsG0580030133.01 | MsG0880047542.01 | 0.820009 | 8.601019e-53 | 6.725336e-50 |
| MsG0580030135.01 | MsG0880047542.01 | 0.857704 | 1.361752e-62 | 3.391148e-59 |
| MsG0580030145.01 | MsG0880047542.01 | 0.829036 | 6.442447e-55 | 6.515686e-52 |
| MsG0580030197.01 | MsG0880047542.01 | -0.803496 | 3.390222e-49 | 1.706265e-46 |
| MsG0680030399.01 | MsG0880047542.01 | -0.814117 | 1.813793e-51 | 1.206482e-48 |
| MsG0680030441.01 | MsG0880047542.01 | -0.800985 | 1.114363e-48 | 5.261754e-46 |
| MsG0680030644.01 | MsG0880047542.01 | -0.822856 | 1.893509e-53 | 1.603845e-50 |
| MsG0280006534.01 | MsG0880047542.01 | -0.815977 | 7.012416e-52 | 4.906535e-49 |
| MsG0280006964.01 | MsG0880047542.01 | -0.801895 | 7.256045e-49 | 3.505672e-46 |
| MsG0280007216.01 | MsG0880047542.01 | 0.816839 | 4.497115e-52 | 3.221780e-49 |
| MsG0280007716.01 | MsG0880047542.01 | 0.815855 | 7.464000e-52 | 5.204992e-49 |
| MsG0280007906.01 | MsG0880047542.01 | 0.816853 | 4.464522e-52 | 3.199626e-49 |
| MsG0280007908.01 | MsG0880047542.01 | 0.821897 | 3.162919e-53 | 2.606859e-50 |
| MsG0280007911.01 | MsG0880047542.01 | 0.833539 | 5.032144e-56 | 5.812850e-53 |
| MsG0280008659.01 | MsG0880047542.01 | 0.811554 | 6.606189e-51 | 4.101845e-48 |
| MsG0280009742.01 | MsG0880047542.01 | -0.804611 | 1.988313e-49 | 1.029749e-46 |
| MsG0280010019.01 | MsG0880047542.01 | 0.812904 | 3.352990e-51 | 2.158201e-48 |
| MsG0280010410.01 | MsG0880047542.01 | 0.800192 | 1.617204e-48 | 7.483149e-46 |
| MsG0280010461.01 | MsG0880047542.01 | -0.843979 | 1.003971e-58 | 1.597747e-55 |
| MsG0780035993.01 | MsG0880047542.01 | 0.813322 | 2.714460e-51 | 1.767083e-48 |
| MsG0780036472.01 | MsG0880047542.01 | 0.800552 | 1.365978e-48 | 6.378790e-46 |
| MsG0780036661.01 | MsG0880047542.01 | 0.801733 | 7.833512e-49 | 3.768884e-46 |
| MsG0780036747.01 | MsG0880047542.01 | -0.842051 | 3.274147e-58 | 4.903964e-55 |
| MsG0780036925.01 | MsG0880047542.01 | -0.851434 | 8.897854e-61 | 1.800830e-57 |
| MsG0780036960.01 | MsG0880047542.01 | 0.803007 | 4.280397e-49 | 2.127239e-46 |
| MsG0780038106.01 | MsG0880047542.01 | -0.804105 | 2.533920e-49 | 1.295375e-46 |
| MsG0780038108.01 | MsG0880047542.01 | -0.822173 | 2.728813e-53 | 2.266687e-50 |
| MsG0780038860.01 | MsG0880047542.01 | 0.822146 | 2.768704e-53 | 2.298148e-50 |
| MsG0780038963.01 | MsG0880047542.01 | 0.856966 | 2.250166e-62 | 5.465624e-59 |
| MsG0780039576.01 | MsG0880047542.01 | 0.817328 | 3.490702e-52 | 2.534443e-49 |
| MsG0780039836.01 | MsG0880047542.01 | -0.807035 | 6.152418e-50 | 3.391111e-47 |
| MsG0780039912.01 | MsG0880047542.01 | 0.807160 | 5.790322e-50 | 3.201820e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047542.01.T01 | MTR_4g129510 | 97.389 | 383 | 9 | 1 | 29 | 411 | 1 | 382 | 0.0 | 771 |
| MsG0880047542.01.T01 | MTR_4g129510 | 97.231 | 325 | 8 | 1 | 87 | 411 | 28 | 351 | 0.0 | 649 |
| MsG0880047542.01.T01 | MTR_4g129510 | 96.358 | 302 | 10 | 1 | 29 | 330 | 1 | 301 | 0.0 | 594 |
| MsG0880047542.01.T01 | MTR_3g110182 | 30.491 | 387 | 226 | 14 | 39 | 397 | 34 | 405 | 1.32e-16 | 81.6 |
| MsG0880047542.01.T01 | MTR_3g110182 | 31.962 | 316 | 183 | 10 | 39 | 334 | 32 | 335 | 2.18e-15 | 77.4 |
| MsG0880047542.01.T01 | MTR_7g095500 | 31.010 | 287 | 149 | 10 | 146 | 389 | 175 | 455 | 7.22e-13 | 70.5 |
| MsG0880047542.01.T01 | MTR_4g039910 | 33.186 | 226 | 129 | 7 | 142 | 352 | 97 | 315 | 5.78e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047542.01.T01 | AT5G57770 | 57.606 | 401 | 145 | 12 | 30 | 411 | 9 | 403 | 1.54e-131 | 384 |
| MsG0880047542.01.T01 | AT5G57770 | 57.317 | 328 | 121 | 10 | 30 | 344 | 9 | 330 | 9.86e-102 | 306 |
| MsG0880047542.01.T01 | AT3G22810 | 31.420 | 331 | 176 | 10 | 115 | 400 | 1 | 325 | 8.50e-23 | 99.0 |
| MsG0880047542.01.T01 | AT3G22810 | 28.912 | 377 | 219 | 11 | 68 | 400 | 92 | 463 | 1.54e-22 | 99.8 |
| MsG0880047542.01.T01 | AT4G14740 | 32.770 | 296 | 154 | 8 | 143 | 397 | 174 | 465 | 2.54e-21 | 96.3 |
| MsG0880047542.01.T01 | AT4G14740 | 32.770 | 296 | 154 | 8 | 143 | 397 | 174 | 465 | 2.54e-21 | 96.3 |
| MsG0880047542.01.T01 | AT3G22810 | 32.459 | 305 | 166 | 7 | 68 | 336 | 92 | 392 | 3.73e-21 | 95.1 |
| MsG0880047542.01.T01 | AT4G14740 | 32.770 | 296 | 154 | 8 | 143 | 397 | 35 | 326 | 5.96e-21 | 93.6 |
| MsG0880047542.01.T01 | AT4G14740 | 36.123 | 227 | 109 | 4 | 143 | 336 | 174 | 397 | 4.59e-18 | 85.9 |
| MsG0880047542.01.T01 | AT5G47440 | 30.249 | 281 | 166 | 10 | 143 | 399 | 111 | 385 | 6.64e-15 | 76.3 |
| MsG0880047542.01.T01 | AT5G43870 | 29.570 | 372 | 204 | 15 | 68 | 401 | 96 | 447 | 2.06e-14 | 75.1 |
| MsG0880047542.01.T01 | AT4G17350 | 27.915 | 283 | 177 | 9 | 143 | 403 | 112 | 389 | 9.29e-14 | 72.8 |
| MsG0880047542.01.T01 | AT5G43870 | 31.475 | 305 | 162 | 11 | 68 | 341 | 96 | 384 | 8.83e-13 | 69.7 |
Find 82 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATAAAGAAATGGTTTA+AGG | 0.192823 | 8:-87850629 | MsG0880047542.01.T01:CDS |
| CTACTATTGTAATTTAATTC+AGG | 0.205045 | 8:+87850815 | None:intergenic |
| TCATATAATTTCAGTAAAAT+TGG | 0.235781 | 8:+87848850 | None:intergenic |
| GAGGATCTTAGAAGTGTTAT+TGG | 0.247047 | 8:-87850391 | MsG0880047542.01.T01:CDS |
| GAATGGATGATGCAGATTTC+AGG | 0.263694 | 8:-87851208 | MsG0880047542.01.T01:CDS |
| TGGCTAACTGTAGCATTAAA+AGG | 0.287338 | 8:-87849956 | MsG0880047542.01.T01:intron |
| TAAATTACAATAGTAGTTTA+CGG | 0.296909 | 8:-87850808 | MsG0880047542.01.T01:CDS |
| TACATGTTATCTAATTGTTT+TGG | 0.319327 | 8:-87848991 | MsG0880047542.01.T01:CDS |
| TGGATTTCCTTTCACTTGCT+TGG | 0.326888 | 8:-87851474 | MsG0880047542.01.T01:CDS |
| CTAGGCTCGAATTGTTTGAT+AGG | 0.330134 | 8:+87851385 | None:intergenic |
| CAGCTGCAGCAGTGAGAGTT+AGG | 0.331764 | 8:+87850335 | None:intergenic |
| TATTGAAGACAACTACGATT+TGG | 0.335481 | 8:-87849867 | MsG0880047542.01.T01:CDS |
| AATAGCCTCTGCTGCTGCTT+TGG | 0.340557 | 8:-87850461 | MsG0880047542.01.T01:CDS |
| AGGATTATAGACACTGTTCT+TGG | 0.349804 | 8:+87849436 | None:intergenic |
| TGGAAAGAAATGAGTTGAAC+AGG | 0.362520 | 8:+87851583 | None:intergenic |
| ATTGAAGTCTAATGATCTTA+AGG | 0.384539 | 8:-87851174 | MsG0880047542.01.T01:intron |
| ACTAGCACTTGTGCCATTCA+TGG | 0.391346 | 8:+87850363 | None:intergenic |
| TTGGTGTAACTTTGCTGTAC+AGG | 0.391695 | 8:-87851455 | MsG0880047542.01.T01:CDS |
| CATGCAGCAATGTCCATTGC+AGG | 0.399965 | 8:-87850556 | MsG0880047542.01.T01:CDS |
| TACTATTGTAATTTAATTCA+GGG | 0.403562 | 8:+87850816 | None:intergenic |
| AATCTTGAGCATATGATTGA+TGG | 0.426592 | 8:+87848899 | None:intergenic |
| TTAAGATCATTAGACTTCAA+TGG | 0.430741 | 8:+87851176 | None:intergenic |
| AGTGATCCATGTTGTGGCTC+AGG | 0.434842 | 8:+87851424 | None:intergenic |
| GGAAGAGCCATGGGGCTACT+AGG | 0.434940 | 8:+87851367 | None:intergenic |
| ATGCATGCAGAGCTGTATAA+AGG | 0.440766 | 8:-87849032 | MsG0880047542.01.T01:CDS |
| AGGAAGATTGATTCTTGCAC+AGG | 0.450333 | 8:-87849828 | MsG0880047542.01.T01:CDS |
| TAGCCCCATGGCTCTTCCTT+CGG | 0.453577 | 8:-87851362 | MsG0880047542.01.T01:intron |
| AAATCGTAGTTGTCTTCAAT+AGG | 0.457610 | 8:+87849869 | None:intergenic |
| AAAGTATGTCAATAAAGAAA+TGG | 0.463515 | 8:-87850636 | MsG0880047542.01.T01:CDS |
| GGATCAAGGAACAGATTGAA+TGG | 0.466276 | 8:-87849908 | MsG0880047542.01.T01:CDS |
| TGCAAAAGTAGCTGAATCAA+TGG | 0.476188 | 8:-87850425 | MsG0880047542.01.T01:CDS |
| TTGTCTTCAATAGGCAAGAT+GGG | 0.487903 | 8:+87849878 | None:intergenic |
| AGTGGTAATATCTGCTTCCA+TGG | 0.499258 | 8:+87850661 | None:intergenic |
| GATCAAGGAACAGATTGAAT+GGG | 0.501658 | 8:-87849907 | MsG0880047542.01.T01:CDS |
| ATCTTCGTCGTTACAAGACA+TGG | 0.507918 | 8:-87848929 | MsG0880047542.01.T01:CDS |
| GTTGTCTTCAATAGGCAAGA+TGG | 0.510367 | 8:+87849877 | None:intergenic |
| CTCACCGAAGGAAGAGCCAT+GGG | 0.512745 | 8:+87851358 | None:intergenic |
| TAGGCTCGAATTGTTTGATA+GGG | 0.514312 | 8:+87851386 | None:intergenic |
| GCCACACTTAAAGTAAGATC+AGG | 0.526345 | 8:-87849929 | MsG0880047542.01.T01:CDS |
| TGCTGCTGCAACCCCTGCAA+TGG | 0.526734 | 8:+87850543 | None:intergenic |
| ATCATATCATGTAGATGCCA+TGG | 0.527791 | 8:-87850678 | MsG0880047542.01.T01:intron |
| AGCTACCAAAGCAGCAGCAG+AGG | 0.532052 | 8:+87850456 | None:intergenic |
| TAACCTTAGCTTCACTGTTG+AGG | 0.534080 | 8:+87849416 | None:intergenic |
| GACTCAGGATGTGCATCTGA+AGG | 0.534790 | 8:+87851499 | None:intergenic |
| TTAAAGTAAGATCAGGATCA+AGG | 0.540160 | 8:-87849922 | MsG0880047542.01.T01:CDS |
| AATCCTCAACAGTGAAGCTA+AGG | 0.541104 | 8:-87849419 | MsG0880047542.01.T01:intron |
| AGATGCACATCCTGAGTCCA+TGG | 0.541397 | 8:-87851494 | MsG0880047542.01.T01:CDS |
| GTTATTGGCTCAGCCATGAA+TGG | 0.544355 | 8:-87850376 | MsG0880047542.01.T01:CDS |
| TAGATAACATGTATCATCCT+CGG | 0.552626 | 8:+87849001 | None:intergenic |
| TCCTGATCTTACTTTAAGTG+TGG | 0.557535 | 8:+87849928 | None:intergenic |
| GAGCATATGATTGATGGTTG+TGG | 0.559092 | 8:+87848905 | None:intergenic |
| GCAAAAGTAGCTGAATCAAT+GGG | 0.559749 | 8:-87850424 | MsG0880047542.01.T01:CDS |
| GTGATCCATGTTGTGGCTCA+GGG | 0.562607 | 8:+87851425 | None:intergenic |
| AGTTACACCAAGCAAGTGAA+AGG | 0.575345 | 8:+87851467 | None:intergenic |
| AGCAAGTGAAAGGAAATCCA+TGG | 0.584542 | 8:+87851477 | None:intergenic |
| GAAAGGAAATCCATGGACTC+AGG | 0.585901 | 8:+87851484 | None:intergenic |
| ACTCAGGATGTGCATCTGAA+GGG | 0.587610 | 8:+87851500 | None:intergenic |
| ATCAATGGGAGCTAAGAAAG+AGG | 0.593937 | 8:-87850410 | MsG0880047542.01.T01:CDS |
| CTGAACCCTGAGCCACAACA+TGG | 0.595899 | 8:-87851430 | MsG0880047542.01.T01:CDS |
| ATGCAGCAATGTCCATTGCA+GGG | 0.597636 | 8:-87850555 | MsG0880047542.01.T01:CDS |
| CTCAGGATGTGCATCTGAAG+GGG | 0.602490 | 8:+87851501 | None:intergenic |
| TGAAGGGGATAGATTAAACT+CGG | 0.616318 | 8:+87851516 | None:intergenic |
| ACATAGATTGCAAAGAGCAG+AGG | 0.616604 | 8:-87850581 | MsG0880047542.01.T01:CDS |
| AGAACAAGTGATCCATGTTG+TGG | 0.619287 | 8:+87851418 | None:intergenic |
| ATCAAGGAACAGATTGAATG+GGG | 0.619443 | 8:-87849906 | MsG0880047542.01.T01:CDS |
| GGGATATCATCACATTAACA+TGG | 0.623318 | 8:-87851542 | MsG0880047542.01.T01:CDS |
| TGTCTTCAATAGGCAAGATG+GGG | 0.632757 | 8:+87849879 | None:intergenic |
| CACTTTCAAGCTAGACATGG+TGG | 0.633111 | 8:-87848955 | MsG0880047542.01.T01:CDS |
| ACTCACCGAAGGAAGAGCCA+TGG | 0.639654 | 8:+87851357 | None:intergenic |
| GGAAGATTGATTCTTGCACA+GGG | 0.639974 | 8:-87849827 | MsG0880047542.01.T01:CDS |
| TACAGGTTATACTCATGATG+AGG | 0.654471 | 8:-87849193 | MsG0880047542.01.T01:intron |
| ATTCGAGCCTAGTAGCCCCA+TGG | 0.664825 | 8:-87851374 | MsG0880047542.01.T01:CDS |
| TGCAGCAATGTCCATTGCAG+GGG | 0.667723 | 8:-87850554 | MsG0880047542.01.T01:CDS |
| AGGCACTTTCAAGCTAGACA+TGG | 0.677280 | 8:-87848958 | MsG0880047542.01.T01:CDS |
| GTATAAAGGTTCAGAAACCG+AGG | 0.678370 | 8:-87849018 | MsG0880047542.01.T01:CDS |
| AGATCATTAGACTTCAATGG+AGG | 0.678880 | 8:+87851179 | None:intergenic |
| ACAGGGTGCTGAGTTATATG+TGG | 0.679997 | 8:-87849810 | MsG0880047542.01.T01:CDS |
| TTATATGTGGAATCACCAGA+AGG | 0.687221 | 8:-87849797 | MsG0880047542.01.T01:intron |
| GTCTTCAATAGGCAAGATGG+GGG | 0.690345 | 8:+87849880 | None:intergenic |
| TCTTCGTCGTTACAAGACAT+GGG | 0.693504 | 8:-87848928 | MsG0880047542.01.T01:CDS |
| TCAAGGAACAGATTGAATGG+GGG | 0.721493 | 8:-87849905 | MsG0880047542.01.T01:CDS |
| TCACCGAAGGAAGAGCCATG+GGG | 0.748102 | 8:+87851359 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAATAATTAAAAGAAAA+GGG | + | Chr8:87851351-87851370 | None:intergenic | 10.0% |
| !! | TCATAAATAATTAAAAGAAA+AGG | + | Chr8:87851352-87851371 | None:intergenic | 10.0% |
| !!! | ATAAAAAGTTTATTTTCTAT+TGG | + | Chr8:87850385-87850404 | None:intergenic | 10.0% |
| !! | TAAATTACAATAGTAGTTTA+CGG | - | Chr8:87849659-87849678 | MsG0880047542.01.T01:intron | 15.0% |
| !! | TACTATTGTAATTTAATTCA+GGG | + | Chr8:87849654-87849673 | None:intergenic | 15.0% |
| !! | TAGTAAAACATATAATACAT+AGG | + | Chr8:87850969-87850988 | None:intergenic | 15.0% |
| !! | TTAAGTTAAGCTTAATTTAA+CGG | + | Chr8:87851174-87851193 | None:intergenic | 15.0% |
| !!! | TTAATTCTTTATGGTATTTT+TGG | + | Chr8:87851146-87851165 | None:intergenic | 15.0% |
| !! | AAAGTATGTCAATAAAGAAA+TGG | - | Chr8:87849831-87849850 | MsG0880047542.01.T01:CDS | 20.0% |
| !! | AAGTTAAGAATTATGACATT+TGG | + | Chr8:87850727-87850746 | None:intergenic | 20.0% |
| !! | CTACTATTGTAATTTAATTC+AGG | + | Chr8:87849655-87849674 | None:intergenic | 20.0% |
| !! | CTATATATGGTTATACTAAT+TGG | + | Chr8:87850794-87850813 | None:intergenic | 20.0% |
| !! | TAACTTAAAAGTCATACAAA+TGG | + | Chr8:87850883-87850902 | None:intergenic | 20.0% |
| !! | TTTAGTGTAATTATATGTGT+CGG | - | Chr8:87850258-87850277 | MsG0880047542.01.T01:intron | 20.0% |
| !!! | AAAAGTTTATTTTCTATTGG+TGG | + | Chr8:87850382-87850401 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTTTCTGACCTT+TGG | - | Chr8:87851230-87851249 | MsG0880047542.01.T01:intron | 20.0% |
| !!! | CAAAATAATCTTGTGTTTTT+GGG | - | Chr8:87848905-87848924 | MsG0880047542.01.T01:CDS | 20.0% |
| !!! | TACATGTTATCTAATTGTTT+TGG | - | Chr8:87851476-87851495 | MsG0880047542.01.T01:CDS | 20.0% |
| !!! | TTTAGAGTATAGTTTAAACT+TGG | + | Chr8:87849136-87849155 | None:intergenic | 20.0% |
| ! | AATATTGATCAAAAGTGAGT+AGG | + | Chr8:87849206-87849225 | None:intergenic | 25.0% |
| ! | ACTTCAATTATGTCTTAACA+GGG | - | Chr8:87850999-87851018 | MsG0880047542.01.T01:intron | 25.0% |
| ! | ATAGTAGTTTACGGAAAAAA+TGG | - | Chr8:87849668-87849687 | MsG0880047542.01.T01:intron | 25.0% |
| ! | ATATGGTTATACTAATTGGA+TGG | + | Chr8:87850790-87850809 | None:intergenic | 25.0% |
| ! | ATCTACATGATATGATATGA+TGG | + | Chr8:87849785-87849804 | None:intergenic | 25.0% |
| ! | ATTGAAGTCTAATGATCTTA+AGG | - | Chr8:87849293-87849312 | MsG0880047542.01.T01:intron | 25.0% |
| ! | CTGTTACTGAAAAAAATTGT+TGG | - | Chr8:87850491-87850510 | MsG0880047542.01.T01:CDS | 25.0% |
| ! | CTTAATAATTCTCCTTCTTT+AGG | + | Chr8:87850817-87850836 | None:intergenic | 25.0% |
| ! | GTCAATAAAGAAATGGTTTA+AGG | - | Chr8:87849838-87849857 | MsG0880047542.01.T01:CDS | 25.0% |
| ! | TAGTAGTTTACGGAAAAAAT+GGG | - | Chr8:87849669-87849688 | MsG0880047542.01.T01:intron | 25.0% |
| ! | TCCATAATAGATGAAATGAA+TGG | - | Chr8:87850437-87850456 | MsG0880047542.01.T01:CDS | 25.0% |
| ! | TCCATTCATTTCATCTATTA+TGG | + | Chr8:87850441-87850460 | None:intergenic | 25.0% |
| ! | TTAAGATCATTAGACTTCAA+TGG | + | Chr8:87849294-87849313 | None:intergenic | 25.0% |
| !! | CCAAAAACACAAGATTATTT+TGG | + | Chr8:87848907-87848926 | None:intergenic | 25.0% |
| !! | CCAAAATAATCTTGTGTTTT+TGG | - | Chr8:87848904-87848923 | MsG0880047542.01.T01:CDS | 25.0% |
| !! | GAAAGTCAAACTTTTGTAAT+AGG | - | Chr8:87850911-87850930 | MsG0880047542.01.T01:intron | 25.0% |
| !! | GTAGTGGTTGTTATTATTAT+AGG | - | Chr8:87851399-87851418 | MsG0880047542.01.T01:CDS | 25.0% |
| !! | TTAGAGAACTATTTTATGCA+CGG | - | Chr8:87850856-87850875 | MsG0880047542.01.T01:intron | 25.0% |
| !! | TTTATTGACATACTTTTCAG+TGG | + | Chr8:87849827-87849846 | None:intergenic | 25.0% |
| !!! | TTGGATTTTGACTTTGAAAA+AGG | - | Chr8:87850619-87850638 | MsG0880047542.01.T01:CDS | 25.0% |
| AAATCGTAGTTGTCTTCAAT+AGG | + | Chr8:87850601-87850620 | None:intergenic | 30.0% | |
| AACAGATTGTACATAGAGTA+CGG | + | Chr8:87850476-87850495 | None:intergenic | 30.0% | |
| AACCATATATAGCCTAAAGA+AGG | - | Chr8:87850802-87850821 | MsG0880047542.01.T01:CDS | 30.0% | |
| AATCTTGAGCATATGATTGA+TGG | + | Chr8:87851571-87851590 | None:intergenic | 30.0% | |
| ACGGTGTCTTTAATTCTTTA+TGG | + | Chr8:87851155-87851174 | None:intergenic | 30.0% | |
| ATGATCTTTACTCAAACTAC+AGG | - | Chr8:87851257-87851276 | MsG0880047542.01.T01:intron | 30.0% | |
| ATGATTACATCTTGCTTTAC+TGG | - | Chr8:87851198-87851217 | MsG0880047542.01.T01:CDS | 30.0% | |
| GACATACTAAACACAAAACA+CGG | - | Chr8:87849377-87849396 | MsG0880047542.01.T01:intron | 30.0% | |
| GACTTCAATTATGTCTTAAC+AGG | - | Chr8:87850998-87851017 | MsG0880047542.01.T01:intron | 30.0% | |
| GATAATACCCAAAACTATGA+AGG | + | Chr8:87850314-87850333 | None:intergenic | 30.0% | |
| TAATCTGCTAAAAAGCAAGA+AGG | - | Chr8:87851302-87851321 | MsG0880047542.01.T01:intron | 30.0% | |
| TAATTACACTAAATCGTGTC+CGG | + | Chr8:87850251-87850270 | None:intergenic | 30.0% | |
| TAGAATGCACGAATAACTTA+TGG | - | Chr8:87851377-87851396 | MsG0880047542.01.T01:CDS | 30.0% | |
| TAGATAACATGTATCATCCT+CGG | + | Chr8:87851469-87851488 | None:intergenic | 30.0% | |
| TATTGAAGACAACTACGATT+TGG | - | Chr8:87850600-87850619 | MsG0880047542.01.T01:CDS | 30.0% | |
| TGACGCATGAAAATAATTTG+TGG | - | Chr8:87849416-87849435 | MsG0880047542.01.T01:intron | 30.0% | |
| TGTCATAGAACTGAATTAGA+TGG | + | Chr8:87849339-87849358 | None:intergenic | 30.0% | |
| TTAAAGTAAGATCAGGATCA+AGG | - | Chr8:87850545-87850564 | MsG0880047542.01.T01:CDS | 30.0% | |
| ! | ATATTTTTCACTCAGTTTCC+TGG | - | Chr8:87849698-87849717 | MsG0880047542.01.T01:intron | 30.0% |
| !! | AGTTTATTTTCTATTGGTGG+AGG | + | Chr8:87850379-87850398 | None:intergenic | 30.0% |
| !! | GTTTATTTTCTATTGGTGGA+GGG | + | Chr8:87850378-87850397 | None:intergenic | 30.0% |
| !! | TATGAAAAAGAGTGCTAGAA+TGG | - | Chr8:87849242-87849261 | MsG0880047542.01.T01:intron | 30.0% |
| !!! | ATGTTCTGTTTTTTCAGTCA+TGG | - | Chr8:87849605-87849624 | MsG0880047542.01.T01:intron | 30.0% |
| !!! | ATTGTTTTGGCAACAAGAAA+AGG | - | Chr8:87851489-87851508 | MsG0880047542.01.T01:CDS | 30.0% |
| !!! | TGTTTTTTCAGTCATGGATA+TGG | - | Chr8:87849611-87849630 | MsG0880047542.01.T01:intron | 30.0% |
| AGATCATTAGACTTCAATGG+AGG | + | Chr8:87849291-87849310 | None:intergenic | 35.0% | |
| AGGATTATAGACACTGTTCT+TGG | + | Chr8:87851034-87851053 | None:intergenic | 35.0% | |
| AGTAAAGATCATTGCTCCAA+AGG | + | Chr8:87851249-87851268 | None:intergenic | 35.0% | |
| AGTGTAATTATATGTGTCGG+CGG | - | Chr8:87850261-87850280 | MsG0880047542.01.T01:intron | 35.0% | |
| ATACCCAAAACTATGAAGGA+CGG | + | Chr8:87850310-87850329 | None:intergenic | 35.0% | |
| ATCAAGGAACAGATTGAATG+GGG | - | Chr8:87850561-87850580 | MsG0880047542.01.T01:CDS | 35.0% | |
| ATCATATCATGTAGATGCCA+TGG | - | Chr8:87849789-87849808 | MsG0880047542.01.T01:intron | 35.0% | |
| CTCCTTCTTTAGGCTATATA+TGG | + | Chr8:87850807-87850826 | None:intergenic | 35.0% | |
| GATCAAGGAACAGATTGAAT+GGG | - | Chr8:87850560-87850579 | MsG0880047542.01.T01:CDS | 35.0% | |
| GCAAAAGTAGCTGAATCAAT+GGG | - | Chr8:87850043-87850062 | MsG0880047542.01.T01:intron | 35.0% | |
| GGGATATCATCACATTAACA+TGG | - | Chr8:87848925-87848944 | MsG0880047542.01.T01:CDS | 35.0% | |
| TACAGGTTATACTCATGATG+AGG | - | Chr8:87851274-87851293 | MsG0880047542.01.T01:intron | 35.0% | |
| TAGGCTCGAATTGTTTGATA+GGG | + | Chr8:87849084-87849103 | None:intergenic | 35.0% | |
| TCCTGATCTTACTTTAAGTG+TGG | + | Chr8:87850542-87850561 | None:intergenic | 35.0% | |
| TGAAGCTAAGGTTAGGATTA+TGG | - | Chr8:87851060-87851079 | MsG0880047542.01.T01:intron | 35.0% | |
| TGAAGGGGATAGATTAAACT+CGG | + | Chr8:87848954-87848973 | None:intergenic | 35.0% | |
| TGCAAAAGTAGCTGAATCAA+TGG | - | Chr8:87850042-87850061 | MsG0880047542.01.T01:intron | 35.0% | |
| TGGCTAACTGTAGCATTAAA+AGG | - | Chr8:87850511-87850530 | MsG0880047542.01.T01:CDS | 35.0% | |
| TTATATGTGGAATCACCAGA+AGG | - | Chr8:87850670-87850689 | MsG0880047542.01.T01:intron | 35.0% | |
| TTGATCAAAAGTGAGTAGGT+TGG | + | Chr8:87849202-87849221 | None:intergenic | 35.0% | |
| TTGTCTTCAATAGGCAAGAT+GGG | + | Chr8:87850592-87850611 | None:intergenic | 35.0% | |
| ! | AGAATTATGACATTTGGAGC+AGG | + | Chr8:87850721-87850740 | None:intergenic | 35.0% |
| ! | ATACTAATTGGATGGTAGTG+TGG | + | Chr8:87850782-87850801 | None:intergenic | 35.0% |
| ! | CGACTTTGATTTAGGTGAAT+AGG | - | Chr8:87851100-87851119 | MsG0880047542.01.T01:intron | 35.0% |
| ! | GAATTATGACATTTGGAGCA+GGG | + | Chr8:87850720-87850739 | None:intergenic | 35.0% |
| ! | TGGAAAGAAATGAGTTGAAC+AGG | + | Chr8:87848887-87848906 | None:intergenic | 35.0% |
| !! | ATTGCATTGAAAGTACCTTC+TGG | + | Chr8:87850688-87850707 | None:intergenic | 35.0% |
| !! | GAGGATCTTAGAAGTGTTAT+TGG | - | Chr8:87850076-87850095 | MsG0880047542.01.T01:intron | 35.0% |
| AATCCTCAACAGTGAAGCTA+AGG | - | Chr8:87851048-87851067 | MsG0880047542.01.T01:intron | 40.0% | |
| ACATAGATTGCAAAGAGCAG+AGG | - | Chr8:87849886-87849905 | MsG0880047542.01.T01:CDS | 40.0% | |
| AGAACAAGTGATCCATGTTG+TGG | + | Chr8:87849052-87849071 | None:intergenic | 40.0% | |
| AGCAAGTGAAAGGAAATCCA+TGG | + | Chr8:87848993-87849012 | None:intergenic | 40.0% | |
| AGTGGTAATATCTGCTTCCA+TGG | + | Chr8:87849809-87849828 | None:intergenic | 40.0% | |
| AGTTACACCAAGCAAGTGAA+AGG | + | Chr8:87849003-87849022 | None:intergenic | 40.0% | |
| ATCAATGGGAGCTAAGAAAG+AGG | - | Chr8:87850057-87850076 | MsG0880047542.01.T01:intron | 40.0% | |
| ATCTTCGTCGTTACAAGACA+TGG | - | Chr8:87851538-87851557 | MsG0880047542.01.T01:CDS | 40.0% | |
| ATGCATGCAGAGCTGTATAA+AGG | - | Chr8:87851435-87851454 | MsG0880047542.01.T01:CDS | 40.0% | |
| CTAGGCTCGAATTGTTTGAT+AGG | + | Chr8:87849085-87849104 | None:intergenic | 40.0% | |
| GAATGGATGATGCAGATTTC+AGG | - | Chr8:87849259-87849278 | MsG0880047542.01.T01:intron | 40.0% | |
| GCACGAATAACTTATGGTAG+TGG | - | Chr8:87851383-87851402 | MsG0880047542.01.T01:CDS | 40.0% | |
| GCCACACTTAAAGTAAGATC+AGG | - | Chr8:87850538-87850557 | MsG0880047542.01.T01:CDS | 40.0% | |
| GGATCAAGGAACAGATTGAA+TGG | - | Chr8:87850559-87850578 | MsG0880047542.01.T01:CDS | 40.0% | |
| GTATAAAGGTTCAGAAACCG+AGG | - | Chr8:87851449-87851468 | MsG0880047542.01.T01:CDS | 40.0% | |
| GTTGTCTTCAATAGGCAAGA+TGG | + | Chr8:87850593-87850612 | None:intergenic | 40.0% | |
| TAAACACAAAACACGGACAC+TGG | - | Chr8:87849384-87849403 | MsG0880047542.01.T01:intron | 40.0% | |
| TAACCTTAGCTTCACTGTTG+AGG | + | Chr8:87851054-87851073 | None:intergenic | 40.0% | |
| TCAACAGTGAAGCTAAGGTT+AGG | - | Chr8:87851053-87851072 | MsG0880047542.01.T01:intron | 40.0% | |
| TCAAGGAACAGATTGAATGG+GGG | - | Chr8:87850562-87850581 | MsG0880047542.01.T01:CDS | 40.0% | |
| TCTTCGTCGTTACAAGACAT+GGG | - | Chr8:87851539-87851558 | MsG0880047542.01.T01:CDS | 40.0% | |
| TGGATTTCCTTTCACTTGCT+TGG | - | Chr8:87848993-87849012 | MsG0880047542.01.T01:CDS | 40.0% | |
| TGTCTTCAATAGGCAAGATG+GGG | + | Chr8:87850591-87850610 | None:intergenic | 40.0% | |
| TTTAAACTTGGACTCACCGA+AGG | + | Chr8:87849124-87849143 | None:intergenic | 40.0% | |
| TTTGTGTGTCTGATAAGCGA+CGG | + | Chr8:87849502-87849521 | None:intergenic | 40.0% | |
| ! | AGGAAGATTGATTCTTGCAC+AGG | - | Chr8:87850639-87850658 | MsG0880047542.01.T01:CDS | 40.0% |
| ! | GAGCATATGATTGATGGTTG+TGG | + | Chr8:87851565-87851584 | None:intergenic | 40.0% |
| ! | GGAAGATTGATTCTTGCACA+GGG | - | Chr8:87850640-87850659 | MsG0880047542.01.T01:CDS | 40.0% |
| ! | GTGTAATTATATGTGTCGGC+GGG | - | Chr8:87850262-87850281 | MsG0880047542.01.T01:intron | 40.0% |
| ! | TGTCCGTCCTTCATAGTTTT+GGG | - | Chr8:87850304-87850323 | MsG0880047542.01.T01:intron | 40.0% |
| ! | TTGGTGTAACTTTGCTGTAC+AGG | - | Chr8:87849012-87849031 | MsG0880047542.01.T01:CDS | 40.0% |
| ! | TTTTTCACTCAGTTTCCTGG+TGG | - | Chr8:87849701-87849720 | MsG0880047542.01.T01:intron | 40.0% |
| !! | GTGTCTGTCGACTTTGATTT+AGG | - | Chr8:87851092-87851111 | MsG0880047542.01.T01:intron | 40.0% |
| ACTCAGGATGTGCATCTGAA+GGG | + | Chr8:87848970-87848989 | None:intergenic | 45.0% | |
| AGGCACTTTCAAGCTAGACA+TGG | - | Chr8:87851509-87851528 | MsG0880047542.01.T01:CDS | 45.0% | |
| ATGCAGCAATGTCCATTGCA+GGG | - | Chr8:87849912-87849931 | MsG0880047542.01.T01:CDS | 45.0% | |
| CACTTTCAAGCTAGACATGG+TGG | - | Chr8:87851512-87851531 | MsG0880047542.01.T01:CDS | 45.0% | |
| GAAAGGAAATCCATGGACTC+AGG | + | Chr8:87848986-87849005 | None:intergenic | 45.0% | |
| GGACTATGAAGCACGAATAC+GGG | - | Chr8:87850217-87850236 | MsG0880047542.01.T01:intron | 45.0% | |
| GGGACTATGAAGCACGAATA+CGG | - | Chr8:87850216-87850235 | MsG0880047542.01.T01:intron | 45.0% | |
| GTCTTCAATAGGCAAGATGG+GGG | + | Chr8:87850590-87850609 | None:intergenic | 45.0% | |
| TATGAAGGACGGACACTCAT+TGG | + | Chr8:87850299-87850318 | None:intergenic | 45.0% | |
| ! | ACTAGCACTTGTGCCATTCA+TGG | + | Chr8:87850107-87850126 | None:intergenic | 45.0% |
| ! | GTGTCCGTCCTTCATAGTTT+TGG | - | Chr8:87850303-87850322 | MsG0880047542.01.T01:intron | 45.0% |
| !! | ACAGGGTGCTGAGTTATATG+TGG | - | Chr8:87850657-87850676 | MsG0880047542.01.T01:CDS | 45.0% |
| !! | GTTATTGGCTCAGCCATGAA+TGG | - | Chr8:87850091-87850110 | MsG0880047542.01.T01:intron | 45.0% |
| !!! | TATTTTTTAAAATTCAATAT+TGG | - | Chr8:87850411-87850430 | MsG0880047542.01.T01:CDS | 5.0% |
| !!! | TTAATTAATACAATTATTTT+GGG | - | Chr8:87850196-87850215 | MsG0880047542.01.T01:intron | 5.0% |
| !!! | TTTAATTAATACAATTATTT+TGG | - | Chr8:87850195-87850214 | MsG0880047542.01.T01:intron | 5.0% |
| AGATGCACATCCTGAGTCCA+TGG | - | Chr8:87848973-87848992 | MsG0880047542.01.T01:CDS | 50.0% | |
| AGTGATCCATGTTGTGGCTC+AGG | + | Chr8:87849046-87849065 | None:intergenic | 50.0% | |
| CATGCAGCAATGTCCATTGC+AGG | - | Chr8:87849911-87849930 | MsG0880047542.01.T01:CDS | 50.0% | |
| CTCAGGATGTGCATCTGAAG+GGG | + | Chr8:87848969-87848988 | None:intergenic | 50.0% | |
| GACTCAGGATGTGCATCTGA+AGG | + | Chr8:87848971-87848990 | None:intergenic | 50.0% | |
| GTGATCCATGTTGTGGCTCA+GGG | + | Chr8:87849045-87849064 | None:intergenic | 50.0% | |
| TGCAGCAATGTCCATTGCAG+GGG | - | Chr8:87849913-87849932 | MsG0880047542.01.T01:CDS | 50.0% | |
| TGCATGTAACTCTCACCACC+AGG | + | Chr8:87849719-87849738 | None:intergenic | 50.0% | |
| ! | AATAGCCTCTGCTGCTGCTT+TGG | - | Chr8:87850006-87850025 | MsG0880047542.01.T01:intron | 50.0% |
| ACGAATACGGGCACAGACAC+CGG | - | Chr8:87850229-87850248 | MsG0880047542.01.T01:intron | 55.0% | |
| ACTCACCGAAGGAAGAGCCA+TGG | + | Chr8:87849113-87849132 | None:intergenic | 55.0% | |
| AGCTACCAAAGCAGCAGCAG+AGG | + | Chr8:87850014-87850033 | None:intergenic | 55.0% | |
| ATTCGAGCCTAGTAGCCCCA+TGG | - | Chr8:87849093-87849112 | MsG0880047542.01.T01:intron | 55.0% | |
| CAGCTGCAGCAGTGAGAGTT+AGG | + | Chr8:87850135-87850154 | None:intergenic | 55.0% | |
| CTCACCGAAGGAAGAGCCAT+GGG | + | Chr8:87849112-87849131 | None:intergenic | 55.0% | |
| CTGAACCCTGAGCCACAACA+TGG | - | Chr8:87849037-87849056 | MsG0880047542.01.T01:CDS | 55.0% | |
| TAGCCCCATGGCTCTTCCTT+CGG | - | Chr8:87849105-87849124 | MsG0880047542.01.T01:intron | 55.0% | |
| TCACCGAAGGAAGAGCCATG+GGG | + | Chr8:87849111-87849130 | None:intergenic | 55.0% | |
| GGAAGAGCCATGGGGCTACT+AGG | + | Chr8:87849103-87849122 | None:intergenic | 60.0% | |
| TGCTGCTGCAACCCCTGCAA+TGG | + | Chr8:87849927-87849946 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 87848860 | 87851629 | 87848860 | ID=MsG0880047542.01;Name=MsG0880047542.01 |
| Chr8 | mRNA | 87848860 | 87851629 | 87848860 | ID=MsG0880047542.01.T01;Parent=MsG0880047542.01;Name=MsG0880047542.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|8|0|411 |
| Chr8 | exon | 87851363 | 87851629 | 87851363 | ID=MsG0880047542.01.T01:exon:18585;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87851175 | 87851237 | 87851175 | ID=MsG0880047542.01.T01:exon:18584;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87850799 | 87850867 | 87850799 | ID=MsG0880047542.01.T01:exon:18583;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87850326 | 87850686 | 87850326 | ID=MsG0880047542.01.T01:exon:18582;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87849798 | 87849965 | 87849798 | ID=MsG0880047542.01.T01:exon:18581;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87849420 | 87849469 | 87849420 | ID=MsG0880047542.01.T01:exon:18580;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87849162 | 87849210 | 87849162 | ID=MsG0880047542.01.T01:exon:18579;Parent=MsG0880047542.01.T01 |
| Chr8 | exon | 87848860 | 87849068 | 87848860 | ID=MsG0880047542.01.T01:exon:18578;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87851363 | 87851629 | 87851363 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87851175 | 87851237 | 87851175 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87850799 | 87850867 | 87850799 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87850326 | 87850686 | 87850326 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87849798 | 87849965 | 87849798 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87849420 | 87849469 | 87849420 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87849162 | 87849210 | 87849162 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Chr8 | CDS | 87848860 | 87849068 | 87848860 | ID=MsG0880047542.01.T01:cds;Parent=MsG0880047542.01.T01 |
| Gene Sequence |
| Protein sequence |
