AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036925.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036925.01.T01 MTR_7g022890 99.250 400 3 0 1 400 1 400 0.0 828
MsG0780036925.01.T01 MTR_7g022890 99.410 339 2 0 62 400 9 347 0.0 701
MsG0780036925.01.T01 MTR_8g046550 60.733 382 140 5 21 395 12 390 9.89e-161 457
MsG0780036925.01.T01 MTR_2g064405 62.133 375 134 5 25 395 19 389 2.67e-159 454
MsG0780036925.01.T01 MTR_2g064405 66.454 313 103 2 84 395 1 312 1.18e-146 419
MsG0780036925.01.T01 MTR_3g080090 57.219 374 146 4 29 397 33 397 1.63e-144 416
MsG0780036925.01.T01 MTR_3g062610 57.317 328 135 2 69 396 72 394 7.37e-130 379
MsG0780036925.01.T01 MTR_5g075680 56.098 328 139 3 69 396 12 334 3.80e-126 367
MsG0780036925.01.T01 MTR_5g075680 56.098 328 139 3 69 396 65 387 9.12e-126 369
MsG0780036925.01.T01 MTR_3g062610 50.000 258 119 3 69 326 72 319 4.38e-83 257
MsG0780036925.01.T01 MTR_5g075680 50.211 237 114 2 69 305 65 297 1.34e-76 240
MsG0780036925.01.T01 MTR_5g075680 47.541 183 92 2 69 251 65 243 8.29e-51 171
MsG0780036925.01.T02 MTR_7g022890 99.250 400 3 0 1 400 1 400 0.0 828
MsG0780036925.01.T02 MTR_7g022890 99.410 339 2 0 62 400 9 347 0.0 701
MsG0780036925.01.T02 MTR_8g046550 60.733 382 140 5 21 395 12 390 9.89e-161 457
MsG0780036925.01.T02 MTR_2g064405 62.133 375 134 5 25 395 19 389 2.67e-159 454
MsG0780036925.01.T02 MTR_2g064405 66.454 313 103 2 84 395 1 312 1.18e-146 419
MsG0780036925.01.T02 MTR_3g080090 57.219 374 146 4 29 397 33 397 1.63e-144 416
MsG0780036925.01.T02 MTR_3g062610 57.317 328 135 2 69 396 72 394 7.37e-130 379
MsG0780036925.01.T02 MTR_5g075680 56.098 328 139 3 69 396 12 334 3.80e-126 367
MsG0780036925.01.T02 MTR_5g075680 56.098 328 139 3 69 396 65 387 9.12e-126 369
MsG0780036925.01.T02 MTR_3g062610 50.000 258 119 3 69 326 72 319 4.38e-83 257
MsG0780036925.01.T02 MTR_5g075680 50.211 237 114 2 69 305 65 297 1.34e-76 240
MsG0780036925.01.T02 MTR_5g075680 47.541 183 92 2 69 251 65 243 8.29e-51 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036925.01.T01 AT2G39450 81.313 396 72 1 5 400 1 394 0.0 608
MsG0780036925.01.T01 AT1G16310 59.898 394 138 5 13 395 41 425 4.91e-164 467
MsG0780036925.01.T01 AT1G79520 62.632 380 128 4 24 395 25 398 3.84e-163 464
MsG0780036925.01.T01 AT1G79520 61.240 387 134 5 24 395 25 410 8.28e-163 463
MsG0780036925.01.T01 AT1G79520 67.066 334 108 2 63 395 13 345 1.24e-162 461
MsG0780036925.01.T01 AT1G79520 67.066 334 108 2 63 395 13 345 1.24e-162 461
MsG0780036925.01.T01 AT1G16310 66.773 313 102 2 84 395 1 312 1.64e-150 429
MsG0780036925.01.T01 AT3G58060 53.977 352 157 3 50 396 51 402 4.98e-127 372
MsG0780036925.01.T01 AT3G58060 53.977 352 157 3 50 396 51 402 4.98e-127 372
MsG0780036925.01.T02 AT2G39450 81.313 396 72 1 5 400 1 394 0.0 608
MsG0780036925.01.T02 AT1G16310 59.898 394 138 5 13 395 41 425 4.91e-164 467
MsG0780036925.01.T02 AT1G79520 62.632 380 128 4 24 395 25 398 3.84e-163 464
MsG0780036925.01.T02 AT1G79520 61.240 387 134 5 24 395 25 410 8.28e-163 463
MsG0780036925.01.T02 AT1G79520 67.066 334 108 2 63 395 13 345 1.24e-162 461
MsG0780036925.01.T02 AT1G79520 67.066 334 108 2 63 395 13 345 1.24e-162 461
MsG0780036925.01.T02 AT1G16310 66.773 313 102 2 84 395 1 312 1.64e-150 429
MsG0780036925.01.T02 AT3G58060 53.977 352 157 3 50 396 51 402 4.98e-127 372
MsG0780036925.01.T02 AT3G58060 53.977 352 157 3 50 396 51 402 4.98e-127 372

Find 31 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAAGAGGCTCATGATAT+TGG 0.244926 7:+16606103 MsG0780036925.01.T01:CDS
TACGAGAAATAGAGTGAAAA+TGG 0.269958 7:-16606384 None:intergenic
TGCAAGAGGCTCATGATATT+GGG 0.283768 7:+16606104 MsG0780036925.01.T01:CDS
GCATGCACAAGCACATTCTT+AGG 0.345663 7:+16606213 MsG0780036925.01.T01:CDS
TTCAAAACTATACATACTTT+CGG 0.385238 7:+16606549 MsG0780036925.01.T01:three_prime_UTR
CTGAACAATTTCTCAGTACT+TGG 0.386522 7:-16606312 None:intergenic
AAACATGATACTTAGACATT+AGG 0.407688 7:-16606438 None:intergenic
TAAGACACATTGACACTGTT+CGG 0.424020 7:+16606017 MsG0780036925.01.T01:CDS
GAAAATGTGAATTCACTTGT+TGG 0.461809 7:+16605929 MsG0780036925.01.T01:CDS
ACAAAAGCACGCTCGATCTC+AGG 0.463499 7:-16606157 None:intergenic
AAGACACATTGACACTGTTC+GGG 0.476544 7:+16606018 MsG0780036925.01.T01:CDS
AGAAACTTACATACCTCTGC+TGG 0.477384 7:+16605978 MsG0780036925.01.T01:CDS
GAATGTGCTTGTGCATGCTC+AGG 0.480448 7:-16606208 None:intergenic
GTAAGTTTCTGAAGATACTC+TGG 0.516377 7:-16605965 None:intergenic
AATAAACTTCCTTACATGAC+AGG 0.520941 7:-16606357 None:intergenic
TCTTGCAAAGGCATGTCTGC+TGG 0.522402 7:-16606088 None:intergenic
ACTGTTCGGGCATATACATT+CGG 0.522461 7:+16606031 MsG0780036925.01.T01:CDS
ATGATACTTAGACATTAGGT+AGG 0.538457 7:-16606434 None:intergenic
AGCAGACATGCCTTTGCAAG+AGG 0.566228 7:+16606090 MsG0780036925.01.T01:CDS
CGGCTCTCACTACTTTGTCG+AGG 0.568299 7:+16606051 MsG0780036925.01.T01:CDS
GCTGTGAAGCCTGTCATGTA+AGG 0.568451 7:+16606348 MsG0780036925.01.T01:three_prime_UTR
CCTTGTGGTGGTTCCAGCAG+AGG 0.569864 7:-16605991 None:intergenic
GCAAGAGGCTCATGATATTG+GGG 0.588631 7:+16606105 MsG0780036925.01.T01:CDS
ATATCATGAGCCTCTTGCAA+AGG 0.600551 7:-16606100 None:intergenic
ATCTAAAACTAGAATATCAG+AGG 0.606587 7:+16606465 MsG0780036925.01.T01:intron
CAATGTGTCTTACAGCCTTG+TGG 0.618083 7:-16606006 None:intergenic
CTTTGTACACAATTCGCACA+TGG 0.622183 7:+16605891 MsG0780036925.01.T01:CDS
CACATGGTCAATGACAGTGT+TGG 0.625243 7:+16605907 MsG0780036925.01.T01:CDS
TGTGTCTTACAGCCTTGTGG+TGG 0.637411 7:-16606003 None:intergenic
CCTCTGCTGGAACCACCACA+AGG 0.649186 7:+16605991 MsG0780036925.01.T01:CDS
TGATACTTAGACATTAGGTA+GGG 0.649424 7:-16606433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAAAAAATATTAGA+GGG - Chr7:16605019-16605038 None:intergenic 10.0%
!! CAATGAAAAATAAATAAAAA+AGG - Chr7:16605208-16605227 None:intergenic 10.0%
!! TCAAAAAAAAAAAATATTAG+AGG - Chr7:16605020-16605039 None:intergenic 10.0%
!!! CTAATATTTTTTTTTTTTGA+AGG + Chr7:16605020-16605039 MsG0780036925.01.T01:intron 10.0%
!!! TATTTATTTTTCATTGTTAA+GGG + Chr7:16605212-16605231 MsG0780036925.01.T01:intron 10.0%
!!! TTATTTATTTTTCATTGTTA+AGG + Chr7:16605211-16605230 MsG0780036925.01.T01:intron 10.0%
!! AAAAAAATAAAGAAAGAGAA+AGG - Chr7:16601094-16601113 None:intergenic 15.0%
!! ATAGGATTAATTTACTAAAT+TGG + Chr7:16604794-16604813 MsG0780036925.01.T01:intron 15.0%
!! ATATATAGAATGAAAAATCT+AGG + Chr7:16606490-16606509 MsG0780036925.01.T01:intron 15.0%
!! ATTTAAATTTGAATGATCTT+TGG + Chr7:16604635-16604654 MsG0780036925.01.T01:intron 15.0%
!! CCATTAAAAAAAAAATTGAA+TGG - Chr7:16604675-16604694 None:intergenic 15.0%
!!! CCATTCAATTTTTTTTTTAA+TGG + Chr7:16604672-16604691 MsG0780036925.01.T01:intron 15.0%
!! AAACCTAAAAAAATCTTCTA+CGG + Chr7:16600783-16600802 MsG0780036925.01.T01:five_prime_UTR 20.0%
!! AACTAAAATGTGTAGATATT+AGG - Chr7:16604505-16604524 None:intergenic 20.0%
!! AACTTATTACACTTAAATCA+CGG - Chr7:16602660-16602679 None:intergenic 20.0%
!! AAGAATTACATGTAAGTAAA+AGG - Chr7:16605858-16605877 None:intergenic 20.0%
!! ACCAATTACCTATAAATTAA+TGG - Chr7:16603984-16604003 None:intergenic 20.0%
!! AGAATTACATGTAAGTAAAA+GGG - Chr7:16605857-16605876 None:intergenic 20.0%
!! ATACAATTTCAAAGATTCTA+TGG - Chr7:16601206-16601225 None:intergenic 20.0%
!! ATGTACATTCAAAATCATAT+TGG - Chr7:16606528-16606547 None:intergenic 20.0%
!! ATTCATCAATTGTTTATCAA+AGG - Chr7:16605320-16605339 None:intergenic 20.0%
!! ATTGACATTCCTATTTAATT+AGG - Chr7:16604330-16604349 None:intergenic 20.0%
!! CAATTACCTATAAATTAATG+GGG - Chr7:16603982-16604001 None:intergenic 20.0%
!! CCAATTACCTATAAATTAAT+GGG - Chr7:16603983-16604002 None:intergenic 20.0%
!! CTAATCTGAGAATAAATTAA+CGG - Chr7:16601389-16601408 None:intergenic 20.0%
!! GATTTATAGCCTAATTAAAT+AGG + Chr7:16604318-16604337 MsG0780036925.01.T01:intron 20.0%
!! GTAAATAAATGCAATGAATA+AGG - Chr7:16604561-16604580 None:intergenic 20.0%
!! TATTATTAACAGCTGTTATT+TGG - Chr7:16601929-16601948 None:intergenic 20.0%
!! TCCTTTCTTATACTATATAT+GGG + Chr7:16604376-16604395 MsG0780036925.01.T01:intron 20.0%
!! TGTACATTCAAAATCATATT+GGG - Chr7:16606527-16606546 None:intergenic 20.0%
!! TTCAAAACTATACATACTTT+CGG + Chr7:16606549-16606568 MsG0780036925.01.T01:three_prime_UTR 20.0%
!! TTCCTTTCTTATACTATATA+TGG + Chr7:16604375-16604394 MsG0780036925.01.T01:intron 20.0%
!!! ATAATAGCAGAAATGATTTT+TGG + Chr7:16601796-16601815 MsG0780036925.01.T01:intron 20.0%
!!! TACAATTTGTTTTGTATCAA+TGG + Chr7:16602183-16602202 MsG0780036925.01.T01:intron 20.0%
!!! TCAAAGAACATTTTATAATG+TGG - Chr7:16601245-16601264 None:intergenic 20.0%
!!! TCTTGTTTTAGTTCAAAAAT+TGG - Chr7:16605125-16605144 None:intergenic 20.0%
!!! TTTATTCTCAGATTAGTTAT+CGG + Chr7:16601393-16601412 MsG0780036925.01.T01:intron 20.0%
! AAACATGATACTTAGACATT+AGG - Chr7:16606441-16606460 None:intergenic 25.0%
! AACAGCTGTTAATAATAAAG+TGG + Chr7:16601932-16601951 MsG0780036925.01.T01:intron 25.0%
! AATATTAGAGGGATTTGAAA+TGG - Chr7:16605008-16605027 None:intergenic 25.0%
! ACAGCTGTTAATAATAAAGT+GGG + Chr7:16601933-16601952 MsG0780036925.01.T01:intron 25.0%
! ACCCATATATAGTATAAGAA+AGG - Chr7:16604380-16604399 None:intergenic 25.0%
! ATAGTATAAGAAAGGAATCA+TGG - Chr7:16604372-16604391 None:intergenic 25.0%
! ATGTAATAAGATGTTTCCAT+AGG + Chr7:16603329-16603348 MsG0780036925.01.T01:intron 25.0%
! CAAAACAGGATATTAATATG+AGG - Chr7:16603719-16603738 None:intergenic 25.0%
! CATCCAATCATCAAAATAAT+TGG - Chr7:16604227-16604246 None:intergenic 25.0%
! CATTTCTGCTATTATTTGTA+GGG - Chr7:16601791-16601810 None:intergenic 25.0%
! CCCATTAATTTATAGGTAAT+TGG + Chr7:16603980-16603999 MsG0780036925.01.T01:intron 25.0%
! CTATATTGAACCAAATATTC+AGG - Chr7:16604728-16604747 None:intergenic 25.0%
! GAATTACATGTAAGTAAAAG+GGG - Chr7:16605856-16605875 None:intergenic 25.0%
! GATATGTAACAACTATAAGA+TGG - Chr7:16605823-16605842 None:intergenic 25.0%
! GGATTAATTTACTAAATTGG+TGG + Chr7:16604797-16604816 MsG0780036925.01.T01:intron 25.0%
! GTACATTCAAAATCATATTG+GGG - Chr7:16606526-16606545 None:intergenic 25.0%
! GTATTATAGAGATTCACATA+AGG - Chr7:16604286-16604305 None:intergenic 25.0%
! TAGTAGTTATGAATGTATCT+TGG + Chr7:16603768-16603787 MsG0780036925.01.T01:intron 25.0%
! TCATTTCTGCTATTATTTGT+AGG - Chr7:16601792-16601811 None:intergenic 25.0%
! TGAATATATAAAGAGCCATA+AGG - Chr7:16602282-16602301 None:intergenic 25.0%
! TTAATTAAGTGTTCTTGTCT+TGG + Chr7:16601132-16601151 MsG0780036925.01.T01:intron 25.0%
! TTAGCTTCTTAACAAAAAGT+TGG - Chr7:16601637-16601656 None:intergenic 25.0%
! TTTAGATCTAGAGAAGATAA+AGG - Chr7:16603107-16603126 None:intergenic 25.0%
! TTTGTCTAAATGAAATTTCC+AGG + Chr7:16604012-16604031 MsG0780036925.01.T01:intron 25.0%
!! AAATTGGTCTCCAAAAATAT+CGG - Chr7:16602038-16602057 None:intergenic 25.0%
!! AACAGTTAATAGTAGTTTGT+TGG + Chr7:16603955-16603974 MsG0780036925.01.T01:intron 25.0%
!! AAGGAATCATGGATAAATTT+TGG - Chr7:16604361-16604380 None:intergenic 25.0%
!! ACTAAGATGATGATGAAAAA+AGG + Chr7:16601861-16601880 MsG0780036925.01.T01:intron 25.0%
!! AGGAATCATGGATAAATTTT+GGG - Chr7:16604360-16604379 None:intergenic 25.0%
!! ATATGCTTTCTAAGTTTGTT+TGG + Chr7:16602779-16602798 MsG0780036925.01.T01:intron 25.0%
!! ATCTAAAACTAGAATATCAG+AGG + Chr7:16606465-16606484 MsG0780036925.01.T01:intron 25.0%
!! ATTAAGTTGTTTAGCTAAAG+AGG - Chr7:16603140-16603159 None:intergenic 25.0%
!! CTGAATATTTGGTTCAATAT+AGG + Chr7:16604726-16604745 MsG0780036925.01.T01:intron 25.0%
!! CTGTTAGAATTTTACTGTTT+TGG + Chr7:16602230-16602249 MsG0780036925.01.T01:intron 25.0%
!! GATGTTTTCTTATGAAATCA+TGG + Chr7:16603264-16603283 MsG0780036925.01.T01:intron 25.0%
!! GTTCCTTTTAATATTGAACA+GGG + Chr7:16605051-16605070 MsG0780036925.01.T01:intron 25.0%
!! TGTTCCTTTTAATATTGAAC+AGG + Chr7:16605050-16605069 MsG0780036925.01.T01:intron 25.0%
!! TTGTACTTTTCCTGAATATT+TGG + Chr7:16604715-16604734 MsG0780036925.01.T01:intron 25.0%
!! TTGTTTCTTTAATAATGGGA+GGG + Chr7:16604769-16604788 MsG0780036925.01.T01:intron 25.0%
!! TTTCGGATAAATTTTCATCT+TGG + Chr7:16606566-16606585 MsG0780036925.01.T01:three_prime_UTR 25.0%
!! TTTTACTAATGAGATTGTGA+AGG + Chr7:16604135-16604154 MsG0780036925.01.T01:CDS 25.0%
!!! AAAAGGAACATTGATTTACT+TGG - Chr7:16605191-16605210 None:intergenic 25.0%
!!! ATATACACTGTAAGTTGATT+TGG + Chr7:16603904-16603923 MsG0780036925.01.T01:intron 25.0%
!!! CAATTATTTTGATGATTGGA+TGG + Chr7:16604225-16604244 MsG0780036925.01.T01:CDS 25.0%
!!! GTTTTAGTTCAAAAATTGGA+GGG - Chr7:16605121-16605140 None:intergenic 25.0%
!!! GTTTTCTTTTCTGTTTTGTT+AGG + Chr7:16602954-16602973 MsG0780036925.01.T01:intron 25.0%
!!! GTTTTTGATATATTTGAAGC+TGG + Chr7:16602540-16602559 MsG0780036925.01.T01:intron 25.0%
!!! TAGAAAGTGTTATCAAATAG+CGG + Chr7:16605673-16605692 MsG0780036925.01.T01:intron 25.0%
!!! TGTTTTAGTTCAAAAATTGG+AGG - Chr7:16605122-16605141 None:intergenic 25.0%
!!! TGTTTTGTTGTTGAGAATTT+CGG + Chr7:16602473-16602492 MsG0780036925.01.T01:intron 25.0%
!!! TTTTAGTTCAAAAATTGGAG+GGG - Chr7:16605120-16605139 None:intergenic 25.0%
!!! TTTTGCTTTATTTCTTGCTA+TGG + Chr7:16602728-16602747 MsG0780036925.01.T01:intron 25.0%
AAAATTGTGTAATTGTGTGC+AGG + Chr7:16603810-16603829 MsG0780036925.01.T01:intron 30.0%
AAATTGTGTAATTGTGTGCA+GGG + Chr7:16603811-16603830 MsG0780036925.01.T01:intron 30.0%
AAGAAGAAATCTCTCATTAC+AGG + Chr7:16605499-16605518 MsG0780036925.01.T01:intron 30.0%
AATAAACTTCCTTACATGAC+AGG - Chr7:16606360-16606379 None:intergenic 30.0%
AATAGAAACCTTTGACATTC+CGG - Chr7:16603075-16603094 None:intergenic 30.0%
AATATCGAACATAGCTAACA+TGG + Chr7:16603508-16603527 MsG0780036925.01.T01:CDS 30.0%
AATCTTAGCAGTCAAGAAAA+TGG - Chr7:16605722-16605741 None:intergenic 30.0%
ACCAATTTGGATATTTACTC+AGG + Chr7:16602050-16602069 MsG0780036925.01.T01:intron 30.0%
ACCATAAGATAAATCCAGAA+AGG - Chr7:16603619-16603638 None:intergenic 30.0%
AGCTGTTAATAATAAAGTGG+GGG + Chr7:16601935-16601954 MsG0780036925.01.T01:intron 30.0%
AGTAACTCACTAAAATGTGT+GGG + Chr7:16604420-16604439 MsG0780036925.01.T01:intron 30.0%
ATAAAATCAATGTGTCTGTG+TGG - Chr7:16601365-16601384 None:intergenic 30.0%
ATAAGATAAATCCAGAAAGG+AGG - Chr7:16603616-16603635 None:intergenic 30.0%
ATATTTGTCTGCTATCAGTT+TGG + Chr7:16605294-16605313 MsG0780036925.01.T01:intron 30.0%
ATGAATGAGATTCATTCCTT+GGG + Chr7:16605334-16605353 MsG0780036925.01.T01:intron 30.0%
ATGATACTTAGACATTAGGT+AGG - Chr7:16606437-16606456 None:intergenic 30.0%
ATGTAACAACTATAAGATGG+CGG - Chr7:16605820-16605839 None:intergenic 30.0%
CAATCTCATTAGTAAAAGAG+CGG - Chr7:16604132-16604151 None:intergenic 30.0%
CAGCTGTTAATAATAAAGTG+GGG + Chr7:16601934-16601953 MsG0780036925.01.T01:intron 30.0%
CATTCAAATACAGCAGAAAA+AGG - Chr7:16604583-16604602 None:intergenic 30.0%
CCAATTTGGATATTTACTCA+GGG + Chr7:16602051-16602070 MsG0780036925.01.T01:intron 30.0%
CTCCCATTATTAAAGAAACA+AGG - Chr7:16604770-16604789 None:intergenic 30.0%
GAAAATGTGAATTCACTTGT+TGG + Chr7:16605929-16605948 MsG0780036925.01.T01:CDS 30.0%
GTTTAACAAATATCGGGATT+TGG + Chr7:16602429-16602448 MsG0780036925.01.T01:intron 30.0%
GTTTAGCTAAAGAGGATTAT+TGG - Chr7:16603132-16603151 None:intergenic 30.0%
TACGAGAAATAGAGTGAAAA+TGG - Chr7:16606387-16606406 None:intergenic 30.0%
TAGTAACTCACTAAAATGTG+TGG + Chr7:16604419-16604438 MsG0780036925.01.T01:intron 30.0%
TATTATGCTTTCAGTGACTT+TGG + Chr7:16604081-16604100 MsG0780036925.01.T01:CDS 30.0%
TCCTTTCTGGATTTATCTTA+TGG + Chr7:16603615-16603634 MsG0780036925.01.T01:CDS 30.0%
TGAAATCACTCATGTGATTT+CGG + Chr7:16601557-16601576 MsG0780036925.01.T01:intron 30.0%
TGAACTTCTTAATGTCAGTT+AGG + Chr7:16604946-16604965 MsG0780036925.01.T01:intron 30.0%
TGATACTTAGACATTAGGTA+GGG - Chr7:16606436-16606455 None:intergenic 30.0%
TTACAGTGTATATTAGTGTG+CGG - Chr7:16603897-16603916 None:intergenic 30.0%
TTATTCACTTTGTGCATGTT+TGG + Chr7:16601465-16601484 MsG0780036925.01.T01:intron 30.0%
TTTACTAAATTGGTGGAAAG+TGG + Chr7:16604804-16604823 MsG0780036925.01.T01:intron 30.0%
! CTAAATTAGCTCTCTCAAAT+TGG + Chr7:16601653-16601672 MsG0780036925.01.T01:intron 30.0%
! CTTGTTTCTTTAATAATGGG+AGG + Chr7:16604768-16604787 MsG0780036925.01.T01:intron 30.0%
! TGAAGCTGGATTTAAGTTAA+GGG + Chr7:16602554-16602573 MsG0780036925.01.T01:intron 30.0%
! TGTTATTTGGACATAAGAAC+TGG - Chr7:16601916-16601935 None:intergenic 30.0%
! TGTTGAGAATTTCGGTTTTT+GGG + Chr7:16602481-16602500 MsG0780036925.01.T01:intron 30.0%
! TTCTTGACTGCTAAGATTTT+AGG + Chr7:16605724-16605743 MsG0780036925.01.T01:intron 30.0%
! TTGAAGCTGGATTTAAGTTA+AGG + Chr7:16602553-16602572 MsG0780036925.01.T01:intron 30.0%
! TTGATCTGTTCCGATATTTT+TGG + Chr7:16602025-16602044 MsG0780036925.01.T01:intron 30.0%
! TTGTTGAGAATTTCGGTTTT+TGG + Chr7:16602480-16602499 MsG0780036925.01.T01:intron 30.0%
! TTTAATAATGGGAGGGAAAT+AGG + Chr7:16604776-16604795 MsG0780036925.01.T01:intron 30.0%
! TTTTCTGCTGTATTTGAATG+TGG + Chr7:16604583-16604602 MsG0780036925.01.T01:intron 30.0%
!! AAGATTTTAGGAACTACCAT+TGG + Chr7:16605736-16605755 MsG0780036925.01.T01:intron 30.0%
!! ATGTGCTTTATTTCTTGCTA+TGG + Chr7:16602831-16602850 MsG0780036925.01.T01:intron 30.0%
!! ATTTACTTGGTGTTTGATTG+AGG - Chr7:16605178-16605197 None:intergenic 30.0%
!! TAGAACTTGTTTCAGTTTTC+TGG + Chr7:16602336-16602355 MsG0780036925.01.T01:intron 30.0%
!! TGGTTTTTGTTATAGTAACG+AGG - Chr7:16600811-16600830 None:intergenic 30.0%
!!! CACTAGTTCGCTATTTTTTA+CGG + Chr7:16601884-16601903 MsG0780036925.01.T01:intron 30.0%
!!! GATATTTTTGGAGACCAATT+TGG + Chr7:16602037-16602056 MsG0780036925.01.T01:intron 30.0%
!!! GTTCCGTAGAAGATTTTTTT+AGG - Chr7:16600789-16600808 None:intergenic 30.0%
!!! TGGCCAATTATTTTGATGAT+TGG + Chr7:16604221-16604240 MsG0780036925.01.T01:CDS 30.0%
AAAAAAGTGATCCTGAGCAT+AGG - Chr7:16604161-16604180 None:intergenic 35.0%
AAGAGAAAATGCAGTTAGGT+TGG - Chr7:16600831-16600850 None:intergenic 35.0%
AATATAGTGTGTCCAGAATG+TGG - Chr7:16604471-16604490 None:intergenic 35.0%
AGCTATGTTCGATATTCTGA+TGG - Chr7:16603504-16603523 None:intergenic 35.0%
AGTAAGCTGCAAATAGCTTA+TGG + Chr7:16603299-16603318 MsG0780036925.01.T01:intron 35.0%
ATAATACCTTCAGCTTGACT+AGG + Chr7:16604035-16604054 MsG0780036925.01.T01:CDS 35.0%
ATAGAAACCTTTGACATTCC+GGG - Chr7:16603074-16603093 None:intergenic 35.0%
ATATGGGTAGAATTGAGTAC+AGG + Chr7:16604392-16604411 MsG0780036925.01.T01:intron 35.0%
CAAAATTATTTGCAGCCCTA+GGG - Chr7:16603866-16603885 None:intergenic 35.0%
CAAATATATCCTTTCCAGGT+AGG - Chr7:16605281-16605300 None:intergenic 35.0%
CAATCATGAATACCAGAAGA+GGG - Chr7:16601050-16601069 None:intergenic 35.0%
CAGACAAATATATCCTTTCC+AGG - Chr7:16605285-16605304 None:intergenic 35.0%
CCCTGAGTAAATATCCAAAT+TGG - Chr7:16602054-16602073 None:intergenic 35.0%
CGTCCAGGTTTAACAAATAT+CGG + Chr7:16602422-16602441 MsG0780036925.01.T01:intron 35.0%
CTGAACAATTTCTCAGTACT+TGG - Chr7:16606315-16606334 None:intergenic 35.0%
CTTCTTTCAGTTTCAGACAA+TGG + Chr7:16600954-16600973 MsG0780036925.01.T01:CDS 35.0%
GAAGAAGAGAAAATGCAGTT+AGG - Chr7:16600835-16600854 None:intergenic 35.0%
GATGAATGAGATTCATTCCT+TGG + Chr7:16605333-16605352 MsG0780036925.01.T01:intron 35.0%
GATGTGATCACTAATGTGAT+TGG + Chr7:16604181-16604200 MsG0780036925.01.T01:CDS 35.0%
GATTCAGAAAACGTCAAAAC+AGG - Chr7:16603733-16603752 None:intergenic 35.0%
GCTTATTTGAACTTACGATC+TGG - Chr7:16603385-16603404 None:intergenic 35.0%
GGAAGTTGTGTAGATACAAA+AGG + Chr7:16602450-16602469 MsG0780036925.01.T01:intron 35.0%
GTCCAGGTTTAACAAATATC+GGG + Chr7:16602423-16602442 MsG0780036925.01.T01:intron 35.0%
GTTGGACCCCATTAATTTAT+AGG + Chr7:16603973-16603992 MsG0780036925.01.T01:intron 35.0%
TAAGACACATTGACACTGTT+CGG + Chr7:16606017-16606036 MsG0780036925.01.T01:CDS 35.0%
TAATACCTTCAGCTTGACTA+GGG + Chr7:16604036-16604055 MsG0780036925.01.T01:CDS 35.0%
TACAAGGATAGAGTCTCATA+AGG - Chr7:16605255-16605274 None:intergenic 35.0%
TACAGTGTATATTAGTGTGC+GGG - Chr7:16603896-16603915 None:intergenic 35.0%
TATGATGCACAAAGTTTGAG+AGG - Chr7:16605574-16605593 None:intergenic 35.0%
TCAACGATGAATGAGATTAC+TGG - Chr7:16605396-16605415 None:intergenic 35.0%
TCACTAAAATGTGTGGGTAT+GGG + Chr7:16604426-16604445 MsG0780036925.01.T01:intron 35.0%
TCGTTGACAACTGTAATTAC+TGG + Chr7:16605409-16605428 MsG0780036925.01.T01:intron 35.0%
TCTGACTGATGCATAAACTT+TGG - Chr7:16603546-16603565 None:intergenic 35.0%
TCTGGTATTCATGATTGCTA+TGG + Chr7:16601053-16601072 MsG0780036925.01.T01:CDS 35.0%
TGGCCCTGTTCAATATTAAA+AGG - Chr7:16605057-16605076 None:intergenic 35.0%
TGGTGTTTGATTGAGGAAAA+TGG - Chr7:16605171-16605190 None:intergenic 35.0%
TTAATATGAGGACTGACCAA+TGG - Chr7:16603707-16603726 None:intergenic 35.0%
TTACATGTAAGTAAAAGGGG+TGG - Chr7:16605853-16605872 None:intergenic 35.0%
TTGTCAAATAGCAGGTATAG+CGG + Chr7:16605601-16605620 MsG0780036925.01.T01:intron 35.0%
TTTGACTCTATAGTCTCGTT+TGG - Chr7:16603412-16603431 None:intergenic 35.0%
! AGTTCCTTGTGTTTTCCTTA+TGG + Chr7:16602264-16602283 MsG0780036925.01.T01:intron 35.0%
! ATCCCGATATTTGTTAAACC+TGG - Chr7:16602428-16602447 None:intergenic 35.0%
! CAAGGTAAGTTGCTTTGATT+TGG + Chr7:16601511-16601530 MsG0780036925.01.T01:intron 35.0%
! GTAAGTTTCTGAAGATACTC+TGG - Chr7:16605968-16605987 None:intergenic 35.0%
! GTTTGGACTCTGCTATTTAA+CGG + Chr7:16602796-16602815 MsG0780036925.01.T01:intron 35.0%
! TGATTTGGCTATATTTCCTG+AGG + Chr7:16603919-16603938 MsG0780036925.01.T01:intron 35.0%
! TTTCTTGCTATGGAGTTGTT+TGG + Chr7:16602738-16602757 MsG0780036925.01.T01:intron 35.0%
!! CTGTGAGTTTGTTGAAATCA+AGG + Chr7:16601493-16601512 MsG0780036925.01.T01:intron 35.0%
!! TTGTTTTGTATCAATGGCTG+TGG + Chr7:16602189-16602208 MsG0780036925.01.T01:intron 35.0%
!! TTTCCAATAGGGTACTGATA+CGG - Chr7:16603671-16603690 None:intergenic 35.0%
!!! TTTTGAAATGACCGGGAAAA+TGG + Chr7:16600893-16600912 MsG0780036925.01.T01:intron 35.0%
AAGACACATTGACACTGTTC+GGG + Chr7:16606018-16606037 MsG0780036925.01.T01:CDS 40.0%
AATCCGTATCAGTACCCTAT+TGG + Chr7:16603665-16603684 MsG0780036925.01.T01:CDS 40.0%
AATGGCTGTGGTTGATTATG+AGG + Chr7:16602201-16602220 MsG0780036925.01.T01:intron 40.0%
ACTGTTCGGGCATATACATT+CGG + Chr7:16606031-16606050 MsG0780036925.01.T01:CDS 40.0%
AGAAACTTACATACCTCTGC+TGG + Chr7:16605978-16605997 MsG0780036925.01.T01:CDS 40.0%
AGAGAAAGCTCTTCTTCGTT+AGG - Chr7:16600936-16600955 None:intergenic 40.0%
AGAGCCATAAGGAAAACACA+AGG - Chr7:16602271-16602290 None:intergenic 40.0%
AGTACCCTATTGGAAAGAAG+CGG + Chr7:16603675-16603694 MsG0780036925.01.T01:CDS 40.0%
AGTTCAAAAATTGGAGGGGA+AGG - Chr7:16605116-16605135 None:intergenic 40.0%
ATATCATGAGCCTCTTGCAA+AGG - Chr7:16606103-16606122 None:intergenic 40.0%
ATCCACTTTAGACTCTCTTC+TGG + Chr7:16603589-16603608 MsG0780036925.01.T01:CDS 40.0%
ATGCAGTGTTGTCAAATAGC+AGG + Chr7:16605593-16605612 MsG0780036925.01.T01:intron 40.0%
ATTCATTGCCATCTATCCCA+AGG - Chr7:16605353-16605372 None:intergenic 40.0%
ATTGAGGAAAATGGACGAGA+GGG - Chr7:16605162-16605181 None:intergenic 40.0%
CATATCACAGACACAAACAC+TGG - Chr7:16601427-16601446 None:intergenic 40.0%
CATGATTGCTATGGTGTTCT+TGG + Chr7:16601062-16601081 MsG0780036925.01.T01:CDS 40.0%
CCAAAATTATTTGCAGCCCT+AGG - Chr7:16603867-16603886 None:intergenic 40.0%
CGCAGAAGCTGAAACAATTA+TGG - Chr7:16605439-16605458 None:intergenic 40.0%
CTAAATTGGTGGAAAGTGGT+TGG + Chr7:16604808-16604827 MsG0780036925.01.T01:intron 40.0%
CTATCCTTGTAATACCTACC+TGG + Chr7:16605264-16605283 MsG0780036925.01.T01:intron 40.0%
CTCACTAAAATGTGTGGGTA+TGG + Chr7:16604425-16604444 MsG0780036925.01.T01:intron 40.0%
CTCTATAGTCTCGTTTGGAT+TGG - Chr7:16603407-16603426 None:intergenic 40.0%
CTTACAATGATAGCACCAAC+AGG - Chr7:16604253-16604272 None:intergenic 40.0%
CTTGTAATACCTACCTGGAA+AGG + Chr7:16605269-16605288 MsG0780036925.01.T01:intron 40.0%
CTTTCCAGGTAGGTATTACA+AGG - Chr7:16605271-16605290 None:intergenic 40.0%
CTTTGTACACAATTCGCACA+TGG + Chr7:16605891-16605910 MsG0780036925.01.T01:CDS 40.0%
GACTATAGAGTCAAATGCCT+TGG + Chr7:16603417-16603436 MsG0780036925.01.T01:intron 40.0%
GAGTATCCACAATTGTATGC+AGG + Chr7:16603442-16603461 MsG0780036925.01.T01:intron 40.0%
GATGCGAAACTTTCAGACTA+TGG + Chr7:16602604-16602623 MsG0780036925.01.T01:intron 40.0%
GATTCATTCCTTGGGATAGA+TGG + Chr7:16605342-16605361 MsG0780036925.01.T01:intron 40.0%
GCAATCATGAATACCAGAAG+AGG - Chr7:16601051-16601070 None:intergenic 40.0%
GGAGCACAATGTCATTAAGT+TGG - Chr7:16601770-16601789 None:intergenic 40.0%
GTTCAAAAATTGGAGGGGAA+GGG - Chr7:16605115-16605134 None:intergenic 40.0%
GTTTATGCATCAGTCAGAAG+TGG + Chr7:16603548-16603567 MsG0780036925.01.T01:CDS 40.0%
GTTTGTATCAACTTTGCCTC+AGG - Chr7:16603938-16603957 None:intergenic 40.0%
TAATTGTGTGCAGGGAATTC+TGG + Chr7:16603819-16603838 MsG0780036925.01.T01:intron 40.0%
TAGTCTGAAAGTTTCGCATC+TGG - Chr7:16602604-16602623 None:intergenic 40.0%
TATCCACAATTGTATGCAGG+AGG + Chr7:16603445-16603464 MsG0780036925.01.T01:intron 40.0%
TGAATACCAGAAGAGGGTTT+AGG - Chr7:16601044-16601063 None:intergenic 40.0%
TGCAAGAGGCTCATGATATT+GGG + Chr7:16606104-16606123 MsG0780036925.01.T01:CDS 40.0%
TGGTAAGTCTGAACCCATTT+GGG - Chr7:16601750-16601769 None:intergenic 40.0%
TTGCAAGAGGCTCATGATAT+TGG + Chr7:16606103-16606122 MsG0780036925.01.T01:CDS 40.0%
TTGGTAAGTCTGAACCCATT+TGG - Chr7:16601751-16601770 None:intergenic 40.0%
! AATCCCTCCTCTCTCAATTT+TGG - Chr7:16605077-16605096 None:intergenic 40.0%
! CCTAGGGCTGCAAATAATTT+TGG + Chr7:16603864-16603883 MsG0780036925.01.T01:CDS 40.0%
! CTCTGTTAAGGCATCCATTT+CGG - Chr7:16603039-16603058 None:intergenic 40.0%
! GACTCTGCTATTTAACGGAA+AGG + Chr7:16602801-16602820 MsG0780036925.01.T01:intron 40.0%
! GTCTAAAGTGGATGCAATGA+TGG - Chr7:16603582-16603601 None:intergenic 40.0%
! TGGTCTAATTGCTGCACTTT+TGG + Chr7:16604201-16604220 MsG0780036925.01.T01:CDS 40.0%
! TTTCTGGAAGATGCTATCGA+TGG + Chr7:16602352-16602371 MsG0780036925.01.T01:intron 40.0%
!! ATACGGATTTGGTGTTTGCA+TGG - Chr7:16603654-16603673 None:intergenic 40.0%
!! ATAGGGTACTGATACGGATT+TGG - Chr7:16603665-16603684 None:intergenic 40.0%
!! TCAAGCTGAAGGTATTATCC+TGG - Chr7:16604033-16604052 None:intergenic 40.0%
!!! ACGACGTTTTTGAAATGACC+GGG + Chr7:16600886-16600905 MsG0780036925.01.T01:intron 40.0%
!!! CGGTTTTTGGGTAGATATCT+TGG + Chr7:16602493-16602512 MsG0780036925.01.T01:intron 40.0%
!!! GACGACGTTTTTGAAATGAC+CGG + Chr7:16600885-16600904 MsG0780036925.01.T01:intron 40.0%
!!! TCTAGTTCACTTTTTCGTCC+AGG + Chr7:16602407-16602426 MsG0780036925.01.T01:intron 40.0%
AAACCTTTGACATTCCGGGA+AGG - Chr7:16603070-16603089 None:intergenic 45.0%
AAAGAAGCGGATGCAACCAT+TGG + Chr7:16603688-16603707 MsG0780036925.01.T01:CDS 45.0%
AAATGGACGAGAGGGAAAGA+TGG - Chr7:16605154-16605173 None:intergenic 45.0%
AACACTTGGCCAACCCAAAT+GGG + Chr7:16601734-16601753 MsG0780036925.01.T01:intron 45.0%
AACAGGGCCAAAATTGAGAG+AGG + Chr7:16605067-16605086 MsG0780036925.01.T01:intron 45.0%
AAGACACCTAAACCCTCTTC+TGG + Chr7:16601035-16601054 MsG0780036925.01.T01:CDS 45.0%
AAGGAAACCACGCTCTGTTA+AGG - Chr7:16603051-16603070 None:intergenic 45.0%
AAGTCTGAACCCATTTGGGT+TGG - Chr7:16601746-16601765 None:intergenic 45.0%
AAGTGGATGCAATGATGGCT+AGG - Chr7:16603577-16603596 None:intergenic 45.0%
AGCACTTGTGAAACCGTTTG+AGG - Chr7:16603358-16603377 None:intergenic 45.0%
AGTGGATGCAATGATGGCTA+GGG - Chr7:16603576-16603595 None:intergenic 45.0%
CAATGTGTCTTACAGCCTTG+TGG - Chr7:16606009-16606028 None:intergenic 45.0%
CAATTGTGGATACTCAGCCA+AGG - Chr7:16603437-16603456 None:intergenic 45.0%
CACATGGTCAATGACAGTGT+TGG + Chr7:16605907-16605926 MsG0780036925.01.T01:CDS 45.0%
CAGTTTCAGACAATGGTGAC+CGG + Chr7:16600961-16600980 MsG0780036925.01.T01:CDS 45.0%
GATGATTGGATGGATCCTGT+TGG + Chr7:16604235-16604254 MsG0780036925.01.T01:CDS 45.0%
GATTGAGGAAAATGGACGAG+AGG - Chr7:16605163-16605182 None:intergenic 45.0%
GCAAGAGGCTCATGATATTG+GGG + Chr7:16606105-16606124 MsG0780036925.01.T01:CDS 45.0%
GCACTTGTGAAACCGTTTGA+GGG - Chr7:16603357-16603376 None:intergenic 45.0%
GCATCCGCTTCTTTCCAATA+GGG - Chr7:16603682-16603701 None:intergenic 45.0%
GCATGCACAAGCACATTCTT+AGG + Chr7:16606213-16606232 MsG0780036925.01.T01:CDS 45.0%
GCTTGAAGGCTTTACCGAAA+TGG + Chr7:16603022-16603041 MsG0780036925.01.T01:CDS 45.0%
GTCCAGAAGAGAGTCTAAAG+TGG - Chr7:16603594-16603613 None:intergenic 45.0%
TAGCTCTCTCAAATTGGCAC+CGG + Chr7:16601659-16601678 MsG0780036925.01.T01:intron 45.0%
TCAGTGCTCAAAAGAGCCAA+TGG - Chr7:16605755-16605774 None:intergenic 45.0%
TGAAATGACCGGGAAAATGG+TGG + Chr7:16600896-16600915 MsG0780036925.01.T01:intron 45.0%
TGCATCCGCTTCTTTCCAAT+AGG - Chr7:16603683-16603702 None:intergenic 45.0%
TGTAATTCTTCCACTGCAGC+TGG + Chr7:16605868-16605887 MsG0780036925.01.T01:intron 45.0%
TTGGAGTATGCTCCTTCTCA+AGG - Chr7:16601703-16601722 None:intergenic 45.0%
TTGTTCCCTAGTCAAGCTGA+AGG - Chr7:16604044-16604063 None:intergenic 45.0%
TTTCCATAGGCTCCCTCAAA+CGG + Chr7:16603342-16603361 MsG0780036925.01.T01:intron 45.0%
TTTCCTTCCCGGAATGTCAA+AGG + Chr7:16603064-16603083 MsG0780036925.01.T01:CDS 45.0%
! ACAACTATAAGATGGCGGCA+AGG - Chr7:16605815-16605834 None:intergenic 45.0%
! TTGAGAAGGAGCATACTCCA+AGG + Chr7:16601702-16601721 MsG0780036925.01.T01:intron 45.0%
!! GCTTTAGAGCTACGGCATAA+CGG + Chr7:16605625-16605644 MsG0780036925.01.T01:intron 45.0%
!! GTGATGATGGATGGTTCCTT+TGG + Chr7:16604864-16604883 MsG0780036925.01.T01:intron 45.0%
!!! TCTGGTTTTTGCCTCTGTCA+TGG + Chr7:16603837-16603856 MsG0780036925.01.T01:CDS 45.0%
!! AAATAAAATAAAATAAAAAG+AGG - Chr7:16602085-16602104 None:intergenic 5.0%
!!! TTTAATTTCAAATTTATTTA+CGG + Chr7:16601606-16601625 MsG0780036925.01.T01:intron 5.0%
AAACCGTTTGAGGGAGCCTA+TGG - Chr7:16603348-16603367 None:intergenic 50.0%
AGCAGACATGCCTTTGCAAG+AGG + Chr7:16606090-16606109 MsG0780036925.01.T01:CDS 50.0%
AGCTCTCTCAAATTGGCACC+GGG + Chr7:16601660-16601679 MsG0780036925.01.T01:intron 50.0%
AGGAGCGAGATAAGTTAGCC+AGG + Chr7:16603465-16603484 MsG0780036925.01.T01:CDS 50.0%
AGGGCCAAAATTGAGAGAGG+AGG + Chr7:16605070-16605089 MsG0780036925.01.T01:intron 50.0%
ATGCTCCTTCTCAAGGTCTC+AGG - Chr7:16601696-16601715 None:intergenic 50.0%
ATGGATGCCTTAACAGAGCG+TGG + Chr7:16603041-16603060 MsG0780036925.01.T01:CDS 50.0%
CAACACTTGGCCAACCCAAA+TGG + Chr7:16601733-16601752 MsG0780036925.01.T01:intron 50.0%
GAATGTGCTTGTGCATGCTC+AGG - Chr7:16606211-16606230 None:intergenic 50.0%
GATTGTGAAGGCCTATGCTC+AGG + Chr7:16604147-16604166 MsG0780036925.01.T01:CDS 50.0%
GCTCCTCCTGCATACAATTG+TGG - Chr7:16603451-16603470 None:intergenic 50.0%
GCTGTGAAGCCTGTCATGTA+AGG + Chr7:16606348-16606367 MsG0780036925.01.T01:three_prime_UTR 50.0%
GGGCCAAAATTGAGAGAGGA+GGG + Chr7:16605071-16605090 MsG0780036925.01.T01:intron 50.0%
GTATCCACTGTGCCACATTC+TGG + Chr7:16604456-16604475 MsG0780036925.01.T01:intron 50.0%
TACCTCCACCACACTACCAA+AGG - Chr7:16604883-16604902 None:intergenic 50.0%
TCGAACCTGAGACCTTGAGA+AGG + Chr7:16601688-16601707 MsG0780036925.01.T01:intron 50.0%
TCTCTTCTGGACCTCCTTTC+TGG + Chr7:16603602-16603621 MsG0780036925.01.T01:CDS 50.0%
TGCTGAGTACTATCAGCAGC+AGG + Chr7:16602992-16603011 MsG0780036925.01.T01:CDS 50.0%
! ACAAAAGCACGCTCGATCTC+AGG - Chr7:16606160-16606179 None:intergenic 50.0%
! CAGCAGGTTGAAGTGCTTGA+AGG + Chr7:16603008-16603027 MsG0780036925.01.T01:CDS 50.0%
! GCACTGACACTTCTGATCGA+AGG + Chr7:16601300-16601319 MsG0780036925.01.T01:intron 50.0%
! TCTTGCAAAGGCATGTCTGC+TGG - Chr7:16606091-16606110 None:intergenic 50.0%
! TGGTGGAAAGTGGTTGGTGT+TGG + Chr7:16604814-16604833 MsG0780036925.01.T01:intron 50.0%
! TGTGTCTTACAGCCTTGTGG+TGG - Chr7:16606006-16606025 None:intergenic 50.0%
!! ATAGCGGCGCTTTAGAGCTA+CGG + Chr7:16605617-16605636 MsG0780036925.01.T01:intron 50.0%
!! CATTTGGGTTGGCCAAGTGT+TGG - Chr7:16601735-16601754 None:intergenic 50.0%
!! GGATGGTTCCTTTGGTAGTG+TGG + Chr7:16604872-16604891 MsG0780036925.01.T01:intron 50.0%
!! GTTGGTGTTGGCAGTGTTGA+AGG + Chr7:16604826-16604845 MsG0780036925.01.T01:intron 50.0%
!! TGGTTCCTTTGGTAGTGTGG+TGG + Chr7:16604875-16604894 MsG0780036925.01.T01:intron 50.0%
!! TGTGTGGTGGTGATGATGGA+TGG + Chr7:16604855-16604874 MsG0780036925.01.T01:intron 50.0%
!! TTCCTTTGGTAGTGTGGTGG+AGG + Chr7:16604878-16604897 MsG0780036925.01.T01:intron 50.0%
!! TTTGGTAGTGTGGTGGAGGT+AGG + Chr7:16604882-16604901 MsG0780036925.01.T01:intron 50.0%
ACAATGGTGACCGGTCATGG+CGG + Chr7:16600970-16600989 MsG0780036925.01.T01:CDS 55.0%
ACAGAGCGTGGTTTCCTTCC+CGG + Chr7:16603053-16603072 MsG0780036925.01.T01:CDS 55.0%
ACATGGTGCACTAGTGGCGA+GGG + Chr7:16604910-16604929 MsG0780036925.01.T01:intron 55.0%
ATTGGAGGGGAAGGGAACGA+AGG - Chr7:16605107-16605126 None:intergenic 55.0%
CAAGGTCTCACGCCAACACT+TGG + Chr7:16601720-16601739 MsG0780036925.01.T01:intron 55.0%
CAGACAATGGTGACCGGTCA+TGG + Chr7:16600967-16600986 MsG0780036925.01.T01:CDS 55.0%
CGAAGTTCAACCGCCATGAC+CGG - Chr7:16600983-16601002 None:intergenic 55.0%
CGGCTCTCACTACTTTGTCG+AGG + Chr7:16606051-16606070 MsG0780036925.01.T01:CDS 55.0%
GAGAGGACATGGTGCACTAG+TGG + Chr7:16604904-16604923 MsG0780036925.01.T01:intron 55.0%
GCTCTCTCAAATTGGCACCG+GGG + Chr7:16601661-16601680 MsG0780036925.01.T01:intron 55.0%
GTCTCAGGTTCGATTCTCCC+CGG - Chr7:16601681-16601700 None:intergenic 55.0%
GTGTACAAAGCCAGCTGCAG+TGG - Chr7:16605881-16605900 None:intergenic 55.0%
GTGTCCAGAATGTGGCACAG+TGG - Chr7:16604463-16604482 None:intergenic 55.0%
GTGTTGAAGGCTGGTGTGTG+TGG + Chr7:16604839-16604858 MsG0780036925.01.T01:intron 55.0%
TGCACTAGTGGCGAGGGTAA+AGG + Chr7:16604916-16604935 MsG0780036925.01.T01:intron 55.0%
TTGAAGGCTGGTGTGTGTGG+TGG + Chr7:16604842-16604861 MsG0780036925.01.T01:intron 55.0%
TTGGAGGGGAAGGGAACGAA+GGG - Chr7:16605106-16605125 None:intergenic 55.0%
! CACCGTCTCCACCATTTTCC+CGG - Chr7:16600907-16600926 None:intergenic 55.0%
! GACCGGGAAAATGGTGGAGA+CGG + Chr7:16600902-16600921 MsG0780036925.01.T01:CDS 55.0%
! GGTGTGTGTGGTGGTGATGA+TGG + Chr7:16604851-16604870 MsG0780036925.01.T01:intron 55.0%
! GTGTTGGCAGTGTTGAAGGC+TGG + Chr7:16604830-16604849 MsG0780036925.01.T01:intron 55.0%
! TAGTGTGGTGGAGGTAGGAG+AGG + Chr7:16604887-16604906 MsG0780036925.01.T01:intron 55.0%
! TGACTAGGGAACAAGAGCGC+TGG + Chr7:16604050-16604069 MsG0780036925.01.T01:CDS 55.0%
!! CAAGTGTTGGCGTGAGACCT+TGG - Chr7:16601722-16601741 None:intergenic 55.0%
!! GAACAAGAGCGCTGGGTTGT+GGG + Chr7:16604058-16604077 MsG0780036925.01.T01:CDS 55.0%
!! GACTAGGGAACAAGAGCGCT+GGG + Chr7:16604051-16604070 MsG0780036925.01.T01:CDS 55.0%
CCTCTGCTGGAACCACCACA+AGG + Chr7:16605991-16606010 MsG0780036925.01.T01:CDS 60.0%
CCTCTGTCATGGCGACCCTA+GGG + Chr7:16603848-16603867 MsG0780036925.01.T01:CDS 60.0%
CCTTGTGGTGGTTCCAGCAG+AGG - Chr7:16605994-16606013 None:intergenic 60.0%
GACATGGTGCACTAGTGGCG+AGG + Chr7:16604909-16604928 MsG0780036925.01.T01:intron 60.0%
GATGGCAAACGTCTCGCTCC+TGG - Chr7:16603486-16603505 None:intergenic 60.0%
GGTGGAGGTAGGAGAGGACA+TGG + Chr7:16604893-16604912 MsG0780036925.01.T01:intron 60.0%
TGGAGGGGAAGGGAACGAAG+GGG - Chr7:16605105-16605124 None:intergenic 60.0%
! CGGGAAAATGGTGGAGACGG+TGG + Chr7:16600905-16600924 MsG0780036925.01.T01:CDS 60.0%
!! GGAACAAGAGCGCTGGGTTG+TGG + Chr7:16604057-16604076 MsG0780036925.01.T01:CDS 60.0%
CCCTAGGGTCGCCATGACAG+AGG - Chr7:16603851-16603870 None:intergenic 65.0%
GCCTCTGTCATGGCGACCCT+AGG + Chr7:16603847-16603866 MsG0780036925.01.T01:CDS 65.0%
GGAGGGGAAGGGAACGAAGG+GGG - Chr7:16605104-16605123 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 16600768 16606604 16600768 ID=MsG0780036925.01;Name=MsG0780036925.01
Chr7 mRNA 16600768 16606604 16600768 ID=MsG0780036925.01.T01;Parent=MsG0780036925.01;Name=MsG0780036925.01.T01;_AED=0.39;_eAED=0.39;_QI=132|1|1|1|0.83|0.71|7|308|400
Chr7 exon 16605887 16606479 16605887 ID=MsG0780036925.01.T01:exon:11396;Parent=MsG0780036925.01.T01
Chr7 exon 16606542 16606604 16606542 ID=MsG0780036925.01.T01:exon:11397;Parent=MsG0780036925.01.T01
Chr7 five_prime_UTR 16600768 16600899 16600768 ID=MsG0780036925.01.T01:five_prime_utr;Parent=MsG0780036925.01.T01
Chr7 CDS 16600900 16601083 16600900 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 CDS 16602976 16603085 16602976 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 CDS 16603464 16603709 16603464 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 CDS 16603832 16603912 16603832 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 CDS 16604034 16604267 16604034 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 CDS 16605887 16606234 16605887 ID=MsG0780036925.01.T01:cds;Parent=MsG0780036925.01.T01
Chr7 three_prime_UTR 16606235 16606479 16606235 ID=MsG0780036925.01.T01:three_prime_utr;Parent=MsG0780036925.01.T01
Chr7 three_prime_UTR 16606542 16606604 16606542 ID=MsG0780036925.01.T01:three_prime_utr;Parent=MsG0780036925.01.T01
Chr7 mRNA 16600768 16606500 16600768 ID=MsG0780036925.01.T02;Parent=MsG0780036925.01;Name=MsG0780036925.01.T02;_AED=0.39;_eAED=0.39;_QI=132|1|1|1|1|1|6|266|400
Chr7 exon 16605887 16606500 16605887 ID=MsG0780036925.01.T02:exon:11398;Parent=MsG0780036925.01.T02
Chr7 five_prime_UTR 16600768 16600899 16600768 ID=MsG0780036925.01.T02:five_prime_utr;Parent=MsG0780036925.01.T02
Chr7 CDS 16600900 16601083 16600900 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 CDS 16602976 16603085 16602976 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 CDS 16603464 16603709 16603464 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 CDS 16603832 16603912 16603832 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 CDS 16604034 16604267 16604034 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 CDS 16605887 16606234 16605887 ID=MsG0780036925.01.T02:cds;Parent=MsG0780036925.01.T02
Chr7 three_prime_UTR 16606235 16606500 16606235 ID=MsG0780036925.01.T02:three_prime_utr;Parent=MsG0780036925.01.T02
Gene Sequence

>MsG0780036925.01.T01

ATGACCGGGAAAATGGTGGAGACGGTGGAGCAACCTAACGAAGAAGAGCTTTCTCTTCTTTCAGTTTCAGACAATGGTGACCGGTCATGGCGGTTGAACTTCGACTCTTTTCAGTTGAATTCTCAGCATACTGAAAAGACACCTAAACCCTCTTCTGGTATTCATGATTGCTATGGTGTTCTTGGTCAAGAAGATAATATTGCTGAGTACTATCAGCAGCAGGTTGAAGTGCTTGAAGGCTTTACCGAAATGGATGCCTTAACAGAGCGTGGTTTCCTTCCCGGAATGTCAAAGGAGGAGCGAGATAAGTTAGCCAGGAGCGAGACGTTTGCCATCAGAATATCGAACATAGCTAACATGGTTCTTTTTACTGCCAAAGTTTATGCATCAGTCAGAAGTGGCTCCCTAGCCATCATTGCATCCACTTTAGACTCTCTTCTGGACCTCCTTTCTGGATTTATCTTATGGTTCACTGCATTTTCCATGCAAACACCAAATCCGTATCAGTACCCTATTGGAAAGAAGCGGATGCAACCATTGGGAATTCTGGTTTTTGCCTCTGTCATGGCGACCCTAGGGCTGCAAATAATTTTGGAGTCTGCCCGCACACTAATATACACTGATAATACCTTCAGCTTGACTAGGGAACAAGAGCGCTGGGTTGTGGGTATTATGCTTTCAGTGACTTTGGTGAAATTCATGCTAATGATTTATTGCCGCTCTTTTACTAATGAGATTGTGAAGGCCTATGCTCAGGATCACTTTTTTGATGTGATCACTAATGTGATTGGTCTAATTGCTGCACTTTTGGCCAATTATTTTGATGATTGGATGGATCCTGTTGGTGCTATCATTCTGGCTTTGTACACAATTCGCACATGGTCAATGACAGTGTTGGAAAATGTGAATTCACTTGTTGGAAGATCAGCTGCACCAGAGTATCTTCAGAAACTTACATACCTCTGCTGGAACCACCACAAGGCTGTAAGACACATTGACACTGTTCGGGCATATACATTCGGCTCTCACTACTTTGTCGAGGTTGATATCGTTCTACCAGCAGACATGCCTTTGCAAGAGGCTCATGATATTGGGGAATCATTGCAAGAGAAGCTCGAACTTTTGCCTGAGATCGAGCGTGCTTTTGTTCATCTTGATTATGAATTCAGTCACAAACCTGAGCATGCACAAGCACATTCTTAG

>MsG0780036925.01.T02

ATGACCGGGAAAATGGTGGAGACGGTGGAGCAACCTAACGAAGAAGAGCTTTCTCTTCTTTCAGTTTCAGACAATGGTGACCGGTCATGGCGGTTGAACTTCGACTCTTTTCAGTTGAATTCTCAGCATACTGAAAAGACACCTAAACCCTCTTCTGGTATTCATGATTGCTATGGTGTTCTTGGTCAAGAAGATAATATTGCTGAGTACTATCAGCAGCAGGTTGAAGTGCTTGAAGGCTTTACCGAAATGGATGCCTTAACAGAGCGTGGTTTCCTTCCCGGAATGTCAAAGGAGGAGCGAGATAAGTTAGCCAGGAGCGAGACGTTTGCCATCAGAATATCGAACATAGCTAACATGGTTCTTTTTACTGCCAAAGTTTATGCATCAGTCAGAAGTGGCTCCCTAGCCATCATTGCATCCACTTTAGACTCTCTTCTGGACCTCCTTTCTGGATTTATCTTATGGTTCACTGCATTTTCCATGCAAACACCAAATCCGTATCAGTACCCTATTGGAAAGAAGCGGATGCAACCATTGGGAATTCTGGTTTTTGCCTCTGTCATGGCGACCCTAGGGCTGCAAATAATTTTGGAGTCTGCCCGCACACTAATATACACTGATAATACCTTCAGCTTGACTAGGGAACAAGAGCGCTGGGTTGTGGGTATTATGCTTTCAGTGACTTTGGTGAAATTCATGCTAATGATTTATTGCCGCTCTTTTACTAATGAGATTGTGAAGGCCTATGCTCAGGATCACTTTTTTGATGTGATCACTAATGTGATTGGTCTAATTGCTGCACTTTTGGCCAATTATTTTGATGATTGGATGGATCCTGTTGGTGCTATCATTCTGGCTTTGTACACAATTCGCACATGGTCAATGACAGTGTTGGAAAATGTGAATTCACTTGTTGGAAGATCAGCTGCACCAGAGTATCTTCAGAAACTTACATACCTCTGCTGGAACCACCACAAGGCTGTAAGACACATTGACACTGTTCGGGCATATACATTCGGCTCTCACTACTTTGTCGAGGTTGATATCGTTCTACCAGCAGACATGCCTTTGCAAGAGGCTCATGATATTGGGGAATCATTGCAAGAGAAGCTCGAACTTTTGCCTGAGATCGAGCGTGCTTTTGTTCATCTTGATTATGAATTCAGTCACAAACCTGAGCATGCACAAGCACATTCTTAG

Protein sequence

>MsG0780036925.01.T01

MTGKMVETVEQPNEEELSLLSVSDNGDRSWRLNFDSFQLNSQHTEKTPKPSSGIHDCYGVLGQEDNIAEYYQQQVEVLEGFTEMDALTERGFLPGMSKEERDKLARSETFAIRISNIANMVLFTAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESARTLIYTDNTFSLTREQERWVVGIMLSVTLVKFMLMIYCRSFTNEIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPADMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEFSHKPEHAQAHS*

>MsG0780036925.01.T02

MTGKMVETVEQPNEEELSLLSVSDNGDRSWRLNFDSFQLNSQHTEKTPKPSSGIHDCYGVLGQEDNIAEYYQQQVEVLEGFTEMDALTERGFLPGMSKEERDKLARSETFAIRISNIANMVLFTAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESARTLIYTDNTFSLTREQERWVVGIMLSVTLVKFMLMIYCRSFTNEIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPADMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEFSHKPEHAQAHS*