AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019175.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019175.01.T01 MTR_4g024710 68.667 300 34 2 260 508 57 347 1.93e-129 380
MsG0480019175.01.T01 MTR_4g024745 68.683 281 28 2 262 491 13 284 6.06e-119 351
MsG0480019175.01.T01 MTR_8g014260 57.191 299 66 4 262 508 163 451 4.05e-97 301
MsG0480019175.01.T01 MTR_8g014260 55.208 192 55 7 1 190 1 163 8.05e-47 169
MsG0480019175.01.T01 MTR_4g024720 57.269 227 55 4 1 211 1 201 3.69e-72 228
MsG0480019175.01.T01 MTR_8g014160 34.834 511 198 19 12 508 36 425 6.32e-57 196
MsG0480019175.01.T01 MTR_8g445780 47.934 242 73 3 262 452 150 389 2.08e-55 191
MsG0480019175.01.T01 MTR_8g014210 46.667 240 67 3 320 508 2 231 2.84e-55 185
MsG0480019175.01.T01 MTR_8g077460 46.154 247 106 5 262 508 156 375 5.91e-55 189
MsG0480019175.01.T01 MTR_8g077460 45.503 189 65 6 1 186 1 154 6.17e-30 120
MsG0480019175.01.T01 MTR_8g070950 30.370 540 238 23 1 508 1 434 2.76e-41 154
MsG0480019175.01.T01 MTR_5g021550 46.448 183 66 6 7 186 9 162 9.21e-39 139
MsG0480019175.01.T01 MTR_5g092960 37.785 307 114 8 266 507 167 461 1.85e-38 146
MsG0480019175.01.T01 MTR_5g092960 36.508 189 85 7 1 186 5 161 1.80e-21 97.4
MsG0480019175.01.T01 MTR_8g062310 28.791 521 225 21 17 508 25 428 4.37e-36 139
MsG0480019175.01.T01 MTR_8g468760 35.943 281 127 8 262 507 156 418 1.40e-34 135
MsG0480019175.01.T01 MTR_8g468760 35.519 183 82 8 10 186 2 154 3.38e-17 84.3
MsG0480019175.01.T01 MTR_8g468840 35.974 303 122 10 262 505 158 447 3.02e-33 131
MsG0480019175.01.T01 MTR_8g468840 36.316 190 83 8 1 186 1 156 1.76e-18 88.2
MsG0480019175.01.T01 MTR_4g032730 28.467 548 245 26 14 507 12 466 2.45e-30 123
MsG0480019175.01.T01 MTR_8g014290 41.935 186 74 6 8 186 1 159 1.33e-29 114
MsG0480019175.01.T01 MTR_2g083840 31.803 305 138 11 262 508 165 457 5.68e-29 119
MsG0480019175.01.T01 MTR_2g083840 33.333 183 89 7 7 186 11 163 5.07e-17 84.0
MsG0480019175.01.T01 MTR_8g467800 32.484 314 130 10 260 508 157 453 1.87e-28 118
MsG0480019175.01.T01 MTR_8g058970 33.223 301 145 11 262 508 179 477 6.80e-26 110
MsG0480019175.01.T01 MTR_8g058970 35.961 203 84 8 3 186 2 177 8.11e-23 101
MsG0480019175.01.T01 MTR_8g014230 58.621 87 27 1 412 498 18 95 1.20e-25 101
MsG0480019175.01.T01 MTR_8g468810 37.097 186 83 7 12 194 20 174 2.94e-25 106
MsG0480019175.01.T01 MTR_8g468810 39.310 145 85 3 262 406 168 309 8.25e-18 85.1
MsG0480019175.01.T01 MTR_8g468810 37.097 186 83 7 12 194 20 174 3.34e-25 106
MsG0480019175.01.T01 MTR_8g468810 39.310 145 85 3 262 406 168 309 1.08e-17 84.3
MsG0480019175.01.T01 MTR_8g468810 37.097 186 83 7 12 194 20 174 6.44e-25 106
MsG0480019175.01.T01 MTR_8g468810 39.310 145 85 3 262 406 168 309 1.47e-17 84.7
MsG0480019175.01.T01 MTR_8g468810 37.097 186 83 7 12 194 20 174 2.54e-24 104
MsG0480019175.01.T01 MTR_8g468810 35.349 215 124 6 262 476 168 367 1.47e-18 87.8
MsG0480019175.01.T01 MTR_8g468810 37.097 186 83 7 12 194 20 174 5.56e-24 105
MsG0480019175.01.T01 MTR_8g468810 31.457 302 146 11 262 508 168 463 1.03e-21 98.2
MsG0480019175.01.T01 MTR_8g062270 28.197 305 147 6 262 507 162 453 1.24e-22 100
MsG0480019175.01.T01 MTR_8g062270 36.872 179 76 6 14 186 13 160 8.35e-17 83.2
MsG0480019175.01.T01 MTR_5g092960 36.508 189 85 7 1 186 5 161 6.67e-22 98.2
MsG0480019175.01.T01 MTR_5g092960 43.590 156 78 3 266 412 167 321 3.24e-18 87.0
MsG0480019175.01.T01 MTR_8g058965 31.068 309 135 11 266 508 160 456 1.39e-21 97.8
MsG0480019175.01.T01 MTR_8g058965 37.017 181 80 7 9 186 5 154 1.81e-18 88.2
MsG0480019175.01.T01 MTR_4g024770 51.163 86 19 1 1 86 8 70 3.83e-20 85.1
MsG0480019175.01.T01 MTR_8g469020 37.931 174 78 5 17 189 7 151 9.89e-20 92.0
MsG0480019175.01.T01 MTR_8g469020 29.299 314 143 10 262 508 150 451 2.22e-19 91.3
MsG0480019175.01.T01 MTR_8g062010 29.452 292 142 13 266 508 154 430 1.01e-18 89.0
MsG0480019175.01.T01 MTR_8g062010 31.818 176 88 6 13 187 5 149 2.39e-14 75.5
MsG0480019175.01.T01 MTR_4g050250 35.263 190 90 6 3 186 4 166 3.63e-18 87.0
MsG0480019175.01.T01 MTR_8g467800 33.714 175 76 6 4 176 7 143 5.76e-17 82.8
MsG0480019175.01.T01 MTR_8g467800 39.623 159 84 6 260 412 157 309 3.38e-16 80.5
MsG0480019175.01.T01 MTR_2g086020 39.815 108 54 3 403 508 217 315 2.60e-16 80.5
MsG0480019175.01.T01 MTR_8g467790 33.333 174 82 7 17 186 148 291 7.07e-16 80.5
MsG0480019175.01.T01 MTR_8g062080 31.953 169 88 6 357 508 287 445 4.70e-15 77.8
MsG0480019175.01.T01 MTR_8g062300 34.259 108 60 3 403 508 379 477 1.67e-11 66.6
MsG0480019175.01.T01 MTR_8g014180 41.975 81 24 1 1 81 1 58 2.42e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019175.01.T01 AT3G26920 25.306 245 160 4 276 507 66 300 2.74e-12 68.2

Find 102 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGGGTTCGTGTCGTCAT+TGG 0.303905 4:-15467227 MsG0480019175.01.T01:CDS
TTTCGATTCTCTTCGTAGTT+TGG 0.312180 4:+15468801 None:intergenic
ACCTTGTGAGTCTTTCTATA+CGG 0.326412 4:+15467366 None:intergenic
ATATCCAGAGCTTCGATGTT+TGG 0.343688 4:+15465786 None:intergenic
GTACTTCTTACCTTGGTCTA+AGG 0.348388 4:+15464788 None:intergenic
GCAAACATTGTCCGAGCTAT+TGG 0.353429 4:+15465752 None:intergenic
TGTTGAGGAGCTTGAGTAAT+GGG 0.353728 4:+15465532 None:intergenic
TGTGGAGCCCATCCTAAAAT+TGG 0.372406 4:+15464981 None:intergenic
TATCCAGAGCTTCGATGTTT+GGG 0.379480 4:+15465787 None:intergenic
AAACATCGCTGATATTGTAT+TGG 0.380047 4:+15465628 None:intergenic
GAACCCAACTGTCAACTAAA+CGG 0.381387 4:+15467240 None:intergenic
TAAATTGTTGTCGTTGATAA+GGG 0.382087 4:+15467268 None:intergenic
GTAAATTGTTGTCGTTGATA+AGG 0.393847 4:+15467267 None:intergenic
TATGATGACTCCTACTACTC+TGG 0.395709 4:-15467392 MsG0480019175.01.T01:CDS
TATACGGTTTCCAGAGTAGT+AGG 0.401845 4:+15467382 None:intergenic
GATTAAATTTATAGGTATAG+AGG 0.407879 4:-15466727 MsG0480019175.01.T01:intron
GTTGGGTTCGTGTCGTCATT+GGG 0.413997 4:-15467226 MsG0480019175.01.T01:CDS
AGGTCGAGTTCCTCGAGGTT+AGG 0.419454 4:+15467203 None:intergenic
TCTCGCCATGGCAACACCTT+TGG 0.421012 4:-15467445 MsG0480019175.01.T01:CDS
TCCGTGATCCCCGACGCATT+CGG 0.421065 4:-15467316 MsG0480019175.01.T01:CDS
GAAAATTGAAATAGAGAGTA+AGG 0.421437 4:-15465706 MsG0480019175.01.T01:CDS
AAGCATCTTCCGAATGCGTC+GGG 0.423504 4:+15467307 None:intergenic
TCCACCACTGTTGTTGCCAC+TGG 0.429732 4:-15467475 MsG0480019175.01.T01:CDS
AATTGACATCTTCGGTTATG+TGG 0.433299 4:-15465844 MsG0480019175.01.T01:CDS
TTGTGGGAAAGTTGAATCCT+TGG 0.449977 4:-15467036 MsG0480019175.01.T01:CDS
ATTCAATTTAAAAGATTTCG+AGG 0.454843 4:-15464918 MsG0480019175.01.T01:CDS
TGGTGGAGCCACGTGAGGAC+AGG 0.457173 4:+15467491 None:intergenic
AACCCAACTGTCAACTAAAC+GGG 0.458120 4:+15467241 None:intergenic
GCCTTCCACCTACCTTGAAA+AGG 0.465640 4:-15465731 MsG0480019175.01.T01:CDS
TGCCCGTTTAGTTGACAGTT+GGG 0.467083 4:-15467243 MsG0480019175.01.T01:CDS
ATGTGAATGTACTCAAGATC+TGG 0.469470 4:+15465654 None:intergenic
TGCCTGAGTGAAACGAGGTT+AGG 0.469573 4:+15467110 None:intergenic
GCCTGAGTGAAACGAGGTTA+GGG 0.472532 4:+15467111 None:intergenic
CTGCCCAAACATCGAAGCTC+TGG 0.473161 4:-15465790 MsG0480019175.01.T01:CDS
CGACACATTTCTGAGGCTCT+TGG 0.476594 4:+15464738 None:intergenic
TAAATTGAATAAAGGTAAGG+TGG 0.483200 4:+15464931 None:intergenic
AAATAGAGAGTAAGGAGGTC+GGG 0.502290 4:-15465698 MsG0480019175.01.T01:CDS
GGCGCATTTATTTCAAGCAA+AGG 0.507111 4:+15465675 None:intergenic
CGGTTATGTGGAAGTCCCTA+TGG 0.513714 4:-15465832 MsG0480019175.01.T01:CDS
AAACACAGTTGTAATTTGAA+AGG 0.518202 4:+15466698 None:intergenic
GTGCCCGTTTAGTTGACAGT+TGG 0.518293 4:-15467244 MsG0480019175.01.T01:CDS
CCATCGAGGTCATCATCATC+GGG 0.518886 4:+15467170 None:intergenic
GAATGTCGTACTTCTTACCT+TGG 0.521374 4:+15464781 None:intergenic
TCCGAATGCGTCGGGGATCA+CGG 0.522521 4:+15467315 None:intergenic
AAATTGAATAAAGGTAAGGT+GGG 0.524970 4:+15464932 None:intergenic
CAACCAGGATGTATGAGTAA+AGG 0.525414 4:+15466664 None:intergenic
GTAAATGACAAATGCTATTG+TGG 0.526608 4:-15467053 MsG0480019175.01.T01:CDS
CTCAGAGGAAGCTTGAAGTC+GGG 0.527584 4:+15467146 None:intergenic
CGAGGTTAGGGCAGGTGAAG+AGG 0.528533 4:+15467123 None:intergenic
TAAATGACAAATGCTATTGT+GGG 0.528650 4:-15467052 MsG0480019175.01.T01:CDS
TTGTTGAGGAGCTTGAGTAA+TGG 0.530004 4:+15465531 None:intergenic
AGCCACGTGAGGACAGGGTA+TGG 0.530425 4:+15467497 None:intergenic
GGTATGACAGGATGTGGTTG+AGG 0.530429 4:+15468740 None:intergenic
TCCATCGAGGTCATCATCAT+CGG 0.532979 4:+15467169 None:intergenic
CATAGAAGTGCATTCACCAT+AGG 0.537885 4:+15465816 None:intergenic
GCTCAGAGGAAGCTTGAAGT+CGG 0.541393 4:+15467145 None:intergenic
TTTCCTTTACTCATACATCC+TGG 0.541670 4:-15466667 MsG0480019175.01.T01:CDS
CTTTACTCATACATCCTGGT+TGG 0.542659 4:-15466663 MsG0480019175.01.T01:intron
CACTTAGGAGCACTAGGCTG+TGG 0.544015 4:+15464963 None:intergenic
ATGTGGTTGAGGACATCGTC+TGG 0.546232 4:+15468751 None:intergenic
GCTGATATTTCCTTAGACCA+AGG 0.552204 4:-15464798 MsG0480019175.01.T01:CDS
ATACTGCTAATTGACATCTT+CGG 0.557259 4:-15465852 MsG0480019175.01.T01:CDS
TTGTTCCACAGTCTTAGCAA+TGG 0.560703 4:-15465927 MsG0480019175.01.T01:intron
ATAGAAGTGCATTCACCATA+GGG 0.563821 4:+15465817 None:intergenic
GAGTGAAACGAGGTTAGGGC+AGG 0.567420 4:+15467115 None:intergenic
ACGAGACACTTAGGAGCACT+AGG 0.575659 4:+15464957 None:intergenic
AGGTGGGATACGAGACACTT+AGG 0.576697 4:+15464948 None:intergenic
GAAATAGAGAGTAAGGAGGT+CGG 0.580181 4:-15465699 MsG0480019175.01.T01:CDS
GTGAGGACAGGGTATGGCCA+TGG 0.583862 4:+15467503 None:intergenic
CCCGATGATGATGACCTCGA+TGG 0.587958 4:-15467170 MsG0480019175.01.T01:CDS
CATCATCGGGAAGAAGATTG+AGG 0.596444 4:+15467183 None:intergenic
AAACTACTGTTGCCCAGTGG+CGG 0.597020 4:-15468708 MsG0480019175.01.T01:CDS
GCCCTAACCTCGTTTCACTC+AGG 0.600162 4:-15467112 MsG0480019175.01.T01:CDS
GGCCATACCCTGTCCTCACG+TGG 0.601881 4:-15467499 MsG0480019175.01.T01:CDS
GGTGGAGCCACGTGAGGACA+GGG 0.603535 4:+15467492 None:intergenic
ATTAGCAGTATCTTCAGTGA+TGG 0.609190 4:+15465864 None:intergenic
TTTGAGTGATTCAACAACCA+AGG 0.609632 4:-15465484 MsG0480019175.01.T01:intron
TTGCTTTGGAGAGATTGTTG+AGG 0.611590 4:+15465517 None:intergenic
GAAGCATCTTCCGAATGCGT+CGG 0.613087 4:+15467306 None:intergenic
ATGGTGAATGCACTTCTATG+TGG 0.619187 4:-15465813 MsG0480019175.01.T01:CDS
GCCAGTGGCAACAACAGTGG+TGG 0.620662 4:+15467474 None:intergenic
GGGCAGGTGAAGAGGCTCAG+AGG 0.622109 4:+15467131 None:intergenic
AATTGAAATAGAGAGTAAGG+AGG 0.639456 4:-15465703 MsG0480019175.01.T01:CDS
CGTCATTGGGCCTAACCTCG+AGG 0.642330 4:-15467213 MsG0480019175.01.T01:CDS
AGCATCTTCCGAATGCGTCG+GGG 0.643354 4:+15467308 None:intergenic
AACAGTGGTGGAGCCACGTG+AGG 0.645064 4:+15467486 None:intergenic
TCGGAAGGTATGACAGGATG+TGG 0.646113 4:+15468734 None:intergenic
GCACATGGAGATGTTGCCAA+AGG 0.646802 4:+15467429 None:intergenic
ATTGGAGAGATAAGGAACCA+AGG 0.647567 4:+15467019 None:intergenic
ACTGGCAGTCTATCTCGCCA+TGG 0.647660 4:-15467457 MsG0480019175.01.T01:CDS
ATGGCGAGATAGACTGCCAG+TGG 0.660919 4:+15467459 None:intergenic
ACGAAGAAATCATACGACAA+AGG 0.672122 4:+15465555 None:intergenic
TGTTGCCAAAGGTGTTGCCA+TGG 0.672704 4:+15467440 None:intergenic
TGTAAGTCGACACATTTCTG+AGG 0.686844 4:+15464731 None:intergenic
GAAGCCTATCATTACCAACC+AGG 0.686923 4:+15466649 None:intergenic
GATTGAGGTCGAGTTCCTCG+AGG 0.689025 4:+15467198 None:intergenic
ACTGCCAGTGGCAACAACAG+TGG 0.700325 4:+15467471 None:intergenic
GCACGTGCCTGAGTGAAACG+AGG 0.723450 4:+15467105 None:intergenic
GCTTGAAGTCGGGTCCATCG+AGG 0.729685 4:+15467156 None:intergenic
ACCGTATAGAAAGACTCACA+AGG 0.735549 4:-15467367 MsG0480019175.01.T01:CDS
GAATGCGTCGGGGATCACGG+AGG 0.743204 4:+15467318 None:intergenic
TCAAAACTACTGTTGCCCAG+TGG 0.743782 4:-15468711 MsG0480019175.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCTTTTAAATTGAATAA+AGG + Chr4:15468619-15468638 None:intergenic 10.0%
!!! TAGTTTAAATTTTGAATTAT+TGG + Chr4:15464964-15464983 None:intergenic 10.0%
!!! TTATATTTAGTTTATTTTGA+TGG + Chr4:15464893-15464912 None:intergenic 10.0%
!!! TTGATTTTGATTAAATTTAT+AGG - Chr4:15466804-15466823 MsG0480019175.01.T01:intron 10.0%
!! TTATATCTATATAGATAGAT+AGG - Chr4:15468145-15468164 MsG0480019175.01.T01:intron 15.0%
!!! AATGAATTTGATATTTGTTT+TGG + Chr4:15465658-15465677 None:intergenic 15.0%
!!! AATTTTGAATTATTGGTTTT+TGG + Chr4:15464957-15464976 None:intergenic 15.0%
!!! TTTTAAATTGAATAAAGGTA+AGG + Chr4:15468614-15468633 None:intergenic 15.0%
!!! TTTTCAAAGTATTATGTAAT+TGG + Chr4:15467356-15467375 None:intergenic 15.0%
!! ACTAAAATAAAACTTAACCT+TGG + Chr4:15468075-15468094 None:intergenic 20.0%
!! ATGTGTATAATGTGATTATA+TGG + Chr4:15465243-15465262 None:intergenic 20.0%
!! ATTCAATTTAAAAGATTTCG+AGG - Chr4:15468621-15468640 MsG0480019175.01.T01:intron 20.0%
!! CAATATTAAAATTATGCCAA+GGG - Chr4:15465980-15465999 MsG0480019175.01.T01:intron 20.0%
!! GAAAAACTAGCAATAAAAAA+TGG + Chr4:15466462-15466481 None:intergenic 20.0%
!! GATTAAATTTATAGGTATAG+AGG - Chr4:15466812-15466831 MsG0480019175.01.T01:intron 20.0%
!! GGAATTAAGTAACTAATTAT+TGG + Chr4:15467335-15467354 None:intergenic 20.0%
!! TATAATCACATTATACACAT+TGG - Chr4:15465243-15465262 MsG0480019175.01.T01:intron 20.0%
!! TCCAAAGAAAAAAAAAAGAT+TGG + Chr4:15466541-15466560 None:intergenic 20.0%
!!! ATTTTAAGAACTTGAAGAAT+AGG + Chr4:15468334-15468353 None:intergenic 20.0%
!!! TACATTTAAAAGTGCATAAT+TGG + Chr4:15465381-15465400 None:intergenic 20.0%
!!! TATTTAGTTTATTTTGATGG+CGG + Chr4:15464890-15464909 None:intergenic 20.0%
!!! TCAAATCTATGAAACATTTT+TGG - Chr4:15467482-15467501 MsG0480019175.01.T01:CDS 20.0%
!!! TCCAATCTTTTTTTTTTCTT+TGG - Chr4:15466537-15466556 MsG0480019175.01.T01:intron 20.0%
!!! TGAAAATCATTTTTTGTTGA+AGG - Chr4:15468653-15468672 MsG0480019175.01.T01:intron 20.0%
! AAAAAAAGATTGGAGAGATA+AGG + Chr4:15466531-15466550 None:intergenic 25.0%
! AAACACAGTTGTAATTTGAA+AGG + Chr4:15466844-15466863 None:intergenic 25.0%
! AAATTGAATAAAGGTAAGGT+GGG + Chr4:15468610-15468629 None:intergenic 25.0%
! AACCCTAATCAAAACAAAAA+GGG + Chr4:15465613-15465632 None:intergenic 25.0%
! AACTTATTCTAAATCAGCAA+GGG - Chr4:15465029-15465048 MsG0480019175.01.T01:intron 25.0%
! AATCGAAAGATAAAAAAGAC+AGG - Chr4:15464753-15464772 MsG0480019175.01.T01:CDS 25.0%
! AGAAGAAGATAATTGTTGAA+TGG - Chr4:15467279-15467298 MsG0480019175.01.T01:CDS 25.0%
! ATACTGCTTAAATGCATAAT+TGG + Chr4:15465562-15465581 None:intergenic 25.0%
! ATATAATCAGTCCTTAATCA+AGG - Chr4:15465209-15465228 MsG0480019175.01.T01:intron 25.0%
! ATCCACTAAAAAAACTTTAG+AGG - Chr4:15467002-15467021 MsG0480019175.01.T01:CDS 25.0%
! ATTATTACTACTTGACAATG+TGG - Chr4:15468183-15468202 MsG0480019175.01.T01:intron 25.0%
! ATTCAAAAAAATCTAGCACA+TGG + Chr4:15466128-15466147 None:intergenic 25.0%
! ATTCTTGAAAAAGTAGATCA+CGG + Chr4:15468234-15468253 None:intergenic 25.0%
! GAAAATTGAAATAGAGAGTA+AGG - Chr4:15467833-15467852 MsG0480019175.01.T01:intron 25.0%
! GCAATATTAAAATTATGCCA+AGG - Chr4:15465979-15465998 MsG0480019175.01.T01:intron 25.0%
! TAAATGACAAATGCTATTGT+GGG - Chr4:15466487-15466506 MsG0480019175.01.T01:intron 25.0%
! TAAATTGAATAAAGGTAAGG+TGG + Chr4:15468611-15468630 None:intergenic 25.0%
! TAACCCTAATCAAAACAAAA+AGG + Chr4:15465614-15465633 None:intergenic 25.0%
! TAATCCTATGTATAAAACCT+TGG - Chr4:15467093-15467112 MsG0480019175.01.T01:CDS 25.0%
! TATTCTAAATCATCATCAAC+TGG - Chr4:15465000-15465019 MsG0480019175.01.T01:intron 25.0%
! TGGTATATAAACCTTGATTA+AGG + Chr4:15465223-15465242 None:intergenic 25.0%
!! ACATGATTAGTTCATTACTA+TGG - Chr4:15468489-15468508 MsG0480019175.01.T01:intron 25.0%
!! ATGTAAACTTTTACACACTA+AGG - Chr4:15467170-15467189 MsG0480019175.01.T01:CDS 25.0%
!! TAAATTGTTGTCGTTGATAA+GGG + Chr4:15466274-15466293 None:intergenic 25.0%
!! TAAATTTTCAACCAATAGCT+CGG - Chr4:15467776-15467795 MsG0480019175.01.T01:intron 25.0%
!! TGTAAACTTTTACACACTAA+GGG - Chr4:15467171-15467190 MsG0480019175.01.T01:CDS 25.0%
!! TTGGATTTTCAAAGGTTATA+TGG + Chr4:15465362-15465381 None:intergenic 25.0%
!!! ACACACTAAATCACTTTTTT+GGG - Chr4:15467455-15467474 MsG0480019175.01.T01:CDS 25.0%
!!! ATTCGTATTTTTTCTCAGAA+CGG + Chr4:15465928-15465947 None:intergenic 25.0%
!!! ATTTAGTTTATTTTGATGGC+GGG + Chr4:15464889-15464908 None:intergenic 25.0%
!!! CAATTTAGTTTTTGTTGCTA+GGG + Chr4:15467065-15467084 None:intergenic 25.0%
!!! TCAATTTAGTTTTTGTTGCT+AGG + Chr4:15467066-15467085 None:intergenic 25.0%
!!! TTTGTTTTGATTAGGGTTAT+TGG - Chr4:15465615-15465634 MsG0480019175.01.T01:CDS 25.0%
AAACATCGCTGATATTGTAT+TGG + Chr4:15467914-15467933 None:intergenic 30.0%
AATTGAAATAGAGAGTAAGG+AGG - Chr4:15467836-15467855 MsG0480019175.01.T01:intron 30.0%
ACCCTAAAACTGTTAAGAAA+CGG + Chr4:15465720-15465739 None:intergenic 30.0%
ACCCTAATCAAAACAAAAAG+GGG + Chr4:15465612-15465631 None:intergenic 30.0%
AGAAAAAATACGAATGAGAG+TGG - Chr4:15465933-15465952 MsG0480019175.01.T01:intron 30.0%
AGAATCACATACCTGATTAA+CGG - Chr4:15467124-15467143 MsG0480019175.01.T01:CDS 30.0%
AGTTCTTAAAATTCGAAACC+AGG - Chr4:15468342-15468361 MsG0480019175.01.T01:intron 30.0%
ATACTGCTAATTGACATCTT+CGG - Chr4:15467687-15467706 MsG0480019175.01.T01:intron 30.0%
CAACTTATTCTAAATCAGCA+AGG - Chr4:15465028-15465047 MsG0480019175.01.T01:intron 30.0%
GAAAAAATACGAATGAGAGT+GGG - Chr4:15465934-15465953 MsG0480019175.01.T01:intron 30.0%
GGTAATTTCGCAGAATTAAT+GGG - Chr4:15466009-15466028 MsG0480019175.01.T01:intron 30.0%
GTAAATGACAAATGCTATTG+TGG - Chr4:15466486-15466505 MsG0480019175.01.T01:intron 30.0%
GTAAATTGTTGTCGTTGATA+AGG + Chr4:15466275-15466294 None:intergenic 30.0%
TCATGCATAGTAATCACATT+AGG - Chr4:15465327-15465346 MsG0480019175.01.T01:intron 30.0%
TGATTTAGTGTGTCAATTGA+TGG + Chr4:15467448-15467467 None:intergenic 30.0%
TGGTAATTTCGCAGAATTAA+TGG - Chr4:15466008-15466027 MsG0480019175.01.T01:intron 30.0%
TTCTTGAAAAAGTAGATCAC+GGG + Chr4:15468233-15468252 None:intergenic 30.0%
TTGAGGAACTAATCTATTCA+TGG + Chr4:15465517-15465536 None:intergenic 30.0%
TTGATTGATTGCAAATGAGA+CGG - Chr4:15466683-15466702 MsG0480019175.01.T01:CDS 30.0%
TTGCTAATGTACTTACAGTT+CGG + Chr4:15465080-15465099 None:intergenic 30.0%
! ACCGTTTCTTAACAGTTTTA+GGG - Chr4:15465716-15465735 MsG0480019175.01.T01:CDS 30.0%
! CAAAACTAGATGTTTTGCTT+TGG + Chr4:15468039-15468058 None:intergenic 30.0%
! CTTTTACGAACTACTTATTC+TGG + Chr4:15466968-15466987 None:intergenic 30.0%
! GTGCATAATTGGATTTTCAA+AGG + Chr4:15465370-15465389 None:intergenic 30.0%
! GTTGAGTATGTTTTGCAAAA+AGG - Chr4:15468693-15468712 MsG0480019175.01.T01:intron 30.0%
! TACCGTTTCTTAACAGTTTT+AGG - Chr4:15465715-15465734 MsG0480019175.01.T01:CDS 30.0%
! TTCAATTTTCAGCCTTTTCA+AGG + Chr4:15467823-15467842 None:intergenic 30.0%
!! AAATTATGCCAAGGGTATTA+TGG - Chr4:15465988-15466007 MsG0480019175.01.T01:intron 30.0%
!! ACTTTATGTCATAGCTTTGA+CGG + Chr4:15466729-15466748 None:intergenic 30.0%
!! AGCTAGCTTTAGAATATTCA+CGG + Chr4:15465440-15465459 None:intergenic 30.0%
!! ATAGCCAAGGTTTTATACAT+AGG + Chr4:15467100-15467119 None:intergenic 30.0%
!! GAACTACTTATTCTGGAATT+TGG + Chr4:15466961-15466980 None:intergenic 30.0%
!! TAGCTAGCTTTAGAATATTG+AGG + Chr4:15465485-15465504 None:intergenic 30.0%
!!! AGCCTCTAAAGTTTTTTTAG+TGG + Chr4:15467007-15467026 None:intergenic 30.0%
!!! ATCCCCTTTTTGTTTTGATT+AGG - Chr4:15465607-15465626 MsG0480019175.01.T01:CDS 30.0%
!!! GACACACTAAATCACTTTTT+TGG - Chr4:15467454-15467473 MsG0480019175.01.T01:CDS 30.0%
!!! TCCCCTTTTTGTTTTGATTA+GGG - Chr4:15465608-15465627 MsG0480019175.01.T01:CDS 30.0%
!!! TTCGTATTTTTTCTCAGAAC+GGG + Chr4:15465927-15465946 None:intergenic 30.0%
AAAATACAGTTAGGGACGAA+CGG - Chr4:15466627-15466646 MsG0480019175.01.T01:intron 35.0%
AATTGACATCTTCGGTTATG+TGG - Chr4:15467695-15467714 MsG0480019175.01.T01:intron 35.0%
ACCTTGTGAGTCTTTCTATA+CGG + Chr4:15466176-15466195 None:intergenic 35.0%
ACGAAGAAATCATACGACAA+AGG + Chr4:15467987-15468006 None:intergenic 35.0%
ACTACACGACATGAACATAT+TGG + Chr4:15467511-15467530 None:intergenic 35.0%
AGAGAATTGGAGTTAAACCA+GGG + Chr4:15468289-15468308 None:intergenic 35.0%
ATGTGAATGTACTCAAGATC+TGG + Chr4:15467888-15467907 None:intergenic 35.0%
ATTAGCAGTATCTTCAGTGA+TGG + Chr4:15467678-15467697 None:intergenic 35.0%
CGAAATTACCATAATACCCT+TGG + Chr4:15465999-15466018 None:intergenic 35.0%
CTTTGATTAAACAAACCTCC+TGG + Chr4:15468363-15468382 None:intergenic 35.0%
GGAACTAATCTATTCATGGT+TGG + Chr4:15465513-15465532 None:intergenic 35.0%
TAAATCATCATCAACTGGAC+AGG - Chr4:15465005-15465024 MsG0480019175.01.T01:intron 35.0%
TAATGTACTTACAGTTCGGA+TGG + Chr4:15465076-15465095 None:intergenic 35.0%
TCTGTGTCATGACAAACAAT+AGG - Chr4:15466916-15466935 MsG0480019175.01.T01:intron 35.0%
TCTTAAAATTCGAAACCAGG+AGG - Chr4:15468345-15468364 MsG0480019175.01.T01:intron 35.0%
TCTTGAAAAAGTAGATCACG+GGG + Chr4:15468232-15468251 None:intergenic 35.0%
TGTGATTCTATGTATAGCCA+AGG + Chr4:15467113-15467132 None:intergenic 35.0%
TTACACACTAAGGGTCTTAA+GGG - Chr4:15467180-15467199 MsG0480019175.01.T01:CDS 35.0%
TTACTACTTGACAATGTGGA+CGG - Chr4:15468187-15468206 MsG0480019175.01.T01:intron 35.0%
TTCACGGTTGGAATTAAATC+TGG + Chr4:15465424-15465443 None:intergenic 35.0%
TTCGTAAAAGATGTCTTGCA+GGG - Chr4:15466978-15466997 MsG0480019175.01.T01:CDS 35.0%
TTTACACACTAAGGGTCTTA+AGG - Chr4:15467179-15467198 MsG0480019175.01.T01:CDS 35.0%
TTTATACCTGTAAGTCACAC+TGG - Chr4:15466590-15466609 MsG0480019175.01.T01:intron 35.0%
TTTCCTTTACTCATACATCC+TGG - Chr4:15466872-15466891 MsG0480019175.01.T01:intron 35.0%
TTTCGATTCTCTTCGTAGTT+TGG + Chr4:15464741-15464760 None:intergenic 35.0%
TTTGAGTGATTCAACAACCA+AGG - Chr4:15468055-15468074 MsG0480019175.01.T01:intron 35.0%
! ATAGAAGTGCATTCACCATA+GGG + Chr4:15467725-15467744 None:intergenic 35.0%
! ATTTCGCAGAATTAATGGGT+AGG - Chr4:15466013-15466032 MsG0480019175.01.T01:intron 35.0%
! TGAGGGAATCAAAAGTCTTT+TGG - Chr4:15467210-15467229 MsG0480019175.01.T01:CDS 35.0%
! TGTGTCAATTGATGGCATAT+TGG + Chr4:15467440-15467459 None:intergenic 35.0%
!! AAGACACACCAATTTTAGGA+TGG - Chr4:15468550-15468569 MsG0480019175.01.T01:intron 35.0%
!! AGCTTTAGAATATTCACGGT+TGG + Chr4:15465436-15465455 None:intergenic 35.0%
!! ATTTTCAGCCTTTTCAAGGT+AGG + Chr4:15467819-15467838 None:intergenic 35.0%
!! CTTTATGTCATAGCTTTGAC+GGG + Chr4:15466728-15466747 None:intergenic 35.0%
!! GAGCTAGCTTTAGATTATTG+AGG + Chr4:15465534-15465553 None:intergenic 35.0%
!!! AGACACACCAATTTTAGGAT+GGG - Chr4:15468551-15468570 MsG0480019175.01.T01:intron 35.0%
AAATAGAGAGTAAGGAGGTC+GGG - Chr4:15467841-15467860 MsG0480019175.01.T01:intron 40.0%
AAATTGGTGTGTCTTCCTGT+AGG + Chr4:15468545-15468564 None:intergenic 40.0%
AACCCAACTGTCAACTAAAC+GGG + Chr4:15466301-15466320 None:intergenic 40.0%
ACCGTATAGAAAGACTCACA+AGG - Chr4:15466172-15466191 MsG0480019175.01.T01:intron 40.0%
AGATTCTCTAGCCGTTAATC+AGG + Chr4:15467138-15467157 None:intergenic 40.0%
ATACAACCAGTGTGACTTAC+AGG + Chr4:15466599-15466618 None:intergenic 40.0%
ATATCCAGAGCTTCGATGTT+TGG + Chr4:15467756-15467775 None:intergenic 40.0%
ATGGTGAATGCACTTCTATG+TGG - Chr4:15467726-15467745 MsG0480019175.01.T01:intron 40.0%
ATTGGAGAGATAAGGAACCA+AGG + Chr4:15466523-15466542 None:intergenic 40.0%
ATTGTCGAACACCAATGTCT+CGG - Chr4:15467411-15467430 MsG0480019175.01.T01:CDS 40.0%
ATTTAGATCTCACTCTTCCC+TGG - Chr4:15468269-15468288 MsG0480019175.01.T01:intron 40.0%
CAACCAGGATGTATGAGTAA+AGG + Chr4:15466878-15466897 None:intergenic 40.0%
CTTTACTCATACATCCTGGT+TGG - Chr4:15466876-15466895 MsG0480019175.01.T01:intron 40.0%
GAAATAGAGAGTAAGGAGGT+CGG - Chr4:15467840-15467859 MsG0480019175.01.T01:intron 40.0%
GAACCCAACTGTCAACTAAA+CGG + Chr4:15466302-15466321 None:intergenic 40.0%
GAATGTCGTACTTCTTACCT+TGG + Chr4:15468761-15468780 None:intergenic 40.0%
GAATTCCATTGCTAAGACTG+TGG + Chr4:15467620-15467639 None:intergenic 40.0%
GACAGGGGAAAATACAGTTA+GGG - Chr4:15466619-15466638 MsG0480019175.01.T01:intron 40.0%
GAGAGAATTGGAGTTAAACC+AGG + Chr4:15468290-15468309 None:intergenic 40.0%
GAGCCAGACAAAAAAGTTTG+GGG - Chr4:15464853-15464872 MsG0480019175.01.T01:CDS 40.0%
GCAACCTGCATTTGGAAAAT+GGG + Chr4:15465157-15465176 None:intergenic 40.0%
GCTGATATTTCCTTAGACCA+AGG - Chr4:15468741-15468760 MsG0480019175.01.T01:CDS 40.0%
GGAAGTAGAATATGCTACAG+AGG - Chr4:15467231-15467250 MsG0480019175.01.T01:CDS 40.0%
GGAGCCAGACAAAAAAGTTT+GGG - Chr4:15464852-15464871 MsG0480019175.01.T01:CDS 40.0%
GGCGCATTTATTTCAAGCAA+AGG + Chr4:15467867-15467886 None:intergenic 40.0%
GTACTTCTTACCTTGGTCTA+AGG + Chr4:15468754-15468773 None:intergenic 40.0%
GTCTTAAGGGAGACAAATGA+GGG - Chr4:15467193-15467212 MsG0480019175.01.T01:CDS 40.0%
GTTCGTAAAAGATGTCTTGC+AGG - Chr4:15466977-15466996 MsG0480019175.01.T01:CDS 40.0%
TATACGGTTTCCAGAGTAGT+AGG + Chr4:15466160-15466179 None:intergenic 40.0%
TATCCAGAGCTTCGATGTTT+GGG + Chr4:15467755-15467774 None:intergenic 40.0%
TATGATGACTCCTACTACTC+TGG - Chr4:15466147-15466166 MsG0480019175.01.T01:intron 40.0%
TGACAGGGGAAAATACAGTT+AGG - Chr4:15466618-15466637 MsG0480019175.01.T01:intron 40.0%
TGCAACCTGCATTTGGAAAA+TGG + Chr4:15465158-15465177 None:intergenic 40.0%
TGTAAGTCGACACATTTCTG+AGG + Chr4:15468811-15468830 None:intergenic 40.0%
TGTTGAGGAGCTTGAGTAAT+GGG + Chr4:15468010-15468029 None:intergenic 40.0%
TTGATTGCAAATGAGACGGT+AGG - Chr4:15466687-15466706 MsG0480019175.01.T01:CDS 40.0%
TTGTGGGAAAGTTGAATCCT+TGG - Chr4:15466503-15466522 MsG0480019175.01.T01:intron 40.0%
TTGTTCCACAGTCTTAGCAA+TGG - Chr4:15467612-15467631 MsG0480019175.01.T01:intron 40.0%
TTGTTGAGGAGCTTGAGTAA+TGG + Chr4:15468011-15468030 None:intergenic 40.0%
! CAAATCCTTTTGTTGCCTAC+AGG - Chr4:15468527-15468546 MsG0480019175.01.T01:intron 40.0%
! CAGGAAGACACACCAATTTT+AGG - Chr4:15468546-15468565 MsG0480019175.01.T01:intron 40.0%
! CATAGAAGTGCATTCACCAT+AGG + Chr4:15467726-15467745 None:intergenic 40.0%
! GAATCCCATTTTCCAAATGC+AGG - Chr4:15465150-15465169 MsG0480019175.01.T01:intron 40.0%
! GCACTGATACGTAAGATTCA+AGG + Chr4:15467557-15467576 None:intergenic 40.0%
!! ACATCCTGGTTGGTAATGAT+AGG - Chr4:15466886-15466905 MsG0480019175.01.T01:intron 40.0%
!! TTGCTTTGGAGAGATTGTTG+AGG + Chr4:15468025-15468044 None:intergenic 40.0%
!! TTTTGATCGGAAGGTATGAC+AGG + Chr4:15464814-15464833 None:intergenic 40.0%
!!! AGTTTATTTTGATGGCGGGA+TGG + Chr4:15464885-15464904 None:intergenic 40.0%
!!! CAACAGTAGTTTTGATCGGA+AGG + Chr4:15464823-15464842 None:intergenic 40.0%
!!! TGGGCAACAGTAGTTTTGAT+CGG + Chr4:15464827-15464846 None:intergenic 40.0%
AAGCAAGCTGAGGAGAGAAT+TGG + Chr4:15468302-15468321 None:intergenic 45.0%
AATGCAGGTTGCATCATCAC+TGG - Chr4:15465165-15465184 MsG0480019175.01.T01:intron 45.0%
ATGCAGGTTGCATCATCACT+GGG - Chr4:15465166-15465185 MsG0480019175.01.T01:intron 45.0%
CATATTGGACACCGAGACAT+TGG + Chr4:15467425-15467444 None:intergenic 45.0%
CATCATCGGGAAGAAGATTG+AGG + Chr4:15466359-15466378 None:intergenic 45.0%
CCAGACAAAAAAGTTTGGGG+TGG - Chr4:15464856-15464875 MsG0480019175.01.T01:CDS 45.0%
CGGAGCCAGACAAAAAAGTT+TGG - Chr4:15464851-15464870 MsG0480019175.01.T01:CDS 45.0%
GAAGCCTATCATTACCAACC+AGG + Chr4:15466893-15466912 None:intergenic 45.0%
GCAAACATTGTCCGAGCTAT+TGG + Chr4:15467790-15467809 None:intergenic 45.0%
GGTCTTAAGGGAGACAAATG+AGG - Chr4:15467192-15467211 MsG0480019175.01.T01:CDS 45.0%
GTCTTCCTGTAGGCAACAAA+AGG + Chr4:15468535-15468554 None:intergenic 45.0%
GTTCATGTCGTGTAGTTGTC+TGG - Chr4:15467515-15467534 MsG0480019175.01.T01:intron 45.0%
TCAAAACTACTGTTGCCCAG+TGG - Chr4:15464828-15464847 MsG0480019175.01.T01:CDS 45.0%
TCCATCGAGGTCATCATCAT+CGG + Chr4:15466373-15466392 None:intergenic 45.0%
TGCCCGTTTAGTTGACAGTT+GGG - Chr4:15466296-15466315 MsG0480019175.01.T01:intron 45.0%
TGTGGAGCCCATCCTAAAAT+TGG + Chr4:15468561-15468580 None:intergenic 45.0%
! AGTCACACTGGTTGTATGAC+AGG - Chr4:15466602-15466621 MsG0480019175.01.T01:intron 45.0%
! CAGAATTAATGGGTAGGCCA+TGG - Chr4:15466019-15466038 MsG0480019175.01.T01:intron 45.0%
! GTCACACTGGTTGTATGACA+GGG - Chr4:15466603-15466622 MsG0480019175.01.T01:intron 45.0%
! GTGATGATGCAACCTGCATT+TGG + Chr4:15465165-15465184 None:intergenic 45.0%
! TCACACTGGTTGTATGACAG+GGG - Chr4:15466604-15466623 MsG0480019175.01.T01:intron 45.0%
!! TTCAGCCTTTTCAAGGTAGG+TGG + Chr4:15467816-15467835 None:intergenic 45.0%
!!! CCACCCCAAACTTTTTTGTC+TGG + Chr4:15464859-15464878 None:intergenic 45.0%
!!! TTATTTTGATGGCGGGATGG+CGG + Chr4:15464882-15464901 None:intergenic 45.0%
AAACTACTGTTGCCCAGTGG+CGG - Chr4:15464831-15464850 MsG0480019175.01.T01:CDS 50.0%
AAGCATCTTCCGAATGCGTC+GGG + Chr4:15466235-15466254 None:intergenic 50.0%
ACGAATGAGAGTGGGAGAGT+GGG - Chr4:15465942-15465961 MsG0480019175.01.T01:intron 50.0%
AGGGTAGTTGAGCAGACAGT+AGG - Chr4:15465048-15465067 MsG0480019175.01.T01:intron 50.0%
AGGTGGGATACGAGACACTT+AGG + Chr4:15468594-15468613 None:intergenic 50.0%
AGTTGGGTTCGTGTCGTCAT+TGG - Chr4:15466312-15466331 MsG0480019175.01.T01:intron 50.0%
ATGTGGTTGAGGACATCGTC+TGG + Chr4:15464791-15464810 None:intergenic 50.0%
CCATCGAGGTCATCATCATC+GGG + Chr4:15466372-15466391 None:intergenic 50.0%
CGGTTATGTGGAAGTCCCTA+TGG - Chr4:15467707-15467726 MsG0480019175.01.T01:intron 50.0%
CTCAGAGGAAGCTTGAAGTC+GGG + Chr4:15466396-15466415 None:intergenic 50.0%
GACACTTGTGAAGCAAGCTG+AGG + Chr4:15468312-15468331 None:intergenic 50.0%
GAGTTCGAAGGAGAGTTCGT+CGG - Chr4:15465809-15465828 MsG0480019175.01.T01:CDS 50.0%
GATGGAGGCTATGAGTTCGA+AGG - Chr4:15465797-15465816 MsG0480019175.01.T01:CDS 50.0%
GCACATGGAGATGTTGCCAA+AGG + Chr4:15466113-15466132 None:intergenic 50.0%
GCCTGAGTGAAACGAGGTTA+GGG + Chr4:15466431-15466450 None:intergenic 50.0%
GCCTTCCACCTACCTTGAAA+AGG - Chr4:15467808-15467827 MsG0480019175.01.T01:intron 50.0%
GCTCAGAGGAAGCTTGAAGT+CGG + Chr4:15466397-15466416 None:intergenic 50.0%
GGTATGACAGGATGTGGTTG+AGG + Chr4:15464802-15464821 None:intergenic 50.0%
GTGCCCGTTTAGTTGACAGT+TGG - Chr4:15466295-15466314 MsG0480019175.01.T01:intron 50.0%
GTTGGGTTCGTGTCGTCATT+GGG - Chr4:15466313-15466332 MsG0480019175.01.T01:intron 50.0%
TACGAATGAGAGTGGGAGAG+TGG - Chr4:15465941-15465960 MsG0480019175.01.T01:intron 50.0%
TGCAGGTTGCATCATCACTG+GGG - Chr4:15465167-15465186 MsG0480019175.01.T01:intron 50.0%
TGCCTGAGTGAAACGAGGTT+AGG + Chr4:15466432-15466451 None:intergenic 50.0%
TTAGAGATCGATGCTGCGAG+AGG - Chr4:15465773-15465792 MsG0480019175.01.T01:CDS 50.0%
! GAAGCATCTTCCGAATGCGT+CGG + Chr4:15466236-15466255 None:intergenic 50.0%
! TCGGAAGGTATGACAGGATG+TGG + Chr4:15464808-15464827 None:intergenic 50.0%
!! ACGAGACACTTAGGAGCACT+AGG + Chr4:15468585-15468604 None:intergenic 50.0%
!! CGACACATTTCTGAGGCTCT+TGG + Chr4:15468804-15468823 None:intergenic 50.0%
!! GCCTTTTCAAGGTAGGTGGA+AGG + Chr4:15467812-15467831 None:intergenic 50.0%
!! TGTTGCCAAAGGTGTTGCCA+TGG + Chr4:15466102-15466121 None:intergenic 50.0%
ACTGCCAGTGGCAACAACAG+TGG + Chr4:15466071-15466090 None:intergenic 55.0%
ACTGGCAGTCTATCTCGCCA+TGG - Chr4:15466082-15466101 MsG0480019175.01.T01:intron 55.0%
AGCATCTTCCGAATGCGTCG+GGG + Chr4:15466234-15466253 None:intergenic 55.0%
AGGTCGAGTTCCTCGAGGTT+AGG + Chr4:15466339-15466358 None:intergenic 55.0%
ATCCTCACCCAGTCACCTAC+CGG + Chr4:15465875-15465894 None:intergenic 55.0%
ATCGATGCTGCGAGAGGAGA+TGG - Chr4:15465779-15465798 MsG0480019175.01.T01:CDS 55.0%
ATGGCGAGATAGACTGCCAG+TGG + Chr4:15466083-15466102 None:intergenic 55.0%
CTGCCCAAACATCGAAGCTC+TGG - Chr4:15467749-15467768 MsG0480019175.01.T01:intron 55.0%
GAGTGAAACGAGGTTAGGGC+AGG + Chr4:15466427-15466446 None:intergenic 55.0%
GATTGAGGTCGAGTTCCTCG+AGG + Chr4:15466344-15466363 None:intergenic 55.0%
GCCCTAACCTCGTTTCACTC+AGG - Chr4:15466427-15466446 MsG0480019175.01.T01:intron 55.0%
TAGGTGACTGGGTGAGGATG+AGG - Chr4:15465876-15465895 MsG0480019175.01.T01:CDS 55.0%
TCCACCACTGTTGTTGCCAC+TGG - Chr4:15466064-15466083 MsG0480019175.01.T01:intron 55.0%
TCTCGCCATGGCAACACCTT+TGG - Chr4:15466094-15466113 MsG0480019175.01.T01:intron 55.0%
TGAAGGTGAGTGATTGCCGC+CGG - Chr4:15465853-15465872 MsG0480019175.01.T01:CDS 55.0%
! CCCGATGATGATGACCTCGA+TGG - Chr4:15466369-15466388 MsG0480019175.01.T01:intron 55.0%
! GGCTGATTGCTGGTGGATGA+AGG - Chr4:15465836-15465855 MsG0480019175.01.T01:CDS 55.0%
!! CACTTAGGAGCACTAGGCTG+TGG + Chr4:15468579-15468598 None:intergenic 55.0%
!! TTTTGTCTGGCTCCGCCACT+GGG + Chr4:15464846-15464865 None:intergenic 55.0%
!! TTTTTGTCTGGCTCCGCCAC+TGG + Chr4:15464847-15464866 None:intergenic 55.0%
AGAGTGGGAGAGTGGGAGAG+TGG - Chr4:15465949-15465968 MsG0480019175.01.T01:intron 60.0%
AGCCACGTGAGGACAGGGTA+TGG + Chr4:15466045-15466064 None:intergenic 60.0%
ATTGCCGCCGGTAGGTGACT+GGG - Chr4:15465865-15465884 MsG0480019175.01.T01:CDS 60.0%
CGAGGTTAGGGCAGGTGAAG+AGG + Chr4:15466419-15466438 None:intergenic 60.0%
CGTCATTGGGCCTAACCTCG+AGG - Chr4:15466326-15466345 MsG0480019175.01.T01:intron 60.0%
GAAGGAGAGTTCGTCGGTCG+CGG - Chr4:15465815-15465834 MsG0480019175.01.T01:CDS 60.0%
GATGCTGCGAGAGGAGATGG+AGG - Chr4:15465782-15465801 MsG0480019175.01.T01:CDS 60.0%
GCACGTGCCTGAGTGAAACG+AGG + Chr4:15466437-15466456 None:intergenic 60.0%
GCCAGTGGCAACAACAGTGG+TGG + Chr4:15466068-15466087 None:intergenic 60.0%
GCTTGAAGTCGGGTCCATCG+AGG + Chr4:15466386-15466405 None:intergenic 60.0%
GTGAGGACAGGGTATGGCCA+TGG + Chr4:15466039-15466058 None:intergenic 60.0%
GTGGACGGACAGTAGCTGCT+TGG - Chr4:15468202-15468221 MsG0480019175.01.T01:intron 60.0%
TCCGAATGCGTCGGGGATCA+CGG + Chr4:15466227-15466246 None:intergenic 60.0%
TCCGTGATCCCCGACGCATT+CGG - Chr4:15466223-15466242 MsG0480019175.01.T01:intron 60.0%
! AACAGTGGTGGAGCCACGTG+AGG + Chr4:15466056-15466075 None:intergenic 60.0%
CTCACCCAGTCACCTACCGG+CGG + Chr4:15465872-15465891 None:intergenic 65.0%
GAATGCGTCGGGGATCACGG+AGG + Chr4:15466224-15466243 None:intergenic 65.0%
GATTGCCGCCGGTAGGTGAC+TGG - Chr4:15465864-15465883 MsG0480019175.01.T01:CDS 65.0%
GGCCATACCCTGTCCTCACG+TGG - Chr4:15466040-15466059 MsG0480019175.01.T01:intron 65.0%
GGGCAGGTGAAGAGGCTCAG+AGG + Chr4:15466411-15466430 None:intergenic 65.0%
GGTGAGTGATTGCCGCCGGT+AGG - Chr4:15465857-15465876 MsG0480019175.01.T01:CDS 65.0%
GGTGGAGCCACGTGAGGACA+GGG + Chr4:15466050-15466069 None:intergenic 65.0%
TGGTGGAGCCACGTGAGGAC+AGG + Chr4:15466051-15466070 None:intergenic 65.0%
CGCCGGTAGGTGACTGGGTG+AGG - Chr4:15465870-15465889 MsG0480019175.01.T01:CDS 70.0%
CGGTCGCGGCTGATTGCTGG+TGG - Chr4:15465829-15465848 MsG0480019175.01.T01:CDS 70.0%
CGTCGGTCGCGGCTGATTGC+TGG - Chr4:15465826-15465845 MsG0480019175.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 15464722 15468839 15464722 ID=MsG0480019175.01;Name=MsG0480019175.01
Chr4 mRNA 15464722 15468839 15464722 ID=MsG0480019175.01.T01;Parent=MsG0480019175.01;Name=MsG0480019175.01.T01;_AED=0.25;_eAED=0.25;_QI=0|0|0|0.8|0.75|0.6|5|0|508
Chr4 exon 15468694 15468839 15468694 ID=MsG0480019175.01.T01:exon:4168;Parent=MsG0480019175.01.T01
Chr4 exon 15466963 15467526 15466963 ID=MsG0480019175.01.T01:exon:4167;Parent=MsG0480019175.01.T01
Chr4 exon 15466664 15466735 15466664 ID=MsG0480019175.01.T01:exon:4166;Parent=MsG0480019175.01.T01
Chr4 exon 15465485 15465938 15465485 ID=MsG0480019175.01.T01:exon:4165;Parent=MsG0480019175.01.T01
Chr4 exon 15464722 15465012 15464722 ID=MsG0480019175.01.T01:exon:4164;Parent=MsG0480019175.01.T01
Chr4 CDS 15468694 15468839 15468694 ID=MsG0480019175.01.T01:cds;Parent=MsG0480019175.01.T01
Chr4 CDS 15466963 15467526 15466963 ID=MsG0480019175.01.T01:cds;Parent=MsG0480019175.01.T01
Chr4 CDS 15466664 15466735 15466664 ID=MsG0480019175.01.T01:cds;Parent=MsG0480019175.01.T01
Chr4 CDS 15465485 15465938 15465485 ID=MsG0480019175.01.T01:cds;Parent=MsG0480019175.01.T01
Chr4 CDS 15464722 15465012 15464722 ID=MsG0480019175.01.T01:cds;Parent=MsG0480019175.01.T01
Gene Sequence

>MsG0480019175.01.T01

ATGGCAGAGTTGAACTCCAAACTACGAAGAGAATCGAAAGATAAAAAAGACAGGATCAGTAGTTTACCAGACGATGTCCTCAACCACATCCTGTCATACCTTCCGATCAAAACTACTGTTGCCCAGTGGCGGAGCCAGACAAAAAAGCCATGGCCATACCCTGTCCTCACGTGGCTCCACCACTGTTGTTGCCACTGGCAGTCTATCTCGCCATGGCAACACCTTTGGCAACATCTCCATGTGCTAGATTTTTTTGAATATGATGACTCCTACTACTCTGGAAACCGTATAGAAAGACTCACAAGGTTCGTTGTTTTTGTGAATAATGTGCTCCTCCGTGATCCCCGACGCATTCGGAAGATGCTTCTTAACTGTCATCACTCCCTTATCAACGACAACAATTTACGTGCCCGTTTAGTTGACAGTTGGGTTCGTGTCGTCATTGGGCCTAACCTCGAGGAACTCGACCTCAATCTTCTTCCCGATGATGATGACCTCGATGGACCCGACTTCAAGCTTCCTCTGAGCCTCTTCACCTGCCCTAACCTCGTTTCACTCAGGCACGTGCTTCCATTTTTTATTGCTAGTTTTTCTTTTGTAAATGACAAATGCTATTGTGGGAAAGTTGAATCCTTGGTTCCTTATCTCTCCAATCTTTTTTTTTTCTTTGGATTTTTTGAATCACTAACACACAATACTTATTTATACCTGTATAGAGGTTTGTGCCTTTCAAATTACAACTGTGTTTTAGAAGAATTTCCTTTACTCATACATCCTGGTTGTCTTAGCAATGGAATTCATCTAAACATACAAAGCTCTACGACAATATGTTTACCATCACTGAAGATACTGCTAATTGACATCTTCGGTTATGTGGAAGTCCCTATGGTGAATGCACTTCTATGTGGCTGCCCAAACATCGAAGCTCTGGATATTAAATTTTCAACCAATAGCTCGGACAATGTTTGCCTTCCACCTACCTTGAAAAGGCTGAAAATTGAAATAGAGAGTAAGGAGGTCGGGCCTTTGCTTGAAATAAATGCGCCAGATCTTGAGTACATTCACATTTACCAATACAATATCAGCGATGTTTTAAACATGAAAAACTTGCACAATGTTGTAGAAGCAAGTCTTGATCTCGTGCCTTTGTCGTATGATTTCTTCGTCCCATTACTCAAGCTCCTCAACAATCTCTCCAAAGCAAAACATCTAGTTTTGAGTGATTCAACAACCAAGGAAGACACACCAATTTTAGGATGGGCTCCACAGCCTAGTGCTCCTAAGTGTCTCGTATCCCACCTTACCTTTATTCAATTTAAAAGATTTCGAGGATTTTCAGATGAAAATCATTTTTTGTTGAAGGAAGATGAAATATCATTTGTTGAGTATGTTTTGCAAAAAGGACTTGTTTTAAAGACAGTGATTATTGCTGATATTTCCTTAGACCAAGGTAAGAAGTACGACATTCTAAAAAGACTATCGAATGTGCCAAGAGCCTCAGAAATGTGTCGACTTACATTTGACTGA
Protein sequence

>MsG0480019175.01.T01

MAELNSKLRRESKDKKDRISSLPDDVLNHILSYLPIKTTVAQWRSQTKKPWPYPVLTWLHHCCCHWQSISPWQHLWQHLHVLDFFEYDDSYYSGNRIERLTRFVVFVNNVLLRDPRRIRKMLLNCHHSLINDNNLRARLVDSWVRVVIGPNLEELDLNLLPDDDDLDGPDFKLPLSLFTCPNLVSLRHVLPFFIASFSFVNDKCYCGKVESLVPYLSNLFFFFGFFESLTHNTYLYLYRGLCLSNYNCVLEEFPLLIHPGCLSNGIHLNIQSSTTICLPSLKILLIDIFGYVEVPMVNALLCGCPNIEALDIKFSTNSSDNVCLPPTLKRLKIEIESKEVGPLLEINAPDLEYIHIYQYNISDVLNMKNLHNVVEASLDLVPLSYDFFVPLLKLLNNLSKAKHLVLSDSTTKEDTPILGWAPQPSAPKCLVSHLTFIQFKRFRGFSDENHFLLKEDEISFVEYVLQKGLVLKTVIIADISLDQGKKYDILKRLSNVPRASEMCRLTFD*