AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006385.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006385.01.T01 MTR_2g007400 86.914 405 50 2 1 402 1 405 0.0 719
MsG0280006385.01.T01 MTR_2g007360 61.111 414 109 8 1 401 1 375 1.26e-166 472
MsG0280006385.01.T01 MTR_2g005990 59.542 393 156 2 10 400 4 395 3.00e-152 436
MsG0280006385.01.T01 MTR_3g099830 56.188 404 143 5 1 400 1 374 1.77e-144 416
MsG0280006385.01.T01 MTR_2g008320 52.985 402 168 6 4 401 44 428 2.88e-127 374
MsG0280006385.01.T01 MTR_2g008310 52.750 400 152 6 11 401 1 372 7.56e-124 364
MsG0280006385.01.T01 MTR_1g107385 48.379 401 196 8 7 400 27 423 5.45e-112 335
MsG0280006385.01.T01 MTR_5g083890 48.148 405 187 9 12 399 6 404 1.28e-106 324
MsG0280006385.01.T01 MTR_7g007340 49.373 399 149 11 1 394 1 351 1.42e-105 316
MsG0280006385.01.T01 MTR_2g007450 43.868 424 194 12 7 400 11 420 1.78e-105 318
MsG0280006385.01.T01 MTR_7g075820 44.862 399 200 7 12 400 6 394 2.01e-105 317
MsG0280006385.01.T01 MTR_1g053025 46.135 401 193 8 11 400 1 389 2.97e-98 298
MsG0280006385.01.T01 MTR_3g107100 42.402 408 194 11 12 399 11 397 3.66e-88 273
MsG0280006385.01.T01 MTR_2g007090 59.426 244 74 4 159 400 74 294 2.39e-80 249
MsG0280006385.01.T01 MTR_2g007090 59.091 66 25 1 1 66 1 64 2.53e-14 73.6
MsG0280006385.01.T01 MTR_3g107160 38.861 404 221 13 6 402 1 385 5.49e-79 249
MsG0280006385.01.T01 MTR_3g107120 39.901 406 206 11 8 397 5 388 7.51e-79 249
MsG0280006385.01.T01 MTR_3g026920 38.353 425 196 13 7 399 14 404 3.75e-73 234
MsG0280006385.01.T01 MTR_6g029350 58.937 207 73 5 195 399 1 197 9.54e-72 225
MsG0280006385.01.T01 MTR_7g007370 42.308 390 141 11 11 392 16 329 1.08e-70 226
MsG0280006385.01.T01 MTR_7g083740 36.683 398 206 9 4 397 9 364 1.22e-66 216
MsG0280006385.01.T01 MTR_2g007500 39.674 368 160 11 1 344 1 330 3.85e-65 211
MsG0280006385.01.T01 MTR_7g007080 38.832 394 218 11 12 400 4 379 5.29e-65 213
MsG0280006385.01.T01 MTR_4g098590 38.083 386 218 10 14 391 1 373 2.83e-62 205
MsG0280006385.01.T01 MTR_1g041245 33.007 409 227 13 7 398 6 384 1.95e-55 187
MsG0280006385.01.T01 MTR_2g007550 33.492 421 167 15 1 397 1 332 1.11e-53 182
MsG0280006385.01.T01 MTR_7g075800 31.990 397 220 10 10 368 7 391 7.07e-50 179
MsG0280006385.01.T01 MTR_5g045170 33.095 420 226 14 2 399 4 390 7.38e-49 171
MsG0280006385.01.T01 MTR_5g058000 35.049 408 212 14 7 398 3 373 1.71e-48 169
MsG0280006385.01.T01 MTR_1g066830 32.117 411 228 13 9 398 5 385 7.71e-48 167
MsG0280006385.01.T01 MTR_5g073420 35.149 404 211 16 10 397 9 377 1.60e-47 167
MsG0280006385.01.T01 MTR_7g098510 32.673 404 229 13 8 397 14 388 2.49e-46 164
MsG0280006385.01.T01 MTR_1g085120 32.439 410 222 15 12 398 92 469 2.67e-46 166
MsG0280006385.01.T01 MTR_6g040270 33.083 399 226 11 14 399 10 380 3.36e-46 163
MsG0280006385.01.T01 MTR_1g085120 33.171 410 219 17 12 398 167 544 7.46e-46 166
MsG0280006385.01.T01 MTR_7g032380 31.144 411 213 15 1 398 1 354 1.30e-45 161
MsG0280006385.01.T01 MTR_7g055943 32.930 413 224 16 9 398 37 419 3.95e-45 161
MsG0280006385.01.T01 MTR_1g108820 31.579 418 226 14 7 399 3 385 4.84e-45 160
MsG0280006385.01.T01 MTR_3g036250 31.486 397 223 14 12 397 5 363 1.16e-44 159
MsG0280006385.01.T01 MTR_1089s0010 31.683 404 233 11 8 398 4 377 1.19e-44 159
MsG0280006385.01.T01 MTR_7g115270 29.929 421 249 13 1 397 1 399 2.47e-44 159
MsG0280006385.01.T01 MTR_5g058100 33.170 407 229 14 7 398 4 382 2.93e-44 158
MsG0280006385.01.T01 MTR_7g056433 30.361 415 242 12 1 397 1 386 5.94e-44 157
MsG0280006385.01.T01 MTR_7g098570 33.252 412 224 16 3 396 11 389 8.36e-43 156
MsG0280006385.01.T01 MTR_6g045333 31.894 417 229 16 8 398 57 444 1.51e-42 155
MsG0280006385.01.T01 MTR_7g033990 31.343 402 228 15 7 392 6 375 5.38e-42 153
MsG0280006385.01.T01 MTR_7g026500 31.863 408 231 15 10 397 12 392 1.53e-41 151
MsG0280006385.01.T01 MTR_6g011460 31.566 415 237 14 7 404 41 425 2.00e-41 151
MsG0280006385.01.T01 MTR_7g034120 34.000 300 167 11 110 398 27 306 3.68e-41 148
MsG0280006385.01.T01 MTR_4g039440 32.274 409 225 16 11 398 33 410 7.52e-41 150
MsG0280006385.01.T01 MTR_7g032370 30.829 386 213 13 27 398 5 350 2.05e-39 144
MsG0280006385.01.T01 MTR_7g033915 30.048 416 220 18 1 398 1 363 4.16e-39 144
MsG0280006385.01.T01 MTR_7g098480 32.609 414 220 16 8 400 14 389 1.31e-38 145
MsG0280006385.01.T01 MTR_6g022500 30.273 403 240 13 11 399 100 475 2.24e-38 144
MsG0280006385.01.T01 MTR_2g007530 31.894 417 166 15 7 399 14 336 7.42e-38 140
MsG0280006385.01.T01 MTR_7g056277 32.161 398 227 17 12 397 259 625 8.16e-38 144
MsG0280006385.01.T01 MTR_5g008920 30.000 410 242 12 1 397 1 378 1.50e-37 140
MsG0280006385.01.T01 MTR_3g105060 29.620 395 241 14 7 397 9 370 1.83e-37 139
MsG0280006385.01.T01 MTR_2g036470 29.808 416 247 12 2 399 7 395 2.83e-37 139
MsG0280006385.01.T01 MTR_7g056287 31.407 398 230 16 12 397 3 369 1.80e-36 137
MsG0280006385.01.T01 MTR_1g108800 31.296 409 195 14 7 399 3 341 5.11e-36 135
MsG0280006385.01.T01 MTR_7g034115 31.990 397 214 17 7 385 6 364 7.42e-36 135
MsG0280006385.01.T01 MTR_5g073370 30.788 406 242 13 12 404 5 384 1.99e-35 134
MsG0280006385.01.T01 MTR_7g088260 30.216 417 222 20 7 397 86 459 2.27e-35 135
MsG0280006385.01.T01 MTR_5g007410 28.469 418 250 13 2 397 15 405 2.52e-35 135
MsG0280006385.01.T01 MTR_3g040700 31.202 391 208 16 2 370 33 384 4.58e-35 134
MsG0280006385.01.T01 MTR_3g108560 29.529 403 231 15 12 397 20 386 5.30e-35 133
MsG0280006385.01.T01 MTR_3g071850 28.467 411 239 14 8 392 20 401 8.10e-35 137
MsG0280006385.01.T01 MTR_6g044560 31.905 420 228 14 7 398 173 562 8.91e-35 135
MsG0280006385.01.T01 MTR_0543s0010 29.639 415 230 13 2 397 76 447 1.28e-34 133
MsG0280006385.01.T01 MTR_6g044572 31.731 416 226 14 11 398 1 386 1.42e-34 132
MsG0280006385.01.T01 MTR_1g085120 33.654 312 168 12 12 305 179 469 2.26e-33 130
MsG0280006385.01.T01 MTR_3g467400 29.426 401 229 14 12 397 3 364 1.21e-32 126
MsG0280006385.01.T01 MTR_5g008950 28.500 400 232 13 14 397 1 362 2.01e-32 126
MsG0280006385.01.T01 MTR_3g108150 29.851 402 236 14 12 397 13 384 2.25e-32 126
MsG0280006385.01.T01 MTR_6g022360 29.777 403 228 13 11 397 42 405 3.64e-32 126
MsG0280006385.01.T01 MTR_5g045510 27.073 410 231 13 10 399 10 371 4.51e-32 125
MsG0280006385.01.T01 MTR_5g039450 26.923 416 216 15 8 397 2 355 1.05e-31 124
MsG0280006385.01.T01 MTR_0009s0080 29.275 386 234 10 1 372 7 367 1.38e-31 124
MsG0280006385.01.T01 MTR_7g056420 28.818 406 221 15 7 394 4 359 1.52e-30 124
MsG0280006385.01.T01 MTR_0492s0020 29.199 387 217 12 2 374 76 419 1.69e-30 122
MsG0280006385.01.T01 MTR_7g056430 28.818 406 221 15 7 394 4 359 1.92e-30 124
MsG0280006385.01.T01 MTR_7g021990 30.000 370 227 11 12 373 48 393 4.05e-30 120
MsG0280006385.01.T01 MTR_5g012840 29.912 341 167 13 37 372 14 287 6.31e-30 118
MsG0280006385.01.T01 MTR_3g082890 28.200 461 233 19 1 390 1 434 7.97e-30 120
MsG0280006385.01.T01 MTR_7g060470 27.949 390 223 13 12 374 3 361 1.17e-29 119
MsG0280006385.01.T01 MTR_7g021950 30.000 370 227 11 12 373 48 393 1.55e-29 120
MsG0280006385.01.T01 MTR_3g023630 29.134 381 219 13 8 374 4 347 1.75e-29 118
MsG0280006385.01.T01 MTR_3g082890 29.227 414 211 17 1 372 81 454 2.55e-29 119
MsG0280006385.01.T01 MTR_1g108820 32.390 318 175 11 7 305 3 299 3.16e-29 117
MsG0280006385.01.T01 MTR_7g022105 29.759 373 226 11 12 374 49 395 5.80e-28 114
MsG0280006385.01.T01 MTR_5g061680 31.642 335 173 12 10 337 9 294 1.40e-27 112
MsG0280006385.01.T01 MTR_2g007610 40.909 154 85 3 247 399 2 150 3.69e-27 106
MsG0280006385.01.T01 MTR_7g034110 30.667 375 181 13 7 372 6 310 3.91e-27 111
MsG0280006385.01.T01 MTR_5g073340 29.565 345 183 10 7 338 3 300 5.42e-27 109
MsG0280006385.01.T01 MTR_7g034090 38.857 175 87 5 233 397 145 309 6.51e-26 108
MsG0280006385.01.T01 MTR_7g034090 38.608 158 76 4 10 162 2 143 6.18e-17 82.4
MsG0280006385.01.T01 MTR_3g107140 39.247 186 87 6 34 207 12 183 8.30e-26 103
MsG0280006385.01.T01 MTR_7g056280 33.493 209 127 6 196 397 367 570 9.61e-26 109
MsG0280006385.01.T01 MTR_7g056280 35.359 181 107 4 14 194 8 178 4.18e-18 86.7
MsG0280006385.01.T01 MTR_8g085430 33.796 216 117 8 1 207 1 199 4.16e-25 105
MsG0280006385.01.T01 MTR_7g033470 40.361 166 47 4 1 163 1 117 4.35e-25 100
MsG0280006385.01.T01 MTR_5g039490 25.926 405 242 14 8 399 16 375 1.23e-24 104
MsG0280006385.01.T01 MTR_5g031970 26.536 407 233 12 2 399 6 355 1.42e-24 103
MsG0280006385.01.T01 MTR_2g007460 42.857 126 53 2 1 126 1 107 1.51e-24 97.8
MsG0280006385.01.T01 MTR_3g106960 37.430 179 97 8 220 392 21 190 1.61e-24 101
MsG0280006385.01.T01 MTR_5g063950 32.721 272 143 10 147 397 107 359 1.80e-24 103
MsG0280006385.01.T01 MTR_5g084070 28.352 455 227 19 1 392 1 419 1.89e-24 104
MsG0280006385.01.T01 MTR_7g056020 27.431 401 225 12 12 394 16 368 4.27e-24 105
MsG0280006385.01.T01 MTR_5g013500 30.116 259 149 12 162 396 111 361 4.93e-23 99.8
MsG0280006385.01.T01 MTR_3g087260 31.186 295 169 11 117 397 180 454 1.70e-22 99.4
MsG0280006385.01.T01 MTR_3g087260 31.438 299 149 13 12 301 12 263 9.09e-20 91.3
MsG0280006385.01.T01 MTR_8g077460 26.485 404 240 14 12 398 10 373 4.68e-22 97.1
MsG0280006385.01.T01 MTR_7g114710 26.847 406 230 15 7 397 8 361 7.02e-22 96.7
MsG0280006385.01.T01 MTR_3g108560 30.392 306 174 12 12 305 20 298 8.24e-22 95.5
MsG0280006385.01.T01 MTR_8g467800 26.742 445 253 13 12 397 20 450 1.15e-21 97.1
MsG0280006385.01.T01 MTR_5g054920 33.816 207 106 10 192 385 2 190 6.28e-21 90.1
MsG0280006385.01.T01 MTR_6g022520 28.824 340 192 15 84 401 6 317 6.38e-21 93.2
MsG0280006385.01.T01 MTR_4g080610 24.627 402 224 12 14 397 14 354 6.94e-21 93.6
MsG0280006385.01.T01 MTR_5g065100 25.897 390 232 11 14 398 10 347 7.36e-21 94.4
MsG0280006385.01.T01 MTR_3g109982 33.101 287 143 14 138 400 217 478 7.38e-21 95.5
MsG0280006385.01.T01 MTR_3g109982 30.675 326 164 15 1 305 1 285 1.09e-17 85.9
MsG0280006385.01.T01 MTR_5g039470 26.039 361 211 10 29 368 2 327 2.51e-20 91.7
MsG0280006385.01.T01 MTR_7g056447 34.021 194 110 4 12 204 9 185 1.40e-19 88.6
MsG0280006385.01.T01 MTR_1g053050 45.783 83 42 1 318 400 36 115 6.32e-19 82.4
MsG0280006385.01.T01 MTR_1g038710 24.609 447 253 15 12 392 19 447 7.06e-19 88.6
MsG0280006385.01.T01 MTR_4g056020 25.792 442 235 18 12 385 9 425 8.94e-19 88.2
MsG0280006385.01.T01 MTR_8g062080 25.112 446 258 19 7 397 18 442 1.03e-18 88.2
MsG0280006385.01.T01 MTR_7g094030 27.865 445 213 20 3 371 19 431 4.27e-18 86.3
MsG0280006385.01.T01 MTR_8g062270 23.529 459 259 14 10 397 14 451 7.75e-18 85.5
MsG0280006385.01.T01 MTR_4g134150 31.633 196 112 5 12 207 14 187 9.75e-18 82.0
MsG0280006385.01.T01 MTR_3g110010 30.675 326 164 15 1 305 1 285 1.47e-17 85.1
MsG0280006385.01.T01 MTR_3g094980 43.011 93 48 2 280 372 30 117 1.58e-17 80.1
MsG0280006385.01.T01 MTR_2g072530 23.965 459 248 18 12 397 13 443 1.86e-17 84.3
MsG0280006385.01.T01 MTR_5g082930 50.575 87 41 1 14 98 17 103 3.23e-17 80.1
MsG0280006385.01.T01 MTR_5g080710 25.455 440 245 18 11 392 32 446 5.87e-17 82.8
MsG0280006385.01.T01 MTR_4g056030 24.834 451 246 16 12 394 9 434 8.23e-17 82.4
MsG0280006385.01.T01 MTR_8g014260 26.105 475 248 17 2 401 6 452 1.80e-16 81.3
MsG0280006385.01.T01 MTR_8g062310 26.067 445 234 20 9 398 22 426 1.83e-16 81.3
MsG0280006385.01.T01 MTR_1377s0010 35.252 139 74 4 246 379 7 134 3.76e-16 75.1
MsG0280006385.01.T01 MTR_8g468810 30.244 205 127 7 12 210 25 219 1.15e-15 77.8
MsG0280006385.01.T01 MTR_8g468810 30.244 205 127 7 12 210 25 219 1.29e-15 77.8
MsG0280006385.01.T01 MTR_5g058350 31.579 209 101 6 8 215 4 171 1.97e-15 74.3
MsG0280006385.01.T01 MTR_8g468810 30.244 205 127 7 12 210 25 219 2.05e-15 77.4
MsG0280006385.01.T01 MTR_8g468810 30.000 210 131 7 7 210 20 219 2.54e-15 77.4
MsG0280006385.01.T01 MTR_8g468810 30.000 210 131 7 7 210 20 219 3.05e-15 77.4
MsG0280006385.01.T01 MTR_1g013560 29.384 211 132 7 6 211 13 211 1.37e-14 74.7
MsG0280006385.01.T01 MTR_4g032730 30.242 248 132 9 11 242 14 236 2.51e-14 74.7
MsG0280006385.01.T01 MTR_1g013560 29.384 211 132 7 6 211 13 211 2.83e-14 74.7
MsG0280006385.01.T01 MTR_4g093690 32.127 221 116 11 12 221 18 215 4.32e-14 72.4
MsG0280006385.01.T01 MTR_7g033945 34.043 188 105 9 1 184 1 173 5.19e-14 70.5
MsG0280006385.01.T01 MTR_8g014160 25.296 423 238 17 12 397 41 422 7.31e-14 73.2
MsG0280006385.01.T01 MTR_5g076150 35.556 180 82 8 148 298 26 200 9.20e-14 70.9
MsG0280006385.01.T01 MTR_8g445780 27.306 271 175 8 2 269 5 256 1.36e-13 72.0
MsG0280006385.01.T01 MTR_4g055580 30.870 230 120 7 12 208 100 323 2.16e-13 72.4
MsG0280006385.01.T01 MTR_4g080590 23.973 438 243 14 12 386 23 433 4.38e-13 70.9
MsG0280006385.01.T01 MTR_2g082800 28.800 250 131 10 1 221 16 247 4.89e-13 70.5
MsG0280006385.01.T01 MTR_1g115250 25.882 425 226 19 3 371 23 414 5.62e-13 70.5
MsG0280006385.01.T01 MTR_8g467800 31.472 197 124 5 12 208 20 205 1.77e-12 68.6
MsG0280006385.01.T01 MTR_3g095630 31.111 180 91 6 227 391 15 176 1.78e-12 66.2
MsG0280006385.01.T01 MTR_5g087940 28.879 232 123 9 12 225 26 233 2.21e-12 68.6
MsG0280006385.01.T01 MTR_3g006580 34.783 184 92 9 14 191 35 196 3.61e-12 67.8
MsG0280006385.01.T01 MTR_2g099980 25.000 300 179 8 12 300 38 302 3.82e-12 67.8
MsG0280006385.01.T01 MTR_7g023310 29.648 199 121 6 12 208 26 207 4.98e-12 67.8
MsG0280006385.01.T01 MTR_2g082850 32.222 180 104 6 3 180 13 176 5.82e-12 67.0
MsG0280006385.01.T01 MTR_2g007100 44.776 67 37 0 11 77 1 67 7.78e-12 61.2
MsG0280006385.01.T01 MTR_5g033200 28.977 176 98 6 229 391 12 173 9.03e-12 63.9
MsG0280006385.01.T01 MTR_4g045900 27.532 316 165 12 7 300 21 294 9.46e-12 67.0
MsG0280006385.01.T01 MTR_5g073400 35.000 120 69 2 110 229 23 133 1.12e-11 62.4
MsG0280006385.01.T01 MTR_1g011430 28.500 200 122 7 12 208 7 188 1.28e-11 65.9
MsG0280006385.01.T01 MTR_3g048290 23.297 455 233 19 11 382 22 443 1.44e-11 66.2
MsG0280006385.01.T01 MTR_1g013630 25.879 313 198 10 12 307 39 334 3.20e-11 64.7
MsG0280006385.01.T01 MTR_7g081290 30.000 140 75 4 265 390 119 249 3.50e-11 63.5
MsG0280006385.01.T01 MTR_8g468840 28.448 232 139 9 12 233 14 228 3.60e-11 65.1
MsG0280006385.01.T01 MTR_1g492880 47.126 87 43 2 12 98 6 89 4.78e-11 59.3
MsG0280006385.01.T01 MTR_1g492880 47.126 87 43 2 12 98 6 89 4.80e-11 59.7
MsG0280006385.01.T01 MTR_7g098590 44.000 75 39 1 8 82 14 85 5.79e-11 60.5
MsG0280006385.01.T01 MTR_2g047858 30.622 209 118 9 12 211 115 305 8.82e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006385.01.T01 AT4G10400 27.842 431 244 14 11 398 1 407 3.07e-31 123
MsG0280006385.01.T01 AT4G10400 27.842 431 244 14 11 398 1 407 3.07e-31 123
MsG0280006385.01.T01 AT4G10400 27.842 431 244 14 11 398 1 407 3.07e-31 123
MsG0280006385.01.T01 AT3G50710 28.153 444 242 16 11 397 1 424 5.52e-29 117
MsG0280006385.01.T01 AT4G00160 27.602 442 244 16 12 396 16 438 1.60e-28 116
MsG0280006385.01.T01 AT5G38590 26.847 406 230 13 11 372 1 383 5.72e-26 108
MsG0280006385.01.T01 AT4G26350 27.111 450 240 18 11 397 1 425 7.82e-26 108
MsG0280006385.01.T01 AT5G56380 26.087 460 243 15 11 397 1 436 1.71e-25 107
MsG0280006385.01.T01 AT5G56380 26.087 460 243 15 11 397 1 436 1.71e-25 107
MsG0280006385.01.T01 AT5G56420 27.727 440 238 19 12 397 6 419 1.79e-25 107
MsG0280006385.01.T01 AT5G56420 27.727 440 238 19 12 397 6 419 1.79e-25 107
MsG0280006385.01.T01 AT5G56420 27.727 440 238 19 12 397 6 419 1.79e-25 107
MsG0280006385.01.T01 AT4G13985 25.641 468 254 16 5 399 12 458 2.95e-25 107
MsG0280006385.01.T01 AT1G55660 26.724 464 249 19 5 397 46 489 1.19e-24 105
MsG0280006385.01.T01 AT3G49030 26.726 449 235 19 12 397 21 438 4.78e-24 103
MsG0280006385.01.T01 AT5G56820 27.088 443 232 15 12 397 15 423 6.49e-24 103
MsG0280006385.01.T01 AT3G52680 26.742 445 244 15 12 397 21 442 2.45e-23 101
MsG0280006385.01.T01 AT5G56440 26.974 456 237 19 11 398 1 428 2.87e-23 101
MsG0280006385.01.T01 AT5G60610 25.424 413 230 13 11 372 1 386 9.33e-23 99.4
MsG0280006385.01.T01 AT5G60610 25.424 413 230 13 11 372 1 386 9.33e-23 99.4
MsG0280006385.01.T01 AT5G56370 27.314 443 241 16 11 397 1 418 1.14e-22 99.4
MsG0280006385.01.T01 AT5G56370 27.314 443 241 16 11 397 1 418 1.14e-22 99.4
MsG0280006385.01.T01 AT1G66290 26.170 470 229 19 7 399 24 452 1.21e-21 96.7
MsG0280006385.01.T01 AT4G26340 25.951 447 240 17 11 397 1 416 1.59e-21 96.3
MsG0280006385.01.T01 AT5G38590 33.838 198 115 6 11 208 1 182 1.99e-21 94.0
MsG0280006385.01.T01 AT3G49030 26.128 421 247 16 12 397 21 412 2.59e-21 95.5
MsG0280006385.01.T01 AT1G16930 30.964 197 120 5 12 208 15 195 3.16e-21 95.5
MsG0280006385.01.T01 AT1G16930 30.964 197 120 5 12 208 15 195 3.16e-21 95.5
MsG0280006385.01.T01 AT1G16930 30.964 197 120 5 12 208 15 195 3.16e-21 95.5
MsG0280006385.01.T01 AT4G09920 33.673 196 116 5 11 206 1 182 3.96e-21 93.6
MsG0280006385.01.T01 AT4G09920 33.673 196 116 5 11 206 1 182 3.96e-21 93.6
MsG0280006385.01.T01 AT4G09920 33.673 196 116 5 11 206 1 182 4.52e-21 92.8
MsG0280006385.01.T01 AT4G09920 33.673 196 116 5 11 206 1 182 4.52e-21 92.8
MsG0280006385.01.T01 AT4G09920 33.673 196 116 5 11 206 1 182 4.52e-21 92.8
MsG0280006385.01.T01 AT4G14103 35.071 211 113 7 8 211 4 197 7.90e-21 93.6
MsG0280006385.01.T01 AT4G14103 35.071 211 113 7 8 211 4 197 7.90e-21 93.6
MsG0280006385.01.T01 AT4G14103 35.545 211 112 7 8 211 4 197 1.02e-20 94.0
MsG0280006385.01.T01 AT1G32375 25.225 444 252 16 11 398 1 420 2.06e-20 92.8
MsG0280006385.01.T01 AT1G32375 25.225 444 252 16 11 398 1 420 2.06e-20 92.8
MsG0280006385.01.T01 AT2G26860 26.877 413 234 12 11 372 1 396 2.47e-20 92.4
MsG0280006385.01.T01 AT2G26860 26.877 413 234 12 11 372 1 396 2.47e-20 92.4
MsG0280006385.01.T01 AT5G41630 33.180 217 126 5 1 208 1 207 3.12e-20 92.8
MsG0280006385.01.T01 AT1G55660 34.146 205 119 8 5 206 46 237 5.90e-20 90.9
MsG0280006385.01.T01 AT5G41830 34.862 218 121 7 2 208 3 210 6.30e-20 92.0
MsG0280006385.01.T01 AT5G56810 26.818 440 245 15 12 397 15 431 8.98e-20 91.3
MsG0280006385.01.T01 AT5G44940 28.606 409 234 18 12 399 5 376 1.53e-19 90.1
MsG0280006385.01.T01 AT5G62970 26.596 470 244 22 11 400 1 449 4.99e-19 89.0
MsG0280006385.01.T01 AT3G26930 27.133 457 235 20 7 397 16 440 8.34e-19 88.6
MsG0280006385.01.T01 AT3G59200 35.377 212 105 9 12 211 7 198 8.87e-19 87.4
MsG0280006385.01.T01 AT3G52680 32.487 197 119 5 12 208 21 203 9.30e-19 87.4
MsG0280006385.01.T01 AT3G59240 31.169 231 129 7 12 233 8 217 9.75e-19 88.6
MsG0280006385.01.T01 AT4G13965 25.959 443 243 19 12 399 10 422 1.06e-18 87.8
MsG0280006385.01.T01 AT1G69630 24.946 465 250 14 7 399 13 450 1.54e-18 87.4
MsG0280006385.01.T01 AT5G38570 25.666 413 241 13 11 397 1 373 1.55e-18 87.0
MsG0280006385.01.T01 AT3G59200 35.377 212 105 9 12 211 7 198 2.22e-18 87.4
MsG0280006385.01.T01 AT5G56370 34.000 200 114 6 11 209 1 183 2.25e-18 85.9
MsG0280006385.01.T01 AT4G14096 36.098 205 109 8 12 211 8 195 2.75e-18 87.0
MsG0280006385.01.T01 AT4G14096 36.098 205 109 8 12 211 8 195 2.75e-18 87.0
MsG0280006385.01.T01 AT3G58860 26.944 360 179 13 6 300 1 341 3.46e-18 86.7
MsG0280006385.01.T01 AT4G00315 31.527 203 115 7 11 206 1 186 6.98e-18 85.5
MsG0280006385.01.T01 AT4G00320 33.028 218 125 7 2 208 3 210 7.08e-18 85.9
MsG0280006385.01.T01 AT3G59190 30.698 215 130 5 1 208 1 203 7.85e-18 85.1
MsG0280006385.01.T01 AT5G22670 34.450 209 118 6 1 209 1 190 8.01e-18 85.5
MsG0280006385.01.T01 AT5G53640 29.108 213 125 5 12 221 22 211 9.40e-18 82.0
MsG0280006385.01.T01 AT3G59190 30.698 215 130 5 1 208 1 203 1.26e-17 85.1
MsG0280006385.01.T01 AT3G26922 31.200 250 147 9 12 258 14 241 1.48e-17 83.2
MsG0280006385.01.T01 AT3G26922 31.200 250 147 9 12 258 14 241 1.48e-17 83.2
MsG0280006385.01.T01 AT5G56560 24.943 437 249 17 13 397 6 415 1.51e-17 84.3
MsG0280006385.01.T01 AT5G44950 26.782 463 235 18 12 399 4 437 1.91e-17 84.3
MsG0280006385.01.T01 AT4G15060 34.466 206 114 7 6 206 166 355 2.56e-17 84.3
MsG0280006385.01.T01 AT4G15060 34.826 201 110 7 11 206 25 209 2.63e-17 83.6
MsG0280006385.01.T01 AT1G78760 22.414 464 267 17 3 400 7 443 2.63e-17 84.0
MsG0280006385.01.T01 AT5G41840 33.784 222 119 9 3 209 5 213 4.30e-17 83.6
MsG0280006385.01.T01 AT3G59210 32.850 207 111 7 12 208 7 195 4.65e-17 83.2
MsG0280006385.01.T01 AT3G59210 32.850 207 111 7 12 208 7 195 4.65e-17 83.2
MsG0280006385.01.T01 AT3G59210 32.850 207 111 7 12 208 7 195 4.65e-17 83.2
MsG0280006385.01.T01 AT3G59210 32.850 207 111 7 12 208 7 195 4.65e-17 83.2
MsG0280006385.01.T01 AT3G59210 32.850 207 111 7 12 208 7 195 4.65e-17 83.2
MsG0280006385.01.T01 AT5G56690 25.178 421 228 19 14 372 4 399 5.67e-17 82.4
MsG0280006385.01.T01 AT3G51530 25.296 423 235 15 2 371 20 414 7.01e-17 82.8
MsG0280006385.01.T01 AT1G51370 29.317 249 145 8 12 260 19 236 8.85e-17 81.3
MsG0280006385.01.T01 AT2G26030 33.168 202 110 7 12 208 4 185 1.12e-16 82.0
MsG0280006385.01.T01 AT2G26030 33.168 202 110 7 12 208 4 185 1.12e-16 82.0
MsG0280006385.01.T01 AT2G26030 33.168 202 110 7 12 208 4 185 1.20e-16 82.0
MsG0280006385.01.T01 AT1G51370 29.317 249 145 8 12 260 19 236 1.20e-16 81.6
MsG0280006385.01.T01 AT1G51370 29.317 249 145 8 12 260 19 236 1.22e-16 81.6
MsG0280006385.01.T01 AT1G60400 31.343 201 123 4 9 208 11 197 1.45e-16 81.3
MsG0280006385.01.T01 AT3G49150 30.870 230 136 6 9 233 13 224 1.91e-16 81.3
MsG0280006385.01.T01 AT5G27750 30.244 205 125 6 10 208 3 195 2.72e-16 80.9
MsG0280006385.01.T01 AT5G27750 30.244 205 125 6 10 208 3 195 2.83e-16 80.1
MsG0280006385.01.T01 AT5G56810 33.668 199 114 7 12 208 15 197 3.60e-16 79.3
MsG0280006385.01.T01 AT5G25850 28.218 202 125 5 11 212 19 200 3.70e-16 80.5
MsG0280006385.01.T01 AT1G78750 29.464 224 133 6 7 225 13 216 3.97e-16 80.5
MsG0280006385.01.T01 AT1G78750 29.464 224 133 6 7 225 13 216 3.97e-16 80.5
MsG0280006385.01.T01 AT5G22660 30.476 210 125 7 1 208 1 191 5.39e-16 78.6
MsG0280006385.01.T01 AT5G22730 30.964 197 117 6 12 206 28 207 9.08e-16 79.0
MsG0280006385.01.T01 AT5G22730 30.964 197 117 6 12 206 28 207 9.50e-16 79.3
MsG0280006385.01.T01 AT5G22730 30.964 197 117 6 12 206 28 207 9.50e-16 79.3
MsG0280006385.01.T01 AT5G22610 23.462 439 266 16 12 400 18 436 1.27e-15 79.0
MsG0280006385.01.T01 AT5G22660 30.769 208 123 7 1 206 1 189 1.62e-15 78.6
MsG0280006385.01.T01 AT5G53840 32.487 197 114 5 12 208 18 195 1.91e-15 78.2
MsG0280006385.01.T01 AT2G04230 25.850 441 238 18 3 380 2 416 1.95e-15 78.2
MsG0280006385.01.T01 AT1G78730 22.018 436 256 11 11 399 21 419 2.23e-15 77.8
MsG0280006385.01.T01 AT5G22700 25.193 389 227 13 12 368 43 399 2.75e-15 77.8
MsG0280006385.01.T01 AT1G80470 28.629 248 147 9 1 241 6 230 4.10e-15 77.4
MsG0280006385.01.T01 AT3G58960 29.818 275 156 11 11 273 1 250 4.67e-15 77.0
MsG0280006385.01.T01 AT3G62440 29.665 209 127 7 11 208 1 200 5.50e-15 77.0
MsG0280006385.01.T01 AT5G22700 30.348 201 120 5 12 211 6 187 6.22e-15 76.6
MsG0280006385.01.T01 AT5G22700 30.348 201 120 5 12 211 6 187 6.22e-15 76.6
MsG0280006385.01.T01 AT5G22700 30.348 201 120 5 12 211 6 187 6.22e-15 76.6
MsG0280006385.01.T01 AT5G22700 30.348 201 120 5 12 211 6 187 6.22e-15 76.6
MsG0280006385.01.T01 AT5G22700 30.348 201 120 5 12 211 43 224 6.50e-15 76.6
MsG0280006385.01.T01 AT3G59160 28.125 256 142 7 4 233 5 244 8.14e-15 76.3
MsG0280006385.01.T01 AT5G53635 29.851 201 114 6 14 208 2 181 1.92e-14 75.1
MsG0280006385.01.T01 AT3G49040 32.353 204 107 8 12 206 17 198 1.96e-14 73.9
MsG0280006385.01.T01 AT3G26920 28.986 276 160 12 143 397 38 298 2.08e-14 73.9
MsG0280006385.01.T01 AT3G42770 29.915 234 130 9 14 234 1 213 2.53e-14 75.1
MsG0280006385.01.T01 AT3G58900 30.709 254 136 10 11 251 1 227 2.82e-14 73.6
MsG0280006385.01.T01 AT3G59230 29.279 222 128 8 1 208 1 207 2.90e-14 74.7
MsG0280006385.01.T01 AT3G49020 26.362 459 227 20 12 397 22 442 3.56e-14 74.3
MsG0280006385.01.T01 AT3G58900 30.709 254 136 10 11 251 1 227 3.77e-14 73.6
MsG0280006385.01.T01 AT3G58900 30.709 254 136 10 11 251 1 227 3.77e-14 73.6
MsG0280006385.01.T01 AT5G38390 30.667 225 129 9 11 233 1 200 4.19e-14 74.3
MsG0280006385.01.T01 AT3G58940 28.395 243 132 10 11 234 1 220 4.20e-14 74.7
MsG0280006385.01.T01 AT3G58940 28.395 243 132 10 11 234 1 220 4.20e-14 74.7
MsG0280006385.01.T01 AT3G58900 30.709 254 136 10 11 251 1 227 7.11e-14 73.6
MsG0280006385.01.T01 AT3G14710 25.467 428 232 17 12 382 26 423 1.05e-13 72.8
MsG0280006385.01.T01 AT5G44960 27.416 445 228 21 12 397 5 413 1.20e-13 72.4
MsG0280006385.01.T01 AT1G78840 30.612 196 115 6 17 212 11 185 1.21e-13 72.8
MsG0280006385.01.T01 AT1G78840 30.612 196 115 6 17 212 11 185 1.21e-13 72.8
MsG0280006385.01.T01 AT3G56780 27.090 299 173 10 14 308 9 266 1.22e-13 72.8
MsG0280006385.01.T01 AT3G56780 27.090 299 173 10 14 308 9 266 1.45e-13 72.4
MsG0280006385.01.T01 AT1G48400 31.731 208 123 7 6 208 4 197 2.24e-13 72.0
MsG0280006385.01.T01 AT1G48400 31.731 208 123 7 6 208 4 197 2.50e-13 72.0
MsG0280006385.01.T01 AT3G59170 29.545 220 125 6 12 208 7 219 2.55e-13 71.6
MsG0280006385.01.T01 AT3G56780 27.090 299 173 10 14 308 9 266 3.14e-13 71.2
MsG0280006385.01.T01 AT5G38590 32.468 154 89 5 11 164 1 139 3.27e-13 70.1
MsG0280006385.01.T01 AT5G18770 23.644 461 256 15 12 399 24 461 4.22e-13 71.2
MsG0280006385.01.T01 AT3G58920 28.881 277 166 12 11 273 1 260 5.69e-13 70.9
MsG0280006385.01.T01 AT1G22000 24.313 473 247 20 3 404 24 456 5.72e-13 70.9
MsG0280006385.01.T01 AT5G56560 30.769 195 116 7 13 206 6 182 5.83e-13 70.9
MsG0280006385.01.T01 AT3G44810 31.429 210 125 7 6 208 1 198 6.43e-13 70.5
MsG0280006385.01.T01 AT5G18780 29.327 208 127 6 3 209 2 190 6.50e-13 70.1
MsG0280006385.01.T01 AT5G18780 29.327 208 127 6 3 209 2 190 6.50e-13 70.1
MsG0280006385.01.T01 AT1G58310 29.730 222 119 6 12 211 8 214 7.52e-13 70.5
MsG0280006385.01.T01 AT5G22720 30.882 204 119 9 7 206 18 203 7.61e-13 70.5
MsG0280006385.01.T01 AT5G44980 27.195 467 228 24 12 401 4 435 9.20e-13 70.1
MsG0280006385.01.T01 AT5G44980 27.195 467 228 24 12 401 4 435 9.20e-13 70.1
MsG0280006385.01.T01 AT3G58880 29.749 279 147 9 11 282 2 238 1.09e-12 69.7
MsG0280006385.01.T01 AT4G22280 32.159 227 129 7 11 234 1 205 1.15e-12 68.9
MsG0280006385.01.T01 AT2G29930 26.316 247 142 7 1 237 1 217 1.17e-12 69.7
MsG0280006385.01.T01 AT2G29930 26.316 247 142 7 1 237 1 217 1.17e-12 69.7
MsG0280006385.01.T01 AT5G18780 29.327 208 127 6 3 209 2 190 1.27e-12 69.7
MsG0280006385.01.T01 AT5G18780 29.327 208 127 6 3 209 2 190 1.27e-12 69.7
MsG0280006385.01.T01 AT1G16940 23.007 439 248 16 14 399 13 414 1.53e-12 69.3
MsG0280006385.01.T01 AT4G22280 32.159 227 129 7 11 234 1 205 1.53e-12 69.3
MsG0280006385.01.T01 AT1G13780 29.756 205 124 8 10 206 8 200 1.69e-12 68.6
MsG0280006385.01.T01 AT1G13780 29.756 205 124 8 10 206 8 200 1.76e-12 69.3
MsG0280006385.01.T01 AT2G42720 33.659 205 116 9 11 208 1 192 1.78e-12 68.9
MsG0280006385.01.T01 AT1G26890 30.220 182 99 7 13 190 39 196 2.08e-12 67.8
MsG0280006385.01.T01 AT1G26890 30.220 182 99 7 13 190 39 196 2.08e-12 67.8
MsG0280006385.01.T01 AT5G22610 29.353 201 130 5 12 211 18 207 2.45e-12 68.9
MsG0280006385.01.T01 AT3G60040 31.061 264 137 12 12 255 13 251 2.80e-12 68.9
MsG0280006385.01.T01 AT3G60040 31.179 263 138 12 12 255 232 470 2.96e-12 68.9
MsG0280006385.01.T01 AT3G60040 31.179 263 138 12 12 255 230 468 3.23e-12 68.6
MsG0280006385.01.T01 AT1G26890 30.556 180 103 7 13 191 39 197 3.28e-12 68.2
MsG0280006385.01.T01 AT5G56400 25.111 450 245 20 11 397 32 452 3.44e-12 68.2
MsG0280006385.01.T01 AT3G60040 31.061 264 137 12 12 255 233 471 3.54e-12 68.9
MsG0280006385.01.T01 AT3G60040 31.061 264 137 12 12 255 232 470 3.87e-12 68.6
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 1 356 4.53e-12 67.8
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 1 356 4.53e-12 67.8
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 1 356 4.53e-12 67.8
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 1 356 4.53e-12 67.8
MsG0280006385.01.T01 AT1G26890 30.726 179 102 7 13 190 39 196 4.95e-12 67.4
MsG0280006385.01.T01 AT1G26890 30.726 179 102 7 13 190 39 196 4.95e-12 67.4
MsG0280006385.01.T01 AT2G42730 29.327 208 123 8 9 206 2 195 5.51e-12 67.8
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 1 356 5.81e-12 67.8
MsG0280006385.01.T01 AT1G06630 26.902 368 196 15 1 307 10 365 6.23e-12 67.4
MsG0280006385.01.T01 AT3G03030 28.774 212 119 8 11 208 1 194 6.43e-12 66.6
MsG0280006385.01.T01 AT1G66300 28.708 209 128 4 2 208 19 208 6.75e-12 67.4
MsG0280006385.01.T01 AT3G03030 28.774 212 119 8 11 208 1 194 7.62e-12 67.4
MsG0280006385.01.T01 AT1G06630 27.147 361 190 15 1 300 1 349 8.08e-12 66.6
MsG0280006385.01.T01 AT1G06630 27.147 361 190 15 1 300 1 349 8.08e-12 66.6
MsG0280006385.01.T01 AT1G06630 30.847 295 168 14 1 283 1 271 9.47e-12 65.9
MsG0280006385.01.T01 AT1G60410 28.095 210 127 6 5 208 3 194 1.21e-11 66.2
MsG0280006385.01.T01 AT5G25860 26.364 220 142 5 1 208 1 212 1.25e-11 66.6
MsG0280006385.01.T01 AT3G03040 30.583 206 124 6 11 209 1 194 1.49e-11 66.2
MsG0280006385.01.T01 AT1G52650 30.049 203 123 7 11 208 1 189 3.72e-11 65.1
MsG0280006385.01.T01 AT5G50270 29.066 289 174 10 11 295 1 262 3.81e-11 64.3
MsG0280006385.01.T01 AT3G58930 26.848 257 150 10 11 251 1 235 3.99e-11 65.1
MsG0280006385.01.T01 AT3G58930 26.848 257 150 10 11 251 1 235 3.99e-11 65.1
MsG0280006385.01.T01 AT3G58930 26.848 257 150 10 11 251 1 235 3.99e-11 65.1
MsG0280006385.01.T01 AT1G66310 28.155 206 131 4 3 208 10 198 4.79e-11 64.7
MsG0280006385.01.T01 AT5G50270 29.371 286 177 10 11 295 1 262 6.88e-11 63.9
MsG0280006385.01.T01 AT5G44490 25.628 199 132 6 12 208 17 201 7.56e-11 64.3
MsG0280006385.01.T01 AT3G44060 30.631 222 128 9 17 234 4 203 7.60e-11 63.9
MsG0280006385.01.T01 AT5G44490 25.628 199 132 6 12 208 17 201 9.06e-11 63.9
MsG0280006385.01.T01 AT4G13960 29.808 208 116 6 11 208 1 188 9.14e-11 63.9
MsG0280006385.01.T01 AT4G13960 29.808 208 116 6 11 208 1 188 9.14e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCACATAGTGCAAGATTTA+AGG 0.091839 2:+1178134 None:intergenic
AGTGAAATCACTTTCAAATT+TGG 0.139231 2:-1178614 MsG0280006385.01.T01:CDS
CAAAGCGATGGACTCATCTT+TGG 0.260393 2:-1179230 MsG0280006385.01.T01:CDS
TCAAAATCTTGACCTATATC+AGG 0.291732 2:-1178343 MsG0280006385.01.T01:intron
TACGTTAGCAAGATTTGTTC+TGG 0.299537 2:-1178077 MsG0280006385.01.T01:CDS
GTCGAGGATGAAAGTGTTAA+TGG 0.300753 2:+1179089 None:intergenic
GATTCCTCTGAACTTCTCTT+AGG 0.316429 2:-1179057 MsG0280006385.01.T01:CDS
TTGGTCTTTCCAATTGGTTT+TGG 0.320041 2:+1179182 None:intergenic
CGAAGCAGGAATAGGATTCT+TGG 0.331591 2:+1179163 None:intergenic
AGGTACGAGGCGACAACGAC+TGG 0.338901 2:-1178228 MsG0280006385.01.T01:CDS
AGGCAACTTGGAACAAATTC+CGG 0.358617 2:+1178166 None:intergenic
GGTTAGTGCTCAACTATGAT+TGG 0.361500 2:-1178404 MsG0280006385.01.T01:CDS
GAGAAGAGAGAATGCGAATC+AGG 0.362013 2:+1179289 None:intergenic
TTTCGACGTCGGCGATAGAT+AGG 0.368191 2:-1179335 MsG0280006385.01.T01:CDS
AGTAAATCTCTTTCAAATGT+AGG 0.374688 2:+1178815 None:intergenic
AAGATTTAAGGTTTGATGTA+AGG 0.398643 2:+1178146 None:intergenic
GAATTTCTCGAAGCAGGAAT+AGG 0.407965 2:+1179155 None:intergenic
CATAGGAAACTTAGGGAGTA+TGG 0.412782 2:+1178936 None:intergenic
TTCAATTTGACTGTGGTTAA+CGG 0.417486 2:-1178868 MsG0280006385.01.T01:CDS
TTTGAAGCTTAGGGCAATGA+TGG 0.418019 2:+1178361 None:intergenic
AGGATACTCATAGGAAACTT+AGG 0.419546 2:+1178928 None:intergenic
TTGACTTCACCAAAACCAAT+TGG 0.422545 2:-1179191 MsG0280006385.01.T01:CDS
GTAAATCTCTTTCAAATGTA+GGG 0.426376 2:+1178816 None:intergenic
ACGTAATGTGATTACGTTGT+TGG 0.427079 2:+1178095 None:intergenic
TTGAGTGAGGGTAATATAAG+AGG 0.430389 2:+1178841 None:intergenic
TTACAATTAAGGATACTCAT+AGG 0.431680 2:+1178919 None:intergenic
AGTCCATCGCTTTGAAAGAA+TGG 0.444323 2:+1179239 None:intergenic
TTAACAAACAAACCTGATAT+AGG 0.452045 2:+1178331 None:intergenic
GTTAGTGCTCAACTATGATT+GGG 0.453668 2:-1178403 MsG0280006385.01.T01:CDS
GGATTCTTGGTCTTTCCAAT+TGG 0.454389 2:+1179176 None:intergenic
AAATTTGAAAGTGATTTCAC+TGG 0.455155 2:+1178616 None:intergenic
TTGAACGTAGGAAAGTCATA+AGG 0.462654 2:+1178438 None:intergenic
AAAAGAAAATTGGGGCAATC+CGG 0.463722 2:-1178185 MsG0280006385.01.T01:CDS
CCACGAATGGGTTGATATAG+TGG 0.480984 2:-1179019 MsG0280006385.01.T01:CDS
CTTCCATTCTTTCAAAGCGA+TGG 0.485245 2:-1179242 MsG0280006385.01.T01:CDS
AGTTGAAGATCATCAAGAAC+TGG 0.488392 2:+1178751 None:intergenic
TATCCTCATACCCCTCTTGA+CGG 0.488959 2:-1178967 MsG0280006385.01.T01:CDS
TTGCGCTCGCGAGAAGCTGC+TGG 0.491830 2:-1179120 MsG0280006385.01.T01:CDS
CCACTATATCAACCCATTCG+TGG 0.493938 2:+1179019 None:intergenic
TTGTTGTTCTCAAGCTCCGT+TGG 0.495369 2:-1178891 MsG0280006385.01.T01:CDS
ACCTTAAATCTTGCACTATG+TGG 0.498845 2:-1178135 MsG0280006385.01.T01:CDS
AGGTTTGATGTAAGGCAACT+TGG 0.498897 2:+1178154 None:intergenic
ATGTGGGACTTTGCATCTGC+AGG 0.499774 2:-1178118 MsG0280006385.01.T01:CDS
CTACGTTCAACAATTTGACT+TGG 0.501442 2:-1178425 MsG0280006385.01.T01:CDS
GGATACTCATAGGAAACTTA+GGG 0.505669 2:+1178929 None:intergenic
GACATGTTGCAGAAACCCTT+GGG 0.507778 2:+1177975 None:intergenic
TCACCGTCAAGAGGGGTATG+AGG 0.514064 2:+1178964 None:intergenic
GTGACACAGGCTTGTTCGAT+GGG 0.514113 2:+1179264 None:intergenic
GAGGGGTATGAGGATAGAGA+TGG 0.517100 2:+1178974 None:intergenic
TGACATGTTGCAGAAACCCT+TGG 0.517712 2:+1177974 None:intergenic
GAAGACGAATTTCTCGAAGC+AGG 0.528607 2:+1179149 None:intergenic
TCCTCTGAACTTCTCTTAGG+TGG 0.529380 2:-1179054 MsG0280006385.01.T01:CDS
AGTGACACAGGCTTGTTCGA+TGG 0.543148 2:+1179263 None:intergenic
GTCAATTATCTCCATGCCCA+AGG 0.547530 2:-1177991 MsG0280006385.01.T01:CDS
TGAAAGAATGGAAGTGACAC+AGG 0.549540 2:+1179251 None:intergenic
GTTGCAGAAACCCTTGGGCA+TGG 0.550801 2:+1177980 None:intergenic
ATGCGAATCAGGATGTCGTC+CGG 0.560094 2:+1179300 None:intergenic
CCTTAAATCTTGCACTATGT+GGG 0.573102 2:-1178134 MsG0280006385.01.T01:CDS
GGTACGAGGCGACAACGACT+GGG 0.573495 2:-1178227 MsG0280006385.01.T01:CDS
TGAACGTAGGAAAGTCATAA+GGG 0.575242 2:+1178439 None:intergenic
AGCTTCTCGCGAGCGCAAGA+CGG 0.577847 2:+1179125 None:intergenic
TGGTCTCTTCACCGTCAAGA+GGG 0.579730 2:+1178956 None:intergenic
CCACAGTCAAATTGAACCAA+CGG 0.600897 2:+1178875 None:intergenic
TCAATTATCTCCATGCCCAA+GGG 0.617930 2:-1177990 MsG0280006385.01.T01:CDS
ATGGTCTCTTCACCGTCAAG+AGG 0.624860 2:+1178955 None:intergenic
CCGTTGGTTCAATTTGACTG+TGG 0.625731 2:-1178875 MsG0280006385.01.T01:CDS
TGGAAAATAGCAATAGCAGT+CGG 0.646002 2:+1178636 None:intergenic
GCCACCTAAGAGAAGTTCAG+AGG 0.647229 2:+1179053 None:intergenic
TATTATTAAAATAAGGTACG+AGG 0.647308 2:-1178241 MsG0280006385.01.T01:intron
AGGAATCGTATTCAATGTCG+AGG 0.648454 2:+1179073 None:intergenic
GGTCTCTTCACCGTCAAGAG+GGG 0.650530 2:+1178957 None:intergenic
ACGGAGCTTGAGAACAACAA+GGG 0.684071 2:+1178894 None:intergenic
TAAGCAGAAAATTTCGACGT+CGG 0.688430 2:-1179346 MsG0280006385.01.T01:CDS
CAAGTCAAATTGTTGAACGT+AGG 0.689503 2:+1178426 None:intergenic
AACGGAGCTTGAGAACAACA+AGG 0.693698 2:+1178893 None:intergenic
ACGTAGGAAAGTCATAAGGG+TGG 0.710618 2:+1178442 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTAACAATCATAT+TGG - Chr2:1178988-1179007 MsG0280006385.01.T01:CDS 10.0%
!! ATAAAGATAAAACAAAAGAA+AGG + Chr2:1179039-1179058 None:intergenic 15.0%
!!! AAGTATGTTTTATTATAGAA+TGG - Chr2:1178730-1178749 MsG0280006385.01.T01:CDS 15.0%
!!! ATTTTCAAGAAAAAGAAAAT+TGG - Chr2:1179102-1179121 MsG0280006385.01.T01:CDS 15.0%
!!! TTTTCAAGAAAAAGAAAATT+GGG - Chr2:1179103-1179122 MsG0280006385.01.T01:CDS 15.0%
!! CAAAAAAGACAGATAAATTA+AGG + Chr2:1178820-1178839 None:intergenic 20.0%
!! TATTATTAAAATAAGGTACG+AGG - Chr2:1179056-1179075 MsG0280006385.01.T01:CDS 20.0%
!! TTTCAAGAAAAAGAAAATTG+GGG - Chr2:1179104-1179123 MsG0280006385.01.T01:CDS 20.0%
!!! CTGTCTTTTTTGTATAATTT+AGG - Chr2:1178828-1178847 MsG0280006385.01.T01:CDS 20.0%
! AAATTTGAAAGTGATTTCAC+TGG + Chr2:1178684-1178703 None:intergenic 25.0%
! AGTAAATCTCTTTCAAATGT+AGG + Chr2:1178485-1178504 None:intergenic 25.0%
! AGTGAAATCACTTTCAAATT+TGG - Chr2:1178683-1178702 MsG0280006385.01.T01:CDS 25.0%
! CATTAAAAATATCCACGAAT+GGG - Chr2:1178266-1178285 MsG0280006385.01.T01:intron 25.0%
! GTAAATCTCTTTCAAATGTA+GGG + Chr2:1178484-1178503 None:intergenic 25.0%
! TTAACAAACAAACCTGATAT+AGG + Chr2:1178969-1178988 None:intergenic 25.0%
! TTACAATTAAGGATACTCAT+AGG + Chr2:1178381-1178400 None:intergenic 25.0%
!! AAGATTTAAGGTTTGATGTA+AGG + Chr2:1179154-1179173 None:intergenic 25.0%
!! GATTTTATGATGCTTCTATA+TGG - Chr2:1178519-1178538 MsG0280006385.01.T01:intron 25.0%
!!! TTTTAGAAACTATGACAATC+TGG - Chr2:1179255-1179274 MsG0280006385.01.T01:CDS 25.0%
GCATTAAAAATATCCACGAA+TGG - Chr2:1178265-1178284 MsG0280006385.01.T01:intron 30.0%
TCAAAATCTTGACCTATATC+AGG - Chr2:1178954-1178973 MsG0280006385.01.T01:CDS 30.0%
TTCAATTTGACTGTGGTTAA+CGG - Chr2:1178429-1178448 MsG0280006385.01.T01:CDS 30.0%
! CAACAAGGGTTTTACAATTA+AGG + Chr2:1178392-1178411 None:intergenic 30.0%
AAAAGAAAATTGGGGCAATC+CGG - Chr2:1179112-1179131 MsG0280006385.01.T01:CDS 35.0%
ACCTTAAATCTTGCACTATG+TGG - Chr2:1179162-1179181 MsG0280006385.01.T01:CDS 35.0%
ACGTAATGTGATTACGTTGT+TGG + Chr2:1179205-1179224 None:intergenic 35.0%
AGGATACTCATAGGAAACTT+AGG + Chr2:1178372-1178391 None:intergenic 35.0%
AGTTGAAGATCATCAAGAAC+TGG + Chr2:1178549-1178568 None:intergenic 35.0%
CAAGTCAAATTGTTGAACGT+AGG + Chr2:1178874-1178893 None:intergenic 35.0%
CCTTAAATCTTGCACTATGT+GGG - Chr2:1179163-1179182 MsG0280006385.01.T01:CDS 35.0%
CTACGTTCAACAATTTGACT+TGG - Chr2:1178872-1178891 MsG0280006385.01.T01:CDS 35.0%
GGATACTCATAGGAAACTTA+GGG + Chr2:1178371-1178390 None:intergenic 35.0%
GTTAGTGCTCAACTATGATT+GGG - Chr2:1178894-1178913 MsG0280006385.01.T01:CDS 35.0%
TAAGCAGAAAATTTCGACGT+CGG - Chr2:1177951-1177970 MsG0280006385.01.T01:CDS 35.0%
TGAACGTAGGAAAGTCATAA+GGG + Chr2:1178861-1178880 None:intergenic 35.0%
TGGAAAATAGCAATAGCAGT+CGG + Chr2:1178664-1178683 None:intergenic 35.0%
TTGAACGTAGGAAAGTCATA+AGG + Chr2:1178862-1178881 None:intergenic 35.0%
TTGACTTCACCAAAACCAAT+TGG - Chr2:1178106-1178125 MsG0280006385.01.T01:CDS 35.0%
TTGAGTGAGGGTAATATAAG+AGG + Chr2:1178459-1178478 None:intergenic 35.0%
! TACGTTAGCAAGATTTGTTC+TGG - Chr2:1179220-1179239 MsG0280006385.01.T01:CDS 35.0%
!! TTGGTCTTTCCAATTGGTTT+TGG + Chr2:1178118-1178137 None:intergenic 35.0%
!!! AAATGTAGGGTTTTGAGTGA+GGG + Chr2:1178471-1178490 None:intergenic 35.0%
!!! AGGTCAAGATTTTGAAGCTT+AGG + Chr2:1178949-1178968 None:intergenic 35.0%
!!! GGTCAAGATTTTGAAGCTTA+GGG + Chr2:1178948-1178967 None:intergenic 35.0%
AGGAATCGTATTCAATGTCG+AGG + Chr2:1178227-1178246 None:intergenic 40.0%
AGGCAACTTGGAACAAATTC+CGG + Chr2:1179134-1179153 None:intergenic 40.0%
AGGTTTGATGTAAGGCAACT+TGG + Chr2:1179146-1179165 None:intergenic 40.0%
CATAGGAAACTTAGGGAGTA+TGG + Chr2:1178364-1178383 None:intergenic 40.0%
CCACAGTCAAATTGAACCAA+CGG + Chr2:1178425-1178444 None:intergenic 40.0%
CCCACATAGTGCAAGATTTA+AGG + Chr2:1179166-1179185 None:intergenic 40.0%
CTTCCATTCTTTCAAAGCGA+TGG - Chr2:1178055-1178074 MsG0280006385.01.T01:CDS 40.0%
GAATTTCTCGAAGCAGGAAT+AGG + Chr2:1178145-1178164 None:intergenic 40.0%
GATTCCTCTGAACTTCTCTT+AGG - Chr2:1178240-1178259 MsG0280006385.01.T01:intron 40.0%
GGTTAGTGCTCAACTATGAT+TGG - Chr2:1178893-1178912 MsG0280006385.01.T01:CDS 40.0%
TCAATTATCTCCATGCCCAA+GGG - Chr2:1179307-1179326 MsG0280006385.01.T01:CDS 40.0%
TGAAAGAATGGAAGTGACAC+AGG + Chr2:1178049-1178068 None:intergenic 40.0%
! AGATAGGATCAGCAGTTTTC+CGG - Chr2:1177978-1177997 MsG0280006385.01.T01:CDS 40.0%
! GGATTCTTGGTCTTTCCAAT+TGG + Chr2:1178124-1178143 None:intergenic 40.0%
! TTTGAAGCTTAGGGCAATGA+TGG + Chr2:1178939-1178958 None:intergenic 40.0%
!! AGTCCATCGCTTTGAAAGAA+TGG + Chr2:1178061-1178080 None:intergenic 40.0%
!! GGTTTTGGTGAAGTCAAGAT+CGG + Chr2:1178103-1178122 None:intergenic 40.0%
!! GTCGAGGATGAAAGTGTTAA+TGG + Chr2:1178211-1178230 None:intergenic 40.0%
!! GTTTTGGTGAAGTCAAGATC+GGG + Chr2:1178102-1178121 None:intergenic 40.0%
!!! CAAATGTAGGGTTTTGAGTG+AGG + Chr2:1178472-1178491 None:intergenic 40.0%
AACGGAGCTTGAGAACAACA+AGG + Chr2:1178407-1178426 None:intergenic 45.0%
ACGGAGCTTGAGAACAACAA+GGG + Chr2:1178406-1178425 None:intergenic 45.0%
ACGTAGGAAAGTCATAAGGG+TGG + Chr2:1178858-1178877 None:intergenic 45.0%
CCACTATATCAACCCATTCG+TGG + Chr2:1178281-1178300 None:intergenic 45.0%
CGAAGCAGGAATAGGATTCT+TGG + Chr2:1178137-1178156 None:intergenic 45.0%
GAAGACGAATTTCTCGAAGC+AGG + Chr2:1178151-1178170 None:intergenic 45.0%
GACATGTTGCAGAAACCCTT+GGG + Chr2:1179325-1179344 None:intergenic 45.0%
GAGAAGAGAGAATGCGAATC+AGG + Chr2:1178011-1178030 None:intergenic 45.0%
GTCAATTATCTCCATGCCCA+AGG - Chr2:1179306-1179325 MsG0280006385.01.T01:CDS 45.0%
TATCCTCATACCCCTCTTGA+CGG - Chr2:1178330-1178349 MsG0280006385.01.T01:intron 45.0%
TCCTCTGAACTTCTCTTAGG+TGG - Chr2:1178243-1178262 MsG0280006385.01.T01:intron 45.0%
TGACATGTTGCAGAAACCCT+TGG + Chr2:1179326-1179345 None:intergenic 45.0%
! CAAAGCGATGGACTCATCTT+TGG - Chr2:1178067-1178086 MsG0280006385.01.T01:CDS 45.0%
! TTGTTGTTCTCAAGCTCCGT+TGG - Chr2:1178406-1178425 MsG0280006385.01.T01:CDS 45.0%
!! CCACGAATGGGTTGATATAG+TGG - Chr2:1178278-1178297 MsG0280006385.01.T01:intron 45.0%
!! CCGTTGGTTCAATTTGACTG+TGG - Chr2:1178422-1178441 MsG0280006385.01.T01:CDS 45.0%
!! TTATCTTTATTATTAAAATA+AGG - Chr2:1179049-1179068 MsG0280006385.01.T01:CDS 5.0%
!!! ATTTTTAATTTTTAATTTTG+TGG - Chr2:1178782-1178801 MsG0280006385.01.T01:CDS 5.0%
ATGCGAATCAGGATGTCGTC+CGG + Chr2:1178000-1178019 None:intergenic 50.0%
ATGGTCTCTTCACCGTCAAG+AGG + Chr2:1178345-1178364 None:intergenic 50.0%
ATGTGGGACTTTGCATCTGC+AGG - Chr2:1179179-1179198 MsG0280006385.01.T01:CDS 50.0%
GCCACCTAAGAGAAGTTCAG+AGG + Chr2:1178247-1178266 None:intergenic 50.0%
TGGTCTCTTCACCGTCAAGA+GGG + Chr2:1178344-1178363 None:intergenic 50.0%
TTTCGACGTCGGCGATAGAT+AGG - Chr2:1177962-1177981 MsG0280006385.01.T01:CDS 50.0%
! AGTGACACAGGCTTGTTCGA+TGG + Chr2:1178037-1178056 None:intergenic 50.0%
! GAGGGGTATGAGGATAGAGA+TGG + Chr2:1178326-1178345 None:intergenic 50.0%
! GTGACACAGGCTTGTTCGAT+GGG + Chr2:1178036-1178055 None:intergenic 50.0%
GGTCTCTTCACCGTCAAGAG+GGG + Chr2:1178343-1178362 None:intergenic 55.0%
GTTGCAGAAACCCTTGGGCA+TGG + Chr2:1179320-1179339 None:intergenic 55.0%
! TCACCGTCAAGAGGGGTATG+AGG + Chr2:1178336-1178355 None:intergenic 55.0%
AGCTTCTCGCGAGCGCAAGA+CGG + Chr2:1178175-1178194 None:intergenic 60.0%
AGGTACGAGGCGACAACGAC+TGG - Chr2:1179069-1179088 MsG0280006385.01.T01:CDS 60.0%
GGTACGAGGCGACAACGACT+GGG - Chr2:1179070-1179089 MsG0280006385.01.T01:CDS 60.0%
TTGCGCTCGCGAGAAGCTGC+TGG - Chr2:1178177-1178196 MsG0280006385.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 1177946 1179373 1177946 ID=MsG0280006385.01;Name=MsG0280006385.01
Chr2 mRNA 1177946 1179373 1177946 ID=MsG0280006385.01.T01;Parent=MsG0280006385.01;Name=MsG0280006385.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|3|0|404
Chr2 exon 1178588 1179373 1178588 ID=MsG0280006385.01.T01:exon:17;Parent=MsG0280006385.01.T01
Chr2 exon 1178344 1178469 1178344 ID=MsG0280006385.01.T01:exon:16;Parent=MsG0280006385.01.T01
Chr2 exon 1177946 1178248 1177946 ID=MsG0280006385.01.T01:exon:15;Parent=MsG0280006385.01.T01
Chr2 CDS 1178588 1179373 1178588 ID=MsG0280006385.01.T01:cds;Parent=MsG0280006385.01.T01
Chr2 CDS 1178344 1178469 1178344 ID=MsG0280006385.01.T01:cds;Parent=MsG0280006385.01.T01
Chr2 CDS 1177946 1178248 1177946 ID=MsG0280006385.01.T01:cds;Parent=MsG0280006385.01.T01
Gene Sequence

>MsG0280006385.01.T01

ATGTCTAAGCAGAAAATTTCGACGTCGGCGATAGATAGGATCAGCAGTTTTCCGGACGACATCCTGATTCGCATTCTCTCTTCTCTTCCCATCGAACAAGCCTGTGTCACTTCCATTCTTTCAAAGCGATGGACTCATCTTTGGTGTTTTGTTCCCGATCTTGACTTCACCAAAACCAATTGGAAAGACCAAGAATCCTATTCCTGCTTCGAGAAATTCGTCTTCTCCGTCTTGCGCTCGCGAGAAGCTGCTGGTAATCAGTCCATTAACACTTTCATCCTCGACATTGAATACGATTCCTCTGAACTTCTCTTAGGTGGCATTAAAAATATCCACGAATGGGTTGATATAGTGGTCAAACGCAAAGTTCAAAATATCCATCTCTATCCTCATACCCCTCTTGACGGTGAAGAGACCATACTCCCTAAGTTTCCTATGAGTATCCTTAATTGTAAAACCCTTGTTGTTCTCAAGCTCCGTTGGTTCAATTTGACTGTGGTTAACGGTTTTCCTCTTATATTACCCTCACTCAAAACCCTACATTTGAAAGAGATTTACTTTTATCAACAACGTGATTTTATGATGCTTCTATATGGATGTCCAGTTCTTGATGATCTTCAACTATCTTATATATACATGACACGTCACACTCATCATTCTTTTGATGACTTTGAAAGCAGCTCAACGTTAAAAAAGTTGAACAGAGCAGATATTACCGACTGCTATTGCTATTTTCCAGTGAAATCACTTTCAAATTTGGAGTTTCTACGCATAAAACTATCTGAAGTTTACCACCCTTATGACTTTCCTACGTTCAACAATTTGACTTGGTTAGTGCTCAACTATGATTGGGATATAGTTGTTCAAGTGCTCCATCATTGCCCTAAGCTTCAAAATCTTGACCTATATCAGGTACGAGGCGACAACGACTGGGAGTATGAATATTTTCAAGAAAAAGAAAATTGGGGCAATCCGGAATTTGTTCCAAGTTGCCTTACATCAAACCTTAAATCTTGCACTATGTGGGACTTTGCATCTGCAGGCCAACAACGTAATCACATTACGTTAGCAAGATTTGTTCTGGAGAATGCAAGAGTTTTAGAAACTATGACAATCTGGAGCAAGAATAAACAATCTGAAATTGAAAGTCAATTATCTCCATGCCCAAGGGTTTCTGCAACATGTCAGCTTTCAATTTATTGTCAACATATATAA
Protein sequence

>MsG0280006385.01.T01

MSKQKISTSAIDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTNWKDQESYSCFEKFVFSVLRSREAAGNQSINTFILDIEYDSSELLLGGIKNIHEWVDIVVKRKVQNIHLYPHTPLDGEETILPKFPMSILNCKTLVVLKLRWFNLTVVNGFPLILPSLKTLHLKEIYFYQQRDFMMLLYGCPVLDDLQLSYIYMTRHTHHSFDDFESSSTLKKLNRADITDCYCYFPVKSLSNLEFLRIKLSEVYHPYDFPTFNNLTWLVLNYDWDIVVQVLHHCPKLQNLDLYQVRGDNDWEYEYFQEKENWGNPEFVPSCLTSNLKSCTMWDFASAGQQRNHITLARFVLENARVLETMTIWSKNKQSEIESQLSPCPRVSATCQLSIYCQHI*