AlfalfaGEDB | MsG0780037597.01

M. sativa cultivar ZhongmuNo.1 / MsG0780037597.01

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037597.01.T01	XP_013448167.1	83.92	199	32	0	90	288	177	375	6.71E-117	351

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037597.01.T01	Q9LQM1	37.288	118	71	1	179	296	308	422	6.01E-16	80.9

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037597.01.T01	A0A072TXG4	83.920	199	32	0	90	288	177	375	3.21e-117	351

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0780037597.01	MsG0880044282.01	PPI
MsG0880047562.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0780037597.01	MsG0580028665.01	PPI
MsG0480019463.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0680032369.01	PPI
MsG0480019459.01	MsG0780037597.01	PPI
MsG0780036908.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780037591.01	PPI
MsG0780037597.01	MsG0780038156.01	PPI
MsG0480022109.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780036062.01	PPI
MsG0780037597.01	MsG0880042352.01	PPI
MsG0780037562.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0080048094.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780037557.01	PPI
MsG0780037597.01	MsG0780037522.01	PPI
MsG0780037597.01	MsG0780037534.01	PPI
MsG0480019175.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780038469.01	PPI
MsG0780037597.01	MsG0780037596.01	PPI
MsG0780037597.01	MsG0780038463.01	PPI
MsG0780037597.01	MsG0780038466.01	PPI
MsG0780037597.01	MsG0380012429.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0780037597.01	MsG0480021723.01	PPI
MsG0780037597.01	MsG0380013669.01	PPI
MsG0480021507.01	MsG0780037597.01	PPI
MsG0680032766.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0380016761.01	PPI
MsG0780037597.01	MsG0580030111.01	PPI
MsG0780037597.01	MsG0780037066.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0780037597.01	MsG0380017416.01	PPI
MsG0680033026.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780037555.01	PPI
MsG0780037597.01	MsG0780040052.01	PPI
MsG0280006398.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0480022017.01	PPI
MsG0780037597.01	MsG0680032369.01	PPI
MsG0780037597.01	MsG0680031413.01	PPI
MsG0780037597.01	MsG0780038159.01	PPI
MsG0780037597.01	MsG0580028757.01	PPI
MsG0780037597.01	MsG0580025051.01	PPI
MsG0780037597.01	MsG0480022024.01	PPI
MsG0780037597.01	MsG0180005047.01	PPI
MsG0780037597.01	MsG0680032369.01	PPI
MsG0780037597.01	MsG0780037592.01	PPI
MsG0780037597.01	MsG0880045337.01	PPI
MsG0380017847.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0580028757.01	PPI
MsG0580028665.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780038466.01	PPI
MsG0780037597.01	MsG0780037524.01	PPI
MsG0780037596.01	MsG0780037597.01	PPI
MsG0680031417.01	MsG0780037597.01	PPI
MsG0680031415.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0880044888.01	PPI
MsG0780037597.01	MsG0880047230.01	PPI
MsG0780037597.01	MsG0380016794.01	PPI
MsG0780037597.01	MsG0680032369.01	PPI
MsG0780037597.01	MsG0680031415.01	PPI
MsG0780037597.01	MsG0280006373.01	PPI
MsG0780037597.01	MsG0380017414.01	PPI
MsG0680032353.01	MsG0780037597.01	PPI
MsG0280010541.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0880042360.01	PPI
MsG0380016794.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0680031419.01	PPI
MsG0780037597.01	MsG0780037596.01	PPI
MsG0480022013.01	MsG0780037597.01	PPI
MsG0380017413.01	MsG0780037597.01	PPI
MsG0780036907.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0280006326.01	PPI
MsG0780037597.01	MsG0680032369.01	PPI
MsG0780037597.01	MsG0180001689.01	PPI
MsG0780037597.01	MsG0480022109.01	PPI
MsG0780037597.01	MsG0580028665.01	PPI
MsG0780037597.01	MsG0280006373.01	PPI
MsG0580028638.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0580029293.01	PPI
MsG0780037597.01	MsG0280006396.01	PPI
MsG0780037597.01	MsG0780038157.01	PPI
MsG0780037597.01	MsG0480021722.01	PPI
MsG0480022007.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0480020252.01	PPI
MsG0780037597.01	MsG0580028665.01	PPI
MsG0780037597.01	MsG0380017846.01	PPI
MsG0480022014.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0280006373.01	PPI
MsG0680032369.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0280010925.01	PPI
MsG0780037597.01	MsG0380013675.01	PPI
MsG0780037597.01	MsG0280006385.01	PPI
MsG0780037597.01	MsG0380017847.01	PPI
MsG0780038462.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0780038471.01	PPI
MsG0780037597.01	MsG0780038468.01	PPI
MsG0680032369.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0780037597.01	MsG0480022009.01	PPI
MsG0780037597.01	MsG0680034526.01	PPI
MsG0780037597.01	MsG0580028665.01	PPI
MsG0780037597.01	MsG0580028638.01	PPI
MsG0780037597.01	MsG0480019471.01	PPI
MsG0780037597.01	MsG0480022015.01	PPI
MsG0780037597.01	MsG0580028665.01	PPI
MsG0780037597.01	MsG0780037571.01	PPI
MsG0780037597.01	MsG0680032353.01	PPI
MsG0780037597.01	MsG0880042381.01	PPI
MsG0580028665.01	MsG0780037597.01	PPI
MsG0780037597.01	MsG0580028652.01	PPI
MsG0280010911.01	MsG0780037597.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037597.01.T01	MTR_7g034115	83.920	199	32	0	90	288	177	375	8.13e-121	351
MsG0780037597.01.T01	MTR_1g041245	62.500	208	71	6	94	296	181	386	5.56e-75	234
MsG0780037597.01.T01	MTR_7g032380	53.365	208	70	3	89	296	176	356	1.21e-65	209
MsG0780037597.01.T01	MTR_7g033915	54.146	205	85	5	94	295	166	364	6.81e-63	202
MsG0780037597.01.T01	MTR_7g032370	53.589	209	86	5	89	296	154	352	7.91e-61	197
MsG0780037597.01.T01	MTR_7g033990	49.524	210	96	6	82	288	173	375	2.63e-55	184
MsG0780037597.01.T01	MTR_7g034120	49.057	212	93	7	88	296	109	308	5.53e-53	176
MsG0780037597.01.T01	MTR_7g056433	46.296	216	103	7	89	296	179	389	1.53e-49	169
MsG0780037597.01.T01	MTR_7g098510	37.262	263	134	9	53	296	141	391	5.69e-39	141
MsG0780037597.01.T01	MTR_3g087260	40.826	218	118	5	85	295	243	456	2.09e-38	141
MsG0780037597.01.T01	MTR_5g008920	40.476	210	117	4	91	296	176	381	2.53e-38	139
MsG0780037597.01.T01	MTR_7g098480	39.640	222	118	8	82	295	175	388	8.48e-37	137
MsG0780037597.01.T01	MTR_8g085430	65.385	104	31	1	186	284	213	316	1.46e-36	133
MsG0780037597.01.T01	MTR_7g098570	38.095	252	137	9	53	291	143	388	7.75e-36	134
MsG0780037597.01.T01	MTR_5g013500	40.625	224	112	9	91	296	145	365	2.45e-35	131
MsG0780037597.01.T01	MTR_7g115270	39.189	222	119	6	85	293	181	399	3.39e-35	131
MsG0780037597.01.T01	MTR_3g036250	35.060	251	140	5	48	293	131	363	4.49e-35	130
MsG0780037597.01.T01	MTR_2g020180	48.227	141	58	4	158	296	88	215	5.01e-35	126
MsG0780037597.01.T01	MTR_7g081290	48.611	144	64	6	157	296	119	256	5.25e-35	127
MsG0780037597.01.T01	MTR_7g088260	37.788	217	119	9	89	296	253	462	3.06e-34	129
MsG0780037597.01.T01	MTR_3g082890	43.617	188	94	6	114	296	304	484	5.69e-34	129
MsG0780037597.01.T01	MTR_5g008950	39.437	213	114	8	91	296	161	365	1.34e-33	126
MsG0780037597.01.T01	MTR_3g108150	41.204	216	116	7	89	295	173	386	6.65e-33	125
MsG0780037597.01.T01	MTR_3g109982	40.670	209	110	8	90	289	266	469	1.34e-32	127
MsG0780037597.01.T01	MTR_0543s0010	37.850	214	119	6	89	295	243	449	2.01e-32	124
MsG0780037597.01.T01	MTR_5g012840	54.386	114	49	2	183	296	208	318	8.50e-31	117
MsG0780037597.01.T01	MTR_3g115430	49.153	118	54	3	180	296	13	125	1.74e-30	111
MsG0780037597.01.T01	MTR_7g056020	39.623	212	116	6	85	289	161	367	2.16e-30	120
MsG0780037597.01.T01	MTR_3g082890	37.668	223	94	7	114	296	224	441	6.00e-29	115
MsG0780037597.01.T01	MTR_7g056430	38.389	211	114	7	94	290	151	359	1.06e-28	116
MsG0780037597.01.T01	MTR_7g056420	38.389	211	114	7	94	290	151	359	1.15e-28	116
MsG0780037597.01.T01	MTR_3g108560	38.571	210	118	6	94	295	182	388	1.37e-28	113
MsG0780037597.01.T01	MTR_0492s0020	36.634	202	114	6	89	283	243	437	2.02e-27	110
MsG0780037597.01.T01	MTR_3g107100	33.476	233	126	10	85	296	174	398	9.64e-24	100
MsG0780037597.01.T01	MTR_5g007410	33.790	219	122	8	91	293	194	405	1.21e-23	100
MsG0780037597.01.T01	MTR_4g080610	36.937	222	115	11	90	295	144	356	2.83e-23	98.2
MsG0780037597.01.T01	MTR_3g467400	34.247	219	97	8	90	296	184	367	3.45e-23	98.2
MsG0780037597.01.T01	MTR_3g107160	33.486	218	118	7	91	296	181	383	2.23e-22	96.3
MsG0780037597.01.T01	MTR_7g083740	33.478	230	115	10	84	295	157	366	2.66e-22	95.9
MsG0780037597.01.T01	MTR_3g040700	32.420	219	119	6	48	257	169	367	4.55e-22	95.9
MsG0780037597.01.T01	MTR_6g040270	31.839	223	129	9	84	294	168	379	8.12e-22	94.4
MsG0780037597.01.T01	MTR_5g054920	33.500	200	106	7	95	280	7	193	1.10e-21	90.5
MsG0780037597.01.T01	MTR_5g073420	32.394	213	126	7	88	295	180	379	1.12e-21	94.4
MsG0780037597.01.T01	MTR_3g107940	33.659	205	111	8	99	288	11	205	3.85e-21	92.0
MsG0780037597.01.T01	MTR_2g007450	30.932	236	119	10	89	296	202	421	4.34e-21	92.8
MsG0780037597.01.T01	MTR_5g039450	31.556	225	119	7	86	293	149	355	4.64e-21	92.0
MsG0780037597.01.T01	MTR_5g008910	28.852	305	154	12	43	296	10	302	9.75e-21	90.5
MsG0780037597.01.T01	MTR_7g034110	39.062	128	72	3	159	286	211	332	1.20e-20	90.9
MsG0780037597.01.T01	MTR_5g058000	35.000	220	120	10	85	295	169	374	1.26e-20	91.3
MsG0780037597.01.T01	MTR_7g007080	33.796	216	119	8	90	294	175	377	1.78e-20	90.9
MsG0780037597.01.T01	MTR_3g105060	31.818	220	128	7	82	296	171	373	1.91e-20	90.5
MsG0780037597.01.T01	MTR_1g066830	31.050	219	130	8	91	295	175	386	3.07e-20	90.1
MsG0780037597.01.T01	MTR_7g056280	28.571	238	137	8	78	293	344	570	4.51e-20	90.5
MsG0780037597.01.T01	MTR_3g107120	31.200	250	143	9	61	293	151	388	4.83e-20	89.7
MsG0780037597.01.T01	MTR_2g007400	32.159	227	119	11	89	296	193	403	1.18e-19	88.6
MsG0780037597.01.T01	MTR_3g023630	33.810	210	128	8	89	296	173	373	1.19e-19	88.2
MsG0780037597.01.T01	MTR_7g056277	33.019	212	125	9	90	295	427	627	1.54e-19	89.0
MsG0780037597.01.T01	MTR_1089s0010	28.636	220	142	6	84	296	168	379	1.58e-19	88.2
MsG0780037597.01.T01	MTR_2g007550	38.519	135	65	4	161	293	214	332	2.03e-19	87.4
MsG0780037597.01.T01	MTR_5g058100	33.333	216	119	8	94	295	179	383	2.32e-19	87.8
MsG0780037597.01.T01	MTR_6g022520	32.599	227	125	10	86	295	97	312	5.19e-19	85.9
MsG0780037597.01.T01	MTR_1g043170	45.349	86	43	2	212	296	6	88	5.40e-19	80.1
MsG0780037597.01.T01	MTR_2g036470	33.953	215	123	7	94	295	187	395	7.72e-19	86.3
MsG0780037597.01.T01	MTR_3g108140	45.455	99	52	2	199	295	49	147	1.15e-18	82.0
MsG0780037597.01.T01	MTR_1g107385	32.143	224	122	10	86	294	213	421	1.18e-18	85.9
MsG0780037597.01.T01	MTR_7g026500	31.604	212	128	5	93	295	191	394	1.33e-18	85.5
MsG0780037597.01.T01	MTR_4g096730	50.617	81	36	2	217	296	12	89	1.97e-18	79.3
MsG0780037597.01.T01	MTR_7g075820	31.308	214	126	8	88	294	193	392	2.88e-18	84.7
MsG0780037597.01.T01	MTR_7g056287	30.332	211	132	6	90	295	171	371	5.63e-18	83.6
MsG0780037597.01.T01	MTR_5g045170	31.878	229	119	8	86	294	178	389	7.84e-18	83.2
MsG0780037597.01.T01	MTR_1g108800	34.884	215	112	9	94	294	140	340	8.04e-18	82.8
MsG0780037597.01.T01	MTR_5g039470	32.143	196	101	7	85	260	144	327	1.25e-17	82.0
MsG0780037597.01.T01	MTR_2g007610	37.662	154	76	6	146	294	11	149	1.52e-17	79.0
MsG0780037597.01.T01	MTR_6g045333	30.233	258	149	9	59	295	198	445	1.89e-17	82.4
MsG0780037597.01.T01	MTR_3g099830	31.739	230	118	10	85	294	162	372	7.02e-17	80.5
MsG0780037597.01.T01	MTR_2g007360	29.787	235	124	11	86	294	153	372	7.75e-17	80.1
MsG0780037597.01.T01	MTR_0009s0080	33.163	196	106	8	85	264	181	367	8.23e-17	80.5
MsG0780037597.01.T01	MTR_8g014210	37.273	110	66	1	187	296	125	231	9.23e-17	78.2
MsG0780037597.01.T01	MTR_1g085120	29.333	225	136	8	86	296	256	471	1.17e-16	80.1
MsG0780037597.01.T01	MTR_1g085120	29.333	225	136	8	86	296	331	546	1.48e-16	80.1
MsG0780037597.01.T01	MTR_6g022500	31.556	225	127	11	86	296	265	476	2.08e-16	79.3
MsG0780037597.01.T01	MTR_3g026920	31.441	229	113	11	89	293	194	402	2.12e-16	79.3
MsG0780037597.01.T01	MTR_4g039440	30.303	231	130	10	86	296	193	412	3.66e-16	78.6
MsG0780037597.01.T01	MTR_7g114710	32.857	210	110	7	92	296	181	364	6.17e-16	77.4
MsG0780037597.01.T01	MTR_1g053025	27.313	227	123	8	91	293	178	386	1.11e-15	77.0
MsG0780037597.01.T01	MTR_8g058970	39.474	114	65	2	186	296	365	477	1.72e-15	76.6
MsG0780037597.01.T01	MTR_2g005990	30.531	226	127	11	85	294	182	393	1.95e-15	76.3
MsG0780037597.01.T01	MTR_3g071850	30.317	221	125	8	91	292	195	405	2.51e-15	76.6
MsG0780037597.01.T01	MTR_8g077460	31.915	141	88	3	156	296	243	375	2.76e-15	75.9
MsG0780037597.01.T01	MTR_5g031970	30.841	214	122	8	84	294	164	354	2.81e-15	75.5
MsG0780037597.01.T01	MTR_3g113785	45.882	85	36	2	178	254	10	92	6.72e-15	69.3
MsG0780037597.01.T01	MTR_1377s0010	33.588	131	78	4	136	264	4	127	7.37e-15	70.5
MsG0780037597.01.T01	MTR_2g007090	32.110	218	103	11	91	295	108	293	9.22e-15	73.6
MsG0780037597.01.T01	MTR_5g073370	30.806	211	126	7	94	294	178	378	1.41e-14	73.6
MsG0780037597.01.T01	MTR_8g062310	33.562	146	87	5	153	296	291	428	2.06e-14	73.6
MsG0780037597.01.T01	MTR_3g094980	39.286	84	48	1	184	264	34	117	2.25e-14	70.1
MsG0780037597.01.T01	MTR_6g029350	29.808	208	126	7	94	294	2	196	2.26e-14	71.6
MsG0780037597.01.T01	MTR_5g083890	32.447	188	101	8	94	264	196	374	2.44e-14	73.6
MsG0780037597.01.T01	MTR_5g024060	33.333	132	78	5	157	286	75	198	2.80e-14	71.6
MsG0780037597.01.T01	MTR_7g060470	27.897	233	129	9	90	295	172	392	3.63e-14	72.4
MsG0780037597.01.T01	MTR_8g058965	36.232	138	77	4	162	296	327	456	4.25e-14	72.8
MsG0780037597.01.T01	MTR_7g034090	34.247	146	84	5	154	295	174	311	4.58e-14	72.4
MsG0780037597.01.T01	MTR_2g008310	30.093	216	123	10	94	296	171	371	4.63e-13	69.3
MsG0780037597.01.T01	MTR_5g039490	32.039	206	108	7	94	295	198	375	8.46e-13	68.6
MsG0780037597.01.T01	MTR_8g469020	35.507	138	78	5	162	296	322	451	9.32e-13	68.6
MsG0780037597.01.T01	MTR_5g045510	28.311	219	116	8	91	294	178	370	1.01e-12	68.2
MsG0780037597.01.T01	MTR_8g062300	36.496	137	78	4	162	296	348	477	1.32e-12	68.2
MsG0780037597.01.T01	MTR_8g014260	29.339	242	136	11	76	296	224	451	3.34e-12	67.0
MsG0780037597.01.T01	MTR_5g033200	29.341	167	103	5	121	282	12	168	3.73e-12	64.3
MsG0780037597.01.T01	MTR_7g022105	30.137	146	93	3	124	264	252	393	4.85e-12	66.2
MsG0780037597.01.T01	MTR_3g071790	28.177	181	112	6	91	258	27	202	5.05e-12	64.3
MsG0780037597.01.T01	MTR_5g092960	34.513	113	69	2	186	295	351	461	6.62e-12	65.9
MsG0780037597.01.T01	MTR_5g063950	35.398	113	70	2	184	293	247	359	8.53e-12	65.5
MsG0780037597.01.T01	MTR_4g098590	39.175	97	54	2	184	275	271	367	9.29e-12	65.5
MsG0780037597.01.T01	MTR_8g014160	43.421	76	43	0	221	296	350	425	1.37e-11	65.1
MsG0780037597.01.T01	MTR_1g053050	38.750	80	45	1	214	293	37	112	2.03e-11	60.5
MsG0780037597.01.T01	MTR_7g021990	28.877	187	111	6	124	296	251	429	2.68e-11	63.9
MsG0780037597.01.T01	MTR_7g021950	28.962	183	116	5	124	296	251	429	3.09e-11	63.9
MsG0780037597.01.T01	MTR_8g062010	33.577	137	82	4	162	296	301	430	3.36e-11	63.9
MsG0780037597.01.T01	MTR_6g022360	26.250	240	149	9	47	267	148	378	6.64e-11	62.8
MsG0780037597.01.T01	MTR_3g106960	33.571	140	83	5	133	267	40	174	8.43e-11	61.2
MsG0780037597.01.T01	MTR_8g070950	33.577	137	82	4	162	296	305	434	9.05e-11	62.4
MsG0780037597.01.T01	MTR_2g086020	40.000	110	62	3	189	296	208	315	9.29e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037597.01.T01	AT1G32375	37.288	118	71	1	179	296	308	422	6.13e-17	80.9
MsG0780037597.01.T01	AT1G32375	37.288	118	71	1	179	296	308	422	6.13e-17	80.9
MsG0780037597.01.T01	AT4G26340	36.134	119	71	2	182	296	302	419	3.72e-13	69.7
MsG0780037597.01.T01	AT3G26920	26.000	200	144	3	99	295	141	339	8.08e-11	62.4
MsG0780037597.01.T01	AT3G26920	26.000	200	144	3	99	295	141	339	8.08e-11	62.4

Find 68 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCTACCTTTCTTAATTTA+AGG	0.075190	7:+29070795	MsG0780037597.01.T01:CDS
CGAAGTTATCTCTGTGTCTA+AGG	0.263124	7:+29071244	MsG0780037597.01.T01:CDS
TTTAAGGATGAAGAGTTTAA+TGG	0.273530	7:+29070564	MsG0780037597.01.T01:CDS
ATGTTCTAAGCTCGGATAAA+AGG	0.286459	7:-29071086	None:intergenic
CTTAGAACATGTTCACTTGT+AGG	0.291051	7:+29071099	MsG0780037597.01.T01:CDS
TCTGAAGCTTAGGACAGTTT+TGG	0.308251	7:-29070886	None:intergenic
TGAGAGAATGTGGCAGATAA+GGG	0.328601	7:-29070285	None:intergenic
TGTTCACTTGTAGGTTATAA+AGG	0.338650	7:+29071108	MsG0780037597.01.T01:CDS
ATGAGAGAATGTGGCAGATA+AGG	0.340996	7:-29070286	None:intergenic
GTAGGAACTTGGTAACAATA+AGG	0.345442	7:-29070779	None:intergenic
TATTTCAACTTACAAATGAT+TGG	0.369456	7:+29070831	MsG0780037597.01.T01:CDS
TTAGAGTATTTGAGAACATA+TGG	0.381970	7:+29070525	MsG0780037597.01.T01:CDS
GTTTAATGGTTTACTCGAAT+TGG	0.389883	7:+29070578	MsG0780037597.01.T01:CDS
ATGTGGCAGATAAGGGAGTC+TGG	0.393799	7:-29070278	None:intergenic
GAGATAACTTCGTAAGCATT+TGG	0.407043	7:-29071233	None:intergenic
CAACTTACAAATGATTGGCT+TGG	0.414893	7:+29070836	MsG0780037597.01.T01:CDS
AACTTACAAATGATTGGCTT+GGG	0.419642	7:+29070837	MsG0780037597.01.T01:CDS
CAAATGATTGGCTTGGGAAG+TGG	0.422379	7:+29070843	MsG0780037597.01.T01:CDS
TTTGAACATTCCATTTGCTT+GGG	0.422936	7:+29070629	MsG0780037597.01.T01:CDS
ATGAAGTTGGTGATGGTGAT+TGG	0.433874	7:+29071037	MsG0780037597.01.T01:CDS
GTATTGGCGACGCGGGGTCA+CGG	0.435838	7:-29070457	None:intergenic
ATGATAAGATTCTGAAGCTT+AGG	0.448568	7:-29070896	None:intergenic
TAGGAACTTGGTAACAATAA+GGG	0.467682	7:-29070778	None:intergenic
TAGAGAGAAATGAGAGAATG+TGG	0.469495	7:-29070295	None:intergenic
GCATTACAAACCCAAGCAAA+TGG	0.470644	7:-29070639	None:intergenic
TTTCTTATGAACCTTCTCAA+TGG	0.489980	7:+29070492	MsG0780037597.01.T01:CDS
CAAGCATCCTCTCTAAAAGA+TGG	0.496526	7:+29070336	MsG0780037597.01.T01:CDS
GCTTGTCGCAGCAGATTGCT+TGG	0.500979	7:-29070318	None:intergenic
TATTGGCGACGCGGGGTCAC+GGG	0.501176	7:-29070456	None:intergenic
ATTGGCTTGGGAAGTGGAAG+TGG	0.504604	7:+29070849	MsG0780037597.01.T01:CDS
AAAGTTTCTATTCACAAGGC+TGG	0.506645	7:+29070662	MsG0780037597.01.T01:CDS
AGTTGGAATGGAACGTGGGC+AGG	0.509127	7:-29070234	None:intergenic
TCTACGTATGAAAATGAAGT+TGG	0.511663	7:+29071024	MsG0780037597.01.T01:CDS
CATGCGCCTTAAATTAAGAA+AGG	0.518613	7:-29070801	None:intergenic
GAAAGTCGGAAGGATTGTAT+TGG	0.523285	7:-29070473	None:intergenic
GATTCTGTCCACAGTTGGAA+TGG	0.525310	7:-29070246	None:intergenic
AATTAAGAAAGGTAGGAACT+TGG	0.529827	7:-29070790	None:intergenic
AAGGATTGTATTGGCGACGC+GGG	0.530751	7:-29070464	None:intergenic
GAAGTTATCTCTGTGTCTAA+GGG	0.532567	7:+29071245	MsG0780037597.01.T01:CDS
GCAGATAAGGGAGTCTGGGA+GGG	0.541155	7:-29070273	None:intergenic
GTTCTCAAATACTCTAAAGC+GGG	0.549602	7:-29070519	None:intergenic
TTCTTAATTTAAGGCGCATG+AGG	0.552943	7:+29070804	MsG0780037597.01.T01:CDS
TGTGGCAGATAAGGGAGTCT+GGG	0.553289	7:-29070277	None:intergenic
GCGCTGATTCTGTCCACAGT+TGG	0.553987	7:-29070251	None:intergenic
AAGTGAACATGTTCTAAGCT+CGG	0.558679	7:-29071094	None:intergenic
CGCCTTAAATTAAGAAAGGT+AGG	0.559806	7:-29070797	None:intergenic
GTGAGGAGTGAGAGCCACAA+TGG	0.564390	7:-29070362	None:intergenic
GAGAAGGTTCATAAGAAAGT+CGG	0.582136	7:-29070487	None:intergenic
TCCACAGTTGGAATGGAACG+TGG	0.585863	7:-29070239	None:intergenic
CTAAAAGATGGAAACCATTG+TGG	0.588189	7:+29070348	MsG0780037597.01.T01:CDS
TTTATTGATATCAACTGGTG+AGG	0.591388	7:-29071205	None:intergenic
GATCATCGAAGTCGAGAGTG+AGG	0.603114	7:-29070379	None:intergenic
GGCAGATAAGGGAGTCTGGG+AGG	0.604737	7:-29070274	None:intergenic
AGTTGGTGATGGTGATTGGA+TGG	0.607749	7:+29071041	MsG0780037597.01.T01:CDS
TATGAAAATGAAGTTGGTGA+TGG	0.614060	7:+29071030	MsG0780037597.01.T01:CDS
TGTTCTCAAATACTCTAAAG+CGG	0.620283	7:-29070520	None:intergenic
ATGCAAAGTTTCTATTCACA+AGG	0.621436	7:+29070658	MsG0780037597.01.T01:CDS
AGGCAGTAATTGTCATGGTG+TGG	0.624800	7:-29071185	None:intergenic
AAGCGGGACAACCATTGAGA+AGG	0.630596	7:-29070503	None:intergenic
CCCACGTTCCATTCCAACTG+TGG	0.631604	7:+29070238	MsG0780037597.01.T01:CDS
GAAGGATTGTATTGGCGACG+CGG	0.634625	7:-29070465	None:intergenic
GTACTCTGCAAACTGAAACT+CGG	0.635426	7:-29071139	None:intergenic
AAGTTATCTCTGTGTCTAAG+GGG	0.663220	7:+29071246	MsG0780037597.01.T01:CDS
AGGATTGTATTGGCGACGCG+GGG	0.670369	7:-29070463	None:intergenic
TCAGAATCTTATCATTCACG+AGG	0.687307	7:+29070904	MsG0780037597.01.T01:CDS
AGGTTCATAAGAAAGTCGGA+AGG	0.693335	7:-29070483	None:intergenic
TGGTGAGGCAGTAATTGTCA+TGG	0.701371	7:-29071190	None:intergenic
CCACAGTTGGAATGGAACGT+GGG	0.707774	7:-29070238	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATGTTAAATTAAAACAAAT+TGG	+	Chr7:29070710-29070729	MsG0780037597.01.T01:intron	10.0%
!!!	ATTTTTTTTTTGTTGTTAAC+AGG	+	Chr7:29070999-29071018	MsG0780037597.01.T01:intron	15.0%
!!	AGAAAAAGTAATCAAAATGA+TGG	-	Chr7:29070976-29070995	None:intergenic	20.0%
!!	TATTTCAACTTACAAATGAT+TGG	+	Chr7:29070831-29070850	MsG0780037597.01.T01:CDS	20.0%
!	TTCCTACCTTTCTTAATTTA+AGG	+	Chr7:29070795-29070814	MsG0780037597.01.T01:CDS	25.0%
!	TTTAAGGATGAAGAGTTTAA+TGG	+	Chr7:29070564-29070583	MsG0780037597.01.T01:CDS	25.0%
!!	TTAGAGTATTTGAGAACATA+TGG	+	Chr7:29070525-29070544	MsG0780037597.01.T01:CDS	25.0%
!!!	AAAAGGCATTTTGAAACAAT+TGG	-	Chr7:29071072-29071091	None:intergenic	25.0%
!!!	TGCTTTTTATTGATATCAAC+TGG	-	Chr7:29071213-29071232	None:intergenic	25.0%
	AACATTATGTTAGAAAGCCA+TGG	-	Chr7:29070696-29070715	None:intergenic	30.0%
	AATTAAGAAAGGTAGGAACT+TGG	-	Chr7:29070793-29070812	None:intergenic	30.0%
	ATGCAAAGTTTCTATTCACA+AGG	+	Chr7:29070658-29070677	MsG0780037597.01.T01:CDS	30.0%
	GTTTAATGGTTTACTCGAAT+TGG	+	Chr7:29070578-29070597	MsG0780037597.01.T01:CDS	30.0%
	TCTACGTATGAAAATGAAGT+TGG	+	Chr7:29071024-29071043	MsG0780037597.01.T01:CDS	30.0%
	TGTTCACTTGTAGGTTATAA+AGG	+	Chr7:29071108-29071127	MsG0780037597.01.T01:CDS	30.0%
	TTTATTGATATCAACTGGTG+AGG	-	Chr7:29071208-29071227	None:intergenic	30.0%
	TTTCTTATGAACCTTCTCAA+TGG	+	Chr7:29070492-29070511	MsG0780037597.01.T01:CDS	30.0%
	TTTGAACATTCCATTTGCTT+GGG	+	Chr7:29070629-29070648	MsG0780037597.01.T01:CDS	30.0%
!	TAGGAACTTGGTAACAATAA+GGG	-	Chr7:29070781-29070800	None:intergenic	30.0%
!	TGTTCTCAAATACTCTAAAG+CGG	-	Chr7:29070523-29070542	None:intergenic	30.0%
!	TTTTGAACATTCCATTTGCT+TGG	+	Chr7:29070628-29070647	MsG0780037597.01.T01:CDS	30.0%
!!	AACTTACAAATGATTGGCTT+GGG	+	Chr7:29070837-29070856	MsG0780037597.01.T01:CDS	30.0%
!!	ATGATAAGATTCTGAAGCTT+AGG	-	Chr7:29070899-29070918	None:intergenic	30.0%
!!	TATGAAAATGAAGTTGGTGA+TGG	+	Chr7:29071030-29071049	MsG0780037597.01.T01:CDS	30.0%
	AAAGTTTCTATTCACAAGGC+TGG	+	Chr7:29070662-29070681	MsG0780037597.01.T01:CDS	35.0%
	AAGTTATCTCTGTGTCTAAG+GGG	+	Chr7:29071246-29071265	MsG0780037597.01.T01:CDS	35.0%
	CATGCGCCTTAAATTAAGAA+AGG	-	Chr7:29070804-29070823	None:intergenic	35.0%
	CGCCTTAAATTAAGAAAGGT+AGG	-	Chr7:29070800-29070819	None:intergenic	35.0%
	CTAAAAGATGGAAACCATTG+TGG	+	Chr7:29070348-29070367	MsG0780037597.01.T01:CDS	35.0%
	CTTAGAACATGTTCACTTGT+AGG	+	Chr7:29071099-29071118	MsG0780037597.01.T01:CDS	35.0%
	GAAGTTATCTCTGTGTCTAA+GGG	+	Chr7:29071245-29071264	MsG0780037597.01.T01:CDS	35.0%
	GAGAAGGTTCATAAGAAAGT+CGG	-	Chr7:29070490-29070509	None:intergenic	35.0%
	GAGATAACTTCGTAAGCATT+TGG	-	Chr7:29071236-29071255	None:intergenic	35.0%
	TAGAGAGAAATGAGAGAATG+TGG	-	Chr7:29070298-29070317	None:intergenic	35.0%
	TCAGAATCTTATCATTCACG+AGG	+	Chr7:29070904-29070923	MsG0780037597.01.T01:CDS	35.0%
!	AAGTGAACATGTTCTAAGCT+CGG	-	Chr7:29071097-29071116	None:intergenic	35.0%
!	ATGTTCTAAGCTCGGATAAA+AGG	-	Chr7:29071089-29071108	None:intergenic	35.0%
!	CAACTTACAAATGATTGGCT+TGG	+	Chr7:29070836-29070855	MsG0780037597.01.T01:CDS	35.0%
!	GTAGGAACTTGGTAACAATA+AGG	-	Chr7:29070782-29070801	None:intergenic	35.0%
!	TTCTTAATTTAAGGCGCATG+AGG	+	Chr7:29070804-29070823	MsG0780037597.01.T01:CDS	35.0%
!	TTTAGTGCAGTCTCGTTTTA+AGG	+	Chr7:29070548-29070567	MsG0780037597.01.T01:CDS	35.0%
!!	ATGGTTTCCATCTTTTAGAG+AGG	-	Chr7:29070346-29070365	None:intergenic	35.0%
!!	GTTCTCAAATACTCTAAAGC+GGG	-	Chr7:29070522-29070541	None:intergenic	35.0%
!!!	AGGCATTTTGAAACAATTGG+TGG	-	Chr7:29071069-29071088	None:intergenic	35.0%
!!!	GGCATTTTGAAACAATTGGT+GGG	-	Chr7:29071068-29071087	None:intergenic	35.0%
	AGGTTCATAAGAAAGTCGGA+AGG	-	Chr7:29070486-29070505	None:intergenic	40.0%
	ATGAGAGAATGTGGCAGATA+AGG	-	Chr7:29070289-29070308	None:intergenic	40.0%
	CGAAGTTATCTCTGTGTCTA+AGG	+	Chr7:29071244-29071263	MsG0780037597.01.T01:CDS	40.0%
	GAAAGTCGGAAGGATTGTAT+TGG	-	Chr7:29070476-29070495	None:intergenic	40.0%
	GCATTACAAACCCAAGCAAA+TGG	-	Chr7:29070642-29070661	None:intergenic	40.0%
	GTACTCTGCAAACTGAAACT+CGG	-	Chr7:29071142-29071161	None:intergenic	40.0%
	TGAGAGAATGTGGCAGATAA+GGG	-	Chr7:29070288-29070307	None:intergenic	40.0%
!	CAAGCATCCTCTCTAAAAGA+TGG	+	Chr7:29070336-29070355	MsG0780037597.01.T01:CDS	40.0%
!!	ATGAAGTTGGTGATGGTGAT+TGG	+	Chr7:29071037-29071056	MsG0780037597.01.T01:CDS	40.0%
!!	TCTGAAGCTTAGGACAGTTT+TGG	-	Chr7:29070889-29070908	None:intergenic	40.0%
	AGGCAGTAATTGTCATGGTG+TGG	-	Chr7:29071188-29071207	None:intergenic	45.0%
	CAAGGCTGGTATGAATACCA+TGG	+	Chr7:29070676-29070695	MsG0780037597.01.T01:intron	45.0%
	GATTCTGTCCACAGTTGGAA+TGG	-	Chr7:29070249-29070268	None:intergenic	45.0%
	TGGTGAGGCAGTAATTGTCA+TGG	-	Chr7:29071193-29071212	None:intergenic	45.0%
!!	AGTTGGTGATGGTGATTGGA+TGG	+	Chr7:29071041-29071060	MsG0780037597.01.T01:CDS	45.0%
!!	CAAATGATTGGCTTGGGAAG+TGG	+	Chr7:29070843-29070862	MsG0780037597.01.T01:CDS	45.0%
	AAGCGGGACAACCATTGAGA+AGG	-	Chr7:29070506-29070525	None:intergenic	50.0%
	ATGTGGCAGATAAGGGAGTC+TGG	-	Chr7:29070281-29070300	None:intergenic	50.0%
	CCACAGTTGGAATGGAACGT+GGG	-	Chr7:29070241-29070260	None:intergenic	50.0%
	GATCATCGAAGTCGAGAGTG+AGG	-	Chr7:29070382-29070401	None:intergenic	50.0%
	TCCACAGTTGGAATGGAACG+TGG	-	Chr7:29070242-29070261	None:intergenic	50.0%
	TGTGGCAGATAAGGGAGTCT+GGG	-	Chr7:29070280-29070299	None:intergenic	50.0%
!	AAGGATTGTATTGGCGACGC+GGG	-	Chr7:29070467-29070486	None:intergenic	50.0%
!	GAAGGATTGTATTGGCGACG+CGG	-	Chr7:29070468-29070487	None:intergenic	50.0%
!!	ATTGGCTTGGGAAGTGGAAG+TGG	+	Chr7:29070849-29070868	MsG0780037597.01.T01:CDS	50.0%
	AGTTGGAATGGAACGTGGGC+AGG	-	Chr7:29070237-29070256	None:intergenic	55.0%
	CCCACGTTCCATTCCAACTG+TGG	+	Chr7:29070238-29070257	MsG0780037597.01.T01:CDS	55.0%
	GCAGATAAGGGAGTCTGGGA+GGG	-	Chr7:29070276-29070295	None:intergenic	55.0%
	GCTTGTCGCAGCAGATTGCT+TGG	-	Chr7:29070321-29070340	None:intergenic	55.0%
	GTGAGGAGTGAGAGCCACAA+TGG	-	Chr7:29070365-29070384	None:intergenic	55.0%
!	AGGATTGTATTGGCGACGCG+GGG	-	Chr7:29070466-29070485	None:intergenic	55.0%
!!	GCGCTGATTCTGTCCACAGT+TGG	-	Chr7:29070254-29070273	None:intergenic	55.0%
	GGCAGATAAGGGAGTCTGGG+AGG	-	Chr7:29070277-29070296	None:intergenic	60.0%
	TATTGGCGACGCGGGGTCAC+GGG	-	Chr7:29070459-29070478	None:intergenic	65.0%
!	GTATTGGCGACGCGGGGTCA+CGG	-	Chr7:29070460-29070479	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	29070225	29071299	29070225	ID=MsG0780037597.01;Name=MsG0780037597.01
Chr7	mRNA	29070225	29071299	29070225	ID=MsG0780037597.01.T01;Parent=MsG0780037597.01;Name=MsG0780037597.01.T01;_AED=0.47;_eAED=0.63;_QI=0\|0\|0\|1\|1\|1\|3\|0\|296
Chr7	exon	29070225	29070683	29070225	ID=MsG0780037597.01.T01:exon:13499;Parent=MsG0780037597.01.T01
Chr7	exon	29070773	29070925	29070773	ID=MsG0780037597.01.T01:exon:13500;Parent=MsG0780037597.01.T01
Chr7	exon	29071021	29071299	29071021	ID=MsG0780037597.01.T01:exon:13501;Parent=MsG0780037597.01.T01
Chr7	CDS	29070225	29070683	29070225	ID=MsG0780037597.01.T01:cds;Parent=MsG0780037597.01.T01
Chr7	CDS	29070773	29070925	29070773	ID=MsG0780037597.01.T01:cds;Parent=MsG0780037597.01.T01
Chr7	CDS	29071021	29071299	29071021	ID=MsG0780037597.01.T01:cds;Parent=MsG0780037597.01.T01

Gene Sequence

>MsG0780037597.01.T01

TTGCGATGTCCTGCCCACGTTCCATTCCAACTGTGGACAGAATCAGCGCCCTCCCAGACTCCCTTATCTGCCACATTCTCTCATTTCTCTCTACCAAGCAATCTGCTGCGACAAGCATCCTCTCTAAAAGATGGAAACCATTGTGGCTCTCACTCCTCACTCTCGACTTCGATGATCATGACTTTACAAATTTCAACACTTTTCGACTTTTCTTCTACTCAGTCATGCTCACCCGTGACCCCGCGTCGCCAATACAATCCTTCCGACTTTCTTATGAACCTTCTCAATGGTTGTCCCGCTTTAGAGTATTTGAGAACATATGGTTTAGTGCAGTCTCGTTTTAAGGATGAAGAGTTTAATGGTTTACTCGAATTGGTCGAAGCAAGCATTTCTAACTCAACAATTTTGAACATTCCATTTGCTTGGGTTTGTAATGCAAAGTTTCTATTCACAAGGCTGAAGATCCCTTATTGTTACCAAGTTCCTACCTTTCTTAATTTAAGGCGCATGAGGATTGTATTTCAACTTACAAATGATTGGCTTGGGAAGTGGAAGTGGTTGTTAGAAGTGCTCCAAAACTGTCCTAAGCTTCAGAATCTTATCATTCACGAGGATTCTACGTATGAAAATGAAGTTGGTGATGGTGATTGGATGGACCCACCAATTGTTTCAAAATGCCTTTTATCCGAGCTTAGAACATGTTCACTTGTAGGTTATAAAGGTATGAAGTCCGAGTTTCAGTTTGCAGAGTACATTTTGAAGAATGCAAAAATACTCCACACCATGACAATTACTGCCTCACCAGTTGATATCAATAAAAAGCACCAAATGCTTACGAAGTTATCTCTGTGTCTAAGGGGCTCTGCTACATGTAAACTCTCATTTGATTGA

Protein sequence

>MsG0780037597.01.T01

LRCPAHVPFQLWTESAPSQTPLSATFSHFSLPSNLLRQASSLKDGNHCGSHSSLSTSMIMTLQISTLFDFSSTQSCSPVTPRRQYNPSDFLMNLLNGCPALEYLRTYGLVQSRFKDEEFNGLLELVEASISNSTILNIPFAWVCNAKFLFTRLKIPYCYQVPTFLNLRRMRIVFQLTNDWLGKWKWLLEVLQNCPKLQNLIIHEDSTYENEVGDGDWMDPPIVSKCLLSELRTCSLVGYKGMKSEFQFAEYILKNAKILHTMTITASPVDINKKHQMLTKLSLCLRGSATCKLSFD*