Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006326.01.T01 | RHN71477.1 | 75 | 400 | 35 | 2 | 1 | 335 | 1 | 400 | 0 | 582 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006326.01.T01 | Q9LX51 | 37.419 | 155 | 72 | 5 | 11 | 158 | 7 | 143 | 2.49E-16 | 83.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006326.01.T01 | A0A396J8J8 | 75.000 | 400 | 35 | 2 | 1 | 335 | 1 | 400 | 0.0 | 582 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006326.01.T01 | MTR_2g005990 | 75.190 | 395 | 33 | 2 | 6 | 335 | 1 | 395 | 0.0 | 576 |
MsG0280006326.01.T01 | MTR_3g099830 | 47.970 | 394 | 113 | 6 | 7 | 335 | 8 | 374 | 5.12e-101 | 302 |
MsG0280006326.01.T01 | MTR_2g008310 | 46.194 | 381 | 138 | 9 | 10 | 334 | 1 | 370 | 2.65e-88 | 270 |
MsG0280006326.01.T01 | MTR_7g007340 | 45.556 | 360 | 136 | 9 | 10 | 329 | 12 | 351 | 3.16e-83 | 256 |
MsG0280006326.01.T01 | MTR_2g007090 | 46.269 | 335 | 139 | 7 | 1 | 335 | 1 | 294 | 5.64e-74 | 230 |
MsG0280006326.01.T01 | MTR_2g007400 | 66.092 | 174 | 59 | 0 | 161 | 334 | 229 | 402 | 5.04e-73 | 231 |
MsG0280006326.01.T01 | MTR_2g007400 | 45.614 | 228 | 95 | 4 | 9 | 235 | 10 | 209 | 6.56e-51 | 174 |
MsG0280006326.01.T01 | MTR_2g007360 | 63.536 | 181 | 60 | 3 | 161 | 335 | 194 | 374 | 2.39e-70 | 224 |
MsG0280006326.01.T01 | MTR_2g007360 | 57.609 | 92 | 39 | 0 | 7 | 98 | 8 | 99 | 5.25e-28 | 112 |
MsG0280006326.01.T01 | MTR_6g029350 | 66.092 | 174 | 50 | 3 | 163 | 334 | 31 | 197 | 6.96e-70 | 218 |
MsG0280006326.01.T01 | MTR_1g107385 | 38.442 | 398 | 166 | 10 | 11 | 335 | 32 | 423 | 2.47e-65 | 212 |
MsG0280006326.01.T01 | MTR_2g008320 | 58.854 | 192 | 69 | 3 | 144 | 334 | 244 | 426 | 1.36e-63 | 208 |
MsG0280006326.01.T01 | MTR_2g008320 | 44.586 | 157 | 76 | 3 | 2 | 158 | 43 | 188 | 2.90e-32 | 125 |
MsG0280006326.01.T01 | MTR_2g007550 | 38.889 | 360 | 149 | 12 | 7 | 332 | 10 | 332 | 4.41e-60 | 196 |
MsG0280006326.01.T01 | MTR_3g026920 | 36.049 | 405 | 170 | 11 | 5 | 334 | 14 | 404 | 6.60e-55 | 184 |
MsG0280006326.01.T01 | MTR_7g075820 | 56.647 | 173 | 67 | 2 | 163 | 335 | 230 | 394 | 1.41e-54 | 183 |
MsG0280006326.01.T01 | MTR_7g075820 | 43.023 | 172 | 90 | 2 | 6 | 171 | 1 | 170 | 1.33e-32 | 125 |
MsG0280006326.01.T01 | MTR_2g007530 | 38.655 | 357 | 156 | 14 | 7 | 334 | 14 | 336 | 7.78e-52 | 175 |
MsG0280006326.01.T01 | MTR_3g107160 | 35.550 | 391 | 167 | 13 | 11 | 334 | 10 | 382 | 4.45e-51 | 174 |
MsG0280006326.01.T01 | MTR_5g083890 | 59.509 | 163 | 63 | 3 | 163 | 324 | 231 | 391 | 5.17e-51 | 177 |
MsG0280006326.01.T01 | MTR_5g083890 | 43.452 | 168 | 85 | 3 | 11 | 171 | 6 | 170 | 2.80e-27 | 112 |
MsG0280006326.01.T01 | MTR_7g083740 | 32.898 | 383 | 177 | 11 | 3 | 332 | 9 | 364 | 3.30e-50 | 171 |
MsG0280006326.01.T01 | MTR_7g007370 | 38.348 | 339 | 173 | 8 | 5 | 327 | 11 | 329 | 1.13e-48 | 166 |
MsG0280006326.01.T01 | MTR_3g107120 | 33.249 | 394 | 177 | 12 | 11 | 332 | 9 | 388 | 2.72e-44 | 156 |
MsG0280006326.01.T01 | MTR_7g034090 | 36.994 | 346 | 160 | 12 | 8 | 332 | 1 | 309 | 1.52e-43 | 155 |
MsG0280006326.01.T01 | MTR_3g107100 | 48.936 | 188 | 69 | 6 | 165 | 334 | 219 | 397 | 7.86e-41 | 147 |
MsG0280006326.01.T01 | MTR_3g107100 | 40.136 | 147 | 77 | 3 | 11 | 157 | 11 | 146 | 4.36e-23 | 99.4 |
MsG0280006326.01.T01 | MTR_1g041245 | 34.447 | 389 | 178 | 15 | 9 | 333 | 9 | 384 | 5.00e-39 | 142 |
MsG0280006326.01.T01 | MTR_2g007450 | 44.149 | 188 | 83 | 5 | 163 | 335 | 240 | 420 | 5.10e-38 | 140 |
MsG0280006326.01.T01 | MTR_2g007450 | 41.579 | 190 | 102 | 4 | 10 | 195 | 15 | 199 | 1.24e-33 | 128 |
MsG0280006326.01.T01 | MTR_7g032380 | 31.250 | 384 | 178 | 15 | 3 | 333 | 4 | 354 | 8.01e-37 | 135 |
MsG0280006326.01.T01 | MTR_1g053025 | 47.222 | 180 | 78 | 7 | 165 | 335 | 218 | 389 | 2.66e-36 | 135 |
MsG0280006326.01.T01 | MTR_1g053025 | 44.000 | 150 | 77 | 2 | 10 | 158 | 1 | 144 | 3.89e-27 | 110 |
MsG0280006326.01.T01 | MTR_8g085430 | 34.769 | 325 | 165 | 15 | 1 | 307 | 1 | 296 | 9.13e-36 | 132 |
MsG0280006326.01.T01 | MTR_7g033915 | 31.026 | 390 | 185 | 16 | 1 | 333 | 1 | 363 | 1.18e-33 | 127 |
MsG0280006326.01.T01 | MTR_7g007080 | 49.153 | 177 | 76 | 7 | 163 | 335 | 213 | 379 | 1.52e-33 | 127 |
MsG0280006326.01.T01 | MTR_7g007080 | 37.662 | 154 | 83 | 3 | 8 | 158 | 1 | 144 | 9.81e-18 | 83.6 |
MsG0280006326.01.T01 | MTR_7g056420 | 30.851 | 376 | 178 | 11 | 11 | 329 | 9 | 359 | 8.90e-30 | 120 |
MsG0280006326.01.T01 | MTR_7g026500 | 30.147 | 408 | 174 | 15 | 9 | 332 | 12 | 392 | 1.53e-29 | 117 |
MsG0280006326.01.T01 | MTR_7g056430 | 30.851 | 376 | 178 | 11 | 11 | 329 | 9 | 359 | 4.74e-29 | 118 |
MsG0280006326.01.T01 | MTR_2g007610 | 42.857 | 154 | 80 | 4 | 182 | 334 | 4 | 150 | 2.07e-27 | 105 |
MsG0280006326.01.T01 | MTR_3g467400 | 31.414 | 382 | 184 | 18 | 10 | 332 | 2 | 364 | 4.74e-27 | 109 |
MsG0280006326.01.T01 | MTR_5g008950 | 30.105 | 382 | 185 | 16 | 13 | 332 | 1 | 362 | 2.28e-26 | 108 |
MsG0280006326.01.T01 | MTR_5g073420 | 28.358 | 402 | 179 | 16 | 8 | 332 | 8 | 377 | 5.92e-26 | 107 |
MsG0280006326.01.T01 | MTR_3g036250 | 31.234 | 381 | 183 | 18 | 10 | 332 | 4 | 363 | 9.91e-26 | 105 |
MsG0280006326.01.T01 | MTR_2g007460 | 44.167 | 120 | 46 | 3 | 7 | 125 | 8 | 107 | 1.06e-25 | 99.8 |
MsG0280006326.01.T01 | MTR_3g106960 | 42.690 | 171 | 82 | 7 | 163 | 327 | 30 | 190 | 1.58e-25 | 102 |
MsG0280006326.01.T01 | MTR_7g098510 | 29.639 | 388 | 198 | 14 | 7 | 332 | 14 | 388 | 1.93e-25 | 105 |
MsG0280006326.01.T01 | MTR_1g108820 | 30.693 | 404 | 182 | 19 | 7 | 334 | 4 | 385 | 1.96e-25 | 105 |
MsG0280006326.01.T01 | MTR_1g108800 | 31.880 | 367 | 182 | 14 | 7 | 334 | 4 | 341 | 2.00e-25 | 104 |
MsG0280006326.01.T01 | MTR_6g044572 | 28.501 | 407 | 187 | 12 | 10 | 333 | 1 | 386 | 2.23e-25 | 105 |
MsG0280006326.01.T01 | MTR_4g098590 | 36.788 | 193 | 104 | 6 | 13 | 202 | 1 | 178 | 2.75e-25 | 105 |
MsG0280006326.01.T01 | MTR_4g098590 | 42.949 | 156 | 80 | 4 | 165 | 318 | 217 | 365 | 4.29e-22 | 95.9 |
MsG0280006326.01.T01 | MTR_7g088260 | 30.326 | 399 | 171 | 16 | 11 | 332 | 91 | 459 | 3.47e-25 | 105 |
MsG0280006326.01.T01 | MTR_6g044560 | 28.676 | 408 | 187 | 12 | 9 | 333 | 176 | 562 | 3.59e-25 | 106 |
MsG0280006326.01.T01 | MTR_6g040270 | 28.678 | 401 | 177 | 13 | 13 | 334 | 10 | 380 | 3.82e-25 | 104 |
MsG0280006326.01.T01 | MTR_7g114710 | 29.581 | 382 | 180 | 16 | 9 | 332 | 11 | 361 | 4.87e-25 | 104 |
MsG0280006326.01.T01 | MTR_0543s0010 | 29.639 | 388 | 181 | 15 | 11 | 332 | 86 | 447 | 6.50e-25 | 104 |
MsG0280006326.01.T01 | MTR_1089s0010 | 28.431 | 408 | 177 | 16 | 7 | 333 | 4 | 377 | 2.12e-24 | 102 |
MsG0280006326.01.T01 | MTR_7g098570 | 30.075 | 399 | 180 | 17 | 7 | 331 | 16 | 389 | 6.72e-24 | 102 |
MsG0280006326.01.T01 | MTR_2g007500 | 33.193 | 238 | 104 | 7 | 9 | 242 | 12 | 198 | 1.17e-23 | 99.8 |
MsG0280006326.01.T01 | MTR_2g007500 | 41.270 | 126 | 57 | 3 | 165 | 279 | 211 | 330 | 5.07e-15 | 75.1 |
MsG0280006326.01.T01 | MTR_3g108150 | 28.608 | 388 | 195 | 16 | 11 | 332 | 13 | 384 | 1.19e-23 | 100 |
MsG0280006326.01.T01 | MTR_3g105060 | 28.351 | 388 | 185 | 15 | 9 | 332 | 12 | 370 | 3.05e-23 | 99.4 |
MsG0280006326.01.T01 | MTR_3g023630 | 29.610 | 385 | 189 | 17 | 10 | 332 | 7 | 371 | 3.81e-22 | 96.3 |
MsG0280006326.01.T01 | MTR_7g098480 | 28.960 | 404 | 184 | 16 | 7 | 335 | 14 | 389 | 4.71e-22 | 97.1 |
MsG0280006326.01.T01 | MTR_7g033470 | 62.338 | 77 | 26 | 2 | 8 | 82 | 11 | 86 | 5.21e-22 | 90.9 |
MsG0280006326.01.T01 | MTR_0492s0020 | 29.330 | 358 | 166 | 13 | 11 | 307 | 86 | 417 | 6.30e-22 | 96.3 |
MsG0280006326.01.T01 | MTR_7g075800 | 39.216 | 153 | 81 | 5 | 162 | 303 | 240 | 391 | 7.58e-22 | 97.1 |
MsG0280006326.01.T01 | MTR_7g056277 | 26.667 | 390 | 195 | 15 | 11 | 332 | 259 | 625 | 1.07e-21 | 96.3 |
MsG0280006326.01.T01 | MTR_1g066830 | 26.515 | 396 | 204 | 13 | 9 | 333 | 6 | 385 | 1.32e-21 | 94.7 |
MsG0280006326.01.T01 | MTR_7g034110 | 28.909 | 339 | 180 | 11 | 1 | 307 | 1 | 310 | 1.71e-21 | 94.0 |
MsG0280006326.01.T01 | MTR_5g012840 | 29.773 | 309 | 145 | 14 | 36 | 307 | 14 | 287 | 1.06e-20 | 91.3 |
MsG0280006326.01.T01 | MTR_5g039450 | 25.587 | 383 | 201 | 13 | 6 | 332 | 1 | 355 | 1.44e-20 | 91.7 |
MsG0280006326.01.T01 | MTR_7g056287 | 26.804 | 388 | 197 | 15 | 11 | 332 | 3 | 369 | 1.61e-20 | 91.7 |
MsG0280006326.01.T01 | MTR_6g022500 | 26.942 | 412 | 195 | 12 | 1 | 334 | 92 | 475 | 2.46e-20 | 92.0 |
MsG0280006326.01.T01 | MTR_3g040700 | 29.885 | 348 | 171 | 16 | 10 | 303 | 42 | 370 | 2.54e-20 | 91.7 |
MsG0280006326.01.T01 | MTR_5g082930 | 51.163 | 86 | 40 | 1 | 13 | 96 | 17 | 102 | 4.28e-20 | 87.4 |
MsG0280006326.01.T01 | MTR_5g008920 | 26.923 | 390 | 198 | 13 | 9 | 332 | 10 | 378 | 1.56e-19 | 89.0 |
MsG0280006326.01.T01 | MTR_5g045510 | 28.061 | 392 | 196 | 17 | 4 | 334 | 5 | 371 | 1.84e-19 | 88.6 |
MsG0280006326.01.T01 | MTR_7g056280 | 33.714 | 175 | 107 | 5 | 163 | 332 | 400 | 570 | 6.40e-19 | 88.2 |
MsG0280006326.01.T01 | MTR_7g056280 | 37.671 | 146 | 83 | 3 | 13 | 158 | 8 | 145 | 1.21e-18 | 87.0 |
MsG0280006326.01.T01 | MTR_7g055943 | 28.358 | 402 | 191 | 15 | 9 | 333 | 38 | 419 | 1.44e-18 | 86.3 |
MsG0280006326.01.T01 | MTR_7g034120 | 35.028 | 177 | 94 | 5 | 163 | 333 | 145 | 306 | 1.51e-18 | 85.1 |
MsG0280006326.01.T01 | MTR_3g108560 | 27.835 | 388 | 193 | 19 | 11 | 332 | 20 | 386 | 4.78e-18 | 84.7 |
MsG0280006326.01.T01 | MTR_3g094980 | 47.423 | 97 | 44 | 3 | 213 | 309 | 30 | 119 | 5.34e-18 | 80.9 |
MsG0280006326.01.T01 | MTR_7g056447 | 39.521 | 167 | 84 | 6 | 11 | 177 | 9 | 158 | 1.12e-17 | 82.4 |
MsG0280006326.01.T01 | MTR_5g058100 | 30.894 | 246 | 124 | 7 | 7 | 248 | 5 | 208 | 2.95e-17 | 82.4 |
MsG0280006326.01.T01 | MTR_7g056433 | 34.361 | 227 | 105 | 9 | 11 | 235 | 12 | 196 | 1.15e-16 | 80.5 |
MsG0280006326.01.T01 | MTR_7g056433 | 35.417 | 144 | 71 | 5 | 200 | 332 | 254 | 386 | 7.05e-16 | 78.2 |
MsG0280006326.01.T01 | MTR_1g085120 | 33.166 | 199 | 102 | 7 | 11 | 205 | 92 | 263 | 1.26e-16 | 80.9 |
MsG0280006326.01.T01 | MTR_1g085120 | 29.018 | 224 | 112 | 8 | 126 | 333 | 277 | 469 | 6.89e-12 | 66.6 |
MsG0280006326.01.T01 | MTR_7g033945 | 35.638 | 188 | 104 | 6 | 1 | 187 | 1 | 172 | 1.28e-16 | 77.0 |
MsG0280006326.01.T01 | MTR_6g011460 | 32.039 | 206 | 97 | 7 | 10 | 205 | 45 | 217 | 1.51e-16 | 80.5 |
MsG0280006326.01.T01 | MTR_1g085120 | 33.166 | 199 | 102 | 7 | 11 | 205 | 167 | 338 | 1.71e-16 | 80.5 |
MsG0280006326.01.T01 | MTR_1g085120 | 29.018 | 224 | 112 | 8 | 126 | 333 | 352 | 544 | 6.38e-12 | 66.6 |
MsG0280006326.01.T01 | MTR_7g115270 | 38.608 | 158 | 87 | 4 | 2 | 158 | 3 | 151 | 1.82e-16 | 80.1 |
MsG0280006326.01.T01 | MTR_7g115270 | 31.667 | 120 | 66 | 3 | 218 | 332 | 291 | 399 | 2.95e-12 | 67.4 |
MsG0280006326.01.T01 | MTR_1g085120 | 33.166 | 199 | 102 | 7 | 11 | 205 | 179 | 350 | 1.85e-16 | 80.5 |
MsG0280006326.01.T01 | MTR_5g061680 | 31.655 | 278 | 127 | 11 | 8 | 237 | 8 | 270 | 5.65e-16 | 77.8 |
MsG0280006326.01.T01 | MTR_7g056020 | 29.255 | 376 | 186 | 16 | 11 | 329 | 16 | 368 | 6.12e-16 | 79.0 |
MsG0280006326.01.T01 | MTR_7g034115 | 32.927 | 246 | 120 | 11 | 4 | 248 | 5 | 206 | 2.04e-15 | 76.6 |
MsG0280006326.01.T01 | MTR_5g045170 | 33.684 | 190 | 94 | 8 | 163 | 334 | 215 | 390 | 6.29e-15 | 75.5 |
MsG0280006326.01.T01 | MTR_5g045170 | 36.129 | 155 | 86 | 5 | 4 | 158 | 7 | 148 | 2.61e-12 | 67.8 |
MsG0280006326.01.T01 | MTR_1g108820 | 35.669 | 157 | 74 | 4 | 7 | 158 | 4 | 138 | 6.54e-15 | 75.1 |
MsG0280006326.01.T01 | MTR_2g036470 | 35.000 | 180 | 74 | 7 | 179 | 334 | 235 | 395 | 7.51e-15 | 75.1 |
MsG0280006326.01.T01 | MTR_5g013500 | 27.366 | 391 | 176 | 20 | 11 | 331 | 9 | 361 | 8.40e-15 | 74.7 |
MsG0280006326.01.T01 | MTR_3g095600 | 27.374 | 358 | 153 | 14 | 8 | 325 | 1 | 291 | 9.41e-15 | 73.9 |
MsG0280006326.01.T01 | MTR_6g022390 | 39.098 | 133 | 62 | 6 | 8 | 129 | 2 | 126 | 1.06e-14 | 70.9 |
MsG0280006326.01.T01 | MTR_7g032370 | 36.806 | 144 | 68 | 5 | 203 | 333 | 217 | 350 | 1.67e-14 | 73.9 |
MsG0280006326.01.T01 | MTR_7g032370 | 35.099 | 151 | 74 | 6 | 22 | 172 | 1 | 127 | 1.67e-12 | 67.8 |
MsG0280006326.01.T01 | MTR_5g007410 | 36.810 | 163 | 82 | 7 | 13 | 171 | 28 | 173 | 8.07e-14 | 72.4 |
MsG0280006326.01.T01 | MTR_5g007410 | 31.792 | 173 | 87 | 7 | 179 | 332 | 245 | 405 | 5.17e-12 | 67.0 |
MsG0280006326.01.T01 | MTR_4g039440 | 30.131 | 229 | 108 | 9 | 10 | 235 | 33 | 212 | 9.16e-14 | 72.0 |
MsG0280006326.01.T01 | MTR_8g445780 | 33.557 | 149 | 89 | 3 | 11 | 159 | 13 | 151 | 1.24e-13 | 71.6 |
MsG0280006326.01.T01 | MTR_1g090900 | 30.726 | 179 | 104 | 5 | 11 | 189 | 11 | 169 | 1.45e-13 | 68.9 |
MsG0280006326.01.T01 | MTR_1g053050 | 41.176 | 85 | 47 | 1 | 251 | 335 | 34 | 115 | 1.69e-13 | 66.6 |
MsG0280006326.01.T01 | MTR_7g033990 | 43.860 | 114 | 55 | 4 | 10 | 123 | 10 | 114 | 1.90e-13 | 71.2 |
MsG0280006326.01.T01 | MTR_7g033990 | 31.250 | 160 | 86 | 7 | 178 | 327 | 230 | 375 | 1.98e-13 | 71.2 |
MsG0280006326.01.T01 | MTR_1377s0010 | 34.965 | 143 | 71 | 5 | 179 | 314 | 7 | 134 | 2.06e-13 | 67.0 |
MsG0280006326.01.T01 | MTR_2g082850 | 36.000 | 125 | 74 | 3 | 7 | 129 | 18 | 138 | 2.16e-13 | 70.9 |
MsG0280006326.01.T01 | MTR_2g007350 | 48.485 | 66 | 33 | 1 | 243 | 307 | 40 | 105 | 2.26e-13 | 66.2 |
MsG0280006326.01.T01 | MTR_2g007100 | 46.667 | 75 | 35 | 2 | 10 | 83 | 1 | 71 | 3.16e-13 | 64.7 |
MsG0280006326.01.T01 | MTR_5g058000 | 35.443 | 158 | 86 | 3 | 7 | 164 | 4 | 145 | 1.53e-12 | 68.2 |
MsG0280006326.01.T01 | MTR_5g058000 | 35.870 | 184 | 84 | 9 | 163 | 333 | 211 | 373 | 1.63e-11 | 65.1 |
MsG0280006326.01.T01 | MTR_2g082800 | 36.800 | 125 | 62 | 4 | 11 | 130 | 27 | 139 | 2.13e-12 | 67.8 |
MsG0280006326.01.T01 | MTR_1g492880 | 44.444 | 90 | 47 | 2 | 6 | 95 | 1 | 87 | 7.47e-12 | 61.6 |
MsG0280006326.01.T01 | MTR_1g492880 | 44.444 | 90 | 47 | 2 | 6 | 95 | 1 | 87 | 7.55e-12 | 61.2 |
MsG0280006326.01.T01 | MTR_2g099980 | 27.049 | 244 | 135 | 8 | 11 | 235 | 38 | 257 | 8.95e-12 | 66.2 |
MsG0280006326.01.T01 | MTR_7g094030 | 35.246 | 122 | 67 | 4 | 7 | 127 | 24 | 134 | 9.24e-12 | 66.2 |
MsG0280006326.01.T01 | MTR_6g045333 | 33.889 | 180 | 78 | 8 | 179 | 333 | 281 | 444 | 1.21e-11 | 65.9 |
MsG0280006326.01.T01 | MTR_1g090883 | 34.591 | 159 | 88 | 6 | 11 | 169 | 19 | 161 | 1.23e-11 | 65.5 |
MsG0280006326.01.T01 | MTR_2g072530 | 35.000 | 120 | 67 | 2 | 11 | 127 | 13 | 124 | 1.75e-11 | 65.1 |
MsG0280006326.01.T01 | MTR_4g056020 | 32.821 | 195 | 105 | 8 | 11 | 200 | 9 | 182 | 1.87e-11 | 65.1 |
MsG0280006326.01.T01 | MTR_3g108560 | 34.228 | 149 | 75 | 5 | 11 | 158 | 20 | 146 | 2.62e-11 | 63.9 |
MsG0280006326.01.T01 | MTR_4g093690 | 31.757 | 148 | 82 | 4 | 11 | 158 | 18 | 146 | 2.75e-11 | 63.5 |
MsG0280006326.01.T01 | MTR_6g022520 | 31.892 | 185 | 97 | 7 | 163 | 333 | 142 | 311 | 2.77e-11 | 63.9 |
MsG0280006326.01.T01 | MTR_7g098590 | 46.053 | 76 | 35 | 1 | 7 | 82 | 14 | 83 | 3.36e-11 | 60.8 |
MsG0280006326.01.T01 | MTR_1g095750 | 50.000 | 72 | 33 | 1 | 10 | 81 | 45 | 113 | 3.72e-11 | 60.8 |
MsG0280006326.01.T01 | MTR_1g077420 | 28.365 | 208 | 128 | 7 | 8 | 214 | 1 | 188 | 4.17e-11 | 63.2 |
MsG0280006326.01.T01 | MTR_3g082890 | 35.570 | 149 | 77 | 5 | 11 | 158 | 17 | 147 | 4.64e-11 | 63.9 |
MsG0280006326.01.T01 | MTR_3g082890 | 34.839 | 155 | 70 | 6 | 11 | 158 | 97 | 227 | 5.43e-11 | 63.9 |
MsG0280006326.01.T01 | MTR_1g115250 | 31.481 | 162 | 87 | 6 | 3 | 158 | 24 | 167 | 5.52e-11 | 63.5 |
MsG0280006326.01.T01 | MTR_1g013560 | 26.316 | 247 | 148 | 9 | 10 | 246 | 18 | 240 | 5.98e-11 | 63.2 |
MsG0280006326.01.T01 | MTR_4g056030 | 32.515 | 163 | 85 | 6 | 11 | 169 | 9 | 150 | 6.35e-11 | 63.5 |
MsG0280006326.01.T01 | MTR_7g033940 | 37.903 | 124 | 56 | 4 | 10 | 127 | 93 | 201 | 6.84e-11 | 61.6 |
MsG0280006326.01.T01 | MTR_3g095640 | 32.692 | 156 | 92 | 4 | 7 | 158 | 14 | 160 | 9.18e-11 | 60.5 |
MsG0280006326.01.T01 | MTR_6g088705 | 42.697 | 89 | 50 | 1 | 11 | 99 | 19 | 106 | 9.41e-11 | 61.6 |
MsG0280006326.01.T01 | MTR_4g134150 | 33.784 | 148 | 76 | 5 | 11 | 158 | 14 | 139 | 9.54e-11 | 61.6 |
MsG0280006326.01.T01 | MTR_1g013560 | 26.316 | 247 | 148 | 9 | 10 | 246 | 18 | 240 | 9.63e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006326.01.T01 | AT3G59200 | 37.419 | 155 | 72 | 5 | 11 | 158 | 7 | 143 | 1.69e-17 | 82.8 |
MsG0280006326.01.T01 | AT4G14103 | 30.453 | 243 | 119 | 9 | 6 | 244 | 3 | 199 | 2.50e-17 | 82.4 |
MsG0280006326.01.T01 | AT4G14103 | 30.453 | 243 | 119 | 9 | 6 | 244 | 3 | 199 | 2.50e-17 | 82.4 |
MsG0280006326.01.T01 | AT3G59200 | 37.419 | 155 | 72 | 5 | 11 | 158 | 7 | 143 | 2.53e-17 | 83.2 |
MsG0280006326.01.T01 | AT5G56420 | 31.381 | 239 | 140 | 8 | 11 | 247 | 6 | 222 | 3.49e-17 | 82.4 |
MsG0280006326.01.T01 | AT5G56420 | 31.381 | 239 | 140 | 8 | 11 | 247 | 6 | 222 | 3.49e-17 | 82.4 |
MsG0280006326.01.T01 | AT5G56420 | 31.381 | 239 | 140 | 8 | 11 | 247 | 6 | 222 | 3.49e-17 | 82.4 |
MsG0280006326.01.T01 | AT4G14103 | 29.630 | 243 | 121 | 8 | 6 | 244 | 3 | 199 | 5.37e-17 | 82.0 |
MsG0280006326.01.T01 | AT5G56440 | 30.213 | 235 | 110 | 7 | 10 | 238 | 1 | 187 | 8.62e-17 | 81.3 |
MsG0280006326.01.T01 | AT5G56380 | 33.696 | 184 | 92 | 6 | 10 | 184 | 1 | 163 | 1.18e-15 | 77.8 |
MsG0280006326.01.T01 | AT5G56380 | 33.696 | 184 | 92 | 6 | 10 | 184 | 1 | 163 | 1.18e-15 | 77.8 |
MsG0280006326.01.T01 | AT5G38590 | 28.173 | 323 | 176 | 13 | 10 | 324 | 1 | 275 | 1.32e-15 | 76.3 |
MsG0280006326.01.T01 | AT3G59000 | 34.568 | 162 | 83 | 5 | 10 | 161 | 1 | 149 | 1.83e-15 | 77.4 |
MsG0280006326.01.T01 | AT3G59230 | 32.051 | 156 | 83 | 5 | 11 | 158 | 12 | 152 | 3.51e-15 | 76.6 |
MsG0280006326.01.T01 | AT4G09920 | 31.179 | 263 | 123 | 12 | 10 | 253 | 1 | 224 | 4.59e-15 | 75.1 |
MsG0280006326.01.T01 | AT4G09920 | 31.179 | 263 | 123 | 12 | 10 | 253 | 1 | 224 | 4.59e-15 | 75.1 |
MsG0280006326.01.T01 | AT4G09920 | 31.179 | 263 | 123 | 12 | 10 | 253 | 1 | 224 | 4.59e-15 | 75.1 |
MsG0280006326.01.T01 | AT4G14096 | 34.395 | 157 | 84 | 4 | 6 | 158 | 3 | 144 | 5.25e-15 | 76.3 |
MsG0280006326.01.T01 | AT4G14096 | 34.395 | 157 | 84 | 4 | 6 | 158 | 3 | 144 | 5.25e-15 | 76.3 |
MsG0280006326.01.T01 | AT2G42720 | 36.424 | 151 | 85 | 5 | 10 | 158 | 1 | 142 | 1.02e-14 | 75.1 |
MsG0280006326.01.T01 | AT4G09920 | 30.418 | 263 | 125 | 11 | 10 | 253 | 1 | 224 | 1.29e-14 | 73.9 |
MsG0280006326.01.T01 | AT4G09920 | 30.418 | 263 | 125 | 11 | 10 | 253 | 1 | 224 | 1.29e-14 | 73.9 |
MsG0280006326.01.T01 | AT4G26350 | 30.876 | 217 | 111 | 8 | 10 | 207 | 1 | 197 | 1.71e-14 | 74.3 |
MsG0280006326.01.T01 | AT1G78750 | 35.443 | 158 | 85 | 6 | 7 | 158 | 14 | 160 | 2.15e-14 | 74.3 |
MsG0280006326.01.T01 | AT1G78750 | 35.443 | 158 | 85 | 6 | 7 | 158 | 14 | 160 | 2.15e-14 | 74.3 |
MsG0280006326.01.T01 | AT3G58900 | 33.544 | 158 | 80 | 5 | 10 | 158 | 1 | 142 | 2.30e-14 | 73.2 |
MsG0280006326.01.T01 | AT1G58310 | 34.483 | 174 | 94 | 7 | 11 | 171 | 8 | 174 | 2.38e-14 | 74.3 |
MsG0280006326.01.T01 | AT4G13960 | 30.769 | 221 | 114 | 9 | 10 | 217 | 1 | 195 | 2.60e-14 | 73.9 |
MsG0280006326.01.T01 | AT4G13960 | 30.769 | 221 | 114 | 9 | 10 | 217 | 1 | 195 | 2.60e-14 | 73.9 |
MsG0280006326.01.T01 | AT3G58900 | 33.544 | 158 | 80 | 5 | 10 | 158 | 1 | 142 | 3.15e-14 | 73.6 |
MsG0280006326.01.T01 | AT4G15060 | 30.702 | 228 | 119 | 8 | 10 | 237 | 25 | 213 | 3.82e-14 | 73.2 |
MsG0280006326.01.T01 | AT4G15060 | 30.702 | 228 | 119 | 8 | 10 | 237 | 171 | 359 | 3.84e-14 | 73.6 |
MsG0280006326.01.T01 | AT3G58900 | 33.544 | 158 | 80 | 5 | 10 | 158 | 1 | 142 | 3.87e-14 | 72.8 |
MsG0280006326.01.T01 | AT3G58900 | 33.544 | 158 | 80 | 5 | 10 | 158 | 1 | 142 | 3.87e-14 | 72.8 |
MsG0280006326.01.T01 | AT3G49150 | 33.553 | 152 | 83 | 5 | 11 | 158 | 16 | 153 | 4.29e-14 | 73.2 |
MsG0280006326.01.T01 | AT3G44080 | 36.025 | 161 | 75 | 5 | 16 | 163 | 12 | 157 | 5.46e-14 | 72.8 |
MsG0280006326.01.T01 | AT1G32375 | 26.840 | 231 | 123 | 7 | 10 | 237 | 1 | 188 | 5.71e-14 | 72.8 |
MsG0280006326.01.T01 | AT1G32375 | 26.840 | 231 | 123 | 7 | 10 | 237 | 1 | 188 | 5.71e-14 | 72.8 |
MsG0280006326.01.T01 | AT3G58860 | 33.333 | 159 | 83 | 6 | 7 | 157 | 3 | 146 | 6.05e-14 | 72.8 |
MsG0280006326.01.T01 | AT3G03040 | 33.121 | 157 | 82 | 5 | 10 | 158 | 1 | 142 | 7.50e-14 | 72.4 |
MsG0280006326.01.T01 | AT4G10400 | 35.849 | 159 | 69 | 7 | 10 | 158 | 1 | 136 | 9.09e-14 | 72.0 |
MsG0280006326.01.T01 | AT4G10400 | 35.849 | 159 | 69 | 7 | 10 | 158 | 1 | 136 | 9.09e-14 | 72.0 |
MsG0280006326.01.T01 | AT4G10400 | 35.849 | 159 | 69 | 7 | 10 | 158 | 1 | 136 | 9.09e-14 | 72.0 |
MsG0280006326.01.T01 | AT5G41830 | 30.612 | 196 | 103 | 8 | 11 | 191 | 13 | 190 | 1.41e-13 | 72.0 |
MsG0280006326.01.T01 | AT3G59000 | 48.684 | 76 | 31 | 1 | 10 | 77 | 1 | 76 | 1.41e-13 | 71.2 |
MsG0280006326.01.T01 | AT5G38392 | 32.298 | 161 | 80 | 5 | 10 | 158 | 1 | 144 | 1.71e-13 | 69.3 |
MsG0280006326.01.T01 | AT5G56370 | 29.572 | 257 | 136 | 10 | 10 | 245 | 1 | 233 | 2.24e-13 | 70.9 |
MsG0280006326.01.T01 | AT5G56370 | 29.572 | 257 | 136 | 10 | 10 | 245 | 1 | 233 | 2.24e-13 | 70.9 |
MsG0280006326.01.T01 | AT5G56370 | 36.667 | 150 | 78 | 6 | 10 | 158 | 1 | 134 | 2.33e-13 | 70.5 |
MsG0280006326.01.T01 | AT4G26340 | 27.350 | 234 | 140 | 8 | 10 | 238 | 1 | 209 | 2.37e-13 | 70.9 |
MsG0280006326.01.T01 | AT3G42770 | 37.838 | 148 | 79 | 4 | 16 | 158 | 4 | 143 | 2.54e-13 | 71.2 |
MsG0280006326.01.T01 | AT5G53840 | 32.099 | 162 | 81 | 5 | 11 | 167 | 18 | 155 | 2.94e-13 | 70.9 |
MsG0280006326.01.T01 | AT1G69630 | 33.333 | 156 | 86 | 4 | 7 | 159 | 14 | 154 | 3.01e-13 | 70.9 |
MsG0280006326.01.T01 | AT5G41840 | 27.273 | 275 | 154 | 9 | 6 | 256 | 9 | 261 | 3.56e-13 | 70.9 |
MsG0280006326.01.T01 | AT3G52680 | 30.000 | 230 | 119 | 7 | 8 | 237 | 18 | 205 | 3.73e-13 | 70.1 |
MsG0280006326.01.T01 | AT5G56690 | 27.511 | 229 | 140 | 8 | 13 | 235 | 4 | 212 | 3.94e-13 | 70.1 |
MsG0280006326.01.T01 | AT3G52680 | 30.000 | 230 | 119 | 7 | 8 | 237 | 18 | 205 | 4.23e-13 | 70.1 |
MsG0280006326.01.T01 | AT5G38390 | 34.228 | 149 | 81 | 4 | 10 | 158 | 1 | 132 | 4.55e-13 | 70.1 |
MsG0280006326.01.T01 | AT5G41630 | 33.333 | 159 | 79 | 4 | 11 | 156 | 12 | 156 | 5.16e-13 | 70.1 |
MsG0280006326.01.T01 | AT3G58940 | 33.951 | 162 | 81 | 5 | 10 | 158 | 1 | 149 | 9.57e-13 | 69.3 |
MsG0280006326.01.T01 | AT3G58940 | 33.951 | 162 | 81 | 5 | 10 | 158 | 1 | 149 | 9.57e-13 | 69.3 |
MsG0280006326.01.T01 | AT2G26860 | 28.205 | 234 | 126 | 9 | 10 | 241 | 1 | 194 | 1.33e-12 | 68.6 |
MsG0280006326.01.T01 | AT2G26860 | 28.205 | 234 | 126 | 9 | 10 | 241 | 1 | 194 | 1.33e-12 | 68.6 |
MsG0280006326.01.T01 | AT3G59210 | 32.967 | 182 | 76 | 8 | 11 | 167 | 7 | 167 | 1.41e-12 | 68.9 |
MsG0280006326.01.T01 | AT3G59210 | 32.967 | 182 | 76 | 8 | 11 | 167 | 7 | 167 | 1.41e-12 | 68.9 |
MsG0280006326.01.T01 | AT3G59210 | 32.967 | 182 | 76 | 8 | 11 | 167 | 7 | 167 | 1.41e-12 | 68.9 |
MsG0280006326.01.T01 | AT3G59210 | 32.967 | 182 | 76 | 8 | 11 | 167 | 7 | 167 | 1.41e-12 | 68.9 |
MsG0280006326.01.T01 | AT3G59210 | 32.967 | 182 | 76 | 8 | 11 | 167 | 7 | 167 | 1.41e-12 | 68.9 |
MsG0280006326.01.T01 | AT3G58930 | 31.056 | 161 | 86 | 4 | 10 | 158 | 1 | 148 | 1.45e-12 | 68.6 |
MsG0280006326.01.T01 | AT3G58930 | 31.056 | 161 | 86 | 4 | 10 | 158 | 1 | 148 | 1.45e-12 | 68.6 |
MsG0280006326.01.T01 | AT3G58930 | 31.056 | 161 | 86 | 4 | 10 | 158 | 1 | 148 | 1.45e-12 | 68.6 |
MsG0280006326.01.T01 | AT3G58880 | 34.756 | 164 | 69 | 6 | 10 | 158 | 2 | 142 | 1.69e-12 | 68.6 |
MsG0280006326.01.T01 | AT4G13985 | 31.788 | 151 | 95 | 3 | 10 | 158 | 18 | 162 | 2.24e-12 | 68.2 |
MsG0280006326.01.T01 | AT3G59170 | 34.483 | 174 | 85 | 6 | 7 | 158 | 3 | 169 | 3.16e-12 | 67.8 |
MsG0280006326.01.T01 | AT3G03030 | 33.758 | 157 | 81 | 6 | 10 | 158 | 1 | 142 | 3.16e-12 | 67.8 |
MsG0280006326.01.T01 | AT3G03030 | 33.758 | 157 | 81 | 6 | 10 | 158 | 1 | 142 | 4.36e-12 | 66.6 |
MsG0280006326.01.T01 | AT3G59190 | 31.707 | 164 | 81 | 6 | 7 | 158 | 8 | 152 | 5.07e-12 | 66.6 |
MsG0280006326.01.T01 | AT3G58920 | 34.416 | 154 | 82 | 6 | 10 | 158 | 1 | 140 | 6.15e-12 | 66.6 |
MsG0280006326.01.T01 | AT3G59190 | 32.121 | 165 | 79 | 7 | 7 | 158 | 8 | 152 | 7.59e-12 | 66.6 |
MsG0280006326.01.T01 | AT4G00320 | 30.380 | 158 | 91 | 5 | 11 | 158 | 13 | 161 | 1.11e-11 | 66.2 |
MsG0280006326.01.T01 | AT1G16930 | 26.809 | 235 | 120 | 12 | 11 | 241 | 15 | 201 | 1.55e-11 | 65.5 |
MsG0280006326.01.T01 | AT1G16930 | 26.809 | 235 | 120 | 12 | 11 | 241 | 15 | 201 | 1.55e-11 | 65.5 |
MsG0280006326.01.T01 | AT1G16930 | 26.809 | 235 | 120 | 12 | 11 | 241 | 15 | 201 | 1.55e-11 | 65.5 |
MsG0280006326.01.T01 | AT2G42730 | 32.903 | 155 | 90 | 5 | 9 | 158 | 3 | 148 | 1.66e-11 | 65.5 |
MsG0280006326.01.T01 | AT1G55660 | 32.667 | 150 | 90 | 6 | 10 | 158 | 52 | 191 | 1.82e-11 | 65.1 |
MsG0280006326.01.T01 | AT3G62440 | 31.447 | 159 | 89 | 4 | 10 | 158 | 1 | 149 | 1.97e-11 | 65.1 |
MsG0280006326.01.T01 | AT1G55660 | 32.667 | 150 | 90 | 6 | 10 | 158 | 52 | 191 | 2.27e-11 | 65.1 |
MsG0280006326.01.T01 | AT3G50710 | 32.026 | 153 | 92 | 4 | 10 | 161 | 1 | 142 | 2.30e-11 | 65.1 |
MsG0280006326.01.T01 | AT3G59240 | 32.258 | 155 | 82 | 6 | 11 | 158 | 8 | 146 | 3.16e-11 | 64.7 |
MsG0280006326.01.T01 | AT4G00160 | 27.407 | 270 | 150 | 10 | 8 | 270 | 13 | 243 | 3.25e-11 | 64.7 |
MsG0280006326.01.T01 | AT3G58820 | 44.737 | 76 | 34 | 1 | 10 | 77 | 1 | 76 | 4.17e-11 | 63.9 |
MsG0280006326.01.T01 | AT3G59160 | 27.907 | 258 | 131 | 12 | 7 | 244 | 9 | 231 | 4.39e-11 | 64.3 |
MsG0280006326.01.T01 | AT1G66300 | 30.667 | 150 | 89 | 3 | 10 | 159 | 28 | 162 | 4.57e-11 | 63.9 |
MsG0280006326.01.T01 | AT3G44810 | 29.843 | 191 | 121 | 5 | 7 | 194 | 3 | 183 | 5.59e-11 | 63.9 |
MsG0280006326.01.T01 | AT1G78760 | 29.139 | 151 | 90 | 5 | 11 | 159 | 16 | 151 | 7.80e-11 | 63.2 |
MsG0280006326.01.T01 | AT5G38590 | 26.966 | 267 | 128 | 10 | 10 | 271 | 1 | 205 | 9.05e-11 | 62.4 |
Find 67 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTCATGCTCCCGTTAAT+TGG | 0.129934 | 2:+448781 | MsG0280006326.01.T01:CDS |
GATGAAAGCACTTTCAAATT+TGG | 0.147247 | 2:+449128 | MsG0280006326.01.T01:CDS |
AAGAAGATAATCAAGAAAAT+TGG | 0.198858 | 2:+449545 | MsG0280006326.01.T01:CDS |
CAACGATTGGGTCGACATTT+TGG | 0.206332 | 2:+448728 | MsG0280006326.01.T01:CDS |
CGCGAGACTGCTTCGGTTCT+CGG | 0.209012 | 2:+448634 | MsG0280006326.01.T01:CDS |
TTCAAAATCTTGAACTTTAT+CGG | 0.243927 | 2:+449387 | MsG0280006326.01.T01:CDS |
ACCTTACAACTTGCATAATT+CGG | 0.253340 | 2:+449605 | MsG0280006326.01.T01:CDS |
ATTCGGGACTTCGCATTTGC+AGG | 0.313585 | 2:+449622 | MsG0280006326.01.T01:CDS |
CAAGAAAATTGGGTGGATTC+CGG | 0.319468 | 2:+449556 | MsG0280006326.01.T01:CDS |
TCACCAAATGGATCAGATTA+TGG | 0.327472 | 2:-449313 | None:intergenic |
AGAAGTTACAAGACTGCAAT+TGG | 0.337595 | 2:+449506 | MsG0280006326.01.T01:intron |
CCTTACAACTTGCATAATTC+GGG | 0.357997 | 2:+449606 | MsG0280006326.01.T01:CDS |
CAAAGAGATGGACTCATCTA+TGG | 0.362163 | 2:+448517 | MsG0280006326.01.T01:CDS |
TCAAAATCTTGAACTTTATC+GGG | 0.384518 | 2:+449388 | MsG0280006326.01.T01:CDS |
ATATAATGTGACAATGTTGT+AGG | 0.385029 | 2:-449645 | None:intergenic |
CCCGAATTATGCAAGTTGTA+AGG | 0.393431 | 2:-449606 | None:intergenic |
GGATGTGACAAAGGCTTGTT+TGG | 0.400387 | 2:-448487 | None:intergenic |
ATTCCATAATCTGATCCATT+TGG | 0.400998 | 2:+449310 | MsG0280006326.01.T01:CDS |
TATTGTTTCTTCCCAATTAA+CGG | 0.401221 | 2:-448793 | None:intergenic |
GCATGTCGATGGCGGTAGAT+AGG | 0.404410 | 2:+448412 | MsG0280006326.01.T01:CDS |
AGAAGATAATCAAGAAAATT+GGG | 0.409926 | 2:+449546 | MsG0280006326.01.T01:CDS |
TCTTCATGCTCCCGTTAATT+GGG | 0.416219 | 2:+448782 | MsG0280006326.01.T01:CDS |
TTTCATTCGCGAGACTGCTT+CGG | 0.431535 | 2:+448627 | MsG0280006326.01.T01:CDS |
ATTGTTTCTTCCCAATTAAC+GGG | 0.435264 | 2:-448792 | None:intergenic |
TGGATCAGATTATGGAATGT+AGG | 0.452385 | 2:-449305 | None:intergenic |
AGTCCATCTCTTTGAAAGAA+TGG | 0.456939 | 2:-448508 | None:intergenic |
TCCTCTGGACTTCTCCGTTG+TGG | 0.474124 | 2:+448693 | MsG0280006326.01.T01:CDS |
CATCCATTCTTTCAAAGAGA+TGG | 0.475847 | 2:+448505 | MsG0280006326.01.T01:CDS |
GGATCAGATTATGGAATGTA+GGG | 0.488540 | 2:-449304 | None:intergenic |
TGGAATGTAGGGAAGTCATT+AGG | 0.492016 | 2:-449293 | None:intergenic |
TTGTTGTTCTCAAGCTATGT+TGG | 0.492182 | 2:+448856 | MsG0280006326.01.T01:CDS |
AACTTACGATATCAACGATT+GGG | 0.510848 | 2:+448716 | MsG0280006326.01.T01:CDS |
TGACATGTTGTAGAGGCCCT+TGG | 0.513532 | 2:-449766 | None:intergenic |
GTCGAGGATGAAACTGTTGA+TGG | 0.518598 | 2:-448658 | None:intergenic |
ATGTGAATCAGAATCTCGTC+TGG | 0.521176 | 2:-448447 | None:intergenic |
CGTCGTAGTTGATCACCAAA+TGG | 0.521273 | 2:-449325 | None:intergenic |
AAGGCAAGATGGAACAAATC+CGG | 0.522229 | 2:-449575 | None:intergenic |
GAACTTACGATATCAACGAT+TGG | 0.526331 | 2:+448715 | MsG0280006326.01.T01:CDS |
AAATTTGAAAGTGCTTTCAT+CGG | 0.527382 | 2:-449126 | None:intergenic |
GACTATTATCCTCATGTCCA+AGG | 0.534655 | 2:+449749 | MsG0280006326.01.T01:CDS |
ATTTGGTGATCAACTACGAC+GGG | 0.536259 | 2:+449327 | MsG0280006326.01.T01:CDS |
TTTGAAGCTTAGGGCAATGG+TGG | 0.539446 | 2:-449370 | None:intergenic |
ATATAGCAGTAGGCAACGTA+GGG | 0.540524 | 2:-448818 | None:intergenic |
AATATAGCAGTAGGCAACGT+AGG | 0.548545 | 2:-448819 | None:intergenic |
TGAAAGAATGGATGTGACAA+AGG | 0.550204 | 2:-448496 | None:intergenic |
GTACTAGTAAATATAGCAGT+AGG | 0.552238 | 2:-448828 | None:intergenic |
AGGTTTAATGAAAGGCAAGA+TGG | 0.554777 | 2:-449586 | None:intergenic |
GTGTCGCTGAAGTCAAGATC+CGG | 0.558974 | 2:-448549 | None:intergenic |
GAAGTTACAAGACTGCAATT+GGG | 0.560707 | 2:+449507 | MsG0280006326.01.T01:intron |
GTTCGAACACAGCATGTCGA+TGG | 0.578474 | 2:+448401 | MsG0280006326.01.T01:CDS |
AAGTTGTAAGGTTTAATGAA+AGG | 0.587102 | 2:-449594 | None:intergenic |
GTTTCTACGTATACAACTAT+CGG | 0.588804 | 2:+449152 | MsG0280006326.01.T01:CDS |
TGTAGAGGCCCTTGGACATG+AGG | 0.592410 | 2:-449758 | None:intergenic |
TGAAAGTTGACATGTTGTAG+AGG | 0.609293 | 2:-449773 | None:intergenic |
ACTATTATCCTCATGTCCAA+GGG | 0.651448 | 2:+449750 | MsG0280006326.01.T01:CDS |
AGATAATCAAGAAAATTGGG+TGG | 0.651874 | 2:+449549 | MsG0280006326.01.T01:CDS |
CGAACACAGCATGTCGATGG+CGG | 0.667634 | 2:+448404 | MsG0280006326.01.T01:CDS |
TCTACGTATACAACTATCGG+AGG | 0.668619 | 2:+449155 | MsG0280006326.01.T01:CDS |
TCGATGGCGGTAGATAGGAT+CGG | 0.669927 | 2:+448417 | MsG0280006326.01.T01:CDS |
GTTACAAGACTGCAATTGGG+AGG | 0.681134 | 2:+449510 | MsG0280006326.01.T01:CDS |
CATTTGGTGATCAACTACGA+CGG | 0.690396 | 2:+449326 | MsG0280006326.01.T01:CDS |
TCCACAACGGAGAAGTCCAG+AGG | 0.690789 | 2:-448694 | None:intergenic |
ATAGCAGTAGGCAACGTAGG+GGG | 0.696907 | 2:-448816 | None:intergenic |
AGGAAAAGTTATCAACGTCG+AGG | 0.697748 | 2:-448674 | None:intergenic |
TATAGCAGTAGGCAACGTAG+GGG | 0.713672 | 2:-448817 | None:intergenic |
TGATATCGTAAGTTCCACAA+CGG | 0.743664 | 2:-448707 | None:intergenic |
TTTGGTGATCAACTACGACG+GGG | 0.793660 | 2:+449328 | MsG0280006326.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAACAATACATAATAA+AGG | - | Chr2:449464-449483 | None:intergenic | 10.0% |
!! | TGTTATTATTATTATCATTA+TGG | + | Chr2:449185-449204 | MsG0280006326.01.T01:intron | 10.0% |
!!! | AAAATAAATTTTCATTCCAT+TGG | - | Chr2:449217-449236 | None:intergenic | 15.0% |
!!! | ATGGAATGAAAATTTATTTT+TGG | + | Chr2:449217-449236 | MsG0280006326.01.T01:intron | 15.0% |
!! | AAGAAGATAATCAAGAAAAT+TGG | + | Chr2:449545-449564 | MsG0280006326.01.T01:CDS | 20.0% |
!! | AGAAGATAATCAAGAAAATT+GGG | + | Chr2:449546-449565 | MsG0280006326.01.T01:CDS | 20.0% |
!! | ATAAAAAATCAGATTGTTGA+TGG | - | Chr2:448959-448978 | None:intergenic | 20.0% |
!! | TTCAAAATCTTGAACTTTAT+CGG | + | Chr2:449387-449406 | MsG0280006326.01.T01:CDS | 20.0% |
! | AAGTTGTAAGGTTTAATGAA+AGG | - | Chr2:449597-449616 | None:intergenic | 25.0% |
! | AGTAGAATTCTTTCAAATGT+AGG | - | Chr2:448935-448954 | None:intergenic | 25.0% |
! | ATATAATGTGACAATGTTGT+AGG | - | Chr2:449648-449667 | None:intergenic | 25.0% |
! | GTAGAATTCTTTCAAATGTA+GGG | - | Chr2:448934-448953 | None:intergenic | 25.0% |
! | GTATCAGAAATAAAGCAAAA+TGG | - | Chr2:449243-449262 | None:intergenic | 25.0% |
! | TCAAAATCTTGAACTTTATC+GGG | + | Chr2:449388-449407 | MsG0280006326.01.T01:CDS | 25.0% |
!! | TATTGTTTCTTCCCAATTAA+CGG | - | Chr2:448796-448815 | None:intergenic | 25.0% |
!!! | AAATTTGAAAGTGCTTTCAT+CGG | - | Chr2:449129-449148 | None:intergenic | 25.0% |
!!! | TGATTTTTTATGCTTCTAGA+TGG | + | Chr2:448968-448987 | MsG0280006326.01.T01:intron | 25.0% |
AACTTACGATATCAACGATT+GGG | + | Chr2:448716-448735 | MsG0280006326.01.T01:CDS | 30.0% | |
ACCTTACAACTTGCATAATT+CGG | + | Chr2:449605-449624 | MsG0280006326.01.T01:CDS | 30.0% | |
AGATAATCAAGAAAATTGGG+TGG | + | Chr2:449549-449568 | MsG0280006326.01.T01:CDS | 30.0% | |
ATTCCATAATCTGATCCATT+TGG | + | Chr2:449310-449329 | MsG0280006326.01.T01:CDS | 30.0% | |
CTTCAACTGTCTAATATAAC+CGG | + | Chr2:449010-449029 | MsG0280006326.01.T01:intron | 30.0% | |
GTAAAGAAGCAAAATCGAAA+TGG | - | Chr2:449038-449057 | None:intergenic | 30.0% | |
GTACTAGTAAATATAGCAGT+AGG | - | Chr2:448831-448850 | None:intergenic | 30.0% | |
GTTTCTACGTATACAACTAT+CGG | + | Chr2:449152-449171 | MsG0280006326.01.T01:CDS | 30.0% | |
TTCAACTGTCTAATATAACC+GGG | + | Chr2:449011-449030 | MsG0280006326.01.T01:intron | 30.0% | |
! | ATTGTTTCTTCCCAATTAAC+GGG | - | Chr2:448795-448814 | None:intergenic | 30.0% |
! | TAAATTTTCATTCCATTGGC+AGG | - | Chr2:449213-449232 | None:intergenic | 30.0% |
!! | AAGCTATGTTGGTTCTTTAT+GGG | + | Chr2:448867-448886 | MsG0280006326.01.T01:intron | 30.0% |
!! | GATGAAAGCACTTTCAAATT+TGG | + | Chr2:449128-449147 | MsG0280006326.01.T01:CDS | 30.0% |
!!! | AGTTCAAGATTTTGAAGCTT+AGG | - | Chr2:449383-449402 | None:intergenic | 30.0% |
!!! | GTTCAAGATTTTGAAGCTTA+GGG | - | Chr2:449382-449401 | None:intergenic | 30.0% |
ACTATTATCCTCATGTCCAA+GGG | + | Chr2:449750-449769 | MsG0280006326.01.T01:CDS | 35.0% | |
AGAAGTTACAAGACTGCAAT+TGG | + | Chr2:449506-449525 | MsG0280006326.01.T01:intron | 35.0% | |
AGGTTTAATGAAAGGCAAGA+TGG | - | Chr2:449589-449608 | None:intergenic | 35.0% | |
AGTTGAAGATCTTGAAGATC+TGG | - | Chr2:448998-449017 | None:intergenic | 35.0% | |
CATCCATTCTTTCAAAGAGA+TGG | + | Chr2:448505-448524 | MsG0280006326.01.T01:CDS | 35.0% | |
CCTTACAACTTGCATAATTC+GGG | + | Chr2:449606-449625 | MsG0280006326.01.T01:CDS | 35.0% | |
CGGAAAAATGCAATGACAAT+CGG | - | Chr2:449109-449128 | None:intergenic | 35.0% | |
GAACTTACGATATCAACGAT+TGG | + | Chr2:448715-448734 | MsG0280006326.01.T01:CDS | 35.0% | |
GAAGTTACAAGACTGCAATT+GGG | + | Chr2:449507-449526 | MsG0280006326.01.T01:intron | 35.0% | |
GAGGGAAAAGTAAAAGGAAA+AGG | - | Chr2:448903-448922 | None:intergenic | 35.0% | |
GGATCAGATTATGGAATGTA+GGG | - | Chr2:449307-449326 | None:intergenic | 35.0% | |
TCAACTGTCTAATATAACCG+GGG | + | Chr2:449012-449031 | MsG0280006326.01.T01:intron | 35.0% | |
TCACCAAATGGATCAGATTA+TGG | - | Chr2:449316-449335 | None:intergenic | 35.0% | |
TGAAAGAATGGATGTGACAA+AGG | - | Chr2:448499-448518 | None:intergenic | 35.0% | |
TGAAAGTTGACATGTTGTAG+AGG | - | Chr2:449776-449795 | None:intergenic | 35.0% | |
TGATATCGTAAGTTCCACAA+CGG | - | Chr2:448710-448729 | None:intergenic | 35.0% | |
TGGATCAGATTATGGAATGT+AGG | - | Chr2:449308-449327 | None:intergenic | 35.0% | |
TTGAGTGAGGGAAAAGTAAA+AGG | - | Chr2:448909-448928 | None:intergenic | 35.0% | |
! | AGTCCATCTCTTTGAAAGAA+TGG | - | Chr2:448511-448530 | None:intergenic | 35.0% |
! | TTGTTGTTCTCAAGCTATGT+TGG | + | Chr2:448856-448875 | MsG0280006326.01.T01:CDS | 35.0% |
!! | CAAGCTATGTTGGTTCTTTA+TGG | + | Chr2:448866-448885 | MsG0280006326.01.T01:intron | 35.0% |
!! | TCATCTATGGTGTTTTGTTC+CGG | + | Chr2:448530-448549 | MsG0280006326.01.T01:CDS | 35.0% |
!!! | AAATGTAGGGTTTTGAGTGA+GGG | - | Chr2:448921-448940 | None:intergenic | 35.0% |
AAGGCAAGATGGAACAAATC+CGG | - | Chr2:449578-449597 | None:intergenic | 40.0% | |
AATATAGCAGTAGGCAACGT+AGG | - | Chr2:448822-448841 | None:intergenic | 40.0% | |
AGGAAAAGTTATCAACGTCG+AGG | - | Chr2:448677-448696 | None:intergenic | 40.0% | |
ATATAGCAGTAGGCAACGTA+GGG | - | Chr2:448821-448840 | None:intergenic | 40.0% | |
ATCTTCATGCTCCCGTTAAT+TGG | + | Chr2:448781-448800 | MsG0280006326.01.T01:CDS | 40.0% | |
ATGTGAATCAGAATCTCGTC+TGG | - | Chr2:448450-448469 | None:intergenic | 40.0% | |
CACGAAACTGAAAAATCGTG+AGG | + | Chr2:448569-448588 | MsG0280006326.01.T01:CDS | 40.0% | |
CCCGAATTATGCAAGTTGTA+AGG | - | Chr2:449609-449628 | None:intergenic | 40.0% | |
GACTATTATCCTCATGTCCA+AGG | + | Chr2:449749-449768 | MsG0280006326.01.T01:CDS | 40.0% | |
TCTACGTATACAACTATCGG+AGG | + | Chr2:449155-449174 | MsG0280006326.01.T01:CDS | 40.0% | |
TCTTCATGCTCCCGTTAATT+GGG | + | Chr2:448782-448801 | MsG0280006326.01.T01:CDS | 40.0% | |
TGGAATGTAGGGAAGTCATT+AGG | - | Chr2:449296-449315 | None:intergenic | 40.0% | |
! | ATTTGGTGATCAACTACGAC+GGG | + | Chr2:449327-449346 | MsG0280006326.01.T01:CDS | 40.0% |
! | CAAAGAGATGGACTCATCTA+TGG | + | Chr2:448517-448536 | MsG0280006326.01.T01:CDS | 40.0% |
! | CAAGAAAATTGGGTGGATTC+CGG | + | Chr2:449556-449575 | MsG0280006326.01.T01:CDS | 40.0% |
! | CATTTGGTGATCAACTACGA+CGG | + | Chr2:449326-449345 | MsG0280006326.01.T01:CDS | 40.0% |
!!! | CAAATGTAGGGTTTTGAGTG+AGG | - | Chr2:448922-448941 | None:intergenic | 40.0% |
!!! | GACGTTGATAACTTTTCCTC+TGG | + | Chr2:448678-448697 | MsG0280006326.01.T01:CDS | 40.0% |
!!! | GATTTTGAAGCTTAGGGCAA+TGG | - | Chr2:449376-449395 | None:intergenic | 40.0% |
AAGCAAAATCGAAATGGCCC+CGG | - | Chr2:449032-449051 | None:intergenic | 45.0% | |
ATCATTATGGTGCCTGCCAA+TGG | + | Chr2:449198-449217 | MsG0280006326.01.T01:intron | 45.0% | |
CGTCGTAGTTGATCACCAAA+TGG | - | Chr2:449328-449347 | None:intergenic | 45.0% | |
GTCGAGGATGAAACTGTTGA+TGG | - | Chr2:448661-448680 | None:intergenic | 45.0% | |
GTTACAAGACTGCAATTGGG+AGG | + | Chr2:449510-449529 | MsG0280006326.01.T01:CDS | 45.0% | |
TATAGCAGTAGGCAACGTAG+GGG | - | Chr2:448820-448839 | None:intergenic | 45.0% | |
TTTCATTCGCGAGACTGCTT+CGG | + | Chr2:448627-448646 | MsG0280006326.01.T01:CDS | 45.0% | |
! | CAACGATTGGGTCGACATTT+TGG | + | Chr2:448728-448747 | MsG0280006326.01.T01:CDS | 45.0% |
! | GGATGTGACAAAGGCTTGTT+TGG | - | Chr2:448490-448509 | None:intergenic | 45.0% |
! | TTTGAAGCTTAGGGCAATGG+TGG | - | Chr2:449373-449392 | None:intergenic | 45.0% |
! | TTTGGTGATCAACTACGACG+GGG | + | Chr2:449328-449347 | MsG0280006326.01.T01:CDS | 45.0% |
ATAGCAGTAGGCAACGTAGG+GGG | - | Chr2:448819-448838 | None:intergenic | 50.0% | |
ATTCGGGACTTCGCATTTGC+AGG | + | Chr2:449622-449641 | MsG0280006326.01.T01:CDS | 50.0% | |
GTTCGAACACAGCATGTCGA+TGG | + | Chr2:448401-448420 | MsG0280006326.01.T01:CDS | 50.0% | |
TGACATGTTGTAGAGGCCCT+TGG | - | Chr2:449769-449788 | None:intergenic | 50.0% | |
! | GTGTCGCTGAAGTCAAGATC+CGG | - | Chr2:448552-448571 | None:intergenic | 50.0% |
! | TCGATGGCGGTAGATAGGAT+CGG | + | Chr2:448417-448436 | MsG0280006326.01.T01:CDS | 50.0% |
CGAACACAGCATGTCGATGG+CGG | + | Chr2:448404-448423 | MsG0280006326.01.T01:CDS | 55.0% | |
TCCACAACGGAGAAGTCCAG+AGG | - | Chr2:448697-448716 | None:intergenic | 55.0% | |
TCCTCTGGACTTCTCCGTTG+TGG | + | Chr2:448693-448712 | MsG0280006326.01.T01:CDS | 55.0% | |
TGTAGAGGCCCTTGGACATG+AGG | - | Chr2:449761-449780 | None:intergenic | 55.0% | |
! | GCATGTCGATGGCGGTAGAT+AGG | + | Chr2:448412-448431 | MsG0280006326.01.T01:CDS | 55.0% |
CGCGAGACTGCTTCGGTTCT+CGG | + | Chr2:448634-448653 | MsG0280006326.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 448399 | 449804 | 448399 | ID=MsG0280006326.01;Name=MsG0280006326.01 |
Chr2 | mRNA | 448399 | 449804 | 448399 | ID=MsG0280006326.01.T01;Parent=MsG0280006326.01;Name=MsG0280006326.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|4|0|335 |
Chr2 | exon | 448399 | 448877 | 448399 | ID=MsG0280006326.01.T01:exon:638;Parent=MsG0280006326.01.T01 |
Chr2 | exon | 449071 | 449176 | 449071 | ID=MsG0280006326.01.T01:exon:639;Parent=MsG0280006326.01.T01 |
Chr2 | exon | 449284 | 449409 | 449284 | ID=MsG0280006326.01.T01:exon:640;Parent=MsG0280006326.01.T01 |
Chr2 | exon | 449508 | 449804 | 449508 | ID=MsG0280006326.01.T01:exon:641;Parent=MsG0280006326.01.T01 |
Chr2 | CDS | 448399 | 448877 | 448399 | ID=MsG0280006326.01.T01:cds;Parent=MsG0280006326.01.T01 |
Chr2 | CDS | 449071 | 449176 | 449071 | ID=MsG0280006326.01.T01:cds;Parent=MsG0280006326.01.T01 |
Chr2 | CDS | 449284 | 449409 | 449284 | ID=MsG0280006326.01.T01:cds;Parent=MsG0280006326.01.T01 |
Chr2 | CDS | 449508 | 449804 | 449508 | ID=MsG0280006326.01.T01:cds;Parent=MsG0280006326.01.T01 |
Gene Sequence |
Protein sequence |