Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019590.01.T01 | GAU45690.1 | 66.667 | 123 | 26 | 1 | 1 | 123 | 1 | 108 | 2.37E-49 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019590.01.T01 | Q9M1S3 | 41.6 | 125 | 51 | 2 | 5 | 122 | 6 | 115 | 4.16E-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019590.01.T01 | A0A1S2YL98 | 65.323 | 124 | 28 | 1 | 1 | 124 | 1 | 109 | 6.53e-48 | 164 |
| MsG0480019590.01.T01 | A0A2Z6P8E8 | 66.667 | 123 | 26 | 1 | 1 | 123 | 1 | 108 | 1.13e-49 | 163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048700.01 | MsG0480019590.01 | 0.829489 | 5.002480e-55 | 5.127459e-52 |
| MsG0080048952.01 | MsG0480019590.01 | 0.808249 | 3.398590e-50 | 1.933692e-47 |
| MsG0180000197.01 | MsG0480019590.01 | 0.806540 | 7.828787e-50 | 4.260329e-47 |
| MsG0180000300.01 | MsG0480019590.01 | 0.817491 | 3.207492e-52 | 2.339340e-49 |
| MsG0180000555.01 | MsG0480019590.01 | 0.815499 | 8.958741e-52 | 6.187367e-49 |
| MsG0180000585.01 | MsG0480019590.01 | 0.802170 | 6.369998e-49 | 3.099093e-46 |
| MsG0180000741.01 | MsG0480019590.01 | 0.813793 | 2.138387e-51 | 1.409947e-48 |
| MsG0180001173.01 | MsG0480019590.01 | 0.803291 | 3.738738e-49 | 1.871670e-46 |
| MsG0180001178.01 | MsG0480019590.01 | 0.831311 | 1.793369e-55 | 1.938770e-52 |
| MsG0180001565.01 | MsG0480019590.01 | 0.818374 | 2.026998e-52 | 1.514708e-49 |
| MsG0180001566.01 | MsG0480019590.01 | 0.840805 | 6.968072e-58 | 1.003975e-54 |
| MsG0180002071.01 | MsG0480019590.01 | 0.826309 | 2.911156e-54 | 2.720132e-51 |
| MsG0180003444.01 | MsG0480019590.01 | 0.814941 | 1.192297e-51 | 8.109183e-49 |
| MsG0180004147.01 | MsG0480019590.01 | 0.802916 | 4.470712e-49 | 2.216839e-46 |
| MsG0180004357.01 | MsG0480019590.01 | 0.821638 | 3.629124e-53 | 2.969109e-50 |
| MsG0180005559.01 | MsG0480019590.01 | 0.814727 | 1.329652e-51 | 8.991781e-49 |
| MsG0180006023.01 | MsG0480019590.01 | 0.831569 | 1.549794e-55 | 1.688495e-52 |
| MsG0180006235.01 | MsG0480019590.01 | 0.815806 | 7.652787e-52 | 5.329814e-49 |
| MsG0180006260.01 | MsG0480019590.01 | 0.803683 | 3.101513e-49 | 1.568384e-46 |
| MsG0280010614.01 | MsG0480019590.01 | 0.810693 | 1.015099e-50 | 6.160907e-48 |
| MsG0280010735.01 | MsG0480019590.01 | 0.809766 | 1.609064e-50 | 9.530415e-48 |
| MsG0280010868.01 | MsG0480019590.01 | 0.804660 | 1.941521e-49 | 1.006808e-46 |
| MsG0280011085.01 | MsG0480019590.01 | 0.806992 | 6.281938e-50 | 3.458574e-47 |
| MsG0280011285.01 | MsG0480019590.01 | 0.804847 | 1.774502e-49 | 9.247126e-47 |
| MsG0280011293.01 | MsG0480019590.01 | 0.817968 | 2.504081e-52 | 1.850202e-49 |
| MsG0280011336.01 | MsG0480019590.01 | 0.805448 | 1.328650e-49 | 7.030981e-47 |
| MsG0380012033.01 | MsG0480019590.01 | 0.805529 | 1.277511e-49 | 6.774369e-47 |
| MsG0380013548.01 | MsG0480019590.01 | 0.819260 | 1.275091e-52 | 9.763649e-50 |
| MsG0380014903.01 | MsG0480019590.01 | 0.812588 | 3.930785e-51 | 2.509194e-48 |
| MsG0480019034.01 | MsG0480019590.01 | 0.830696 | 2.540026e-55 | 2.696568e-52 |
| MsG0480019590.01 | MsG0480020242.01 | 0.825798 | 3.850257e-54 | 3.545859e-51 |
| MsG0480019590.01 | MsG0480021784.01 | 0.805099 | 1.572108e-49 | 8.245087e-47 |
| MsG0480019590.01 | MsG0480021900.01 | 0.809079 | 2.258769e-50 | 1.313551e-47 |
| MsG0480019590.01 | MsG0480022094.01 | 0.821847 | 3.248256e-53 | 2.673401e-50 |
| MsG0480019590.01 | MsG0480022228.01 | 0.803430 | 3.498826e-49 | 1.757889e-46 |
| MsG0480019590.01 | MsG0480022325.01 | 0.803902 | 2.793081e-49 | 1.420496e-46 |
| MsG0480019590.01 | MsG0480022598.01 | 0.810669 | 1.027309e-50 | 6.231024e-48 |
| MsG0480019590.01 | MsG0480022719.01 | 0.808159 | 3.551574e-50 | 2.015927e-47 |
| MsG0480019590.01 | MsG0480023421.01 | 0.801752 | 7.763384e-49 | 3.736908e-46 |
| MsG0480019590.01 | MsG0480023500.01 | 0.811509 | 6.757545e-51 | 4.190947e-48 |
| MsG0480019590.01 | MsG0480023873.01 | 0.810393 | 1.178964e-50 | 7.097836e-48 |
| MsG0480019590.01 | MsG0580024157.01 | 0.832116 | 1.135514e-55 | 1.257068e-52 |
| MsG0480019590.01 | MsG0580024563.01 | 0.802028 | 6.811674e-49 | 3.302025e-46 |
| MsG0480019590.01 | MsG0580024682.01 | 0.805440 | 1.333523e-49 | 7.055348e-47 |
| MsG0480019590.01 | MsG0580024960.01 | 0.806941 | 6.442525e-50 | 3.542300e-47 |
| MsG0480019590.01 | MsG0580025184.01 | 0.805556 | 1.260699e-49 | 6.689880e-47 |
| MsG0480019590.01 | MsG0580025352.01 | 0.861889 | 7.467324e-64 | 2.145048e-60 |
| MsG0480019590.01 | MsG0580025614.01 | 0.802879 | 4.549906e-49 | 2.253943e-46 |
| MsG0480019590.01 | MsG0580027208.01 | 0.847136 | 1.399701e-59 | 2.464199e-56 |
| MsG0480019590.01 | MsG0680030672.01 | 0.801844 | 7.433718e-49 | 3.586810e-46 |
| MsG0480019590.01 | MsG0680030684.01 | 0.806504 | 7.964712e-50 | 4.330326e-47 |
| MsG0480019590.01 | MsG0680030740.01 | 0.808687 | 2.740536e-50 | 1.577114e-47 |
| MsG0480019590.01 | MsG0680034757.01 | 0.805199 | 1.498242e-49 | 7.877958e-47 |
| MsG0480019590.01 | MsG0680035764.01 | 0.813789 | 2.142503e-51 | 1.412506e-48 |
| MsG0480019590.01 | MsG0780036773.01 | 0.805615 | 1.225775e-49 | 6.514434e-47 |
| MsG0480019590.01 | MsG0780037975.01 | 0.822071 | 2.881968e-53 | 2.386882e-50 |
| MsG0480019590.01 | MsG0780038649.01 | 0.825888 | 3.665628e-54 | 3.384474e-51 |
| MsG0480019590.01 | MsG0780039389.01 | 0.809943 | 1.474004e-50 | 8.770558e-48 |
| MsG0480019590.01 | MsG0780039654.01 | 0.826186 | 3.114752e-54 | 2.900216e-51 |
| MsG0480019590.01 | MsG0780039655.01 | 0.830862 | 2.311774e-55 | 2.466250e-52 |
| MsG0480019590.01 | MsG0780039712.01 | 0.848147 | 7.377327e-60 | 1.340956e-56 |
| MsG0480019590.01 | MsG0780040488.01 | 0.872613 | 2.779033e-67 | 1.170438e-63 |
| MsG0480019590.01 | MsG0780041033.01 | 0.808058 | 3.732113e-50 | 2.112632e-47 |
| MsG0480019590.01 | MsG0780041078.01 | 0.804034 | 2.621161e-49 | 1.337581e-46 |
| MsG0480019590.01 | MsG0780041469.01 | 0.801927 | 7.145548e-49 | 3.454985e-46 |
| MsG0480019590.01 | MsG0780041787.01 | 0.809020 | 2.325912e-50 | 1.350392e-47 |
| MsG0480019590.01 | MsG0880041860.01 | 0.816271 | 6.026101e-52 | 4.250730e-49 |
| MsG0480019590.01 | MsG0880042547.01 | 0.803604 | 3.220737e-49 | 1.625449e-46 |
| MsG0480019590.01 | MsG0880043547.01 | 0.809698 | 1.663917e-50 | 9.837233e-48 |
| MsG0480019590.01 | MsG0880043921.01 | 0.819137 | 1.359898e-52 | 1.037723e-49 |
| MsG0480019590.01 | MsG0880044917.01 | 0.813353 | 2.672113e-51 | 1.741009e-48 |
| MsG0480019590.01 | MsG0880046027.01 | 0.819481 | 1.135469e-52 | 8.748606e-50 |
| MsG0480019590.01 | MsG0880046762.01 | 0.828457 | 8.896084e-55 | 8.847546e-52 |
| MsG0480019590.01 | MsG0880047226.01 | 0.808613 | 2.841362e-50 | 1.631977e-47 |
| MsG0480019590.01 | MsG0880047293.01 | 0.845390 | 4.184754e-59 | 6.963075e-56 |
| MsG0380015468.01 | MsG0480019590.01 | 0.803869 | 2.836789e-49 | 1.441523e-46 |
| MsG0380015713.01 | MsG0480019590.01 | 0.803328 | 3.673955e-49 | 1.840969e-46 |
| MsG0380016994.01 | MsG0480019590.01 | 0.819465 | 1.144897e-52 | 8.817322e-50 |
| MsG0380017045.01 | MsG0480019590.01 | 0.807957 | 3.921714e-50 | 2.214129e-47 |
| MsG0380017177.01 | MsG0480019590.01 | 0.832135 | 1.123322e-55 | 1.244280e-52 |
| MsG0380017195.01 | MsG0480019590.01 | 0.825071 | 5.725805e-54 | 5.164875e-51 |
| MsG0480018256.01 | MsG0480019590.01 | 0.801207 | 1.004056e-48 | 4.767086e-46 |
| MsG0280007089.01 | MsG0480019590.01 | 0.805158 | 1.527740e-49 | 8.024701e-47 |
| MsG0280007609.01 | MsG0480019590.01 | 0.810307 | 1.230405e-50 | 7.390741e-48 |
| MsG0280007740.01 | MsG0480019590.01 | 0.800183 | 1.624193e-48 | 7.513766e-46 |
| MsG0280007764.01 | MsG0480019590.01 | 0.803860 | 2.849200e-49 | 1.447449e-46 |
| MsG0280007790.01 | MsG0480019590.01 | 0.821525 | 3.855139e-53 | 3.143853e-50 |
| MsG0280008270.01 | MsG0480019590.01 | 0.808930 | 2.431098e-50 | 1.408049e-47 |
| MsG0280008280.01 | MsG0480019590.01 | 0.809146 | 2.185304e-50 | 1.273137e-47 |
| MsG0280009514.01 | MsG0480019590.01 | 0.822281 | 2.576455e-53 | 2.146951e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019590.01.T01 | MTR_4g035310 | 67.213 | 122 | 25 | 1 | 1 | 122 | 1 | 107 | 3.25e-51 | 163 |
| MsG0480019590.01.T01 | MTR_4g035310 | 67.213 | 122 | 25 | 1 | 1 | 122 | 1 | 107 | 3.38e-51 | 163 |
| MsG0480019590.01.T01 | MTR_3g116130 | 49.057 | 106 | 39 | 1 | 10 | 115 | 23 | 113 | 4.88e-28 | 103 |
| MsG0480019590.01.T01 | MTR_3g116130 | 49.057 | 106 | 39 | 1 | 10 | 115 | 23 | 113 | 6.32e-27 | 102 |
| MsG0480019590.01.T01 | MTR_8g024520 | 44.444 | 117 | 50 | 2 | 5 | 121 | 14 | 115 | 1.86e-26 | 100 |
| MsG0480019590.01.T01 | MTR_8g024520 | 44.444 | 117 | 50 | 2 | 5 | 121 | 14 | 115 | 1.92e-26 | 100 |
| MsG0480019590.01.T01 | MTR_5g064120 | 45.000 | 100 | 40 | 1 | 9 | 108 | 9 | 93 | 6.46e-23 | 90.9 |
| MsG0480019590.01.T01 | MTR_3g092490 | 39.623 | 106 | 46 | 2 | 11 | 116 | 21 | 108 | 3.72e-20 | 81.3 |
| MsG0480019590.01.T01 | MTR_7g117495 | 41.346 | 104 | 46 | 1 | 9 | 112 | 11 | 99 | 9.24e-20 | 82.0 |
| MsG0480019590.01.T01 | MTR_7g117495 | 41.346 | 104 | 46 | 1 | 9 | 112 | 11 | 99 | 1.10e-19 | 81.6 |
| MsG0480019590.01.T01 | MTR_3g092490 | 39.623 | 106 | 46 | 2 | 11 | 116 | 21 | 108 | 1.21e-19 | 81.6 |
| MsG0480019590.01.T01 | MTR_3g092490 | 39.623 | 106 | 46 | 2 | 11 | 116 | 21 | 108 | 1.27e-19 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019590.01.T01 | AT1G22910 | 55.357 | 112 | 35 | 1 | 11 | 122 | 8 | 104 | 5.54e-35 | 121 |
| MsG0480019590.01.T01 | AT1G22910 | 55.357 | 112 | 35 | 1 | 11 | 122 | 8 | 104 | 9.36e-35 | 120 |
| MsG0480019590.01.T01 | AT1G22910 | 55.357 | 112 | 35 | 1 | 11 | 122 | 8 | 104 | 1.04e-33 | 120 |
| MsG0480019590.01.T01 | AT1G33470 | 46.903 | 113 | 45 | 1 | 12 | 124 | 3 | 100 | 6.48e-30 | 108 |
| MsG0480019590.01.T01 | AT1G33470 | 46.903 | 113 | 45 | 1 | 12 | 124 | 3 | 100 | 7.23e-30 | 108 |
| MsG0480019590.01.T01 | AT1G33470 | 46.903 | 113 | 45 | 1 | 12 | 124 | 3 | 100 | 7.32e-30 | 108 |
| MsG0480019590.01.T01 | AT1G20880 | 50.000 | 106 | 36 | 2 | 10 | 115 | 18 | 106 | 3.03e-27 | 102 |
| MsG0480019590.01.T01 | AT1G20880 | 50.000 | 106 | 36 | 2 | 10 | 115 | 18 | 106 | 3.03e-27 | 102 |
| MsG0480019590.01.T01 | AT1G20880 | 50.000 | 106 | 36 | 2 | 10 | 115 | 18 | 106 | 3.03e-27 | 102 |
| MsG0480019590.01.T01 | AT1G76460 | 47.706 | 109 | 40 | 2 | 10 | 118 | 18 | 109 | 2.13e-26 | 100 |
| MsG0480019590.01.T01 | AT2G46780 | 44.144 | 111 | 46 | 2 | 12 | 121 | 18 | 113 | 5.93e-25 | 97.1 |
| MsG0480019590.01.T01 | AT2G46780 | 44.144 | 111 | 46 | 2 | 12 | 121 | 18 | 113 | 5.93e-25 | 97.1 |
| MsG0480019590.01.T01 | AT1G22330 | 42.727 | 110 | 46 | 2 | 10 | 119 | 11 | 103 | 5.41e-23 | 91.3 |
| MsG0480019590.01.T01 | AT1G78260 | 43.434 | 99 | 41 | 1 | 10 | 108 | 11 | 94 | 2.69e-21 | 86.3 |
| MsG0480019590.01.T01 | AT1G78260 | 43.434 | 99 | 41 | 1 | 10 | 108 | 11 | 94 | 3.26e-21 | 86.3 |
| MsG0480019590.01.T01 | AT3G54770 | 41.600 | 125 | 51 | 2 | 5 | 122 | 6 | 115 | 4.24e-21 | 85.5 |
| MsG0480019590.01.T01 | AT3G54770 | 41.600 | 125 | 51 | 2 | 5 | 122 | 6 | 115 | 4.78e-21 | 85.5 |
| MsG0480019590.01.T01 | AT1G22910 | 82.222 | 45 | 8 | 0 | 77 | 121 | 8 | 52 | 8.53e-21 | 83.6 |
Find 23 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTCCTGCCAAATTAAT+TGG | 0.140954 | 4:+22855718 | None:intergenic |
| CAACATGACTCCAATTAATT+TGG | 0.208507 | 4:-22855728 | None:intergenic |
| TAACTGCAACCTTGCTTCTT+TGG | 0.220641 | 4:-22855069 | MsG0480019590.01.T01:CDS |
| ATTAATTTGGCAGGACAATT+TGG | 0.230601 | 4:-22855715 | MsG0480019590.01.T01:CDS |
| AACTGCAACCTTGCTTCTTT+GGG | 0.243448 | 4:-22855068 | MsG0480019590.01.T01:CDS |
| GAAGAAGTATTTGAGCAATT+TGG | 0.290026 | 4:-22855629 | MsG0480019590.01.T01:CDS |
| GTGTTGAAGGCTTAGATCTT+TGG | 0.295951 | 4:+22855042 | None:intergenic |
| GCTCTCCTACCATCAATTAT+AGG | 0.326846 | 4:+22855092 | None:intergenic |
| ATATTAATATTACCATGTTT+TGG | 0.333370 | 4:+22855020 | None:intergenic |
| ATTGCTCAAATACTTCTTCA+TGG | 0.339874 | 4:+22855633 | None:intergenic |
| TGAGCAATTTGGTGAGATCT+TGG | 0.411455 | 4:-22855618 | MsG0480019590.01.T01:CDS |
| ACATACAAATCCATAGCCTT+TGG | 0.439269 | 4:+22855559 | None:intergenic |
| ATGACTCCAATTAATTTGGC+AGG | 0.491636 | 4:-22855724 | MsG0480019590.01.T01:CDS |
| CAAGCTCTCATAGCAGCATC+AGG | 0.508307 | 4:+22855128 | None:intergenic |
| GATGCTGCTCCTATAATTGA+TGG | 0.515656 | 4:-22855101 | MsG0480019590.01.T01:CDS |
| ACTGGAAGATCCAAAGGCTA+TGG | 0.530867 | 4:-22855569 | MsG0480019590.01.T01:CDS |
| ATAGCCTTTGGATCTTCCAG+TGG | 0.554952 | 4:+22855571 | None:intergenic |
| TGCTGCTATGAGAGCTTGTG+TGG | 0.555924 | 4:-22855123 | MsG0480019590.01.T01:CDS |
| CTGCTCCTATAATTGATGGT+AGG | 0.595874 | 4:-22855097 | MsG0480019590.01.T01:CDS |
| GTTATCACTGACAAAGCCAC+TGG | 0.609344 | 4:-22855587 | MsG0480019590.01.T01:CDS |
| TTTGGACACCCAAAGAAGCA+AGG | 0.627687 | 4:+22855060 | None:intergenic |
| AAAGCCACTGGAAGATCCAA+AGG | 0.627799 | 4:-22855575 | MsG0480019590.01.T01:CDS |
| AAGCCTTCAACACCAAAACA+TGG | 0.645444 | 4:-22855032 | MsG0480019590.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATAAAAAAAATACAAA+TGG | + | Chr4:22855520-22855539 | None:intergenic | 10.0% |
| !!! | CATTTGTATTTTTTTTATTT+TGG | - | Chr4:22855518-22855537 | MsG0480019590.01.T01:intron | 10.0% |
| !! | TAATTTATTATTCAAGTAGA+AGG | - | Chr4:22855263-22855282 | MsG0480019590.01.T01:intron | 15.0% |
| !!! | ATATTAATATTACCATGTTT+TGG | + | Chr4:22855720-22855739 | None:intergenic | 15.0% |
| !!! | AATTTGTTTGTTTCCAATTT+AGG | - | Chr4:22855572-22855591 | MsG0480019590.01.T01:CDS | 20.0% |
| AATTGTCCTGCCAAATTAAT+TGG | + | Chr4:22855022-22855041 | None:intergenic | 30.0% | |
| ATTGCTCAAATACTTCTTCA+TGG | + | Chr4:22855107-22855126 | None:intergenic | 30.0% | |
| CTAGTGAAAGAAACTAAACA+TGG | + | Chr4:22855433-22855452 | None:intergenic | 30.0% | |
| TAATCCTCCAACAAAAACTT+TGG | + | Chr4:22855062-22855081 | None:intergenic | 30.0% | |
| ! | ACATACACCAAAGTTTTTGT+TGG | - | Chr4:22855052-22855071 | MsG0480019590.01.T01:CDS | 30.0% |
| ! | ATTAATTTGGCAGGACAATT+TGG | - | Chr4:22855022-22855041 | MsG0480019590.01.T01:CDS | 30.0% |
| !! | GAAGAAGTATTTGAGCAATT+TGG | - | Chr4:22855108-22855127 | MsG0480019590.01.T01:CDS | 30.0% |
| ACATACAAATCCATAGCCTT+TGG | + | Chr4:22855181-22855200 | None:intergenic | 35.0% | |
| GATTGAATCTCAATGAATCG+TGG | - | Chr4:22855358-22855377 | MsG0480019590.01.T01:intron | 35.0% | |
| TCACGAAAAGTGACCTAAAT+TGG | + | Chr4:22855588-22855607 | None:intergenic | 35.0% | |
| ! | ATGACTCCAATTAATTTGGC+AGG | - | Chr4:22855013-22855032 | MsG0480019590.01.T01:CDS | 35.0% |
| ! | TACACCAAAGTTTTTGTTGG+AGG | - | Chr4:22855055-22855074 | MsG0480019590.01.T01:CDS | 35.0% |
| !!! | TTACCATGTTTTGGTGTTGA+AGG | + | Chr4:22855711-22855730 | None:intergenic | 35.0% |
| !!! | TTTTGTTGGAGGATTAGCTT+GGG | - | Chr4:22855066-22855085 | MsG0480019590.01.T01:CDS | 35.0% |
| !!! | TTTTTGTTGGAGGATTAGCT+TGG | - | Chr4:22855065-22855084 | MsG0480019590.01.T01:CDS | 35.0% |
| AACTGCAACCTTGCTTCTTT+GGG | - | Chr4:22855669-22855688 | MsG0480019590.01.T01:CDS | 40.0% | |
| AAGCCTTCAACACCAAAACA+TGG | - | Chr4:22855705-22855724 | MsG0480019590.01.T01:CDS | 40.0% | |
| GATGCTGCTCCTATAATTGA+TGG | - | Chr4:22855636-22855655 | MsG0480019590.01.T01:CDS | 40.0% | |
| GCTCTCCTACCATCAATTAT+AGG | + | Chr4:22855648-22855667 | None:intergenic | 40.0% | |
| GTGTTGAAGGCTTAGATCTT+TGG | + | Chr4:22855698-22855717 | None:intergenic | 40.0% | |
| TAACTGCAACCTTGCTTCTT+TGG | - | Chr4:22855668-22855687 | MsG0480019590.01.T01:CDS | 40.0% | |
| ! | CTGCTCCTATAATTGATGGT+AGG | - | Chr4:22855640-22855659 | MsG0480019590.01.T01:CDS | 40.0% |
| ! | TGAGCAATTTGGTGAGATCT+TGG | - | Chr4:22855119-22855138 | MsG0480019590.01.T01:CDS | 40.0% |
| AAAGCCACTGGAAGATCCAA+AGG | - | Chr4:22855162-22855181 | MsG0480019590.01.T01:intron | 45.0% | |
| ACTGGAAGATCCAAAGGCTA+TGG | - | Chr4:22855168-22855187 | MsG0480019590.01.T01:intron | 45.0% | |
| ATAGCCTTTGGATCTTCCAG+TGG | + | Chr4:22855169-22855188 | None:intergenic | 45.0% | |
| GTTATCACTGACAAAGCCAC+TGG | - | Chr4:22855150-22855169 | MsG0480019590.01.T01:intron | 45.0% | |
| TTTGGACACCCAAAGAAGCA+AGG | + | Chr4:22855680-22855699 | None:intergenic | 45.0% | |
| CAAGCTCTCATAGCAGCATC+AGG | + | Chr4:22855612-22855631 | None:intergenic | 50.0% | |
| TGCTGCTATGAGAGCTTGTG+TGG | - | Chr4:22855614-22855633 | MsG0480019590.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 22855013 | 22855746 | 22855013 | ID=MsG0480019590.01;Name=MsG0480019590.01 |
| Chr4 | mRNA | 22855013 | 22855746 | 22855013 | ID=MsG0480019590.01.T01;Parent=MsG0480019590.01;Name=MsG0480019590.01.T01;_AED=0.48;_eAED=0.63;_QI=0|0|0|1|0|0.5|2|0|126 |
| Chr4 | exon | 22855519 | 22855746 | 22855519 | ID=MsG0480019590.01.T01:exon:10743;Parent=MsG0480019590.01.T01 |
| Chr4 | exon | 22855013 | 22855165 | 22855013 | ID=MsG0480019590.01.T01:exon:10742;Parent=MsG0480019590.01.T01 |
| Chr4 | CDS | 22855519 | 22855746 | 22855519 | ID=MsG0480019590.01.T01:cds;Parent=MsG0480019590.01.T01 |
| Chr4 | CDS | 22855013 | 22855165 | 22855013 | ID=MsG0480019590.01.T01:cds;Parent=MsG0480019590.01.T01 |
| Gene Sequence |
| Protein sequence |
