Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000300.01.T01 | XP_024636078.1 | 44.951 | 307 | 67 | 8 | 1 | 230 | 1 | 282 | 2.34E-55 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000300.01.T01 | Q3ECW2 | 56.061 | 132 | 30 | 4 | 99 | 230 | 183 | 286 | 1.03E-36 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0180000300.01 | 0.801744 | 7.793241e-49 | 3.750491e-46 |
| MsG0080048602.01 | MsG0180000300.01 | 0.828920 | 6.872889e-55 | 6.927533e-52 |
| MsG0080048700.01 | MsG0180000300.01 | 0.811199 | 7.887229e-51 | 4.851623e-48 |
| MsG0080048765.01 | MsG0180000300.01 | 0.825763 | 3.925748e-54 | 3.611634e-51 |
| MsG0080049136.01 | MsG0180000300.01 | 0.800134 | 1.661685e-48 | 7.677841e-46 |
| MsG0180000195.01 | MsG0180000300.01 | 0.806859 | 6.702862e-50 | 3.677773e-47 |
| MsG0180000196.01 | MsG0180000300.01 | 0.818851 | 1.579678e-52 | 1.196070e-49 |
| MsG0180000197.01 | MsG0180000300.01 | 0.840172 | 1.020296e-57 | 1.441545e-54 |
| MsG0180000235.01 | MsG0180000300.01 | 0.807118 | 5.908953e-50 | 3.263795e-47 |
| MsG0180000300.01 | MsG0180000353.01 | 0.810727 | 9.982912e-51 | 6.064303e-48 |
| MsG0180000300.01 | MsG0180000401.01 | 0.804347 | 2.256420e-49 | 1.160699e-46 |
| MsG0180000300.01 | MsG0180000494.01 | 0.816895 | 4.367775e-52 | 3.133848e-49 |
| MsG0180000300.01 | MsG0180000555.01 | 0.869033 | 4.192212e-66 | 1.549914e-62 |
| MsG0180000300.01 | MsG0180000585.01 | 0.821427 | 4.062005e-53 | 3.303703e-50 |
| MsG0180000300.01 | MsG0180000741.01 | 0.854785 | 9.768934e-62 | 2.207094e-58 |
| MsG0180000300.01 | MsG0180001173.01 | 0.808192 | 3.494169e-50 | 1.985083e-47 |
| MsG0180000300.01 | MsG0180001178.01 | 0.811207 | 7.858362e-51 | 4.834842e-48 |
| MsG0180000300.01 | MsG0180001294.01 | 0.821063 | 4.927989e-53 | 3.967920e-50 |
| MsG0180000300.01 | MsG0180001565.01 | 0.842787 | 2.088980e-58 | 3.201773e-55 |
| MsG0180000300.01 | MsG0180001566.01 | 0.832520 | 9.021079e-56 | 1.010737e-52 |
| MsG0180000300.01 | MsG0180001911.01 | 0.825475 | 4.595037e-54 | 4.192405e-51 |
| MsG0180000300.01 | MsG0180002071.01 | 0.842735 | 2.156047e-58 | 3.299172e-55 |
| MsG0180000300.01 | MsG0180002072.01 | 0.810182 | 1.308827e-50 | 7.836245e-48 |
| MsG0180000300.01 | MsG0180002074.01 | 0.839806 | 1.271246e-57 | 1.775539e-54 |
| MsG0180000300.01 | MsG0180003031.01 | 0.801410 | 9.123282e-49 | 4.353806e-46 |
| MsG0180000300.01 | MsG0180003303.01 | 0.830978 | 2.165163e-55 | 2.317781e-52 |
| MsG0180000300.01 | MsG0180003444.01 | 0.829536 | 4.872121e-55 | 5.000599e-52 |
| MsG0180000300.01 | MsG0180003928.01 | 0.803109 | 4.077768e-49 | 2.031852e-46 |
| MsG0180000300.01 | MsG0180003937.01 | 0.824407 | 8.210386e-54 | 7.265252e-51 |
| MsG0180000300.01 | MsG0180004060.01 | 0.806245 | 9.032248e-50 | 4.878657e-47 |
| MsG0180000300.01 | MsG0180004139.01 | 0.807818 | 4.197115e-50 | 2.360942e-47 |
| MsG0180000300.01 | MsG0180004147.01 | 0.802824 | 4.670362e-49 | 2.310565e-46 |
| MsG0180000300.01 | MsG0180004222.01 | 0.817731 | 2.832807e-52 | 2.079686e-49 |
| MsG0180000300.01 | MsG0180004320.01 | 0.809330 | 1.996306e-50 | 1.168721e-47 |
| MsG0180000300.01 | MsG0180004357.01 | 0.811598 | 6.462678e-51 | 4.017158e-48 |
| MsG0180000300.01 | MsG0180004388.01 | 0.812135 | 4.935991e-51 | 3.112860e-48 |
| MsG0180000300.01 | MsG0180004598.01 | 0.842088 | 3.201034e-58 | 4.800379e-55 |
| MsG0180000300.01 | MsG0180004689.01 | 0.809009 | 2.338298e-50 | 1.357201e-47 |
| MsG0180000300.01 | MsG0180004730.01 | 0.834439 | 2.994890e-56 | 3.554342e-53 |
| MsG0180000300.01 | MsG0180004989.01 | 0.844657 | 6.599263e-59 | 1.072727e-55 |
| MsG0180000300.01 | MsG0180005419.01 | 0.807419 | 5.101830e-50 | 2.840249e-47 |
| MsG0180000300.01 | MsG0180005443.01 | 0.802247 | 6.141909e-49 | 2.994076e-46 |
| MsG0180000300.01 | MsG0180005451.01 | 0.809747 | 1.623901e-50 | 9.613552e-48 |
| MsG0180000300.01 | MsG0180005504.01 | 0.832388 | 9.728103e-56 | 1.085703e-52 |
| MsG0180000300.01 | MsG0180005559.01 | 0.855835 | 4.831630e-62 | 1.130288e-58 |
| MsG0180000300.01 | MsG0180005846.01 | 0.845351 | 4.286733e-59 | 7.124024e-56 |
| MsG0180000300.01 | MsG0180005944.01 | 0.835266 | 1.855054e-56 | 2.256931e-53 |
| MsG0180000300.01 | MsG0180005985.01 | 0.809343 | 1.983060e-50 | 1.161410e-47 |
| MsG0180000300.01 | MsG0180005987.01 | 0.806956 | 6.393144e-50 | 3.516542e-47 |
| MsG0180000300.01 | MsG0180006023.01 | 0.869281 | 3.482592e-66 | 1.299501e-62 |
| MsG0180000300.01 | MsG0180006128.01 | 0.810330 | 1.216473e-50 | 7.311600e-48 |
| MsG0180000300.01 | MsG0180006186.01 | 0.819665 | 1.031013e-52 | 7.984135e-50 |
| MsG0180000300.01 | MsG0180006207.01 | 0.816384 | 5.686706e-52 | 4.023507e-49 |
| MsG0180000300.01 | MsG0180006235.01 | 0.855533 | 5.920089e-62 | 1.371042e-58 |
| MsG0180000300.01 | MsG0180006260.01 | 0.854882 | 9.154637e-62 | 2.074774e-58 |
| MsG0180000300.01 | MsG0280006425.01 | 0.850581 | 1.548219e-60 | 3.046814e-57 |
| MsG0180000300.01 | MsG0280006432.01 | 0.815375 | 9.547976e-52 | 6.571384e-49 |
| MsG0180000300.01 | MsG0280006692.01 | 0.828345 | 9.466041e-55 | 9.383083e-52 |
| MsG0180000300.01 | MsG0280007048.01 | 0.844114 | 9.234622e-59 | 1.475942e-55 |
| MsG0180000300.01 | MsG0280007087.01 | 0.817985 | 2.482557e-52 | 1.835144e-49 |
| MsG0180000300.01 | MsG0280007089.01 | 0.856149 | 3.911444e-62 | 9.246013e-59 |
| MsG0180000300.01 | MsG0280007601.01 | 0.825572 | 4.358280e-54 | 3.987547e-51 |
| MsG0180000300.01 | MsG0280007609.01 | 0.842337 | 2.749584e-58 | 4.155932e-55 |
| MsG0180000300.01 | MsG0280007764.01 | 0.810421 | 1.162152e-50 | 7.001900e-48 |
| MsG0180000300.01 | MsG0280007790.01 | 0.843203 | 1.619171e-58 | 2.514372e-55 |
| MsG0180000300.01 | MsG0280008270.01 | 0.850476 | 1.656823e-60 | 3.249337e-57 |
| MsG0180000300.01 | MsG0280008280.01 | 0.817289 | 3.562536e-52 | 2.583784e-49 |
| MsG0180000300.01 | MsG0280009448.01 | 0.803991 | 2.676688e-49 | 1.364399e-46 |
| MsG0180000300.01 | MsG0280009509.01 | 0.804211 | 2.409208e-49 | 1.234917e-46 |
| MsG0180000300.01 | MsG0280009514.01 | 0.822307 | 2.540680e-53 | 2.118657e-50 |
| MsG0180000300.01 | MsG0280009996.01 | 0.847062 | 1.466320e-59 | 2.575100e-56 |
| MsG0180000300.01 | MsG0280010001.01 | 0.810522 | 1.105638e-50 | 6.679357e-48 |
| MsG0180000300.01 | MsG0280010173.01 | 0.817082 | 3.966391e-52 | 2.860455e-49 |
| MsG0180000300.01 | MsG0280010239.01 | 0.810195 | 1.300670e-50 | 7.789856e-48 |
| MsG0180000300.01 | MsG0280010447.01 | 0.801581 | 8.414863e-49 | 4.033067e-46 |
| MsG0180000300.01 | MsG0280010459.01 | 0.827477 | 1.531051e-54 | 1.479807e-51 |
| MsG0180000300.01 | MsG0280010614.01 | 0.837165 | 6.105936e-57 | 7.864973e-54 |
| MsG0180000300.01 | MsG0280010735.01 | 0.848984 | 4.326528e-60 | 8.082096e-57 |
| MsG0180000300.01 | MsG0280010816.01 | 0.825734 | 3.988363e-54 | 3.666188e-51 |
| MsG0180000300.01 | MsG0280010868.01 | 0.864309 | 1.334468e-64 | 4.170689e-61 |
| MsG0180000300.01 | MsG0280010932.01 | 0.806597 | 7.616121e-50 | 4.150503e-47 |
| MsG0180000300.01 | MsG0280011034.01 | 0.805300 | 1.426534e-49 | 7.520397e-47 |
| MsG0180000300.01 | MsG0280011075.01 | 0.803705 | 3.068559e-49 | 1.552585e-46 |
| MsG0180000300.01 | MsG0280011085.01 | 0.845044 | 5.190543e-59 | 8.542247e-56 |
| MsG0180000300.01 | MsG0280011105.01 | 0.853958 | 1.692996e-61 | 3.722104e-58 |
| MsG0180000300.01 | MsG0280011182.01 | 0.818284 | 2.123739e-52 | 1.582902e-49 |
| MsG0180000300.01 | MsG0280011282.01 | 0.813604 | 2.353312e-51 | 1.543770e-48 |
| MsG0180000300.01 | MsG0280011285.01 | 0.823427 | 1.393582e-53 | 1.199455e-50 |
| MsG0180000300.01 | MsG0280011293.01 | 0.822336 | 2.501643e-53 | 2.087881e-50 |
| MsG0180000300.01 | MsG0280011336.01 | 0.851974 | 6.257637e-61 | 1.288087e-57 |
| MsG0180000300.01 | MsG0380011721.01 | 0.811133 | 8.152985e-51 | 5.006380e-48 |
| MsG0180000300.01 | MsG0380012020.01 | 0.803339 | 3.655377e-49 | 1.832160e-46 |
| MsG0180000300.01 | MsG0380012033.01 | 0.832042 | 1.184446e-55 | 1.308545e-52 |
| MsG0180000300.01 | MsG0380012124.01 | 0.822393 | 2.426972e-53 | 2.028901e-50 |
| MsG0180000300.01 | MsG0380012458.01 | 0.806253 | 8.999821e-50 | 4.861988e-47 |
| MsG0180000300.01 | MsG0380013548.01 | 0.822187 | 2.708553e-53 | 2.250727e-50 |
| MsG0180000300.01 | MsG0380014118.01 | 0.806193 | 9.265952e-50 | 4.998131e-47 |
| MsG0180000300.01 | MsG0380014162.01 | -0.806210 | 9.188677e-50 | 4.958659e-47 |
| MsG0180000300.01 | MsG0380014573.01 | 0.801528 | 8.627634e-49 | 4.129648e-46 |
| MsG0180000300.01 | MsG0380014903.01 | 0.864326 | 1.317664e-64 | 4.120577e-61 |
| MsG0180000300.01 | MsG0380015495.01 | 0.829288 | 5.597399e-55 | 5.704815e-52 |
| MsG0180000300.01 | MsG0380015702.01 | 0.847637 | 1.019408e-59 | 1.823515e-56 |
| MsG0180000300.01 | MsG0380015713.01 | 0.814920 | 1.204726e-51 | 8.189034e-49 |
| MsG0180000300.01 | MsG0380015924.01 | 0.808849 | 2.530570e-50 | 1.462535e-47 |
| MsG0180000300.01 | MsG0380016227.01 | 0.831209 | 1.900583e-55 | 2.048396e-52 |
| MsG0180000300.01 | MsG0380016971.01 | 0.856000 | 4.323617e-62 | 1.017018e-58 |
| MsG0180000300.01 | MsG0380016994.01 | 0.806643 | 7.444339e-50 | 4.061628e-47 |
| MsG0180000300.01 | MsG0380017045.01 | 0.836326 | 9.992035e-57 | 1.255157e-53 |
| MsG0180000300.01 | MsG0380017077.01 | 0.829321 | 5.495885e-55 | 5.606608e-52 |
| MsG0180000300.01 | MsG0380017139.01 | 0.806575 | 7.695782e-50 | 4.191627e-47 |
| MsG0180000300.01 | MsG0380017177.01 | 0.806588 | 7.648823e-50 | 4.167356e-47 |
| MsG0180000300.01 | MsG0380017195.01 | 0.825653 | 4.167836e-54 | 3.822351e-51 |
| MsG0180000300.01 | MsG0380017228.01 | 0.800764 | 1.236533e-48 | 5.805362e-46 |
| MsG0180000300.01 | MsG0380017232.01 | 0.814500 | 1.492437e-51 | 1.003163e-48 |
| MsG0180000300.01 | MsG0380017375.01 | 0.823255 | 1.528101e-53 | 1.308936e-50 |
| MsG0180000300.01 | MsG0380017410.01 | 0.840723 | 7.323713e-58 | 1.052476e-54 |
| MsG0180000300.01 | MsG0380017604.01 | 0.816325 | 5.862788e-52 | 4.141621e-49 |
| MsG0180000300.01 | MsG0380017631.01 | 0.813202 | 2.883507e-51 | 1.870883e-48 |
| MsG0180000300.01 | MsG0380017881.01 | 0.832194 | 1.086522e-55 | 1.205613e-52 |
| MsG0180000300.01 | MsG0380017946.01 | 0.826131 | 3.210441e-54 | 2.984569e-51 |
| MsG0180000300.01 | MsG0480018230.01 | 0.822649 | 2.115314e-53 | 1.781284e-50 |
| MsG0180000300.01 | MsG0480018256.01 | 0.849780 | 2.596425e-60 | 4.976981e-57 |
| MsG0180000300.01 | MsG0480018289.01 | 0.801472 | 8.861501e-49 | 4.235533e-46 |
| MsG0180000300.01 | MsG0480018460.01 | 0.805681 | 1.187081e-49 | 6.319848e-47 |
| MsG0180000300.01 | MsG0480018637.01 | 0.811571 | 6.550469e-51 | 4.068987e-48 |
| MsG0180000300.01 | MsG0480018640.01 | 0.821001 | 5.091914e-53 | 4.092977e-50 |
| MsG0180000300.01 | MsG0480018787.01 | 0.810101 | 1.362313e-50 | 8.139879e-48 |
| MsG0180000300.01 | MsG0480018846.01 | 0.842092 | 3.193676e-58 | 4.789989e-55 |
| MsG0180000300.01 | MsG0480019034.01 | 0.841045 | 6.027697e-58 | 8.748567e-55 |
| MsG0180000300.01 | MsG0480019395.01 | 0.843059 | 1.768279e-58 | 2.733368e-55 |
| MsG0180000300.01 | MsG0480019590.01 | 0.817491 | 3.207492e-52 | 2.339340e-49 |
| MsG0180000300.01 | MsG0480019927.01 | 0.804108 | 2.530685e-49 | 1.293805e-46 |
| MsG0180000300.01 | MsG0480020242.01 | 0.868446 | 6.491513e-66 | 2.348460e-62 |
| MsG0180000300.01 | MsG0480020371.01 | 0.855793 | 4.968643e-62 | 1.160795e-58 |
| MsG0180000300.01 | MsG0480020540.01 | 0.800370 | 1.488064e-48 | 6.917038e-46 |
| MsG0180000300.01 | MsG0480020591.01 | 0.805018 | 1.634506e-49 | 8.554526e-47 |
| MsG0180000300.01 | MsG0480021156.01 | 0.806627 | 7.505044e-50 | 4.092974e-47 |
| MsG0180000300.01 | MsG0480021772.01 | 0.804429 | 2.169507e-49 | 1.118303e-46 |
| MsG0180000300.01 | MsG0480021778.01 | 0.816665 | 4.919937e-52 | 3.507896e-49 |
| MsG0180000300.01 | MsG0480021784.01 | 0.820705 | 5.956093e-53 | 4.747646e-50 |
| MsG0180000300.01 | MsG0480021900.01 | 0.853689 | 2.024145e-61 | 4.410239e-58 |
| MsG0180000300.01 | MsG0480021914.01 | 0.821588 | 3.728263e-53 | 3.045706e-50 |
| MsG0180000300.01 | MsG0480022094.01 | 0.828471 | 8.825296e-55 | 8.780523e-52 |
| MsG0180000300.01 | MsG0480022115.01 | 0.801370 | 9.298743e-49 | 4.433180e-46 |
| MsG0180000300.01 | MsG0480022228.01 | 0.815945 | 7.125337e-52 | 4.981161e-49 |
| MsG0180000300.01 | MsG0480022318.01 | 0.849627 | 2.863736e-60 | 5.462471e-57 |
| MsG0180000300.01 | MsG0480022408.01 | 0.811207 | 7.856037e-51 | 4.833459e-48 |
| MsG0180000300.01 | MsG0480022479.01 | 0.857836 | 1.243885e-62 | 3.111315e-59 |
| MsG0180000300.01 | MsG0480022480.01 | 0.833195 | 6.130978e-56 | 7.009566e-53 |
| MsG0180000300.01 | MsG0480022552.01 | 0.808376 | 3.192992e-50 | 1.822759e-47 |
| MsG0180000300.01 | MsG0480022597.01 | 0.860766 | 1.643140e-63 | 4.542283e-60 |
| MsG0180000300.01 | MsG0480022598.01 | 0.868247 | 7.524450e-66 | 2.703162e-62 |
| MsG0180000300.01 | MsG0480022717.01 | 0.817361 | 3.431696e-52 | 2.493863e-49 |
| MsG0180000300.01 | MsG0480022719.01 | 0.845127 | 4.928973e-59 | 8.131813e-56 |
| MsG0180000300.01 | MsG0480023245.01 | 0.819838 | 9.409316e-53 | 7.322327e-50 |
| MsG0180000300.01 | MsG0480023258.01 | 0.806758 | 7.041919e-50 | 3.853483e-47 |
| MsG0180000300.01 | MsG0480023412.01 | 0.822209 | 2.677604e-53 | 2.226528e-50 |
| MsG0180000300.01 | MsG0480023421.01 | 0.841720 | 4.004171e-58 | 5.934907e-55 |
| MsG0180000300.01 | MsG0480023450.01 | 0.819965 | 8.801392e-53 | 6.873569e-50 |
| MsG0180000300.01 | MsG0480023460.01 | 0.857995 | 1.116002e-62 | 2.806373e-59 |
| MsG0180000300.01 | MsG0480023500.01 | 0.862469 | 4.959250e-64 | 1.454007e-60 |
| MsG0180000300.01 | MsG0480023581.01 | 0.829689 | 4.473549e-55 | 4.612526e-52 |
| MsG0180000300.01 | MsG0480023620.01 | 0.808476 | 3.040317e-50 | 1.740147e-47 |
| MsG0180000300.01 | MsG0480023718.01 | 0.838902 | 2.182549e-57 | 2.964703e-54 |
| MsG0180000300.01 | MsG0480023873.01 | 0.801758 | 7.742383e-49 | 3.727300e-46 |
| MsG0180000300.01 | MsG0480023874.01 | 0.805835 | 1.102064e-49 | 5.890334e-47 |
| MsG0180000300.01 | MsG0480024010.01 | 0.810983 | 8.786062e-51 | 5.374391e-48 |
| MsG0180000300.01 | MsG0580024035.01 | 0.815131 | 1.081958e-51 | 7.396605e-49 |
| MsG0180000300.01 | MsG0580024157.01 | 0.849831 | 2.511567e-60 | 4.822575e-57 |
| MsG0180000300.01 | MsG0580024205.01 | 0.840340 | 9.224135e-58 | 1.309810e-54 |
| MsG0180000300.01 | MsG0580024374.01 | 0.827240 | 1.744798e-54 | 1.674835e-51 |
| MsG0180000300.01 | MsG0580024489.01 | 0.808307 | 3.303066e-50 | 1.882139e-47 |
| MsG0180000300.01 | MsG0580024563.01 | 0.813287 | 2.763086e-51 | 1.796951e-48 |
| MsG0180000300.01 | MsG0580024618.01 | 0.829536 | 4.872121e-55 | 5.000599e-52 |
| MsG0180000300.01 | MsG0580024682.01 | 0.855636 | 5.523369e-62 | 1.283582e-58 |
| MsG0180000300.01 | MsG0580024721.01 | 0.813064 | 3.092555e-51 | 1.999047e-48 |
| MsG0180000300.01 | MsG0580024733.01 | 0.835961 | 1.237133e-56 | 1.536669e-53 |
| MsG0180000300.01 | MsG0580024770.01 | 0.809633 | 1.718168e-50 | 1.014112e-47 |
| MsG0180000300.01 | MsG0580024960.01 | 0.826420 | 2.739118e-54 | 2.567577e-51 |
| MsG0180000300.01 | MsG0580025184.01 | 0.802294 | 6.005960e-49 | 2.931342e-46 |
| MsG0180000300.01 | MsG0580025352.01 | 0.839441 | 1.582027e-57 | 2.184975e-54 |
| MsG0180000300.01 | MsG0580025555.01 | 0.801149 | 1.031610e-48 | 4.890996e-46 |
| MsG0180000300.01 | MsG0580025614.01 | 0.823648 | 1.236889e-53 | 1.071430e-50 |
| MsG0180000300.01 | MsG0580025907.01 | 0.816934 | 4.280508e-52 | 3.074733e-49 |
| MsG0180000300.01 | MsG0580027208.01 | 0.815213 | 1.037177e-51 | 7.106362e-49 |
| MsG0180000300.01 | MsG0580027954.01 | 0.801233 | 9.919950e-49 | 4.712983e-46 |
| MsG0180000300.01 | MsG0580028307.01 | 0.807764 | 4.309849e-50 | 2.420931e-47 |
| MsG0180000300.01 | MsG0580029148.01 | 0.813957 | 1.967417e-51 | 1.302987e-48 |
| MsG0180000300.01 | MsG0580029149.01 | 0.845191 | 4.736317e-59 | 7.830386e-56 |
| MsG0180000300.01 | MsG0580029541.01 | 0.803479 | 3.417820e-49 | 1.719385e-46 |
| MsG0180000300.01 | MsG0580030235.01 | 0.825738 | 3.980140e-54 | 3.658995e-51 |
| MsG0180000300.01 | MsG0580030252.01 | 0.811207 | 7.856037e-51 | 4.833459e-48 |
| MsG0180000300.01 | MsG0680030321.01 | 0.840825 | 6.886366e-58 | 9.928005e-55 |
| MsG0180000300.01 | MsG0680030436.01 | 0.845686 | 3.478100e-59 | 5.843240e-56 |
| MsG0180000300.01 | MsG0680030684.01 | 0.844884 | 5.733068e-59 | 9.386110e-56 |
| MsG0180000300.01 | MsG0680030685.01 | 0.824589 | 7.436737e-54 | 6.616644e-51 |
| MsG0180000300.01 | MsG0680030740.01 | 0.811044 | 8.523564e-51 | 5.221809e-48 |
| MsG0180000300.01 | MsG0680031508.01 | 0.807066 | 6.059564e-50 | 3.342555e-47 |
| MsG0180000300.01 | MsG0680034392.01 | 0.817322 | 3.501844e-52 | 2.542066e-49 |
| MsG0180000300.01 | MsG0680034757.01 | 0.817783 | 2.756816e-52 | 2.026782e-49 |
| MsG0180000300.01 | MsG0680035656.01 | 0.820967 | 5.184531e-53 | 4.163397e-50 |
| MsG0180000300.01 | MsG0680035681.01 | 0.825684 | 4.099617e-54 | 3.763076e-51 |
| MsG0180000300.01 | MsG0680035737.01 | 0.827752 | 1.315433e-54 | 1.281501e-51 |
| MsG0180000300.01 | MsG0780036235.01 | 0.813000 | 3.193138e-51 | 2.060636e-48 |
| MsG0180000300.01 | MsG0780036773.01 | 0.827195 | 1.788972e-54 | 1.714954e-51 |
| MsG0180000300.01 | MsG0780036836.01 | 0.805054 | 1.606652e-49 | 8.416565e-47 |
| MsG0180000300.01 | MsG0780037975.01 | 0.863855 | 1.847398e-64 | 5.682447e-61 |
| MsG0180000300.01 | MsG0780038602.01 | 0.822027 | 2.949817e-53 | 2.440099e-50 |
| MsG0180000300.01 | MsG0780038630.01 | 0.816360 | 5.757250e-52 | 4.070818e-49 |
| MsG0180000300.01 | MsG0780038649.01 | 0.811775 | 5.912859e-51 | 3.692827e-48 |
| MsG0180000300.01 | MsG0780038837.01 | 0.839465 | 1.559314e-57 | 2.155172e-54 |
| MsG0180000300.01 | MsG0780039389.01 | 0.820192 | 7.808622e-53 | 6.136963e-50 |
| MsG0180000300.01 | MsG0780039654.01 | 0.865609 | 5.216337e-65 | 1.707725e-61 |
| MsG0180000300.01 | MsG0780039655.01 | 0.853196 | 2.802832e-61 | 6.007183e-58 |
| MsG0180000300.01 | MsG0780039712.01 | 0.856161 | 3.878355e-62 | 9.170922e-59 |
| MsG0180000300.01 | MsG0780039845.01 | 0.815493 | 8.986123e-52 | 6.205201e-49 |
| MsG0180000300.01 | MsG0780039858.01 | 0.804935 | 1.700899e-49 | 8.883695e-47 |
| MsG0180000300.01 | MsG0780040488.01 | 0.875660 | 2.586075e-68 | 1.217603e-64 |
| MsG0180000300.01 | MsG0780040505.01 | 0.809061 | 2.278875e-50 | 1.324589e-47 |
| MsG0180000300.01 | MsG0780040601.01 | 0.810357 | 1.199841e-50 | 7.216967e-48 |
| MsG0180000300.01 | MsG0780040687.01 | 0.817972 | 2.498621e-52 | 1.846387e-49 |
| MsG0180000300.01 | MsG0780040897.01 | 0.827854 | 1.243212e-54 | 1.214852e-51 |
| MsG0180000300.01 | MsG0780041033.01 | 0.835011 | 2.150480e-56 | 2.596207e-53 |
| MsG0180000300.01 | MsG0780041245.01 | 0.841165 | 5.606816e-58 | 8.168273e-55 |
| MsG0180000300.01 | MsG0780041310.01 | 0.870640 | 1.252633e-66 | 4.907615e-63 |
| MsG0180000300.01 | MsG0780041370.01 | 0.816843 | 4.485899e-52 | 3.214154e-49 |
| MsG0180000300.01 | MsG0780041371.01 | 0.828771 | 7.467853e-55 | 7.494427e-52 |
| MsG0180000300.01 | MsG0780041376.01 | 0.801126 | 1.042865e-48 | 4.941509e-46 |
| MsG0180000300.01 | MsG0780041469.01 | 0.850538 | 1.591992e-60 | 3.128401e-57 |
| MsG0180000300.01 | MsG0780041667.01 | 0.816901 | 4.353582e-52 | 3.124225e-49 |
| MsG0180000300.01 | MsG0780041787.01 | 0.833063 | 6.613725e-56 | 7.532042e-53 |
| MsG0180000300.01 | MsG0880041860.01 | 0.804270 | 2.341715e-49 | 1.202153e-46 |
| MsG0180000300.01 | MsG0880042329.01 | 0.813623 | 2.330617e-51 | 1.529674e-48 |
| MsG0180000300.01 | MsG0880042547.01 | 0.811887 | 5.591801e-51 | 3.502530e-48 |
| MsG0180000300.01 | MsG0880042552.01 | 0.815139 | 1.077092e-51 | 7.364927e-49 |
| MsG0180000300.01 | MsG0880042783.01 | 0.809841 | 1.550192e-50 | 9.199513e-48 |
| MsG0180000300.01 | MsG0880042837.01 | 0.803666 | 3.126726e-49 | 1.580411e-46 |
| MsG0180000300.01 | MsG0880043116.01 | 0.800667 | 1.294327e-48 | 6.061916e-46 |
| MsG0180000300.01 | MsG0880043516.01 | 0.822976 | 1.775975e-53 | 1.509362e-50 |
| MsG0180000300.01 | MsG0880043522.01 | 0.849078 | 4.072767e-60 | 7.631969e-57 |
| MsG0180000300.01 | MsG0880043533.01 | 0.811354 | 7.303023e-51 | 4.510277e-48 |
| MsG0180000300.01 | MsG0880043547.01 | 0.852196 | 5.409206e-61 | 1.121673e-57 |
| MsG0180000300.01 | MsG0880043921.01 | 0.857623 | 1.438417e-62 | 3.572644e-59 |
| MsG0180000300.01 | MsG0880044732.01 | 0.823953 | 1.049206e-53 | 9.166870e-51 |
| MsG0180000300.01 | MsG0880044917.01 | 0.854035 | 1.608836e-61 | 3.546320e-58 |
| MsG0180000300.01 | MsG0880045429.01 | 0.824650 | 7.196862e-54 | 6.414328e-51 |
| MsG0180000300.01 | MsG0880045687.01 | 0.802976 | 4.345369e-49 | 2.157808e-46 |
| MsG0180000300.01 | MsG0880045786.01 | 0.809705 | 1.658200e-50 | 9.805104e-48 |
| MsG0180000300.01 | MsG0880045914.01 | 0.807777 | 4.283367e-50 | 2.406865e-47 |
| MsG0180000300.01 | MsG0880045936.01 | 0.808234 | 3.423638e-50 | 1.947113e-47 |
| MsG0180000300.01 | MsG0880046165.01 | 0.825555 | 4.397882e-54 | 4.021858e-51 |
| MsG0180000300.01 | MsG0880046643.01 | 0.804037 | 2.617630e-49 | 1.335862e-46 |
| MsG0180000300.01 | MsG0880046718.01 | 0.829205 | 5.862884e-55 | 5.960374e-52 |
| MsG0180000300.01 | MsG0880046762.01 | 0.841660 | 4.153334e-58 | 6.144672e-55 |
| MsG0180000300.01 | MsG0880047044.01 | 0.824009 | 1.018265e-53 | 8.909274e-51 |
| MsG0180000300.01 | MsG0880047226.01 | 0.824371 | 8.367590e-54 | 7.397302e-51 |
| MsG0180000300.01 | MsG0880047293.01 | 0.859382 | 4.300481e-63 | 1.133696e-59 |
| MsG0180000300.01 | MsG0880047337.01 | 0.805846 | 1.095901e-49 | 5.859207e-47 |
| MsG0180000300.01 | MsG0880047437.01 | 0.809739 | 1.630520e-50 | 9.650506e-48 |
| MsG0180000300.01 | MsG0880047497.01 | 0.834227 | 3.385034e-56 | 3.991506e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000300.01.T01 | MTR_1g018680 | 74.219 | 128 | 5 | 1 | 103 | 230 | 182 | 281 | 1.22e-53 | 176 |
| MsG0180000300.01.T01 | MTR_3g102520 | 55.469 | 128 | 29 | 4 | 103 | 230 | 182 | 281 | 4.10e-34 | 125 |
| MsG0180000300.01.T01 | MTR_3g102530 | 47.761 | 134 | 40 | 3 | 103 | 234 | 175 | 280 | 5.22e-33 | 122 |
| MsG0180000300.01.T01 | MTR_3g102560 | 51.562 | 128 | 29 | 2 | 103 | 230 | 155 | 249 | 1.06e-32 | 121 |
| MsG0180000300.01.T01 | MTR_3g102510 | 48.438 | 128 | 38 | 2 | 103 | 230 | 163 | 262 | 6.58e-32 | 119 |
| MsG0180000300.01.T01 | MTR_3g102540 | 46.875 | 128 | 35 | 2 | 103 | 230 | 100 | 194 | 1.43e-27 | 106 |
| MsG0180000300.01.T01 | MTR_3g088405 | 42.763 | 152 | 56 | 5 | 82 | 230 | 308 | 431 | 6.48e-26 | 105 |
| MsG0180000300.01.T01 | MTR_2g102520 | 41.667 | 132 | 41 | 2 | 103 | 230 | 304 | 403 | 7.95e-25 | 102 |
| MsG0180000300.01.T01 | MTR_3g088415 | 45.312 | 128 | 42 | 3 | 103 | 230 | 329 | 428 | 1.06e-24 | 101 |
| MsG0180000300.01.T01 | MTR_3g088415 | 45.312 | 128 | 42 | 3 | 103 | 230 | 329 | 428 | 1.79e-24 | 101 |
| MsG0180000300.01.T01 | MTR_2g102550 | 40.625 | 128 | 48 | 2 | 103 | 230 | 256 | 355 | 1.28e-23 | 98.2 |
| MsG0180000300.01.T01 | MTR_1g011470 | 44.531 | 128 | 43 | 3 | 103 | 230 | 250 | 349 | 1.45e-23 | 98.2 |
| MsG0180000300.01.T01 | MTR_3g107970 | 44.531 | 128 | 43 | 3 | 103 | 230 | 302 | 401 | 1.94e-23 | 98.2 |
| MsG0180000300.01.T01 | MTR_3g088415 | 60.000 | 65 | 22 | 2 | 103 | 167 | 329 | 389 | 2.18e-16 | 77.8 |
| MsG0180000300.01.T01 | MTR_7g089080 | 35.433 | 127 | 55 | 3 | 103 | 229 | 286 | 385 | 9.41e-15 | 73.6 |
| MsG0180000300.01.T01 | MTR_5g088980 | 36.719 | 128 | 48 | 4 | 103 | 229 | 252 | 347 | 2.00e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000300.01.T01 | AT1G47230 | 56.061 | 132 | 30 | 4 | 99 | 230 | 183 | 286 | 1.05e-37 | 135 |
| MsG0180000300.01.T01 | AT1G47230 | 57.031 | 128 | 27 | 4 | 103 | 230 | 186 | 285 | 1.15e-37 | 135 |
| MsG0180000300.01.T01 | AT5G43080 | 57.031 | 128 | 27 | 4 | 103 | 230 | 176 | 275 | 4.22e-36 | 130 |
| MsG0180000300.01.T01 | AT5G43080 | 54.688 | 128 | 25 | 4 | 103 | 230 | 176 | 270 | 2.26e-33 | 123 |
| MsG0180000300.01.T01 | AT1G47210 | 52.344 | 128 | 33 | 4 | 103 | 230 | 193 | 292 | 6.69e-32 | 120 |
| MsG0180000300.01.T01 | AT1G47220 | 53.125 | 128 | 32 | 4 | 103 | 230 | 147 | 246 | 2.01e-30 | 115 |
| MsG0180000300.01.T01 | AT1G44110 | 45.312 | 128 | 42 | 3 | 103 | 230 | 283 | 382 | 1.74e-25 | 103 |
| MsG0180000300.01.T01 | AT1G15570 | 43.182 | 132 | 39 | 2 | 103 | 230 | 277 | 376 | 3.78e-25 | 102 |
| MsG0180000300.01.T01 | AT1G80370 | 43.750 | 128 | 44 | 3 | 103 | 230 | 286 | 385 | 9.96e-25 | 101 |
| MsG0180000300.01.T01 | AT5G25380 | 42.969 | 128 | 45 | 3 | 103 | 230 | 262 | 361 | 2.09e-24 | 100 |
| MsG0180000300.01.T01 | AT5G25380 | 42.969 | 128 | 45 | 3 | 103 | 230 | 262 | 361 | 2.21e-24 | 100 |
| MsG0180000300.01.T01 | AT5G25380 | 42.969 | 128 | 45 | 3 | 103 | 230 | 262 | 361 | 2.21e-24 | 100 |
| MsG0180000300.01.T01 | AT5G25380 | 42.969 | 128 | 45 | 3 | 103 | 230 | 268 | 367 | 2.81e-24 | 100 |
| MsG0180000300.01.T01 | AT1G77390 | 44.531 | 128 | 43 | 2 | 103 | 230 | 267 | 366 | 3.64e-22 | 94.4 |
| MsG0180000300.01.T01 | AT5G11300 | 42.188 | 128 | 46 | 3 | 103 | 230 | 261 | 360 | 4.64e-22 | 94.0 |
| MsG0180000300.01.T01 | AT5G11300 | 42.188 | 128 | 46 | 3 | 103 | 230 | 261 | 360 | 1.09e-21 | 92.8 |
Find 44 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAAGTTCTTGCCTTCTA+TGG | 0.257368 | 1:-4158831 | MsG0180000300.01.T01:CDS |
| CGCGTGGGGTTAACGCTCTT+TGG | 0.262421 | 1:+4160904 | None:intergenic |
| CCGTTTATGTGTGCCAAATC+TGG | 0.280673 | 1:-4158962 | MsG0180000300.01.T01:CDS |
| CTTAGGAATGTCTTTATTGT+AGG | 0.290255 | 1:+4159735 | None:intergenic |
| GTCAGGAATTACTGGTATAT+TGG | 0.291075 | 1:-4160079 | MsG0180000300.01.T01:intron |
| CCTTGCTGAGCTCAGTTTGT+TGG | 0.292382 | 1:-4158864 | MsG0180000300.01.T01:CDS |
| ATGAAAATGTCAGGAATTAC+TGG | 0.319629 | 1:-4160087 | MsG0180000300.01.T01:intron |
| GAAGTCATTGAAGTTTGAAT+TGG | 0.360491 | 1:-4159763 | MsG0180000300.01.T01:CDS |
| CAAACCAAAGTCTCCAGATT+TGG | 0.361733 | 1:+4158949 | None:intergenic |
| TTGGCACACATAAACGGAAA+TGG | 0.390434 | 1:+4158968 | None:intergenic |
| ACTGATGCAGCCACCATAGA+AGG | 0.402548 | 1:+4158818 | None:intergenic |
| TGGCACACATAAACGGAAAT+GGG | 0.428878 | 1:+4158969 | None:intergenic |
| TCACGTTGAGGGCGGCGCGT+GGG | 0.441478 | 1:+4160889 | None:intergenic |
| CCAGATTTGGCACACATAAA+CGG | 0.441557 | 1:+4158962 | None:intergenic |
| TACAAGATTCACCTCTTCCT+TGG | 0.443619 | 1:+4159904 | None:intergenic |
| CTCCGGTACCGGAGTTTCAT+CGG | 0.457156 | 1:+4160714 | None:intergenic |
| CAATAAAACACACATGCCTT+AGG | 0.458728 | 1:+4159718 | None:intergenic |
| AGAAGATTCATCACTAAAGT+TGG | 0.459150 | 1:-4159619 | MsG0180000300.01.T01:CDS |
| AAGTCATTGAAGTTTGAATT+GGG | 0.468127 | 1:-4159762 | MsG0180000300.01.T01:CDS |
| CACGTTGAGGGCGGCGCGTG+GGG | 0.493799 | 1:+4160890 | None:intergenic |
| GATTAAGCCACCTGAGGTTG+AGG | 0.495688 | 1:-4159957 | MsG0180000300.01.T01:CDS |
| TGTGCCAAATCTGGAGACTT+TGG | 0.506286 | 1:-4158953 | MsG0180000300.01.T01:CDS |
| TTGTTCACATAGTGCAGCTA+CGG | 0.511501 | 1:+4160852 | None:intergenic |
| TTCACGTTGAGGGCGGCGCG+TGG | 0.513771 | 1:+4160888 | None:intergenic |
| CTTCAAAATATCAGCCTCCA+TGG | 0.525850 | 1:+4159782 | None:intergenic |
| ATCACTAAAGTTGGTCTAGA+GGG | 0.532834 | 1:-4159610 | MsG0180000300.01.T01:CDS |
| TAACAAAAGTCCTCAACCTC+AGG | 0.540151 | 1:+4159947 | None:intergenic |
| GAAGTTCTTGCCTTCTATGG+TGG | 0.548750 | 1:-4158828 | MsG0180000300.01.T01:CDS |
| ATCAAACTCCGATGAAACTC+CGG | 0.553690 | 1:-4160722 | MsG0180000300.01.T01:intron |
| ATTATATACAGAAAGTTCAA+AGG | 0.558828 | 1:-4160477 | MsG0180000300.01.T01:CDS |
| TTATATACAGAAAGTTCAAA+GGG | 0.568073 | 1:-4160476 | MsG0180000300.01.T01:CDS |
| CAATACATACTCCAAGGAAG+AGG | 0.589667 | 1:-4159915 | MsG0180000300.01.T01:intron |
| AAACGAAAACGTGTTCCTCT+CGG | 0.594016 | 1:-4160823 | MsG0180000300.01.T01:CDS |
| CATCACTAAAGTTGGTCTAG+AGG | 0.599941 | 1:-4159611 | MsG0180000300.01.T01:CDS |
| GCTCAGCAAGGTAAGAGCAA+AGG | 0.603798 | 1:+4158876 | None:intergenic |
| CTACAATAAAGACATTCCTA+AGG | 0.613211 | 1:-4159734 | MsG0180000300.01.T01:CDS |
| CAAAAGTCCTCAACCTCAGG+TGG | 0.618973 | 1:+4159950 | None:intergenic |
| TCATTGAAGTTTGAATTGGG+TGG | 0.631240 | 1:-4159759 | MsG0180000300.01.T01:CDS |
| TCTTTGCTTCACGTTGAGGG+CGG | 0.632157 | 1:+4160881 | None:intergenic |
| TACGGACAATACATACTCCA+AGG | 0.633308 | 1:-4159921 | MsG0180000300.01.T01:CDS |
| CCAACAAACTGAGCTCAGCA+AGG | 0.668066 | 1:+4158864 | None:intergenic |
| TCGTTTGTTATTTCACCGAG+AGG | 0.670866 | 1:+4160808 | None:intergenic |
| TTCTGTATATAATCACACAA+TGG | 0.674639 | 1:+4160487 | None:intergenic |
| TGAAGAGATTAAGCCACCTG+AGG | 0.697941 | 1:-4159963 | MsG0180000300.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTGATTTTTTTATTTT+TGG | - | Chr1:4159705-4159724 | MsG0180000300.01.T01:intron | 10.0% |
| !! | TATTCTTAAAAAAGTTAGTA+AGG | + | Chr1:4160516-4160535 | None:intergenic | 15.0% |
| !!! | TTTAACTTCAAATTTCAATT+AGG | - | Chr1:4159106-4159125 | MsG0180000300.01.T01:intron | 15.0% |
| !!! | TTTTTGTTTTTGTTGTTTTT+AGG | - | Chr1:4159177-4159196 | MsG0180000300.01.T01:intron | 15.0% |
| !! | AATTAAAATAACACTCACAT+TGG | - | Chr1:4159519-4159538 | MsG0180000300.01.T01:intron | 20.0% |
| !! | ATTATATACAGAAAGTTCAA+AGG | - | Chr1:4159226-4159245 | MsG0180000300.01.T01:intron | 20.0% |
| !! | CACATTTGACAAAAAATTTA+GGG | + | Chr1:4160576-4160595 | None:intergenic | 20.0% |
| !! | TAAACAATAAAATCACATCT+TGG | + | Chr1:4159672-4159691 | None:intergenic | 20.0% |
| !! | TGATGAATAAATACCTAATT+TGG | - | Chr1:4159472-4159491 | MsG0180000300.01.T01:intron | 20.0% |
| !! | TTATATACAGAAAGTTCAAA+GGG | - | Chr1:4159227-4159246 | MsG0180000300.01.T01:intron | 20.0% |
| !! | TTTGGTATTTGTTTGATTAA+AGG | - | Chr1:4159892-4159911 | MsG0180000300.01.T01:intron | 20.0% |
| !!! | AAATAGTATCATCTAAGATA+GGG | - | Chr1:4160286-4160305 | MsG0180000300.01.T01:intron | 20.0% |
| !!! | AGTTTGAAATCAATTTTACT+TGG | - | Chr1:4160677-4160696 | MsG0180000300.01.T01:intron | 20.0% |
| !!! | ATGTGAGTGTTATTTTAATT+TGG | + | Chr1:4159519-4159538 | None:intergenic | 20.0% |
| !!! | TAAAATTGATTTCAAACTTC+TGG | + | Chr1:4160675-4160694 | None:intergenic | 20.0% |
| !!! | TGTGAGTGTTATTTTAATTT+GGG | + | Chr1:4159518-4159537 | None:intergenic | 20.0% |
| !!! | TTCAAATTTCAATTAGGTTT+TGG | - | Chr1:4159112-4159131 | MsG0180000300.01.T01:intron | 20.0% |
| ! | AAATGGGTCAAAATTAATAG+AGG | + | Chr1:4159579-4159598 | None:intergenic | 25.0% |
| ! | AAGAGTAATCTCTGTTAAAA+TGG | + | Chr1:4159596-4159615 | None:intergenic | 25.0% |
| ! | AAGTCATTGAAGTTTGAATT+GGG | - | Chr1:4159941-4159960 | MsG0180000300.01.T01:CDS | 25.0% |
| ! | AGAGTAATCTCTGTTAAAAT+GGG | + | Chr1:4159595-4159614 | None:intergenic | 25.0% |
| ! | ATGTTTCTTTGTATGTTGAA+TGG | - | Chr1:4160011-4160030 | MsG0180000300.01.T01:intron | 25.0% |
| ! | ATTACTCTTATGAAAATGTC+AGG | - | Chr1:4159607-4159626 | MsG0180000300.01.T01:CDS | 25.0% |
| ! | CCACATTTGACAAAAAATTT+AGG | + | Chr1:4160577-4160596 | None:intergenic | 25.0% |
| ! | TAATAGAAAGAGAATTAGAG+TGG | - | Chr1:4160342-4160361 | MsG0180000300.01.T01:intron | 25.0% |
| ! | TTCTGTATATAATCACACAA+TGG | + | Chr1:4159219-4159238 | None:intergenic | 25.0% |
| ! | TTTATTACTCAAAATGTTGC+AGG | - | Chr1:4160707-4160726 | MsG0180000300.01.T01:intron | 25.0% |
| ! | TTTCGGTTTCTTATATTGAT+CGG | - | Chr1:4159335-4159354 | MsG0180000300.01.T01:intron | 25.0% |
| !! | CAAATAGTATCATCTAAGAT+AGG | - | Chr1:4160285-4160304 | MsG0180000300.01.T01:intron | 25.0% |
| !!! | CCTAAATTTTTTGTCAAATG+TGG | - | Chr1:4160574-4160593 | MsG0180000300.01.T01:intron | 25.0% |
| !!! | TTTCACAAAGAAAGTATCTT+TGG | - | Chr1:4160617-4160636 | MsG0180000300.01.T01:intron | 25.0% |
| AAAAAGTTAGTAAGGTTGCA+TGG | + | Chr1:4160508-4160527 | None:intergenic | 30.0% | |
| AAAAGTTAGTAAGGTTGCAT+GGG | + | Chr1:4160507-4160526 | None:intergenic | 30.0% | |
| AAACCGAAAATAAAGCGTAT+CGG | + | Chr1:4159324-4159343 | None:intergenic | 30.0% | |
| AACCTATAACTACTATGAGA+TGG | + | Chr1:4160148-4160167 | None:intergenic | 30.0% | |
| AATTTGGGTGCAAACAAATT+GGG | + | Chr1:4159503-4159522 | None:intergenic | 30.0% | |
| ACATAAGTTTCACATAACTG+AGG | + | Chr1:4159035-4159054 | None:intergenic | 30.0% | |
| ACCTATAACTACTATGAGAT+GGG | + | Chr1:4160147-4160166 | None:intergenic | 30.0% | |
| AGAAGATTCATCACTAAAGT+TGG | - | Chr1:4160084-4160103 | MsG0180000300.01.T01:intron | 30.0% | |
| AGACAGAAGTTACAATTACT+CGG | - | Chr1:4159382-4159401 | MsG0180000300.01.T01:intron | 30.0% | |
| AGATACTTTCTTTGTGAAAG+TGG | + | Chr1:4160616-4160635 | None:intergenic | 30.0% | |
| AGTAGTTATAGGTTATGACA+TGG | - | Chr1:4160154-4160173 | MsG0180000300.01.T01:intron | 30.0% | |
| ATGAAAATGTCAGGAATTAC+TGG | - | Chr1:4159616-4159635 | MsG0180000300.01.T01:CDS | 30.0% | |
| ATTAGCAAAAAGCCCAAATT+AGG | + | Chr1:4159143-4159162 | None:intergenic | 30.0% | |
| CTACAATAAAGACATTCCTA+AGG | - | Chr1:4159969-4159988 | MsG0180000300.01.T01:CDS | 30.0% | |
| CTTAGGAATGTCTTTATTGT+AGG | + | Chr1:4159971-4159990 | None:intergenic | 30.0% | |
| GAAGTCATTGAAGTTTGAAT+TGG | - | Chr1:4159940-4159959 | MsG0180000300.01.T01:CDS | 30.0% | |
| TAATTTGGGTGCAAACAAAT+TGG | + | Chr1:4159504-4159523 | None:intergenic | 30.0% | |
| TATAGGTTATGACATGGATT+CGG | - | Chr1:4160160-4160179 | MsG0180000300.01.T01:intron | 30.0% | |
| TATTGAATGAACTATCCAGA+AGG | + | Chr1:4160436-4160455 | None:intergenic | 30.0% | |
| TGGACTATAAACAAATTGTG+AGG | - | Chr1:4159644-4159663 | MsG0180000300.01.T01:intron | 30.0% | |
| TTAGCAAAAAGCCCAAATTA+GGG | + | Chr1:4159142-4159161 | None:intergenic | 30.0% | |
| TTTACGATTATCTTCGTAAC+AGG | - | Chr1:4159063-4159082 | MsG0180000300.01.T01:intron | 30.0% | |
| TTTGTTGCATTCTATAATGG+TGG | - | Chr1:4159542-4159561 | MsG0180000300.01.T01:intron | 30.0% | |
| ! | ATAGTTGAACTTTGAGCTTT+TGG | - | Chr1:4160387-4160406 | MsG0180000300.01.T01:intron | 30.0% |
| ! | ATGTTCAACTTTTAGTAGTG+TGG | - | Chr1:4160198-4160217 | MsG0180000300.01.T01:intron | 30.0% |
| ! | GATTTTGGATGGTATTGTTT+TGG | - | Chr1:4159874-4159893 | MsG0180000300.01.T01:intron | 30.0% |
| ! | TACTTTTATCTCTTTTGTGC+AGG | - | Chr1:4160782-4160801 | MsG0180000300.01.T01:CDS | 30.0% |
| ! | TAGTTGAACTTTGAGCTTTT+GGG | - | Chr1:4160388-4160407 | MsG0180000300.01.T01:intron | 30.0% |
| ! | TGAGGACTTTTGTTACATTA+CGG | - | Chr1:4159764-4159783 | MsG0180000300.01.T01:CDS | 30.0% |
| ! | TGTGTTGTTGAATGTTTGTT+TGG | - | Chr1:4159837-4159856 | MsG0180000300.01.T01:intron | 30.0% |
| ! | TGTTCAACTTTTAGTAGTGT+GGG | - | Chr1:4160199-4160218 | MsG0180000300.01.T01:intron | 30.0% |
| ! | TTGGGCTTTTTGCTAATTTA+GGG | - | Chr1:4159146-4159165 | MsG0180000300.01.T01:intron | 30.0% |
| ! | TTTGGGCTTTTTGCTAATTT+AGG | - | Chr1:4159145-4159164 | MsG0180000300.01.T01:intron | 30.0% |
| !! | GTTGAATGTTTGTTTGGTTT+TGG | - | Chr1:4159843-4159862 | MsG0180000300.01.T01:intron | 30.0% |
| !! | TGGTTTGTTGCATTCTATAA+TGG | - | Chr1:4159539-4159558 | MsG0180000300.01.T01:intron | 30.0% |
| !! | TTGATTAAAGGTTTTGACCA+TGG | - | Chr1:4159904-4159923 | MsG0180000300.01.T01:intron | 30.0% |
| !!! | CTTTTGGTTACTTTTGCTAT+TGG | - | Chr1:4160223-4160242 | MsG0180000300.01.T01:intron | 30.0% |
| !!! | GTTTTGGTTTTCCCTAATTT+GGG | - | Chr1:4159128-4159147 | MsG0180000300.01.T01:intron | 30.0% |
| !!! | TTTCCGATACGCTTTATTTT+CGG | - | Chr1:4159318-4159337 | MsG0180000300.01.T01:intron | 30.0% |
| ACCCATCTCATAGTAGTTAT+AGG | - | Chr1:4160143-4160162 | MsG0180000300.01.T01:intron | 35.0% | |
| CAATAAAACACACATGCCTT+AGG | + | Chr1:4159988-4160007 | None:intergenic | 35.0% | |
| GTCAGGAATTACTGGTATAT+TGG | - | Chr1:4159624-4159643 | MsG0180000300.01.T01:intron | 35.0% | |
| TCATTGAAGTTTGAATTGGG+TGG | - | Chr1:4159944-4159963 | MsG0180000300.01.T01:CDS | 35.0% | |
| TTCGAATTTCTCCAATTCTC+CGG | + | Chr1:4159009-4159028 | None:intergenic | 35.0% | |
| ! | ATCACTAAAGTTGGTCTAGA+GGG | - | Chr1:4160093-4160112 | MsG0180000300.01.T01:intron | 35.0% |
| ! | GTTAGTCTGCAGAACAAAAT+AGG | + | Chr1:4160480-4160499 | None:intergenic | 35.0% |
| ! | TTTTAGTAGTGTGGGACTTT+TGG | - | Chr1:4160207-4160226 | MsG0180000300.01.T01:intron | 35.0% |
| ! | TTTTCTTTGCTTCACGTTGA+GGG | + | Chr1:4158828-4158847 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGCTTCACGTTG+AGG | + | Chr1:4158829-4158848 | None:intergenic | 35.0% |
| !! | ATTAAAGGTTTTGACCATGG+AGG | - | Chr1:4159907-4159926 | MsG0180000300.01.T01:intron | 35.0% |
| !! | GTATCTTTGGTTTGTGCTAT+AGG | - | Chr1:4160630-4160649 | MsG0180000300.01.T01:intron | 35.0% |
| !!! | AGTGGTTTTGTCATGTCATT+TGG | - | Chr1:4160360-4160379 | MsG0180000300.01.T01:intron | 35.0% |
| !!! | GGTTTTGGTTTTCCCTAATT+TGG | - | Chr1:4159127-4159146 | MsG0180000300.01.T01:intron | 35.0% |
| !!! | GTTTTGGATCTTGCTGATTT+TGG | - | Chr1:4159859-4159878 | MsG0180000300.01.T01:intron | 35.0% |
| AAACGAAAACGTGTTCCTCT+CGG | - | Chr1:4158880-4158899 | MsG0180000300.01.T01:CDS | 40.0% | |
| AAAGTGGCTACTAGCTAGAT+TGG | + | Chr1:4160600-4160619 | None:intergenic | 40.0% | |
| AAATTGGGAGGGACCAAATT+AGG | + | Chr1:4159488-4159507 | None:intergenic | 40.0% | |
| ACGATTATCTTCGTAACAGG+AGG | - | Chr1:4159066-4159085 | MsG0180000300.01.T01:intron | 40.0% | |
| ATCAAACTCCGATGAAACTC+CGG | - | Chr1:4158981-4159000 | MsG0180000300.01.T01:intron | 40.0% | |
| CAAACCAAAGTCTCCAGATT+TGG | + | Chr1:4160757-4160776 | None:intergenic | 40.0% | |
| CAATACATACTCCAAGGAAG+AGG | - | Chr1:4159788-4159807 | MsG0180000300.01.T01:CDS | 40.0% | |
| CCAGATTTGGCACACATAAA+CGG | + | Chr1:4160744-4160763 | None:intergenic | 40.0% | |
| CTTCAAAATATCAGCCTCCA+TGG | + | Chr1:4159924-4159943 | None:intergenic | 40.0% | |
| TAACAAAAGTCCTCAACCTC+AGG | + | Chr1:4159759-4159778 | None:intergenic | 40.0% | |
| TACAAGATTCACCTCTTCCT+TGG | + | Chr1:4159802-4159821 | None:intergenic | 40.0% | |
| TACGGACAATACATACTCCA+AGG | - | Chr1:4159782-4159801 | MsG0180000300.01.T01:CDS | 40.0% | |
| TGGCACACATAAACGGAAAT+GGG | + | Chr1:4160737-4160756 | None:intergenic | 40.0% | |
| TGTGAAGTTCTTGCCTTCTA+TGG | - | Chr1:4160872-4160891 | MsG0180000300.01.T01:CDS | 40.0% | |
| TTGGCACACATAAACGGAAA+TGG | + | Chr1:4160738-4160757 | None:intergenic | 40.0% | |
| TTGTTCACATAGTGCAGCTA+CGG | + | Chr1:4158854-4158873 | None:intergenic | 40.0% | |
| ! | CATCACTAAAGTTGGTCTAG+AGG | - | Chr1:4160092-4160111 | MsG0180000300.01.T01:intron | 40.0% |
| ! | TTGAACTTTGAGCTTTTGGG+AGG | - | Chr1:4160391-4160410 | MsG0180000300.01.T01:intron | 40.0% |
| !! | TCGTTTGTTATTTCACCGAG+AGG | + | Chr1:4158898-4158917 | None:intergenic | 40.0% |
| !! | TGAACTTTGAGCTTTTGGGA+GGG | - | Chr1:4160392-4160411 | MsG0180000300.01.T01:intron | 40.0% |
| !!! | ACGTTTCGTTTTTTCTGCGT+TGG | + | Chr1:4158952-4158971 | None:intergenic | 40.0% |
| !!! | TGGATCTTGCTGATTTTGGA+TGG | - | Chr1:4159863-4159882 | MsG0180000300.01.T01:intron | 40.0% |
| CCGTTTATGTGTGCCAAATC+TGG | - | Chr1:4160741-4160760 | MsG0180000300.01.T01:CDS | 45.0% | |
| GAAGTTCTTGCCTTCTATGG+TGG | - | Chr1:4160875-4160894 | MsG0180000300.01.T01:CDS | 45.0% | |
| GAGATGGGAATTGAACCTTC+TGG | - | Chr1:4160418-4160437 | MsG0180000300.01.T01:intron | 45.0% | |
| GATGTTAACGCGAGTATGAG+GGG | - | Chr1:4159249-4159268 | MsG0180000300.01.T01:intron | 45.0% | |
| GGATGTTAACGCGAGTATGA+GGG | - | Chr1:4159248-4159267 | MsG0180000300.01.T01:intron | 45.0% | |
| TGAAGAGATTAAGCCACCTG+AGG | - | Chr1:4159740-4159759 | MsG0180000300.01.T01:CDS | 45.0% | |
| TGGGTGCAAACAAATTGGGA+GGG | + | Chr1:4159499-4159518 | None:intergenic | 45.0% | |
| TGTGCCAAATCTGGAGACTT+TGG | - | Chr1:4160750-4160769 | MsG0180000300.01.T01:CDS | 45.0% | |
| TTGGGTGCAAACAAATTGGG+AGG | + | Chr1:4159500-4159519 | None:intergenic | 45.0% | |
| TTTCTCCAATTCTCCGGTAC+CGG | + | Chr1:4159003-4159022 | None:intergenic | 45.0% | |
| ACTGATGCAGCCACCATAGA+AGG | + | Chr1:4160888-4160907 | None:intergenic | 50.0% | |
| CAAAAGTCCTCAACCTCAGG+TGG | + | Chr1:4159756-4159775 | None:intergenic | 50.0% | |
| CCAACAAACTGAGCTCAGCA+AGG | + | Chr1:4160842-4160861 | None:intergenic | 50.0% | |
| CCTTGCTGAGCTCAGTTTGT+TGG | - | Chr1:4160839-4160858 | MsG0180000300.01.T01:CDS | 50.0% | |
| GAATACCTCTGCTGCATCTC+TGG | - | Chr1:4160531-4160550 | MsG0180000300.01.T01:intron | 50.0% | |
| GATTAAGCCACCTGAGGTTG+AGG | - | Chr1:4159746-4159765 | MsG0180000300.01.T01:CDS | 50.0% | |
| GCTCAGCAAGGTAAGAGCAA+AGG | + | Chr1:4160830-4160849 | None:intergenic | 50.0% | |
| GGGATGTTAACGCGAGTATG+AGG | - | Chr1:4159247-4159266 | MsG0180000300.01.T01:intron | 50.0% | |
| TCTTTGCTTCACGTTGAGGG+CGG | + | Chr1:4158825-4158844 | None:intergenic | 50.0% | |
| ! | AAACTCCGGTACCGGAGAAT+TGG | - | Chr1:4158995-4159014 | MsG0180000300.01.T01:intron | 50.0% |
| !! | ACTCGGTGTTGCTTCGATGT+TGG | - | Chr1:4159399-4159418 | MsG0180000300.01.T01:intron | 50.0% |
| !! | CTTTTGGGAGGGTCTGAGAT+GGG | - | Chr1:4160403-4160422 | MsG0180000300.01.T01:intron | 50.0% |
| !! | GAGTATGAGGGGTGTTCTTG+TGG | - | Chr1:4159260-4159279 | MsG0180000300.01.T01:intron | 50.0% |
| !! | GGGTGTTCTTGTGGATTGGT+TGG | - | Chr1:4159269-4159288 | MsG0180000300.01.T01:intron | 50.0% |
| !! | TGAGGGGTGTTCTTGTGGAT+TGG | - | Chr1:4159265-4159284 | MsG0180000300.01.T01:intron | 50.0% |
| CTCCGATGAAACTCCGGTAC+CGG | - | Chr1:4158987-4159006 | MsG0180000300.01.T01:intron | 55.0% | |
| TACCTCTGCTGCATCTCTGG+TGG | - | Chr1:4160534-4160553 | MsG0180000300.01.T01:intron | 55.0% | |
| ! | CTCCGGTACCGGAGTTTCAT+CGG | + | Chr1:4158992-4159011 | None:intergenic | 55.0% |
| !! | GCTTTTGGGAGGGTCTGAGA+TGG | - | Chr1:4160402-4160421 | MsG0180000300.01.T01:intron | 55.0% |
| CGCGTGGGGTTAACGCTCTT+TGG | + | Chr1:4158802-4158821 | None:intergenic | 60.0% | |
| TGCCACCAGAGATGCAGCAG+AGG | + | Chr1:4160539-4160558 | None:intergenic | 60.0% | |
| TCACGTTGAGGGCGGCGCGT+GGG | + | Chr1:4158817-4158836 | None:intergenic | 70.0% | |
| TTCACGTTGAGGGCGGCGCG+TGG | + | Chr1:4158818-4158837 | None:intergenic | 70.0% | |
| CACGTTGAGGGCGGCGCGTG+GGG | + | Chr1:4158816-4158835 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 4158793 | 4160932 | 4158793 | ID=MsG0180000300.01;Name=MsG0180000300.01 |
| Chr1 | mRNA | 4158793 | 4160932 | 4158793 | ID=MsG0180000300.01.T01;Parent=MsG0180000300.01;Name=MsG0180000300.01.T01;_AED=0.41;_eAED=0.46;_QI=0|0.16|0.28|1|1|1|7|0|234 |
| Chr1 | exon | 4160723 | 4160932 | 4160723 | ID=MsG0180000300.01.T01:exon:5658;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4160464 | 4160526 | 4160464 | ID=MsG0180000300.01.T01:exon:5659;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4160065 | 4160096 | 4160065 | ID=MsG0180000300.01.T01:exon:5660;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4159916 | 4159991 | 4159916 | ID=MsG0180000300.01.T01:exon:5661;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4159729 | 4159811 | 4159729 | ID=MsG0180000300.01.T01:exon:5662;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4159603 | 4159639 | 4159603 | ID=MsG0180000300.01.T01:exon:5663;Parent=MsG0180000300.01.T01 |
| Chr1 | exon | 4158793 | 4158996 | 4158793 | ID=MsG0180000300.01.T01:exon:5664;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4160723 | 4160932 | 4160723 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4160464 | 4160526 | 4160464 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4160065 | 4160096 | 4160065 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4159916 | 4159991 | 4159916 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4159729 | 4159811 | 4159729 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4159603 | 4159639 | 4159603 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Chr1 | CDS | 4158793 | 4158996 | 4158793 | ID=MsG0180000300.01.T01:cds;Parent=MsG0180000300.01.T01 |
| Gene Sequence |
| Protein sequence |
