AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019858.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019858.01.T01 MTR_0013s0230 91.403 221 19 0 25 245 542 762 7.44e-148 441
MsG0480019858.01.T01 MTR_4g005190 81.900 221 39 1 25 245 542 761 2.31e-132 400
MsG0480019858.01.T01 MTR_4g005270 75.336 223 54 1 25 247 542 763 1.82e-124 380
MsG0480019858.01.T01 MTR_7g034535 76.923 221 51 0 25 245 477 697 8.26e-123 374
MsG0480019858.01.T01 MTR_8g016975 75.113 221 54 1 25 245 542 761 1.31e-119 368
MsG0480019858.01.T01 MTR_8g016960 73.756 221 57 1 25 245 537 756 7.20e-117 360
MsG0480019858.01.T01 MTR_8g017020 72.851 221 59 1 25 245 508 727 4.01e-116 358
MsG0480019858.01.T01 MTR_8g016940 71.163 215 61 1 25 239 51 264 2.40e-114 338
MsG0480019858.01.T01 MTR_3g436160 74.771 218 54 1 25 242 481 697 3.04e-110 342
MsG0480019858.01.T01 MTR_6g035010 60.465 215 84 1 25 239 539 752 2.36e-92 296
MsG0480019858.01.T01 MTR_6g093180 59.535 215 86 1 25 239 539 752 1.51e-89 289
MsG0480019858.01.T01 MTR_5g008810 59.535 215 86 1 25 239 540 753 1.18e-86 281
MsG0480019858.01.T01 MTR_6g034985 58.605 215 88 1 25 239 539 752 2.59e-86 281
MsG0480019858.01.T01 MTR_7g062020 56.422 218 93 2 25 241 551 767 1.04e-81 269
MsG0480019858.01.T01 MTR_6g088140 57.078 219 91 3 25 241 524 741 1.55e-79 262
MsG0480019858.01.T01 MTR_6g093100 55.507 227 90 4 25 241 550 775 3.41e-77 257
MsG0480019858.01.T01 MTR_4g005190 76.562 128 30 0 25 152 542 669 2.81e-65 223
MsG0480019858.01.T01 MTR_1g057850 77.444 133 30 0 259 391 53 185 3.42e-61 210
MsG0480019858.01.T01 MTR_6g088140 53.846 130 59 1 25 153 524 653 2.92e-40 154
MsG0480019858.01.T01 MTR_1g052045 44.693 179 50 4 219 384 43 185 9.07e-31 120
MsG0480019858.01.T01 MTR_8g016570 74.603 63 16 0 179 241 28 90 5.56e-28 108
MsG0480019858.01.T01 MTR_6g053150 85.455 55 8 0 423 477 42 96 1.86e-20 91.3
MsG0480019858.01.T01 MTR_1g054790 66.129 62 21 0 343 404 18 79 1.80e-18 82.0
MsG0480019858.01.T01 MTR_5g073300 46.739 92 29 1 246 337 147 218 6.53e-16 77.4
MsG0480019858.01.T01 MTR_2g038570 53.448 58 27 0 267 324 40 97 2.18e-12 63.5
MsG0480019858.01.T01 MTR_6g039030 66.667 54 18 0 424 477 99 152 4.69e-11 62.4
MsG0480019858.01.T01 MTR_5g060700 66.038 53 17 1 425 477 2 53 5.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019858.01.T01 AT1G78955 70.183 218 64 1 25 242 368 584 1.33e-113 347
MsG0480019858.01.T01 AT1G78955 70.183 218 64 1 25 242 478 694 2.02e-112 347
MsG0480019858.01.T01 AT1G78955 70.183 218 64 1 25 242 543 759 7.26e-112 348
MsG0480019858.01.T01 AT1G78960 66.197 213 71 1 25 237 392 603 5.98e-100 312
MsG0480019858.01.T01 AT1G78960 66.197 213 71 1 25 237 543 754 1.65e-98 313
MsG0480019858.01.T01 AT1G78960 66.197 213 71 1 25 237 543 754 1.65e-98 313
MsG0480019858.01.T01 AT1G78960 66.197 213 71 1 25 237 543 754 1.65e-98 313
MsG0480019858.01.T01 AT1G78970 63.256 215 78 1 25 239 540 753 2.20e-97 310
MsG0480019858.01.T01 AT1G78970 63.256 215 78 1 25 239 540 753 2.20e-97 310
MsG0480019858.01.T01 AT1G78970 63.256 215 78 1 25 239 540 753 2.20e-97 310
MsG0480019858.01.T01 AT1G78950 67.431 218 70 1 25 242 543 759 2.96e-95 304
MsG0480019858.01.T01 AT1G78950 67.431 218 70 1 25 242 552 768 4.07e-95 304
MsG0480019858.01.T01 AT1G66960 62.441 213 79 1 25 237 552 763 4.94e-92 296
MsG0480019858.01.T01 AT1G66960 62.441 213 79 1 25 237 543 754 4.96e-92 296
MsG0480019858.01.T01 AT1G66960 62.441 213 79 1 25 237 543 754 4.96e-92 296
MsG0480019858.01.T01 AT1G66960 62.441 213 79 1 25 237 543 754 4.96e-92 296
MsG0480019858.01.T01 AT1G78955 68.478 184 57 1 25 208 478 660 2.87e-87 281
MsG0480019858.01.T01 AT2G07050 57.604 217 91 1 25 241 449 664 2.04e-85 276
MsG0480019858.01.T01 AT2G07050 57.604 217 91 1 25 241 540 755 5.76e-85 277
MsG0480019858.01.T01 AT5G48010 54.545 220 95 2 25 240 548 766 8.27e-80 263
MsG0480019858.01.T01 AT1G78500 55.046 218 97 1 25 242 549 765 1.04e-79 263
MsG0480019858.01.T01 AT1G78500 55.046 218 97 1 25 242 549 765 1.04e-79 263
MsG0480019858.01.T01 AT3G45130 56.132 212 92 1 26 237 541 751 4.93e-79 261
MsG0480019858.01.T01 AT3G45130 56.132 212 92 1 26 237 541 751 4.93e-79 261
MsG0480019858.01.T01 AT3G45130 56.132 212 92 1 26 237 541 751 4.93e-79 261
MsG0480019858.01.T01 AT3G45130 56.132 212 92 1 26 237 541 751 6.66e-79 261
MsG0480019858.01.T01 AT3G45130 56.132 212 92 1 26 237 541 751 6.66e-79 261
MsG0480019858.01.T01 AT3G29255 54.378 217 98 1 25 241 489 704 1.40e-78 259
MsG0480019858.01.T01 AT1G78960 64.835 182 63 1 25 206 543 723 3.47e-78 259
MsG0480019858.01.T01 AT4G15370 55.288 208 92 1 32 239 547 753 4.67e-78 259
MsG0480019858.01.T01 AT4G15370 55.288 208 92 1 32 239 550 756 4.87e-78 259
MsG0480019858.01.T01 AT5G36150 52.995 217 101 1 25 241 543 758 6.71e-78 258
MsG0480019858.01.T01 AT5G36150 52.995 217 101 1 25 241 543 758 6.71e-78 258
MsG0480019858.01.T01 AT4G15340 54.028 211 96 1 25 235 548 757 2.51e-74 249
MsG0480019858.01.T01 AT5G48010 54.717 212 89 3 33 240 550 758 4.74e-73 245
MsG0480019858.01.T01 AT5G42600 53.456 217 99 2 25 241 544 758 8.52e-73 244
MsG0480019858.01.T01 AT1G78955 65.116 129 45 0 25 153 478 606 1.04e-55 196

Find 82 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAACTGCATGGGCTCTTA+TGG 0.196849 4:-28578164 MsG0480019858.01.T01:CDS
GCCTTTGGCTTAGAGTTCTT+TGG 0.231516 4:+28574078 None:intergenic
TTCCAACAAGCTTGAGTATC+TGG 0.240224 4:-28574873 MsG0480019858.01.T01:CDS
TTTGTTTCACTTATAGTTCT+TGG 0.276227 4:-28578446 MsG0480019858.01.T01:CDS
GGTTCATGGTATGGAAGTTT+TGG 0.303870 4:-28578471 MsG0480019858.01.T01:CDS
GCCAATCTCCTTGTTCCAAC+TGG 0.316759 4:+28577899 None:intergenic
GCCTTAGAGCTGGAAGCTTC+AGG 0.318104 4:+28574117 None:intergenic
GAAGATTTAGATAGTGAATC+TGG 0.325297 4:-28574643 MsG0480019858.01.T01:intron
GCTTTAAAACTGATTTCATT+AGG 0.325829 4:+28574202 None:intergenic
CAAACTGCATGGGCTCTTAT+GGG 0.352709 4:-28578163 MsG0480019858.01.T01:CDS
TTTGATGACTTCCCTTTAGA+TGG 0.358409 4:+28574977 None:intergenic
ACCTGAAGCTTCCAGCTCTA+AGG 0.360632 4:-28574118 MsG0480019858.01.T01:CDS
TCAGAGTTTATCATTGCCTT+TGG 0.389621 4:+28574063 None:intergenic
TGCCAGATACTCAAGCTTGT+TGG 0.407059 4:+28574871 None:intergenic
TCTATTTCTCTACCATCTAA+AGG 0.414989 4:-28574989 MsG0480019858.01.T01:CDS
TATAGTTCTTGGTTCGCTCT+TGG 0.421043 4:-28578435 MsG0480019858.01.T01:CDS
ACAAGGAGATTGGCCTCAAC+AGG 0.422883 4:-28577890 MsG0480019858.01.T01:intron
CCCAGTTGGAACAAGGAGAT+TGG 0.428383 4:-28577900 MsG0480019858.01.T01:CDS
GTTCTGTGGGATTGAGTAGC+TGG 0.441922 4:+28578658 None:intergenic
ATAGATTTACTCTTCTTAGC+AGG 0.446195 4:+28575007 None:intergenic
GGGTTTAATTCATGCTGGCC+AGG 0.447516 4:-28578143 MsG0480019858.01.T01:intron
CTTGGTGGTTTAGCAGCTGC+TGG 0.454955 4:-28578417 MsG0480019858.01.T01:CDS
CAGGTATATGTACCTCTTGA+AGG 0.459540 4:-28578208 MsG0480019858.01.T01:CDS
CTTATGGGTTTAATTCATGC+TGG 0.464868 4:-28578148 MsG0480019858.01.T01:CDS
ATCTCGTTCTTCCTATGCCC+TGG 0.469913 4:+28578549 None:intergenic
TTGTTCAAGAATTTATATCC+AGG 0.475662 4:-28578567 MsG0480019858.01.T01:CDS
AGTATCTGGCAAGGAAGAAA+AGG 0.477770 4:-28574859 MsG0480019858.01.T01:CDS
TAGTGAATCTGGGTCTGAAA+AGG 0.481484 4:-28574632 MsG0480019858.01.T01:CDS
AAAACTGATGGTTCATGGTA+TGG 0.482611 4:-28578480 MsG0480019858.01.T01:CDS
CTATTTCTCTACCATCTAAA+GGG 0.486074 4:-28574988 MsG0480019858.01.T01:CDS
GCAGCACGATGGAGAGGAGT+AGG 0.495145 4:+28577940 None:intergenic
TTTGTACAACATTTGACTGT+TGG 0.505611 4:+28578182 None:intergenic
AAATGTAGCTATGAGGTTAG+TGG 0.512060 4:-28574590 MsG0480019858.01.T01:CDS
AGGAAGTTTCTAAGTAAGAG+AGG 0.527511 4:-28574839 MsG0480019858.01.T01:CDS
TCACAATACAAAGAAACGAC+GGG 0.530176 4:-28578344 MsG0480019858.01.T01:CDS
AGTTCTTGGTTCGCTCTTGG+TGG 0.530933 4:-28578432 MsG0480019858.01.T01:CDS
TGAAGATCCTACTGAGAAGA+TGG 0.532745 4:-28574903 MsG0480019858.01.T01:CDS
TGCTCAATAGCAGTAACCTT+AGG 0.532972 4:+28575112 None:intergenic
CTCAAGGAATCGAACTGCAT+TGG 0.534843 4:+28578512 None:intergenic
GGGTCTGAAAAGGAAGAAGC+TGG 0.535594 4:-28574622 MsG0480019858.01.T01:CDS
AGAATTTATATCCAGGGCAT+AGG 0.536992 4:-28578560 MsG0480019858.01.T01:CDS
TTAAATTAAACCGCAGAGGA+AGG 0.537213 4:+28577403 None:intergenic
ACCTTAGGTCTCCATCTAGC+AGG 0.540278 4:+28575127 None:intergenic
AGCAGGAGGTCATGAATGGT+TGG 0.541628 4:-28578750 None:intergenic
CATGAATATGTTGAGTGCAC+TGG 0.545573 4:-28578612 MsG0480019858.01.T01:CDS
TCTTCATCAGAGTCTCCATC+AGG 0.549225 4:+28574920 None:intergenic
AGATCTTGTTAGCTCTCTCA+AGG 0.554997 4:-28575059 MsG0480019858.01.T01:CDS
CCAATCTCCTTGTTCCAACT+GGG 0.559305 4:+28577900 None:intergenic
ATTAATCTTAGCCTTAGAGC+TGG 0.560404 4:+28574107 None:intergenic
TGTTCAAGAATTTATATCCA+GGG 0.561362 4:-28578566 MsG0480019858.01.T01:CDS
CAAATGTTGTACAAACTGCA+TGG 0.562204 4:-28578174 MsG0480019858.01.T01:CDS
ATTGCTCATAAATTCCCAGT+TGG 0.569140 4:-28577914 MsG0480019858.01.T01:CDS
TATGAAGAAGAGTCACCTGA+TGG 0.569308 4:-28574935 MsG0480019858.01.T01:CDS
AAGATTTAGATAGTGAATCT+GGG 0.576560 4:-28574642 MsG0480019858.01.T01:intron
GACTGTTGGCTTCCTTCAAG+AGG 0.579647 4:+28578196 None:intergenic
TATTTACCGCAGGAACTCAC+AGG 0.581361 4:-28577520 MsG0480019858.01.T01:intron
CAATGCAGTTCGATTCCTTG+AGG 0.588791 4:-28578511 MsG0480019858.01.T01:CDS
ATGAAGCAAATGTAGCTATG+AGG 0.591533 4:-28574597 MsG0480019858.01.T01:CDS
AGCATGTTGTGAATGCATCA+AGG 0.591962 4:-28574182 MsG0480019858.01.T01:CDS
AGCATAGCCATCTTCTCAGT+AGG 0.592649 4:+28574896 None:intergenic
CATGTCCTCGAAAAGTTCTG+TGG 0.596418 4:+28578644 None:intergenic
GCCTGCTAGATGGAGACCTA+AGG 0.602002 4:-28575128 MsG0480019858.01.T01:CDS
GCCAAAGAACTCTAAGCCAA+AGG 0.602334 4:-28574079 MsG0480019858.01.T01:CDS
TAAACCGCAGAGGAAGGCAG+TGG 0.603117 4:+28577409 None:intergenic
AAATGTTGTACAAACTGCAT+GGG 0.605205 4:-28578173 MsG0480019858.01.T01:CDS
GATTTGACATGAACCTGTTG+AGG 0.611285 4:+28577877 None:intergenic
AGATTTAAACACTTTAAGTG+TGG 0.611379 4:-28575083 MsG0480019858.01.T01:CDS
CAGCACGATGGAGAGGAGTA+GGG 0.615782 4:+28577941 None:intergenic
AAGGCAGTGGAACTTGTCTA+CGG 0.616555 4:+28577422 None:intergenic
AGTTCCACTGCCTTCCTCTG+CGG 0.617806 4:-28577413 MsG0480019858.01.T01:intron
ATAAATTCCCAGTTGGAACA+AGG 0.618038 4:-28577907 MsG0480019858.01.T01:CDS
TAAGTTAAATTAAACCGCAG+AGG 0.626703 4:+28577399 None:intergenic
ATGTCCTCGAAAAGTTCTGT+GGG 0.629517 4:+28578645 None:intergenic
CTCACAATACAAAGAAACGA+CGG 0.633911 4:-28578345 MsG0480019858.01.T01:CDS
CACAATACAAAGAAACGACG+GGG 0.647190 4:-28578343 MsG0480019858.01.T01:CDS
ACAAGCTTGAGTATCTGGCA+AGG 0.663895 4:-28574868 MsG0480019858.01.T01:CDS
AAGTTTCTAAGTAAGAGAGG+TGG 0.676877 4:-28574836 MsG0480019858.01.T01:CDS
TGTTGTGAATGCATCAAGGA+AGG 0.678893 4:-28574178 MsG0480019858.01.T01:CDS
AATGCATCAAGGAAGGCTGA+AGG 0.712541 4:-28574171 MsG0480019858.01.T01:CDS
ACAATACAAAGAAACGACGG+GGG 0.735334 4:-28578342 MsG0480019858.01.T01:CDS
CAATACAAAGAAACGACGGG+GGG 0.741756 4:-28578341 MsG0480019858.01.T01:CDS
TATTCAGCTAGAGCCCACAG+TGG 0.768555 4:+28577445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAAAAAAAAAAATT+GGG - Chr4:28575472-28575491 MsG0480019858.01.T01:intron 0.0%
!! AAAAAACATTATTCAATATA+TGG + Chr4:28575516-28575535 None:intergenic 10.0%
!! AAAAATTTGACATATTAAAT+AGG - Chr4:28576384-28576403 MsG0480019858.01.T01:intron 10.0%
!! GAATACAAAAAAAAAAAAAA+AGG - Chr4:28575020-28575039 MsG0480019858.01.T01:CDS 10.0%
!! TTTCTAATATATTGTTTCAA+TGG - Chr4:28575633-28575652 MsG0480019858.01.T01:intron 15.0%
!! AAACATTATTCAATATATGG+AGG + Chr4:28575513-28575532 None:intergenic 20.0%
!! AAATAAATTGACAATAATGC+AGG - Chr4:28574519-28574538 MsG0480019858.01.T01:intron 20.0%
!! AGGTATTAAAAATTGTCAAT+TGG - Chr4:28576323-28576342 MsG0480019858.01.T01:intron 20.0%
!! ATTACAAAGAATATTGTTTG+AGG + Chr4:28577160-28577179 None:intergenic 20.0%
!! CAAAAGAGTAGTTTATTATA+TGG + Chr4:28575082-28575101 None:intergenic 20.0%
!! TCCTTTGATATTAAATAACA+TGG - Chr4:28574894-28574913 MsG0480019858.01.T01:CDS 20.0%
!! TTATAAATCTTTCAACTCAT+TGG + Chr4:28578241-28578260 None:intergenic 20.0%
!! TTCATCTTCATTATAATTAC+AGG - Chr4:28574772-28574791 MsG0480019858.01.T01:intron 20.0%
!!! ATATGTCAAATTTTTGTCTA+TGG + Chr4:28576379-28576398 None:intergenic 20.0%
!!! CGGTTTAATTTAACTTAAAA+TGG - Chr4:28575353-28575372 MsG0480019858.01.T01:intron 20.0%
! AACTACAAAGAAAAGTTGTT+GGG + Chr4:28576233-28576252 None:intergenic 25.0%
! AAGACACAAAGCAATTATAT+AGG + Chr4:28577397-28577416 None:intergenic 25.0%
! AAGATTTAGATAGTGAATCT+GGG - Chr4:28578104-28578123 MsG0480019858.01.T01:intron 25.0%
! ACCAAAATAACAACATAACT+TGG + Chr4:28575451-28575470 None:intergenic 25.0%
! AGATTTAAACACTTTAAGTG+TGG - Chr4:28577663-28577682 MsG0480019858.01.T01:intron 25.0%
! AGCAGATTAAAAGAGTTTAA+TGG - Chr4:28578072-28578091 MsG0480019858.01.T01:intron 25.0%
! ATATCAACAAAGAAAGAATC+AGG - Chr4:28575400-28575419 MsG0480019858.01.T01:intron 25.0%
! ATTCAATATATGGAGGAAAT+AGG + Chr4:28575506-28575525 None:intergenic 25.0%
! ATTGGAAATTGATCTTTCAT+AGG - Chr4:28576833-28576852 MsG0480019858.01.T01:intron 25.0%
! ATTTACAGAAACAATGGTAA+AGG - Chr4:28578499-28578518 MsG0480019858.01.T01:CDS 25.0%
! CCAAAATAACAACATAACTT+GGG + Chr4:28575450-28575469 None:intergenic 25.0%
! TAATATTTGTTCAAGTGTAC+AGG - Chr4:28576352-28576371 MsG0480019858.01.T01:intron 25.0%
! TACAACATTTACAGAAACAA+TGG - Chr4:28578493-28578512 MsG0480019858.01.T01:CDS 25.0%
! TATTATATGGAAGAACATCA+TGG + Chr4:28575069-28575088 None:intergenic 25.0%
! TGTTCAAGAATTTATATCCA+GGG - Chr4:28574180-28574199 MsG0480019858.01.T01:CDS 25.0%
! TTAAGATTGATTGGAAGTTA+TGG + Chr4:28574742-28574761 None:intergenic 25.0%
! TTGACATATTAAATAGGTTC+TGG - Chr4:28576390-28576409 MsG0480019858.01.T01:intron 25.0%
! TTGTTCAAGAATTTATATCC+AGG - Chr4:28574179-28574198 MsG0480019858.01.T01:CDS 25.0%
! TTTACAGAAACAATGGTAAA+GGG - Chr4:28578500-28578519 MsG0480019858.01.T01:CDS 25.0%
! TTTGTTTCACTTATAGTTCT+TGG - Chr4:28574300-28574319 MsG0480019858.01.T01:intron 25.0%
!! GCCATGTTATTTAATATCAA+AGG + Chr4:28574898-28574917 None:intergenic 25.0%
!! TTTAGCTTATGTGTGTATTA+AGG - Chr4:28575572-28575591 MsG0480019858.01.T01:intron 25.0%
!!! ACACGTATTTTAAGATTGAT+TGG + Chr4:28574751-28574770 None:intergenic 25.0%
!!! ACTCAATTATGAACCTTTTT+TGG + Chr4:28574455-28574474 None:intergenic 25.0%
!!! ATATGACTTTTTCCTTTTTG+TGG + Chr4:28575384-28575403 None:intergenic 25.0%
!!! CTCAATTATGAACCTTTTTT+GGG + Chr4:28574454-28574473 None:intergenic 25.0%
!!! GCTTTAAAACTGATTTCATT+AGG + Chr4:28578547-28578566 None:intergenic 25.0%
!!! TTTTTAATCTTATTTACCGC+AGG - Chr4:28575216-28575235 MsG0480019858.01.T01:intron 25.0%
AAAGACCAATGTTACATTTG+GGG + Chr4:28575611-28575630 None:intergenic 30.0%
AAATGTTGTACAAACTGCAT+GGG - Chr4:28574573-28574592 MsG0480019858.01.T01:intron 30.0%
AACACTTGATATACAATCAG+TGG + Chr4:28577134-28577153 None:intergenic 30.0%
ACAACAAGAATCAACTCTAT+TGG - Chr4:28578283-28578302 MsG0480019858.01.T01:intron 30.0%
ATAGATTTACTCTTCTTAGC+AGG + Chr4:28577742-28577761 None:intergenic 30.0%
CAAACATTAAATTGCTCTTG+AGG - Chr4:28578423-28578442 MsG0480019858.01.T01:CDS 30.0%
CAAAGACCAATGTTACATTT+GGG + Chr4:28575612-28575631 None:intergenic 30.0%
CAATAAAGATGACAATCTTC+AGG + Chr4:28575889-28575908 None:intergenic 30.0%
CATAGGACAATTACCATATT+AGG - Chr4:28576850-28576869 MsG0480019858.01.T01:intron 30.0%
CTTAGGAGAAAATGTACTAA+AGG - Chr4:28577512-28577531 MsG0480019858.01.T01:intron 30.0%
GAACTACAAAGAAAAGTTGT+TGG + Chr4:28576234-28576253 None:intergenic 30.0%
GAAGATTTAGATAGTGAATC+TGG - Chr4:28578103-28578122 MsG0480019858.01.T01:intron 30.0%
GCAAATAGAACAATCAAGTT+GGG - Chr4:28575422-28575441 MsG0480019858.01.T01:intron 30.0%
GCTTATGTGTGTATTAAGTA+TGG - Chr4:28575544-28575563 MsG0480019858.01.T01:intron 30.0%
GTTATCATCAAAACTCTCAA+GGG + Chr4:28576302-28576321 None:intergenic 30.0%
TAAGTTAAATTAAACCGCAG+AGG + Chr4:28575350-28575369 None:intergenic 30.0%
TCAAAGACCAATGTTACATT+TGG + Chr4:28575613-28575632 None:intergenic 30.0%
TCCAAGAAAAAAGATCAGAA+GGG - Chr4:28577943-28577962 MsG0480019858.01.T01:CDS 30.0%
TCTTTCACACCTCTATATAA+AGG - Chr4:28576943-28576962 MsG0480019858.01.T01:intron 30.0%
TGTTATCATCAAAACTCTCA+AGG + Chr4:28576303-28576322 None:intergenic 30.0%
TTAATTGTGTGACACTATGT+GGG - Chr4:28574978-28574997 MsG0480019858.01.T01:CDS 30.0%
TTCTCAGTTCAAAATGTGTA+AGG + Chr4:28578218-28578237 None:intergenic 30.0%
TTGAGAAGGGTGATTAATTT+GGG - Chr4:28575663-28575682 MsG0480019858.01.T01:intron 30.0%
TTTGAGAAGGGTGATTAATT+TGG - Chr4:28575662-28575681 MsG0480019858.01.T01:intron 30.0%
TTTGTACAACATTTGACTGT+TGG + Chr4:28574567-28574586 None:intergenic 30.0%
! ATAGAGATATTTTTCCACTG+TGG - Chr4:28575287-28575306 MsG0480019858.01.T01:intron 30.0%
! CAATGATCTTTTGCCTAATA+TGG + Chr4:28576866-28576885 None:intergenic 30.0%
! CTATTTCTCTACCATCTAAA+GGG - Chr4:28577758-28577777 MsG0480019858.01.T01:intron 30.0%
! CTTGAGGATTTTATCATATC+TGG - Chr4:28578439-28578458 MsG0480019858.01.T01:CDS 30.0%
! GAACAATTTCAGCAAAGTTT+TGG + Chr4:28577016-28577035 None:intergenic 30.0%
! TAGAGATATTTTTCCACTGT+GGG - Chr4:28575288-28575307 MsG0480019858.01.T01:intron 30.0%
! TCTATTTCTCTACCATCTAA+AGG - Chr4:28577757-28577776 MsG0480019858.01.T01:intron 30.0%
! TGCAAGACTAAAAGCTTTAA+AGG - Chr4:28576582-28576601 MsG0480019858.01.T01:intron 30.0%
!! AAATTTTAGTGAACTCTCCT+TGG - Chr4:28577329-28577348 MsG0480019858.01.T01:intron 30.0%
!! AAGCTTTAAAGGTTGTTCAA+TGG - Chr4:28576593-28576612 MsG0480019858.01.T01:intron 30.0%
!! CACTTGTGTATCGATTAATT+TGG - Chr4:28574951-28574970 MsG0480019858.01.T01:CDS 30.0%
!! GTCATTTTGAAAGGATTTGA+AGG - Chr4:28576664-28576683 MsG0480019858.01.T01:intron 30.0%
!! TAATTTGGGGTGAGTTTTAA+TGG - Chr4:28575677-28575696 MsG0480019858.01.T01:intron 30.0%
!! TGAGAGTTTTGATGATAACA+AGG - Chr4:28576303-28576322 MsG0480019858.01.T01:intron 30.0%
!!! CCCAAGTTATGTTGTTATTT+TGG - Chr4:28575447-28575466 MsG0480019858.01.T01:intron 30.0%
AAAACTGATGGTTCATGGTA+TGG - Chr4:28574266-28574285 MsG0480019858.01.T01:intron 35.0%
AAAAGAGTTTAATGGCAACC+TGG - Chr4:28578080-28578099 MsG0480019858.01.T01:intron 35.0%
AAAATGGTGTGACCACAAAA+AGG - Chr4:28575369-28575388 MsG0480019858.01.T01:intron 35.0%
AAAGAGTTTAATGGCAACCT+GGG - Chr4:28578081-28578100 MsG0480019858.01.T01:intron 35.0%
AAATGTAGCTATGAGGTTAG+TGG - Chr4:28578156-28578175 MsG0480019858.01.T01:CDS 35.0%
AAGTTTCTAAGTAAGAGAGG+TGG - Chr4:28577910-28577929 MsG0480019858.01.T01:CDS 35.0%
AATCACCCTGAAAATCATCA+AGG + Chr4:28575845-28575864 None:intergenic 35.0%
ACAAGAAGCAGAATTTCATC+AGG - Chr4:28576556-28576575 MsG0480019858.01.T01:intron 35.0%
ACAATCTTCAGGACAATAGA+AGG + Chr4:28575878-28575897 None:intergenic 35.0%
ACACTAGAAGAGTGAAGAAA+CGG - Chr4:28576642-28576661 MsG0480019858.01.T01:intron 35.0%
ACACTCCATAGAATACAACA+AGG + Chr4:28576111-28576130 None:intergenic 35.0%
AGAAACAATGGTAAAGGGAT+TGG - Chr4:28578505-28578524 MsG0480019858.01.T01:CDS 35.0%
AGAAATACCAAAGTCAAACC+TGG + Chr4:28574624-28574643 None:intergenic 35.0%
AGAATTTATATCCAGGGCAT+AGG - Chr4:28574186-28574205 MsG0480019858.01.T01:CDS 35.0%
AGGAAGTTTCTAAGTAAGAG+AGG - Chr4:28577907-28577926 MsG0480019858.01.T01:CDS 35.0%
ATAAATTCCCAGTTGGAACA+AGG - Chr4:28574839-28574858 MsG0480019858.01.T01:CDS 35.0%
ATATATGGAGGAAATAGGCT+TGG + Chr4:28575501-28575520 None:intergenic 35.0%
ATGAAGCAAATGTAGCTATG+AGG - Chr4:28578149-28578168 MsG0480019858.01.T01:CDS 35.0%
ATTCGATGTTGTTGCATTCT+TGG - Chr4:28576074-28576093 MsG0480019858.01.T01:intron 35.0%
ATTGCTCATAAATTCCCAGT+TGG - Chr4:28574832-28574851 MsG0480019858.01.T01:CDS 35.0%
CAAATGTTGTACAAACTGCA+TGG - Chr4:28574572-28574591 MsG0480019858.01.T01:intron 35.0%
CAATGGCAATGATTTGAGAA+GGG - Chr4:28575650-28575669 MsG0480019858.01.T01:intron 35.0%
CACAAAAAACTGATGGTTCA+TGG - Chr4:28574261-28574280 MsG0480019858.01.T01:intron 35.0%
CACTCCATAGAATACAACAA+GGG + Chr4:28576110-28576129 None:intergenic 35.0%
CATAGAATACAACAAGGGAT+AGG + Chr4:28576105-28576124 None:intergenic 35.0%
CTAAGCTAAAAACACTGATC+AGG + Chr4:28577497-28577516 None:intergenic 35.0%
CTATCTATCATGCCCAAAAA+AGG - Chr4:28574439-28574458 MsG0480019858.01.T01:intron 35.0%
CTCACAATACAAAGAAACGA+CGG - Chr4:28574401-28574420 MsG0480019858.01.T01:intron 35.0%
CTCCAAGAAAAAAGATCAGA+AGG - Chr4:28577942-28577961 MsG0480019858.01.T01:CDS 35.0%
CTTATGGGTTTAATTCATGC+TGG - Chr4:28574598-28574617 MsG0480019858.01.T01:CDS 35.0%
GAGCTAAGGAATCAACAAAA+AGG - Chr4:28576425-28576444 MsG0480019858.01.T01:intron 35.0%
GAGGATACACAAAAAACTGA+TGG - Chr4:28574254-28574273 MsG0480019858.01.T01:intron 35.0%
GCAATAATCTGTGTTATGCT+CGG - Chr4:28575965-28575984 MsG0480019858.01.T01:intron 35.0%
GGCAAATAGAACAATCAAGT+TGG - Chr4:28575421-28575440 MsG0480019858.01.T01:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG + Chr4:28576955-28576974 None:intergenic 35.0%
GTTAATTGTGTGACACTATG+TGG - Chr4:28574977-28574996 MsG0480019858.01.T01:CDS 35.0%
TATTTGTAGTCCAGAGACTA+GGG + Chr4:28577545-28577564 None:intergenic 35.0%
TCAATGGCAATGATTTGAGA+AGG - Chr4:28575649-28575668 MsG0480019858.01.T01:intron 35.0%
TCACAATACAAAGAAACGAC+GGG - Chr4:28574402-28574421 MsG0480019858.01.T01:intron 35.0%
TCAGAGTTTATCATTGCCTT+TGG + Chr4:28578686-28578705 None:intergenic 35.0%
TGAAGACTTAGAGATTGGAA+AGG - Chr4:28576968-28576987 MsG0480019858.01.T01:intron 35.0%
TTAAATTAAACCGCAGAGGA+AGG + Chr4:28575346-28575365 None:intergenic 35.0%
TTCACTATCTAAATCTTCCC+AGG + Chr4:28578101-28578120 None:intergenic 35.0%
! AATGAGCGTTTTCTCTTTTG+AGG - Chr4:28575708-28575727 MsG0480019858.01.T01:intron 35.0%
! ATCTGAAAGCTTCTGAAGAA+GGG - Chr4:28578306-28578325 MsG0480019858.01.T01:intron 35.0%
! ATGAGCGTTTTCTCTTTTGA+GGG - Chr4:28575709-28575728 MsG0480019858.01.T01:intron 35.0%
! CTATCCCTTGTTGTATTCTA+TGG - Chr4:28576103-28576122 MsG0480019858.01.T01:intron 35.0%
! CTGCTTTCTGAATTTTCTTG+TGG + Chr4:28578057-28578076 None:intergenic 35.0%
! GAAGTCTATTGATTGTGTTC+AGG - Chr4:28577222-28577241 MsG0480019858.01.T01:intron 35.0%
! TGAGAAGGGTGATTAATTTG+GGG - Chr4:28575664-28575683 MsG0480019858.01.T01:intron 35.0%
! TTGAAAGGATTTGAAGGCAT+TGG - Chr4:28576670-28576689 MsG0480019858.01.T01:intron 35.0%
! TTTGATGACTTCCCTTTAGA+TGG + Chr4:28577772-28577791 None:intergenic 35.0%
!! ACTATGCCTTGATGATTTTC+AGG - Chr4:28575836-28575855 MsG0480019858.01.T01:intron 35.0%
!! ATTAATCTTAGCCTTAGAGC+TGG + Chr4:28578642-28578661 None:intergenic 35.0%
!! CTATGCCTTGATGATTTTCA+GGG - Chr4:28575837-28575856 MsG0480019858.01.T01:intron 35.0%
!! GAAGAAACGGTCATTTTGAA+AGG - Chr4:28576655-28576674 MsG0480019858.01.T01:intron 35.0%
!! TCTACTTCTGAAGTGAAGTT+CGG + Chr4:28577462-28577481 None:intergenic 35.0%
!!! CAGTTTTTTGTGTATCCTCA+AGG + Chr4:28574253-28574272 None:intergenic 35.0%
!!! CTGATCAGTGTTTTTAGCTT+AGG - Chr4:28577495-28577514 MsG0480019858.01.T01:CDS 35.0%
!!! TCCCTTCTGATCTTTTTTCT+TGG + Chr4:28577947-28577966 None:intergenic 35.0%
AAAAAAAGCAAGACACTCCC+CGG + Chr4:28576148-28576167 None:intergenic 40.0%
AACATCGAATTTCGAGAAGC+GGG + Chr4:28576064-28576083 None:intergenic 40.0%
ACAATACAAAGAAACGACGG+GGG - Chr4:28574404-28574423 MsG0480019858.01.T01:intron 40.0%
AGCATGTTGTGAATGCATCA+AGG - Chr4:28578564-28578583 MsG0480019858.01.T01:CDS 40.0%
AGGAGTGAAGACTTAGAGAT+TGG - Chr4:28576963-28576982 MsG0480019858.01.T01:intron 40.0%
AGTATCTGGCAAGGAAGAAA+AGG - Chr4:28577887-28577906 MsG0480019858.01.T01:intron 40.0%
AGTGTACTTCACGAATCATC+CGG - Chr4:28576126-28576145 MsG0480019858.01.T01:intron 40.0%
ATGTCCTCGAAAAGTTCTGT+GGG + Chr4:28574104-28574123 None:intergenic 40.0%
ATGTGTAAGGAGTTCTTCTC+TGG + Chr4:28578205-28578224 None:intergenic 40.0%
CAACATCGAATTTCGAGAAG+CGG + Chr4:28576065-28576084 None:intergenic 40.0%
CACAATACAAAGAAACGACG+GGG - Chr4:28574403-28574422 MsG0480019858.01.T01:intron 40.0%
CAGGTATATGTACCTCTTGA+AGG - Chr4:28574538-28574557 MsG0480019858.01.T01:intron 40.0%
CATATAGAGTTGAGCTCTGT+TGG - Chr4:28576253-28576272 MsG0480019858.01.T01:intron 40.0%
CATGAATATGTTGAGTGCAC+TGG - Chr4:28574134-28574153 MsG0480019858.01.T01:CDS 40.0%
CCATACCCCAAATGTAACAT+TGG - Chr4:28575603-28575622 MsG0480019858.01.T01:intron 40.0%
GATTTGACATGAACCTGTTG+AGG + Chr4:28574872-28574891 None:intergenic 40.0%
GGAAGAACAAAAGAGAGCTA+AGG - Chr4:28576411-28576430 MsG0480019858.01.T01:intron 40.0%
GGCATAGTGAATCACCAAAA+TGG + Chr4:28575824-28575843 None:intergenic 40.0%
GTATTTGTAGTCCAGAGACT+AGG + Chr4:28577546-28577565 None:intergenic 40.0%
GTGAATCACCAAAATGGAAG+AGG + Chr4:28575818-28575837 None:intergenic 40.0%
TAAAAAGCTTGCCTGCTAGA+TGG - Chr4:28577608-28577627 MsG0480019858.01.T01:intron 40.0%
TAGTGAATCTGGGTCTGAAA+AGG - Chr4:28578114-28578133 MsG0480019858.01.T01:intron 40.0%
TATAGGTTCCTTCCACAAAC+CGG + Chr4:28577380-28577399 None:intergenic 40.0%
TATGAAGAAGAGTCACCTGA+TGG - Chr4:28577811-28577830 MsG0480019858.01.T01:intron 40.0%
TCTGATGACTTCATCACTTC+AGG + Chr4:28576496-28576515 None:intergenic 40.0%
TGAAGATCCTACTGAGAAGA+TGG - Chr4:28577843-28577862 MsG0480019858.01.T01:intron 40.0%
TGCGACAATAAATGCTGAGA+TGG + Chr4:28576182-28576201 None:intergenic 40.0%
TGCTCAATAGCAGTAACCTT+AGG + Chr4:28577637-28577656 None:intergenic 40.0%
TGTGTAAGGAGTTCTTCTCT+GGG + Chr4:28578204-28578223 None:intergenic 40.0%
TGTTGTGAATGCATCAAGGA+AGG - Chr4:28578568-28578587 MsG0480019858.01.T01:CDS 40.0%
TTCCAACAAGCTTGAGTATC+TGG - Chr4:28577873-28577892 MsG0480019858.01.T01:intron 40.0%
TTGCTTCCATTTCAATGACG+CGG + Chr4:28575949-28575968 None:intergenic 40.0%
! AGATCTTGTTAGCTCTCTCA+AGG - Chr4:28577687-28577706 MsG0480019858.01.T01:intron 40.0%
! CCAATGTTACATTTGGGGTA+TGG + Chr4:28575606-28575625 None:intergenic 40.0%
! GATCTGAAAGCTTCTGAAGA+AGG - Chr4:28578305-28578324 MsG0480019858.01.T01:intron 40.0%
! GGTAAAGGGATTGGATTTTC+AGG - Chr4:28578514-28578533 MsG0480019858.01.T01:CDS 40.0%
! GGTTCATGGTATGGAAGTTT+TGG - Chr4:28574275-28574294 MsG0480019858.01.T01:intron 40.0%
! TATAGTTCTTGGTTCGCTCT+TGG - Chr4:28574311-28574330 MsG0480019858.01.T01:intron 40.0%
! TTGATTGTGTTCAGGAGCAT+AGG - Chr4:28577230-28577249 MsG0480019858.01.T01:intron 40.0%
!! AAAGGGATTGGATTTTCAGG+AGG - Chr4:28578517-28578536 MsG0480019858.01.T01:CDS 40.0%
!! AAGGGATTGGATTTTCAGGA+GGG - Chr4:28578518-28578537 MsG0480019858.01.T01:CDS 40.0%
!! CTACTTCTGAAGTGAAGTTC+GGG + Chr4:28577461-28577480 None:intergenic 40.0%
!! CTTCAGGAGCACTATTACTT+CGG + Chr4:28576480-28576499 None:intergenic 40.0%
!! TTCAGGAGCACTATTACTTC+GGG + Chr4:28576479-28576498 None:intergenic 40.0%
!!! ACGACTCTATTTTGATGTGC+TGG - Chr4:28576906-28576925 MsG0480019858.01.T01:intron 40.0%
!!! CTTTTTTCTTGGAGCTCTTG+TGG + Chr4:28577936-28577955 None:intergenic 40.0%
AAGGCAGTGGAACTTGTCTA+CGG + Chr4:28575327-28575346 None:intergenic 45.0%
AATACTCCTGTGAGTTCCTG+CGG + Chr4:28575235-28575254 None:intergenic 45.0%
AATGCATCAAGGAAGGCTGA+AGG - Chr4:28578575-28578594 MsG0480019858.01.T01:CDS 45.0%
ACAAACTGCATGGGCTCTTA+TGG - Chr4:28574582-28574601 MsG0480019858.01.T01:intron 45.0%
ACAAGCTTGAGTATCTGGCA+AGG - Chr4:28577878-28577897 MsG0480019858.01.T01:intron 45.0%
AGAAAAGTTGTTGGGAGACG+TGG + Chr4:28576225-28576244 None:intergenic 45.0%
AGCATAGCCATCTTCTCAGT+AGG + Chr4:28577853-28577872 None:intergenic 45.0%
AGGTTTCAAACCCTAGTCTC+TGG - Chr4:28577532-28577551 MsG0480019858.01.T01:intron 45.0%
ATGTTCCCTCAGACTTGGAA+TGG - Chr4:28576810-28576829 MsG0480019858.01.T01:intron 45.0%
CAAACTGCATGGGCTCTTAT+GGG - Chr4:28574583-28574602 MsG0480019858.01.T01:intron 45.0%
CAATACAAAGAAACGACGGG+GGG - Chr4:28574405-28574424 MsG0480019858.01.T01:intron 45.0%
CAATGCAGTTCGATTCCTTG+AGG - Chr4:28574235-28574254 MsG0480019858.01.T01:intron 45.0%
CATGTCCTCGAAAAGTTCTG+TGG + Chr4:28574105-28574124 None:intergenic 45.0%
CCAATCCATTCCAAGTCTGA+GGG + Chr4:28576818-28576837 None:intergenic 45.0%
CCAATCTCCTTGTTCCAACT+GGG + Chr4:28574849-28574868 None:intergenic 45.0%
CCATTTCAATGACGCGGTAA+AGG + Chr4:28575943-28575962 None:intergenic 45.0%
CCTTTACCGCGTCATTGAAA+TGG - Chr4:28575940-28575959 MsG0480019858.01.T01:intron 45.0%
CTCAAGGAATCGAACTGCAT+TGG + Chr4:28574237-28574256 None:intergenic 45.0%
GAAGGGATGCTTCAACTGTA+AGG - Chr4:28577960-28577979 MsG0480019858.01.T01:intron 45.0%
GCCAAAGAACTCTAAGCCAA+AGG - Chr4:28578667-28578686 MsG0480019858.01.T01:CDS 45.0%
GTAAAGGAGCTCGTCAAAGA+GGG + Chr4:28575927-28575946 None:intergenic 45.0%
GTGTACTTCACGAATCATCC+GGG - Chr4:28576127-28576146 MsG0480019858.01.T01:intron 45.0%
TAAAGGAGCTCGTCAAAGAG+GGG + Chr4:28575926-28575945 None:intergenic 45.0%
TATTTACCGCAGGAACTCAC+AGG - Chr4:28575226-28575245 MsG0480019858.01.T01:intron 45.0%
TCCAATCCATTCCAAGTCTG+AGG + Chr4:28576819-28576838 None:intergenic 45.0%
TCTTCATCAGAGTCTCCATC+AGG + Chr4:28577829-28577848 None:intergenic 45.0%
TGCCAGATACTCAAGCTTGT+TGG + Chr4:28577878-28577897 None:intergenic 45.0%
TGTACTTCACGAATCATCCG+GGG - Chr4:28576128-28576147 MsG0480019858.01.T01:intron 45.0%
! AACTCTCCTTGGAAGTGCAA+GGG - Chr4:28577340-28577359 MsG0480019858.01.T01:intron 45.0%
! AATTTTGCAGCACGATGGAG+AGG + Chr4:28574815-28574834 None:intergenic 45.0%
! ACAAGACTACTTCCGGTTTG+TGG - Chr4:28577365-28577384 MsG0480019858.01.T01:intron 45.0%
! CAATCCCACAGAACTTTTCG+AGG - Chr4:28574097-28574116 MsG0480019858.01.T01:CDS 45.0%
! GCCTTTGGCTTAGAGTTCTT+TGG + Chr4:28578671-28578690 None:intergenic 45.0%
! TGAGCAATTTTGCAGCACGA+TGG + Chr4:28574820-28574839 None:intergenic 45.0%
!! AACAGCGACTATTGACTTCC+AGG - Chr4:28575767-28575786 MsG0480019858.01.T01:intron 45.0%
!! ACAGCGACTATTGACTTCCA+GGG - Chr4:28575768-28575787 MsG0480019858.01.T01:intron 45.0%
!! CACAGAACTTTTCGAGGACA+TGG - Chr4:28574103-28574122 MsG0480019858.01.T01:CDS 45.0%
!! AATACAAAAAAAAAAAAAAA+GGG - Chr4:28575021-28575040 MsG0480019858.01.T01:CDS 5.0%
!! CATTAAAAAAAAAAAAAAAT+TGG - Chr4:28575471-28575490 MsG0480019858.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+AGG - Chr4:28574663-28574682 MsG0480019858.01.T01:intron 5.0%
AAAGGAGCTCGTCAAAGAGG+GGG + Chr4:28575925-28575944 None:intergenic 50.0%
AAGGGGGACAAGACTACTTC+CGG - Chr4:28577358-28577377 MsG0480019858.01.T01:intron 50.0%
AATCCAACCCCGTCATAGAG+GGG + Chr4:28576034-28576053 None:intergenic 50.0%
ACCTGAAGCTTCCAGCTCTA+AGG - Chr4:28578628-28578647 MsG0480019858.01.T01:CDS 50.0%
ACCTTAGGTCTCCATCTAGC+AGG + Chr4:28577622-28577641 None:intergenic 50.0%
AGTCCTTAGCCCCTCTATGA+CGG - Chr4:28576022-28576041 MsG0480019858.01.T01:intron 50.0%
ATCTCGTTCTTCCTATGCCC+TGG + Chr4:28574200-28574219 None:intergenic 50.0%
CAACGATGTTCCCTCAGACT+TGG - Chr4:28576805-28576824 MsG0480019858.01.T01:intron 50.0%
CAATCCAACCCCGTCATAGA+GGG + Chr4:28576035-28576054 None:intergenic 50.0%
CCAAAATGGAAGAGGTCGTC+CGG + Chr4:28575810-28575829 None:intergenic 50.0%
CCCAGTTGGAACAAGGAGAT+TGG - Chr4:28574846-28574865 MsG0480019858.01.T01:CDS 50.0%
CCCTCAGACTTGGAATGGAT+TGG - Chr4:28576815-28576834 MsG0480019858.01.T01:intron 50.0%
GAGACACAACAGAGTAGTGG+AGG + Chr4:28576754-28576773 None:intergenic 50.0%
GCAGAGACACAACAGAGTAG+TGG + Chr4:28576757-28576776 None:intergenic 50.0%
GCCAATCTCCTTGTTCCAAC+TGG + Chr4:28574850-28574869 None:intergenic 50.0%
GGGTCTGAAAAGGAAGAAGC+TGG - Chr4:28578124-28578143 MsG0480019858.01.T01:intron 50.0%
GGGTTTAATTCATGCTGGCC+AGG - Chr4:28574603-28574622 MsG0480019858.01.T01:CDS 50.0%
GGTAAAGGAGCTCGTCAAAG+AGG + Chr4:28575928-28575947 None:intergenic 50.0%
GTTCTGTGGGATTGAGTAGC+TGG + Chr4:28574091-28574110 None:intergenic 50.0%
TATTCAGCTAGAGCCCACAG+TGG + Chr4:28575304-28575323 None:intergenic 50.0%
! ACTCTCCTTGGAAGTGCAAG+GGG - Chr4:28577341-28577360 MsG0480019858.01.T01:intron 50.0%
! AGTTCGGGACTAACTTGCAG+CGG + Chr4:28577446-28577465 None:intergenic 50.0%
! AGTTCTTGGTTCGCTCTTGG+TGG - Chr4:28574314-28574333 MsG0480019858.01.T01:intron 50.0%
! ATGCTGGCCAGGTTTGACTT+TGG - Chr4:28574614-28574633 MsG0480019858.01.T01:CDS 50.0%
! CAACAGAGTAGTGGAGGTAG+TGG + Chr4:28576748-28576767 None:intergenic 50.0%
! GAACTCTCCTTGGAAGTGCA+AGG - Chr4:28577339-28577358 MsG0480019858.01.T01:intron 50.0%
! GACTACTTCCGGTTTGTGGA+AGG - Chr4:28577369-28577388 MsG0480019858.01.T01:intron 50.0%
! GCTTCTGAAGAAGGGCTTAG+AGG - Chr4:28578314-28578333 MsG0480019858.01.T01:CDS 50.0%
!! ACAAGGAGATTGGCCTCAAC+AGG - Chr4:28574856-28574875 MsG0480019858.01.T01:CDS 50.0%
!! GACTGTTGGCTTCCTTCAAG+AGG + Chr4:28574553-28574572 None:intergenic 50.0%
ACAAAGAAACGACGGGGGGT+GGG - Chr4:28574409-28574428 MsG0480019858.01.T01:intron 55.0%
AGTTCCACTGCCTTCCTCTG+CGG - Chr4:28575333-28575352 MsG0480019858.01.T01:intron 55.0%
CAGCACGATGGAGAGGAGTA+GGG + Chr4:28574808-28574827 None:intergenic 55.0%
CCAATCCAACCCCGTCATAG+AGG + Chr4:28576036-28576055 None:intergenic 55.0%
GCCTGCTAGATGGAGACCTA+AGG - Chr4:28577618-28577637 MsG0480019858.01.T01:intron 55.0%
GCCTTAGAGCTGGAAGCTTC+AGG + Chr4:28578632-28578651 None:intergenic 55.0%
GGCTAAGGACTGACAGGTCT+AGG + Chr4:28576013-28576032 None:intergenic 55.0%
GTCCTTAGCCCCTCTATGAC+GGG - Chr4:28576023-28576042 MsG0480019858.01.T01:intron 55.0%
GTCTGAGGGAACATCGTTGC+AGG + Chr4:28576804-28576823 None:intergenic 55.0%
TAAACCGCAGAGGAAGGCAG+TGG + Chr4:28575340-28575359 None:intergenic 55.0%
TACAAAGAAACGACGGGGGG+TGG - Chr4:28574408-28574427 MsG0480019858.01.T01:intron 55.0%
TAGAGGGGCTAAGGACTGAC+AGG + Chr4:28576019-28576038 None:intergenic 55.0%
TCCTTAGCCCCTCTATGACG+GGG - Chr4:28576024-28576043 MsG0480019858.01.T01:intron 55.0%
TTGTCCCCCTTGCACTTCCA+AGG + Chr4:28577349-28577368 None:intergenic 55.0%
! CCGGACGACCTCTTCCATTT+TGG - Chr4:28575807-28575826 MsG0480019858.01.T01:intron 55.0%
! CCTCTATGACGGGGTTGGAT+TGG - Chr4:28576033-28576052 MsG0480019858.01.T01:intron 55.0%
! CTCTCCTTGGAAGTGCAAGG+GGG - Chr4:28577342-28577361 MsG0480019858.01.T01:intron 55.0%
! CTTGGTGGTTTAGCAGCTGC+TGG - Chr4:28574329-28574348 MsG0480019858.01.T01:intron 55.0%
!! GCGACTATTGACTTCCAGGG+TGG - Chr4:28575771-28575790 MsG0480019858.01.T01:intron 55.0%
ACCCCGTCATAGAGGGGCTA+AGG + Chr4:28576028-28576047 None:intergenic 60.0%
CAAAGAAACGACGGGGGGTG+GGG - Chr4:28574410-28574429 MsG0480019858.01.T01:intron 60.0%
GCAGCACGATGGAGAGGAGT+AGG + Chr4:28574809-28574828 None:intergenic 60.0%
! TAGCCCCTCTATGACGGGGT+TGG - Chr4:28576028-28576047 MsG0480019858.01.T01:intron 60.0%
TCCAGGGTGGAGCCTCACCT+CGG - Chr4:28575784-28575803 MsG0480019858.01.T01:intron 65.0%
TGGAAGAGGTCGTCCGGCCG+AGG + Chr4:28575804-28575823 None:intergenic 70.0%
GAGGTCGTCCGGCCGAGGTG+AGG + Chr4:28575799-28575818 None:intergenic 75.0%
GCCGAGGTGAGGCTCCACCC+TGG + Chr4:28575788-28575807 None:intergenic 75.0%
GGGTGGAGCCTCACCTCGGC+CGG - Chr4:28575788-28575807 MsG0480019858.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 28574011 28578757 28574011 ID=MsG0480019858.01;Name=MsG0480019858.01
Chr4 mRNA 28574011 28578757 28574011 ID=MsG0480019858.01.T01;Parent=MsG0480019858.01;Name=MsG0480019858.01.T01;_AED=0.47;_eAED=0.52;_QI=0|0.5|0.28|1|0.83|1|7|0|477
Chr4 exon 28578308 28578757 28578308 ID=MsG0480019858.01.T01:exon:9460;Parent=MsG0480019858.01.T01
Chr4 exon 28578144 28578227 28578144 ID=MsG0480019858.01.T01:exon:9459;Parent=MsG0480019858.01.T01
Chr4 exon 28577891 28577974 28577891 ID=MsG0480019858.01.T01:exon:9458;Parent=MsG0480019858.01.T01
Chr4 exon 28577414 28577530 28577414 ID=MsG0480019858.01.T01:exon:9457;Parent=MsG0480019858.01.T01
Chr4 exon 28574792 28575197 28574792 ID=MsG0480019858.01.T01:exon:9456;Parent=MsG0480019858.01.T01
Chr4 exon 28574585 28574655 28574585 ID=MsG0480019858.01.T01:exon:9455;Parent=MsG0480019858.01.T01
Chr4 exon 28574011 28574232 28574011 ID=MsG0480019858.01.T01:exon:9454;Parent=MsG0480019858.01.T01
Chr4 CDS 28578308 28578757 28578308 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28578144 28578227 28578144 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28577891 28577974 28577891 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28577414 28577530 28577414 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28574792 28575197 28574792 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28574585 28574655 28574585 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Chr4 CDS 28574011 28574232 28574011 ID=MsG0480019858.01.T01:cds;Parent=MsG0480019858.01.T01
Gene Sequence

>MsG0480019858.01.T01

ATGGTTGGAAGTAAGTATTGTATTGATGTAGCTAAATATCAATTAGTTAACAAACTAATTAGCTTTATTATTTATTTCCAGCTACTCAATCCCACAGAACTTTTCGAGGACATGGTAATTGAACATGAATATGTTGAGTGCACTGGAACAGCGATTCAAACTTTAGTTTTGTTCAAGAATTTATATCCAGGGCATAGGAAGAACGAGATAGATAACTTGATTGCCAATGCAGTTCGATTCCTTGAGGATACACAAAAAACTGATGGTTCATGGTATGGAAGTTTTGGAATTTGTTTCACTTATAGTTCTTGGTTCGCTCTTGGTGGTTTAGCAGCTGCTGGCAAGAATTATTCTAATTGCGCTGCTATTCGTAACGCTGTTAAATTTCTTCTCACAATACAAAGAAACGACGGGGGGTGGGGAGAGAGCTATCTATCATGCCCAAAAAAGGTATATGTACCTCTTGAAGGAAGCCAACAGTCAAATGTTGTACAAACTGCATGGGCTCTTATGGGTTTAATTCATGCTGGCCAGGCAGAGATTGACCCTACTCCTCTCCATCGTGCTGCAAAATTGCTCATAAATTCCCAGTTGGAACAAGGAGATTGGCCTCAACAGGAACTCACAGGAGTATTCATGAAAAATTGTATGTTGCATTATACAATGTATAGAGATATTTTTCCACTGTGGGCTCTAGCTGAATACCGTAGACAAGTTCCACTGCCTTCCTCTGCGAAGAGTTATGTTGCTTCTGATCATGTTAGCAAGATACTAAAAAGCTTGCCTGCTAGATGGAGACCTAAGGTTACTGCTATTGAGCAAGCTAAAGATTTAAACACTTTAAGTGTGGAAGATCTTGTTAGCTCTCTCAAGGTTCATGAGATAAGTCTAAATGAACATGAGCCTGCTAAGAAGAGTAAATCTATTTCTCTACCATCTAAAGGGAAGTCATCAAAAGCTCTTAAAGTTATTAAATATGAAGAAGAGTCACCTGATGGAGACTCTGATGAAGATCCTACTGAGAAGATGGCTATGCTTTCCAACAAGCTTGAGTATCTGGCAAGGAAGAAAAGGAAGTTTCTAAGTAAGAGAGGTGGCCACAAGAGCTCCAAGAAAAAAGATCAGAAGGGATGCTTCAACTATAGTGAATCTGGGTCTGAAAAGGAAGAAGCTGGAGATGAAGCAAATGTAGCTATGAGGTTAGTGGCTACTGAGGGAAACCTAATGAAATCAGTTTTAAAGCATGTTGTGAATGCATCAAGGAAGGCTGAAGGTGCTAAGTTTGAAACTGTAGTTCAGTCAGAACCTGAAGCTTCCAGCTCTAAGGCTAAGATTAATTCAAAGCCAAAGAACTCTAAGCCAAAGGCAATGATAAACTCTGATTCTAAGACTTCAAAGATCAAGATTCTAAAGAGATCAAAACATGTTCCTTAG
Protein sequence

>MsG0480019858.01.T01

MVGSKYCIDVAKYQLVNKLISFIIYFQLLNPTELFEDMVIEHEYVECTGTAIQTLVLFKNLYPGHRKNEIDNLIANAVRFLEDTQKTDGSWYGSFGICFTYSSWFALGGLAAAGKNYSNCAAIRNAVKFLLTIQRNDGGWGESYLSCPKKVYVPLEGSQQSNVVQTAWALMGLIHAGQAEIDPTPLHRAAKLLINSQLEQGDWPQQELTGVFMKNCMLHYTMYRDIFPLWALAEYRRQVPLPSSAKSYVASDHVSKILKSLPARWRPKVTAIEQAKDLNTLSVEDLVSSLKVHEISLNEHEPAKKSKSISLPSKGKSSKALKVIKYEEESPDGDSDEDPTEKMAMLSNKLEYLARKKRKFLSKRGGHKSSKKKDQKGCFNYSESGSEKEEAGDEANVAMRLVATEGNLMKSVLKHVVNASRKAEGAKFETVVQSEPEASSSKAKINSKPKNSKPKAMINSDSKTSKIKILKRSKHVP*