AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044728.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044728.01.T01 MTR_8g055880 96.403 278 10 0 14 291 59 336 0.0 553
MsG0880044728.01.T01 MTR_8g055880 96.471 255 9 0 37 291 1 255 0.0 509
MsG0880044728.01.T01 MTR_8g055880 90.254 236 22 1 56 291 3 237 1.29e-153 429
MsG0880044728.01.T01 MTR_8g055880 96.111 180 7 0 14 193 59 238 2.16e-125 357
MsG0880044728.01.T01 MTR_8g055880 94.798 173 9 0 24 196 69 241 4.65e-119 342
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044728.01.T01 AT1G14300 73.022 278 75 0 14 291 59 336 2.37e-150 424
MsG0880044728.01.T01 AT1G14300 64.557 316 74 1 14 291 59 374 1.85e-143 409

Find 109 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACTTGAGTACGAATTTC+TGG 0.204303 8:+48380115 None:intergenic
GAATACTTCTCTAGGGTATT+TGG 0.218856 8:-48377124 MsG0880044728.01.T01:three_prime_UTR
TGATGAGGGCGTGTTGTTTC+AGG 0.275666 8:-48383027 MsG0880044728.01.T01:CDS
TCGTTTGCTTGTTATGCTTT+TGG 0.276364 8:-48382874 MsG0880044728.01.T01:CDS
TAACCGACTTGGACTATTCT+AGG 0.276381 8:+48377965 None:intergenic
TTACAACACTAGAGTTCTTA+TGG 0.278709 8:+48377676 None:intergenic
CGAATTTCTGGATCATTAAC+AGG 0.282853 8:+48380127 None:intergenic
TCATACGCTCCCATCACTTT+TGG 0.288944 8:+48377926 None:intergenic
CTTTGTGATGTTAACAAGTA+TGG 0.309114 8:+48381783 None:intergenic
CATATACTTGATCTTATTGC+AGG 0.326191 8:-48380086 MsG0880044728.01.T01:intron
TGGTAATTCCAAATTCAAAA+TGG 0.326578 8:+48377631 None:intergenic
TGGTACTGATTCCTTGCTTC+AGG 0.336668 8:-48382829 MsG0880044728.01.T01:intron
GGAGTTTATAACCTTGTTGC+TGG 0.353671 8:+48380915 None:intergenic
CTGCAATAAGATCAAGTATA+TGG 0.360937 8:+48380087 None:intergenic
CTGGCCTGCATTACTTCTTC+CGG 0.363720 8:-48380941 MsG0880044728.01.T01:CDS
AGATACTGAAACGGAGTCTT+TGG 0.365871 8:+48377405 None:intergenic
CTTACATATCCTAAAAGATA+TGG 0.375413 8:+48377611 None:intergenic
TGTTTCAAGAGACCCCGTTT+TGG 0.375889 8:+48381730 None:intergenic
ATTCTGAGCTCTTTGCGAAT+AGG 0.399265 8:-48377243 MsG0880044728.01.T01:three_prime_UTR
AGGCAGGTCGAAGAGCCTTT+TGG 0.400322 8:-48378000 MsG0880044728.01.T01:CDS
GTTGAGAGGGAGTGGAATGT+TGG 0.417789 8:-48377037 MsG0880044728.01.T01:three_prime_UTR
GCTTCTACTCGACCCAAAAC+GGG 0.420535 8:-48381743 MsG0880044728.01.T01:CDS
GGTGGAATGGGAGTGTTTGA+TGG 0.425104 8:-48377165 MsG0880044728.01.T01:three_prime_UTR
AGCTTCTACTCGACCCAAAA+CGG 0.435211 8:-48381744 MsG0880044728.01.T01:CDS
CCTCCATTGTTGCTAAACTT+AGG 0.436704 8:-48377476 MsG0880044728.01.T01:three_prime_UTR
TGATATTGCTATCAGGTCTC+TGG 0.439026 8:-48381033 MsG0880044728.01.T01:intron
TGCAGTGTAGGCGGTGGAAT+GGG 0.450949 8:-48377177 MsG0880044728.01.T01:three_prime_UTR
TATGAGGAGTTGAGAGGGAG+TGG 0.453146 8:-48377045 MsG0880044728.01.T01:three_prime_UTR
AACAGCTCATTGAGAAAGAA+AGG 0.453988 8:-48381685 MsG0880044728.01.T01:CDS
ATCCAGTTGGTTAACGGCAG+CGG 0.457409 8:-48377770 MsG0880044728.01.T01:intron
ACTCCGTTTCAGTATCTCAT+AGG 0.459733 8:-48377399 MsG0880044728.01.T01:three_prime_UTR
GAAGTAACGAATACTTCTCT+AGG 0.462518 8:-48377132 MsG0880044728.01.T01:three_prime_UTR
GGAGTCTTTGGCACAGGCAA+TGG 0.466779 8:+48377417 None:intergenic
GTTTCGATAGAATTTCGAAA+GGG 0.468517 8:-48377071 MsG0880044728.01.T01:three_prime_UTR
CCTCATCTTCGTAACCGACT+TGG 0.469208 8:+48377954 None:intergenic
TTCAAATCTTGCGGAGGAGA+TGG 0.479172 8:-48382958 MsG0880044728.01.T01:CDS
AGAAATTCGTACTCAAGTAT+TGG 0.479399 8:-48380113 MsG0880044728.01.T01:CDS
GTTGGTTAACGGCAGCGGTA+TGG 0.481170 8:-48377765 MsG0880044728.01.T01:CDS
CACAAAGCAGCAGGCAGGGA+GGG 0.482603 8:-48381767 MsG0880044728.01.T01:CDS
AACATCACAAAGCAGCAGGC+AGG 0.486480 8:-48381772 MsG0880044728.01.T01:CDS
TAAGAACTCTAGTGTTGTAA+TGG 0.487634 8:-48377673 MsG0880044728.01.T01:three_prime_UTR
AATTTCGAAAGGGGTGTATG+AGG 0.491277 8:-48377061 MsG0880044728.01.T01:three_prime_UTR
AGAAATCATCGGAAAGAAGA+TGG 0.495648 8:+48377440 None:intergenic
ATAACCTTGTTGCTGGCTAC+CGG 0.503927 8:+48380922 None:intergenic
AGGCCCATTTACAGACCAAA+AGG 0.505026 8:+48377985 None:intergenic
CTATCGAAACTTTCAAAACC+AGG 0.507104 8:+48377084 None:intergenic
GGGTGTATGAGGAGTTGAGA+GGG 0.509248 8:-48377050 MsG0880044728.01.T01:three_prime_UTR
TTCGCAAAATTCAAATCTTG+CGG 0.513613 8:-48382967 MsG0880044728.01.T01:CDS
GGAGTGTTTGATGGTGGCAG+TGG 0.516576 8:-48377156 MsG0880044728.01.T01:three_prime_UTR
GTATGAGCAACTAGGATCCT+TGG 0.516650 8:-48377909 MsG0880044728.01.T01:intron
ACAGCTCATTGAGAAAGAAA+GGG 0.517237 8:-48381684 MsG0880044728.01.T01:CDS
TCAAAATGGAAAATTTGACT+TGG 0.527523 8:+48377645 None:intergenic
TGAGGAAGATCCAAAAGTGA+TGG 0.528777 8:-48377936 MsG0880044728.01.T01:CDS
CCATTGTTGCTAAACTTAGG+AGG 0.529032 8:-48377473 MsG0880044728.01.T01:three_prime_UTR
TACTCTGTCGTCTCAGTGGA+TGG 0.536104 8:+48377737 None:intergenic
ATGACATACCATCCTTCTCA+TGG 0.539353 8:+48382221 None:intergenic
CCTCCTAAGTTTAGCAACAA+TGG 0.557936 8:+48377473 None:intergenic
AATCTCACTCAACTTGATGC+TGG 0.559771 8:-48382849 MsG0880044728.01.T01:CDS
CATTGTTGCTAAACTTAGGA+GGG 0.561868 8:-48377472 MsG0880044728.01.T01:three_prime_UTR
TTGAAGTGCAGTGTAGGCGG+TGG 0.565015 8:-48377183 MsG0880044728.01.T01:three_prime_UTR
TTGTAGAACCACCCATGAGA+AGG 0.570329 8:-48382233 MsG0880044728.01.T01:CDS
TGTTAACATCACAAAGCAGC+AGG 0.576040 8:-48381776 MsG0880044728.01.T01:CDS
GTTGTTTCAGGAAGTTTCTG+AGG 0.579566 8:-48383015 MsG0880044728.01.T01:CDS
GAGGAAGATCCAAAAGTGAT+GGG 0.580154 8:-48377935 MsG0880044728.01.T01:CDS
GAAATCATCGGAAAGAAGAT+GGG 0.580208 8:+48377441 None:intergenic
GTGCAGTGTAGGCGGTGGAA+TGG 0.582179 8:-48377178 MsG0880044728.01.T01:three_prime_UTR
GCTACCGGAAGAAGTAATGC+AGG 0.588865 8:+48380937 None:intergenic
AAGTAACGAATACTTCTCTA+GGG 0.591358 8:-48377131 MsG0880044728.01.T01:three_prime_UTR
CCGTTTCAGTATCTCATAGG+TGG 0.593020 8:-48377396 MsG0880044728.01.T01:three_prime_UTR
ACATCACAAAGCAGCAGGCA+GGG 0.596426 8:-48381771 MsG0880044728.01.T01:CDS
TATATGTTATGAAGCTTGTG+AGG 0.597267 8:-48382261 MsG0880044728.01.T01:CDS
CCACCTATGAGATACTGAAA+CGG 0.598815 8:+48377396 None:intergenic
TTGCCTCATTGTACGCGTGG+TGG 0.604456 8:+48377370 None:intergenic
ATGGGAGCGTATGAGCAACT+AGG 0.606147 8:-48377917 MsG0880044728.01.T01:CDS
ATTACATTGAAGTGCAGTGT+AGG 0.606227 8:-48377189 MsG0880044728.01.T01:three_prime_UTR
ATAAAAGCACACCTGAAGCA+AGG 0.606782 8:+48382818 None:intergenic
TGACATACCATCCTTCTCAT+GGG 0.607739 8:+48382222 None:intergenic
TACGCAGATCTACAATGAGG+AGG 0.609812 8:-48380203 MsG0880044728.01.T01:intron
GGGGTGTATGAGGAGTTGAG+AGG 0.610075 8:-48377051 MsG0880044728.01.T01:three_prime_UTR
AGTGCAGTCCCAAGTTCAAG+CGG 0.616810 8:+48380166 None:intergenic
ACAGGCAATGGAGAAATCAT+CGG 0.617499 8:+48377429 None:intergenic
AGTTTCGATAGAATTTCGAA+AGG 0.617505 8:-48377072 MsG0880044728.01.T01:three_prime_UTR
GCAAAATTCAAATCTTGCGG+AGG 0.619994 8:-48382964 MsG0880044728.01.T01:CDS
TGAAACGGAGTCTTTGGCAC+AGG 0.622251 8:+48377411 None:intergenic
GGTTAACGGCAGCGGTATGG+AGG 0.622742 8:-48377762 MsG0880044728.01.T01:CDS
CTGCACTTCAATGTAATCAG+TGG 0.623517 8:+48377195 None:intergenic
CATCGGAAAGAAGATGGGTG+AGG 0.624075 8:+48377446 None:intergenic
CAGCTCATTGAGAAAGAAAG+GGG 0.629207 8:-48381683 MsG0880044728.01.T01:intron
TTTCGATAGAATTTCGAAAG+GGG 0.630008 8:-48377070 MsG0880044728.01.T01:three_prime_UTR
TCTTTGCCTCATTGTACGCG+TGG 0.634546 8:+48377367 None:intergenic
CCAAGTCGGTTACGAAGATG+AGG 0.637576 8:-48377954 MsG0880044728.01.T01:CDS
TATACACACCGCAGAGTGAG+TGG 0.637756 8:-48377556 MsG0880044728.01.T01:three_prime_UTR
TAACTACTCTGTCGTCTCAG+TGG 0.638294 8:+48377733 None:intergenic
TCACAAAGCAGCAGGCAGGG+AGG 0.643237 8:-48381768 MsG0880044728.01.T01:CDS
TTGTCAGATTGATGATGAGA+AGG 0.644227 8:-48382293 MsG0880044728.01.T01:intron
GAGACTTGTTGAAACAACAA+TGG 0.650027 8:-48382928 MsG0880044728.01.T01:CDS
TGTTGGAACGTGAGACCGAG+AGG 0.650563 8:-48377020 MsG0880044728.01.T01:three_prime_UTR
ACATTGAAGTGCAGTGTAGG+CGG 0.654324 8:-48377186 MsG0880044728.01.T01:three_prime_UTR
GGAATGGGAGTGTTTGATGG+TGG 0.655882 8:-48377162 MsG0880044728.01.T01:three_prime_UTR
AGAACCACCCATGAGAAGGA+TGG 0.660928 8:-48382229 MsG0880044728.01.T01:intron
TCTTCCGGTAGCCAGCAACA+AGG 0.670469 8:-48380926 MsG0880044728.01.T01:intron
CATACCATCCTTCTCATGGG+TGG 0.670473 8:+48382225 None:intergenic
CCTAAGTTTAGCAACAATGG+AGG 0.675177 8:+48377476 None:intergenic
AGCATTTACCACTCACTCTG+CGG 0.679173 8:+48377548 None:intergenic
ATTGATGATGAGAAGGTGCG+TGG 0.685770 8:-48382286 MsG0880044728.01.T01:CDS
GGGCCTAGAATAGTCCAAGT+CGG 0.690047 8:-48377968 MsG0880044728.01.T01:CDS
CTTCTACTCGACCCAAAACG+GGG 0.692630 8:-48381742 MsG0880044728.01.T01:CDS
TTACCACCACGCGTACAATG+AGG 0.723287 8:-48377373 MsG0880044728.01.T01:three_prime_UTR
AAACGAGTGACACAACACTG+AGG 0.786400 8:+48382891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTATTTAAATTAAGAG+TGG + Chr8:48381816-48381835 None:intergenic 10.0%
!! TAATTATTTAAATTAAGAGT+GGG + Chr8:48381815-48381834 None:intergenic 10.0%
!!! AATATTTTAAAAACAATTGA+TGG + Chr8:48380467-48380486 None:intergenic 10.0%
!!! CAATTGTTTTTAAAATATTT+GGG - Chr8:48380468-48380487 MsG0880044728.01.T01:intron 10.0%
!!! TCAATTGTTTTTAAAATATT+TGG - Chr8:48380467-48380486 MsG0880044728.01.T01:intron 10.0%
!! AAAAGTTAAAAGTAAGAAAT+TGG - Chr8:48380519-48380538 MsG0880044728.01.T01:intron 15.0%
!! AATTAAAAAATAACACAACT+CGG + Chr8:48381424-48381443 None:intergenic 15.0%
!! ACTTTGTAGAATTTATTATT+AGG - Chr8:48380556-48380575 MsG0880044728.01.T01:intron 15.0%
!! GTAATGATAATTACATATAA+TGG - Chr8:48377324-48377343 MsG0880044728.01.T01:three_prime_UTR 15.0%
!! GTTAATGTTAAAAATTGTAT+GGG - Chr8:48378904-48378923 MsG0880044728.01.T01:intron 15.0%
!! TAAAAATCATGTGTATAAAA+TGG - Chr8:48380262-48380281 MsG0880044728.01.T01:intron 15.0%
!! TCTATTAGAACATAAAATAT+TGG + Chr8:48379661-48379680 None:intergenic 15.0%
!!! AAAAAGATATTAATCCTTTT+TGG + Chr8:48378571-48378590 None:intergenic 15.0%
!!! AAAAGATATTAATCCTTTTT+GGG + Chr8:48378570-48378589 None:intergenic 15.0%
!!! AATTGTTTTTTTTTGTCTTT+TGG - Chr8:48380106-48380125 MsG0880044728.01.T01:CDS 15.0%
!!! TGTTGATAAAATAAAATATC+TGG + Chr8:48382143-48382162 None:intergenic 15.0%
!!! TTTTTCTTTTATTTTACCAT+TGG - Chr8:48380581-48380600 MsG0880044728.01.T01:intron 15.0%
!! AAAGAAGATAGAACAATTTA+AGG + Chr8:48379988-48380007 None:intergenic 20.0%
!! AAGAAGATAGAACAATTTAA+GGG + Chr8:48379987-48380006 None:intergenic 20.0%
!! ATAATTACATATAATGGTCA+TGG - Chr8:48377330-48377349 MsG0880044728.01.T01:three_prime_UTR 20.0%
!! CGTTAATGTTAAAAATTGTA+TGG - Chr8:48378903-48378922 MsG0880044728.01.T01:intron 20.0%
!! CTGCTAAAATTAATGAAATA+TGG - Chr8:48380436-48380455 MsG0880044728.01.T01:intron 20.0%
!! GGTTTAAAAAATAAGGAAAA+AGG + Chr8:48377901-48377920 None:intergenic 20.0%
!! GTTAACTACATTACAATATT+TGG + Chr8:48380237-48380256 None:intergenic 20.0%
!! TTAAAAAACCCAAAATGTAA+CGG - Chr8:48380991-48381010 MsG0880044728.01.T01:CDS 20.0%
!!! AAAAACAAAATGAGTAGTTT+TGG - Chr8:48377278-48377297 MsG0880044728.01.T01:three_prime_UTR 20.0%
!!! AAAGATATTAATCCTTTTTG+GGG + Chr8:48378569-48378588 None:intergenic 20.0%
!!! AAATTGTGTTTTGTACTTAT+AGG - Chr8:48382741-48382760 MsG0880044728.01.T01:intron 20.0%
!!! AATTATGAACACTTTTTTCT+AGG - Chr8:48377981-48378000 MsG0880044728.01.T01:CDS 20.0%
!!! CAAATTTTCCATTTTGAATT+TGG - Chr8:48382381-48382400 MsG0880044728.01.T01:intron 20.0%
!!! CATATTTCATTAATTTTAGC+AGG + Chr8:48380438-48380457 None:intergenic 20.0%
!!! TAACTTTAAAAAAAGGGATT+TGG - Chr8:48377353-48377372 MsG0880044728.01.T01:three_prime_UTR 20.0%
!!! TCATGGCTTAATTATAATTT+TGG + Chr8:48380914-48380933 None:intergenic 20.0%
!!! TCATGGTAACTTTAAAAAAA+GGG - Chr8:48377347-48377366 MsG0880044728.01.T01:three_prime_UTR 20.0%
!!! TTTTAAAAACAATTGATGGT+AGG + Chr8:48380463-48380482 None:intergenic 20.0%
! AAAATATCTGGTATTTACCA+AGG + Chr8:48382131-48382150 None:intergenic 25.0%
! AAATCACTTGGAAATAATAC+AGG + Chr8:48380411-48380430 None:intergenic 25.0%
! AAATGCATAAGTCATAAACA+TGG + Chr8:48381460-48381479 None:intergenic 25.0%
! AACACGAGGTTTAAAAAATA+AGG + Chr8:48377908-48377927 None:intergenic 25.0%
! AATAAATGAAAAGGGATGAA+AGG - Chr8:48380806-48380825 MsG0880044728.01.T01:intron 25.0%
! AATATGAATGGACAAATCAA+TGG - Chr8:48377424-48377443 MsG0880044728.01.T01:three_prime_UTR 25.0%
! AATCACTTGGAAATAATACA+GGG + Chr8:48380410-48380429 None:intergenic 25.0%
! AATTACTAAAAGGTGAAAGA+TGG + Chr8:48381340-48381359 None:intergenic 25.0%
! ACATTCAGATATTATTACCA+AGG - Chr8:48378852-48378871 MsG0880044728.01.T01:intron 25.0%
! ATAAATGAAAAGGGATGAAA+GGG - Chr8:48380807-48380826 MsG0880044728.01.T01:intron 25.0%
! ATCTTTAAATAGTCCTCAAT+TGG + Chr8:48379537-48379556 None:intergenic 25.0%
! CAAACCAGAATTCAAATATT+TGG + Chr8:48378411-48378430 None:intergenic 25.0%
! CATTCAGATATTATTACCAA+GGG - Chr8:48378853-48378872 MsG0880044728.01.T01:intron 25.0%
! CTGTAAACAACTAATAAACT+AGG + Chr8:48381517-48381536 None:intergenic 25.0%
! CTTACATATCCTAAAAGATA+TGG + Chr8:48382412-48382431 None:intergenic 25.0%
! GTAAGCAATATCAATATGAA+TGG - Chr8:48377412-48377431 MsG0880044728.01.T01:three_prime_UTR 25.0%
! GTTGTTAGAGAAAAATTTGT+TGG - Chr8:48377665-48377684 MsG0880044728.01.T01:three_prime_UTR 25.0%
! TAAACAACTAATAAACTAGG+CGG + Chr8:48381514-48381533 None:intergenic 25.0%
! TAAAGATTGCAAACAAATGA+AGG - Chr8:48379350-48379369 MsG0880044728.01.T01:intron 25.0%
! TACCAAATATAGCATATTTC+TGG + Chr8:48381850-48381869 None:intergenic 25.0%
! TAGAGTAGTTAAGATTTAGT+TGG + Chr8:48379633-48379652 None:intergenic 25.0%
! TAGTAAATTGTGTTTCGATA+TGG - Chr8:48381618-48381637 MsG0880044728.01.T01:intron 25.0%
! TATAATGTGCAACTAATACA+TGG - Chr8:48378712-48378731 MsG0880044728.01.T01:intron 25.0%
! TCAAAATGGAAAATTTGACT+TGG + Chr8:48382378-48382397 None:intergenic 25.0%
! TGAAGCTCAAAATTACTAAA+AGG + Chr8:48381350-48381369 None:intergenic 25.0%
! TGATCCAAGCTATTAAAAAT+TGG + Chr8:48378946-48378965 None:intergenic 25.0%
! TGGTAATTCCAAATTCAAAA+TGG + Chr8:48382392-48382411 None:intergenic 25.0%
! TTCAGCACTTAAATATCTTT+CGG + Chr8:48379195-48379214 None:intergenic 25.0%
! TTCCAGAAATATGCTATATT+TGG - Chr8:48381845-48381864 MsG0880044728.01.T01:intron 25.0%
! TTGATGAACATATCAACTAT+TGG + Chr8:48377520-48377539 None:intergenic 25.0%
! TTTAACCTCATAACAAAACA+AGG + Chr8:48379711-48379730 None:intergenic 25.0%
!! GTCATGGTAACTTTAAAAAA+AGG - Chr8:48377346-48377365 MsG0880044728.01.T01:three_prime_UTR 25.0%
!! TAATCCTTTTTGCAAATGAT+AGG + Chr8:48378672-48378691 None:intergenic 25.0%
!! TCATTTATCCGTTACATTTT+GGG + Chr8:48381002-48381021 None:intergenic 25.0%
!! TTGGAATTACCATATCTTTT+AGG - Chr8:48382400-48382419 MsG0880044728.01.T01:intron 25.0%
!!! AATAATTTGTTGAATCAGCA+TGG + Chr8:48378184-48378203 None:intergenic 25.0%
!!! AGACAGAATCTTTAGAATAA+TGG - Chr8:48379305-48379324 MsG0880044728.01.T01:intron 25.0%
!!! AGTAAGTTGATAAGTTTGTT+AGG + Chr8:48379598-48379617 None:intergenic 25.0%
!!! ATGACTTATGCATTTTGATT+TGG - Chr8:48381465-48381484 MsG0880044728.01.T01:intron 25.0%
!!! ATTAGGGTTTTAAGAACTTT+GGG - Chr8:48380734-48380753 MsG0880044728.01.T01:intron 25.0%
!!! ATTGAAAGAGTTGATACAAA+AGG - Chr8:48379398-48379417 MsG0880044728.01.T01:intron 25.0%
!!! TATTAGGGTTTTAAGAACTT+TGG - Chr8:48380733-48380752 MsG0880044728.01.T01:intron 25.0%
AAAATCAATGCTATTGTACG+AGG + Chr8:48378825-48378844 None:intergenic 30.0%
AAACAACTAATAAACTAGGC+GGG + Chr8:48381513-48381532 None:intergenic 30.0%
AAATATTTGGGTCTCAATGA+TGG - Chr8:48380480-48380499 MsG0880044728.01.T01:intron 30.0%
AAGTAACGAATACTTCTCTA+GGG - Chr8:48382889-48382908 MsG0880044728.01.T01:CDS 30.0%
AATACTTGAGTACGAATTTC+TGG + Chr8:48379908-48379927 None:intergenic 30.0%
AATAGAAATCCCAACTATGT+TGG - Chr8:48378630-48378649 MsG0880044728.01.T01:intron 30.0%
AATATTAATCCTCGAGTAAC+AGG + Chr8:48378023-48378042 None:intergenic 30.0%
ACATGTTCAAAAGAATCATC+TGG + Chr8:48378212-48378231 None:intergenic 30.0%
ACTAGGTTTGAAGACAAAAT+GGG - Chr8:48380015-48380034 MsG0880044728.01.T01:intron 30.0%
AGAAATTCGTACTCAAGTAT+TGG - Chr8:48379907-48379926 MsG0880044728.01.T01:intron 30.0%
AGTTTCGATAGAATTTCGAA+AGG - Chr8:48382948-48382967 MsG0880044728.01.T01:CDS 30.0%
ATAAATTTGATGCATCGAGA+AGG + Chr8:48381974-48381993 None:intergenic 30.0%
ATAGACATAAAGCAAACTAC+AGG + Chr8:48379253-48379272 None:intergenic 30.0%
ATGGCCAAATATTTGAATTC+TGG - Chr8:48378404-48378423 MsG0880044728.01.T01:intron 30.0%
CATATACTTGATCTTATTGC+AGG - Chr8:48379934-48379953 MsG0880044728.01.T01:intron 30.0%
CATTAATCGTTTGCATATTG+AGG - Chr8:48379147-48379166 MsG0880044728.01.T01:intron 30.0%
CCATTAAGTTTAAATTCACC+AGG + Chr8:48378764-48378783 None:intergenic 30.0%
CCTGGTGAATTTAAACTTAA+TGG - Chr8:48378761-48378780 MsG0880044728.01.T01:intron 30.0%
CTAGAGAATTATAGTGTGAA+AGG + Chr8:48379477-48379496 None:intergenic 30.0%
CTGCAATAAGATCAAGTATA+TGG + Chr8:48379936-48379955 None:intergenic 30.0%
CTTTGTGATGTTAACAAGTA+TGG + Chr8:48378240-48378259 None:intergenic 30.0%
GCAAACAAATGAAGGATTAT+TGG - Chr8:48379358-48379377 MsG0880044728.01.T01:intron 30.0%
GGTTAATTGCAAACTTGAAA+TGG + Chr8:48381199-48381218 None:intergenic 30.0%
GTTTAAATTTCCATTGCCAA+AGG + Chr8:48381764-48381783 None:intergenic 30.0%
GTTTCGATAGAATTTCGAAA+GGG - Chr8:48382949-48382968 MsG0880044728.01.T01:CDS 30.0%
TAAATAGTCCTCAATTGGTA+GGG + Chr8:48379532-48379551 None:intergenic 30.0%
TAAGAACTCTAGTGTTGTAA+TGG - Chr8:48382347-48382366 MsG0880044728.01.T01:intron 30.0%
TACTAGGTTTGAAGACAAAA+TGG - Chr8:48380014-48380033 MsG0880044728.01.T01:intron 30.0%
TAGAAAAGCAACAGAAAGAT+GGG + Chr8:48382194-48382213 None:intergenic 30.0%
TATATGTTATGAAGCTTGTG+AGG - Chr8:48377759-48377778 MsG0880044728.01.T01:CDS 30.0%
TATCTTCTTTGCTACATACT+AGG - Chr8:48379998-48380017 MsG0880044728.01.T01:intron 30.0%
TATTGCGTGATATCAACTAT+TGG + Chr8:48377497-48377516 None:intergenic 30.0%
TCAGCACTTAAATATCTTTC+GGG + Chr8:48379194-48379213 None:intergenic 30.0%
TCGTGGTATAATTACACATT+TGG - Chr8:48380352-48380371 MsG0880044728.01.T01:intron 30.0%
TCTGTCTATTGATGTTGAAA+TGG - Chr8:48381381-48381400 MsG0880044728.01.T01:intron 30.0%
TGTAGAGAAACATATAGCTT+GGG - Chr8:48378073-48378092 MsG0880044728.01.T01:intron 30.0%
TTAAATAGTCCTCAATTGGT+AGG + Chr8:48379533-48379552 None:intergenic 30.0%
TTACAACACTAGAGTTCTTA+TGG + Chr8:48382347-48382366 None:intergenic 30.0%
TTAGAAAAGCAACAGAAAGA+TGG + Chr8:48382195-48382214 None:intergenic 30.0%
TTCAAATATTTGGCCATACT+AGG + Chr8:48378401-48378420 None:intergenic 30.0%
TTCGCAAAATTCAAATCTTG+CGG - Chr8:48377053-48377072 MsG0880044728.01.T01:three_prime_UTR 30.0%
TTGTAGAGAAACATATAGCT+TGG - Chr8:48378072-48378091 MsG0880044728.01.T01:intron 30.0%
TTTCGATAGAATTTCGAAAG+GGG - Chr8:48382950-48382969 MsG0880044728.01.T01:CDS 30.0%
! ACTATTGTTTCGGTGTATAA+TGG + Chr8:48380063-48380082 None:intergenic 30.0%
! AGGACCAATTTTTAATAGCT+TGG - Chr8:48378939-48378958 MsG0880044728.01.T01:intron 30.0%
! CAAGATTTGAATTTTGCGAA+AGG + Chr8:48377053-48377072 None:intergenic 30.0%
! CTCATTTATCCGTTACATTT+TGG + Chr8:48381003-48381022 None:intergenic 30.0%
! GATGATTCTTTTGAACATGT+CGG - Chr8:48378212-48378231 MsG0880044728.01.T01:intron 30.0%
! GTCAATTAAGCATTCTCTTT+TGG - Chr8:48377704-48377723 MsG0880044728.01.T01:three_prime_UTR 30.0%
! GTTTTTCCCAATTGAATTGA+AGG + Chr8:48377264-48377283 None:intergenic 30.0%
! TGTCTATCTGTGATTTTCAT+AGG - Chr8:48379266-48379285 MsG0880044728.01.T01:intron 30.0%
! TTCAGTTTATAGAGTTGGTT+GGG + Chr8:48381287-48381306 None:intergenic 30.0%
! TTTCAGTTTATAGAGTTGGT+TGG + Chr8:48381288-48381307 None:intergenic 30.0%
! TTTTAGTATCTGAGTTTCTC+TGG - Chr8:48379060-48379079 MsG0880044728.01.T01:intron 30.0%
! TTTTTGATCCAGTTGGTTAA+CGG - Chr8:48382244-48382263 MsG0880044728.01.T01:CDS 30.0%
!! AACTGGAAATTAGTTCTAGT+GGG - Chr8:48381232-48381251 MsG0880044728.01.T01:intron 30.0%
!! AAGTTGATAAGTTTGTTAGG+TGG + Chr8:48379595-48379614 None:intergenic 30.0%
!! AATGTAACGGATAAATGAGA+AGG - Chr8:48381004-48381023 MsG0880044728.01.T01:CDS 30.0%
!! TGTGGCTTTATGTTAATTAC+TGG - Chr8:48378796-48378815 MsG0880044728.01.T01:intron 30.0%
!!! AAGTGGTTACTTTTTTCCTT+TGG - Chr8:48381745-48381764 MsG0880044728.01.T01:CDS 30.0%
!!! ATGCATTTTGATTTGGTCTA+TGG - Chr8:48381472-48381491 MsG0880044728.01.T01:intron 30.0%
!!! CTCTATTTTTTTGATCCAGT+TGG - Chr8:48382237-48382256 MsG0880044728.01.T01:CDS 30.0%
!!! TTACTTTTTTCCTTTGGCAA+TGG - Chr8:48381751-48381770 MsG0880044728.01.T01:CDS 30.0%
!!! TTTGTCCTTGTTTTGTTATG+AGG - Chr8:48379703-48379722 MsG0880044728.01.T01:intron 30.0%
AAAACAAGGACAAACCCAAA+TGG + Chr8:48379697-48379716 None:intergenic 35.0%
AAACTACAGGCATTATCAAG+TGG + Chr8:48379240-48379259 None:intergenic 35.0%
AAATAGTCCTCAATTGGTAG+GGG + Chr8:48379531-48379550 None:intergenic 35.0%
AAATGAGCAATTCACTGCAA+AGG + Chr8:48377566-48377585 None:intergenic 35.0%
AAATGATAGGTGGCAGAAAA+GGG + Chr8:48378659-48378678 None:intergenic 35.0%
AACAACTAATAAACTAGGCG+GGG + Chr8:48381512-48381531 None:intergenic 35.0%
AACAGCTCATTGAGAAAGAA+AGG - Chr8:48378335-48378354 MsG0880044728.01.T01:intron 35.0%
AAGACAAAAATGCCATAGGT+CGG - Chr8:48382690-48382709 MsG0880044728.01.T01:intron 35.0%
AAGGACAATTAAATGAGTCG+TGG - Chr8:48380335-48380354 MsG0880044728.01.T01:intron 35.0%
ACAGCTCATTGAGAAAGAAA+GGG - Chr8:48378336-48378355 MsG0880044728.01.T01:intron 35.0%
ACATACTCAAATGAACACAC+AGG - Chr8:48380617-48380636 MsG0880044728.01.T01:intron 35.0%
ACCGTTCCTTCAATTCAATT+GGG - Chr8:48377255-48377274 MsG0880044728.01.T01:three_prime_UTR 35.0%
ACTAAAAGGTGAAAGATGGT+GGG + Chr8:48381336-48381355 None:intergenic 35.0%
ACTCTATAGTTCGATAACCT+TGG - Chr8:48381715-48381734 MsG0880044728.01.T01:CDS 35.0%
ACTGTTGTGATATTGCTATC+AGG - Chr8:48378980-48378999 MsG0880044728.01.T01:intron 35.0%
ACTTAAATATCTTTCGGGCA+CGG + Chr8:48379189-48379208 None:intergenic 35.0%
AGAAAAGCAACAGAAAGATG+GGG + Chr8:48382193-48382212 None:intergenic 35.0%
AGAAATCATCGGAAAGAAGA+TGG + Chr8:48382583-48382602 None:intergenic 35.0%
AGATGATAACCTTGCATACA+AGG - Chr8:48379431-48379450 MsG0880044728.01.T01:intron 35.0%
ATTACATTGAAGTGCAGTGT+AGG - Chr8:48382831-48382850 MsG0880044728.01.T01:CDS 35.0%
ATTATCTCCCATGTCCATTT+GGG - Chr8:48379680-48379699 MsG0880044728.01.T01:intron 35.0%
ATTATTGGTGTAGCACTGTA+AGG - Chr8:48379373-48379392 MsG0880044728.01.T01:intron 35.0%
ATTCTGTCTTGCTCAAAGAA+AGG + Chr8:48379294-48379313 None:intergenic 35.0%
CAAAGTTACAGCAAACATGA+GGG - Chr8:48380887-48380906 MsG0880044728.01.T01:intron 35.0%
CATACTCAAATGAACACACA+GGG - Chr8:48380618-48380637 MsG0880044728.01.T01:intron 35.0%
CATTGTTGCTAAACTTAGGA+GGG - Chr8:48382548-48382567 MsG0880044728.01.T01:intron 35.0%
CTAGAAGAAGAAAAACCTCT+CGG + Chr8:48383018-48383037 None:intergenic 35.0%
CTATCGAAACTTTCAAAACC+AGG + Chr8:48382939-48382958 None:intergenic 35.0%
CTCTATAGTTCGATAACCTT+GGG - Chr8:48381716-48381735 MsG0880044728.01.T01:CDS 35.0%
GAAATCATCGGAAAGAAGAT+GGG + Chr8:48382582-48382601 None:intergenic 35.0%
GAAGTAACGAATACTTCTCT+AGG - Chr8:48382888-48382907 MsG0880044728.01.T01:CDS 35.0%
GAGCTTTCAGTTTATAGAGT+TGG + Chr8:48381292-48381311 None:intergenic 35.0%
GTGTTCATTTGAGTATGTGT+TGG + Chr8:48380615-48380634 None:intergenic 35.0%
GTTCCTCTAATATGTGCTTA+TGG - Chr8:48380037-48380056 MsG0880044728.01.T01:intron 35.0%
TACTAAAAGGTGAAAGATGG+TGG + Chr8:48381337-48381356 None:intergenic 35.0%
TCCCAATTGAATTGAAGGAA+CGG + Chr8:48377259-48377278 None:intergenic 35.0%
TCTGAGAGAGACTATTGTTT+CGG + Chr8:48380073-48380092 None:intergenic 35.0%
TGCAAACGATTAATGCTTTG+AGG + Chr8:48379142-48379161 None:intergenic 35.0%
TGGAAATTTAAACCTCAGTC+TGG - Chr8:48381771-48381790 MsG0880044728.01.T01:CDS 35.0%
TGTCTATGCTTGGAGAATAT+GGG + Chr8:48381144-48381163 None:intergenic 35.0%
TTAGCAGGACTAAAATCACT+TGG + Chr8:48380423-48380442 None:intergenic 35.0%
TTGTCAGATTTCCTTGTTGA+TGG - Chr8:48378513-48378532 MsG0880044728.01.T01:intron 35.0%
TTGTCTATGCTTGGAGAATA+TGG + Chr8:48381145-48381164 None:intergenic 35.0%
TTTGTGACTTTGTCTATGCT+TGG + Chr8:48381154-48381173 None:intergenic 35.0%
! AAAAAAATGCCGCTTGAACT+TGG - Chr8:48379845-48379864 MsG0880044728.01.T01:intron 35.0%
! AAAAAATGCCGCTTGAACTT+GGG - Chr8:48379846-48379865 MsG0880044728.01.T01:intron 35.0%
! AGACTAATGTCTACTGATTG+TGG - Chr8:48377931-48377950 MsG0880044728.01.T01:CDS 35.0%
! CAGTGAATTGCTCATTTTAG+AGG - Chr8:48377569-48377588 MsG0880044728.01.T01:three_prime_UTR 35.0%
! CGAATTTCTGGATCATTAAC+AGG + Chr8:48379896-48379915 None:intergenic 35.0%
! GTATCTTCGTTCATGTTTTC+TGG + Chr8:48381177-48381196 None:intergenic 35.0%
! GTTTGTTAGGTGGTTGTTAA+CGG + Chr8:48379585-48379604 None:intergenic 35.0%
! TCCTTTTTGCAAATGATAGG+TGG + Chr8:48378669-48378688 None:intergenic 35.0%
! TGACATTTTATGTGGAATCC+CGG + Chr8:48380674-48380693 None:intergenic 35.0%
! TTTTACGCAGATCTACAATG+AGG - Chr8:48379814-48379833 MsG0880044728.01.T01:intron 35.0%
!! ACAACTAGCTTTGAAAGTAG+TGG - Chr8:48378470-48378489 MsG0880044728.01.T01:intron 35.0%
!! GAACTGGAAATTAGTTCTAG+TGG - Chr8:48381231-48381250 MsG0880044728.01.T01:intron 35.0%
!! GAATACTTCTCTAGGGTATT+TGG - Chr8:48382896-48382915 MsG0880044728.01.T01:CDS 35.0%
!! GAGACTTGTTGAAACAACAA+TGG - Chr8:48377092-48377111 MsG0880044728.01.T01:three_prime_UTR 35.0%
!! TAATGGATTTGCTTGAGTTG+TGG - Chr8:48378778-48378797 MsG0880044728.01.T01:intron 35.0%
!! TATCGACTTGAGATTGGATT+AGG - Chr8:48381892-48381911 MsG0880044728.01.T01:intron 35.0%
!! TTATTTTACCATTGGCCTAG+TGG - Chr8:48380589-48380608 MsG0880044728.01.T01:intron 35.0%
!! TTGCTTTATCGACTTGAGAT+TGG - Chr8:48381886-48381905 MsG0880044728.01.T01:intron 35.0%
!! TTGTCAGATTGATGATGAGA+AGG - Chr8:48377727-48377746 MsG0880044728.01.T01:exon 35.0%
!!! GGTATTTGGTGTTGTTTTGT+CGG - Chr8:48382910-48382929 MsG0880044728.01.T01:CDS 35.0%
!!! GTATTTGGTGTTGTTTTGTC+GGG - Chr8:48382911-48382930 MsG0880044728.01.T01:CDS 35.0%
!!! GTTGTTAACGGTTGCTATTT+TGG + Chr8:48379573-48379592 None:intergenic 35.0%
!!! GTTTTTGGAGTTGATGATGA+GGG - Chr8:48376979-48376998 MsG0880044728.01.T01:three_prime_UTR 35.0%
!!! TCGTTTGCTTGTTATGCTTT+TGG - Chr8:48377146-48377165 MsG0880044728.01.T01:three_prime_UTR 35.0%
!!! TGTTTTTGGAGTTGATGATG+AGG - Chr8:48376978-48376997 MsG0880044728.01.T01:three_prime_UTR 35.0%
!!! TTTTGATTTGGTCTATGGTC+TGG - Chr8:48381477-48381496 MsG0880044728.01.T01:intron 35.0%
AACAGAAAGATGGGGATTGT+GGG + Chr8:48382185-48382204 None:intergenic 40.0%
AATCTCACTCAACTTGATGC+TGG - Chr8:48377171-48377190 MsG0880044728.01.T01:three_prime_UTR 40.0%
AATGATAGGTGGCAGAAAAG+GGG + Chr8:48378658-48378677 None:intergenic 40.0%
ACAGGCAATGGAGAAATCAT+CGG + Chr8:48382594-48382613 None:intergenic 40.0%
ACTCCGTTTCAGTATCTCAT+AGG - Chr8:48382621-48382640 MsG0880044728.01.T01:intron 40.0%
AGATACTGAAACGGAGTCTT+TGG + Chr8:48382618-48382637 None:intergenic 40.0%
AGGCATTATCAAGTGGAAAG+TGG + Chr8:48379233-48379252 None:intergenic 40.0%
AGTGACATGAGACATGAAAC+AGG + Chr8:48379777-48379796 None:intergenic 40.0%
ATGACATACCATCCTTCTCA+TGG + Chr8:48377802-48377821 None:intergenic 40.0%
ATTAAGCCATGAGTCTTCAG+CGG - Chr8:48380922-48380941 MsG0880044728.01.T01:intron 40.0%
ATTCTGAGCTCTTTGCGAAT+AGG - Chr8:48382777-48382796 MsG0880044728.01.T01:intron 40.0%
CAAATGATAGGTGGCAGAAA+AGG + Chr8:48378660-48378679 None:intergenic 40.0%
CACGAAGACAAAAATGCCAT+AGG - Chr8:48382686-48382705 MsG0880044728.01.T01:intron 40.0%
CAGCTCATTGAGAAAGAAAG+GGG - Chr8:48378337-48378356 MsG0880044728.01.T01:intron 40.0%
CCAAAGTTACAGCAAACATG+AGG - Chr8:48380886-48380905 MsG0880044728.01.T01:intron 40.0%
CCACCTATGAGATACTGAAA+CGG + Chr8:48382627-48382646 None:intergenic 40.0%
CCATTGTTGCTAAACTTAGG+AGG - Chr8:48382547-48382566 MsG0880044728.01.T01:intron 40.0%
CCTAAGTTTAGCAACAATGG+AGG + Chr8:48382547-48382566 None:intergenic 40.0%
CCTCCATTGTTGCTAAACTT+AGG - Chr8:48382544-48382563 MsG0880044728.01.T01:intron 40.0%
CCTCCTAAGTTTAGCAACAA+TGG + Chr8:48382550-48382569 None:intergenic 40.0%
CTAGGAAACTGAAAGCAGTT+AGG + Chr8:48378383-48378402 None:intergenic 40.0%
CTGCACTTCAATGTAATCAG+TGG + Chr8:48382828-48382847 None:intergenic 40.0%
CTGCTTTCAGTTTCCTAGTA+TGG - Chr8:48378385-48378404 MsG0880044728.01.T01:intron 40.0%
CTTGACTCTTGACTCTTGTT+TGG - Chr8:48378736-48378755 MsG0880044728.01.T01:intron 40.0%
CTTGGCTAAGTCAAACATTG+TGG - Chr8:48378543-48378562 MsG0880044728.01.T01:intron 40.0%
GACCGTTCCTTCAATTCAAT+TGG - Chr8:48377254-48377273 MsG0880044728.01.T01:three_prime_UTR 40.0%
GAGGAAGATCCAAAAGTGAT+GGG - Chr8:48382085-48382104 MsG0880044728.01.T01:intron 40.0%
GATTATCTCCCATGTCCATT+TGG - Chr8:48379679-48379698 MsG0880044728.01.T01:intron 40.0%
GCAAAATTCAAATCTTGCGG+AGG - Chr8:48377056-48377075 MsG0880044728.01.T01:three_prime_UTR 40.0%
GCCACCTATCATTTGCAAAA+AGG - Chr8:48378665-48378684 MsG0880044728.01.T01:intron 40.0%
GGAGTTTATAACCTTGTTGC+TGG + Chr8:48379108-48379127 None:intergenic 40.0%
TATCTTTCCCCTACCAATTG+AGG - Chr8:48379521-48379540 MsG0880044728.01.T01:intron 40.0%
TGACATACCATCCTTCTCAT+GGG + Chr8:48377801-48377820 None:intergenic 40.0%
TGAGGAAGATCCAAAAGTGA+TGG - Chr8:48382084-48382103 MsG0880044728.01.T01:intron 40.0%
TGATATTGCTATCAGGTCTC+TGG - Chr8:48378987-48379006 MsG0880044728.01.T01:intron 40.0%
TGGCCATAAGCACATATTAG+AGG + Chr8:48380043-48380062 None:intergenic 40.0%
TGTTAACATCACAAAGCAGC+AGG - Chr8:48378244-48378263 MsG0880044728.01.T01:intron 40.0%
TTCCAGTTCATCAGTCTGTT+GGG + Chr8:48381220-48381239 None:intergenic 40.0%
TTTCCAGTTCATCAGTCTGT+TGG + Chr8:48381221-48381240 None:intergenic 40.0%
! AATTTCGAAAGGGGTGTATG+AGG - Chr8:48382959-48382978 MsG0880044728.01.T01:CDS 40.0%
! AGAGCCTTTTGGTCTGTAAA+TGG - Chr8:48382031-48382050 MsG0880044728.01.T01:intron 40.0%
! ATAAAAGCACACCTGAAGCA+AGG + Chr8:48377205-48377224 None:intergenic 40.0%
! CTCAGTCTGGCTTGATTAAA+CGG - Chr8:48381784-48381803 MsG0880044728.01.T01:CDS 40.0%
! GACATTAGTCTATGAACACG+AGG + Chr8:48377922-48377941 None:intergenic 40.0%
! GACATTTTATGTGGAATCCC+GGG + Chr8:48380673-48380692 None:intergenic 40.0%
! GAGCCTTTTGGTCTGTAAAT+GGG - Chr8:48382032-48382051 MsG0880044728.01.T01:intron 40.0%
! GGCTGTGATGACATTTTATG+TGG + Chr8:48380682-48380701 None:intergenic 40.0%
! GTTGTTTCAGGAAGTTTCTG+AGG - Chr8:48377005-48377024 MsG0880044728.01.T01:three_prime_UTR 40.0%
! TGGATTAGGAGAGCGAAATT+TGG - Chr8:48381906-48381925 MsG0880044728.01.T01:intron 40.0%
! TGTATGGGCTAAACTTACTG+AGG - Chr8:48378919-48378938 MsG0880044728.01.T01:intron 40.0%
! TGTTTGACTTAGCCAAGCAT+CGG + Chr8:48378540-48378559 None:intergenic 40.0%
!! CCTCATGTTTGCTGTAACTT+TGG + Chr8:48380889-48380908 None:intergenic 40.0%
!! TAACCGACTTGGACTATTCT+AGG + Chr8:48382058-48382077 None:intergenic 40.0%
!! TGCTTTGAGGTCAGAAAAAG+TGG + Chr8:48379129-48379148 None:intergenic 40.0%
AAACATAAGCCTCAGCTGTG+TGG - Chr8:48381041-48381060 MsG0880044728.01.T01:intron 45.0%
AAACCACTAGGCTGTAACAG+TGG - Chr8:48380702-48380721 MsG0880044728.01.T01:intron 45.0%
AAACGAGTGACACAACACTG+AGG + Chr8:48377132-48377151 None:intergenic 45.0%
AACATACCACGAGATCCAAC+AGG + Chr8:48377957-48377976 None:intergenic 45.0%
AACCACTAGGCTGTAACAGT+GGG - Chr8:48380703-48380722 MsG0880044728.01.T01:intron 45.0%
AACCCAACAGACTGATGAAC+TGG - Chr8:48381215-48381234 MsG0880044728.01.T01:intron 45.0%
ACAGAAAGATGGGGATTGTG+GGG + Chr8:48382184-48382203 None:intergenic 45.0%
ACATTGAAGTGCAGTGTAGG+CGG - Chr8:48382834-48382853 MsG0880044728.01.T01:CDS 45.0%
ACTCAAATGAACACACAGGG+AGG - Chr8:48380621-48380640 MsG0880044728.01.T01:intron 45.0%
ACTGTTACAGCCTAGTGGTT+TGG + Chr8:48380703-48380722 None:intergenic 45.0%
ACTTTCTGCAAATTGCGTGC+TGG - Chr8:48381942-48381961 MsG0880044728.01.T01:intron 45.0%
AGCATTTACCACTCACTCTG+CGG + Chr8:48382475-48382494 None:intergenic 45.0%
AGCTTCTACTCGACCCAAAA+CGG - Chr8:48378276-48378295 MsG0880044728.01.T01:intron 45.0%
AGGACAAACCCAAATGGACA+TGG + Chr8:48379691-48379710 None:intergenic 45.0%
AGGCCCATTTACAGACCAAA+AGG + Chr8:48382038-48382057 None:intergenic 45.0%
AGTTCGATAACCTTGGGTGT+TGG - Chr8:48381722-48381741 MsG0880044728.01.T01:CDS 45.0%
CAAACATTGTGGCCCCAAAA+AGG - Chr8:48378554-48378573 MsG0880044728.01.T01:intron 45.0%
CAACAGAAAGATGGGGATTG+TGG + Chr8:48382186-48382205 None:intergenic 45.0%
CCGTTTCAGTATCTCATAGG+TGG - Chr8:48382624-48382643 MsG0880044728.01.T01:intron 45.0%
CGTTTAATCAAGCCAGACTG+AGG + Chr8:48381786-48381805 None:intergenic 45.0%
CTCAAATGAACACACAGGGA+GGG - Chr8:48380622-48380641 MsG0880044728.01.T01:intron 45.0%
GCTTAATTGACCGCAAGCAA+GGG + Chr8:48377695-48377714 None:intergenic 45.0%
GGACAAACCCAAATGGACAT+GGG + Chr8:48379690-48379709 None:intergenic 45.0%
GGCTTATGTTTCGTGCACTT+CGG + Chr8:48381032-48381051 None:intergenic 45.0%
GTATGAGCAACTAGGATCCT+TGG - Chr8:48382111-48382130 MsG0880044728.01.T01:intron 45.0%
TAACTACTCTGTCGTCTCAG+TGG + Chr8:48382290-48382309 None:intergenic 45.0%
TACGCAGATCTACAATGAGG+AGG - Chr8:48379817-48379836 MsG0880044728.01.T01:intron 45.0%
TCAAATGAACACACAGGGAG+GGG - Chr8:48380623-48380642 MsG0880044728.01.T01:intron 45.0%
TCACCTAGAATCAGAGCTCA+AGG - Chr8:48380316-48380335 MsG0880044728.01.T01:intron 45.0%
TGCTTAATTGACCGCAAGCA+AGG + Chr8:48377696-48377715 None:intergenic 45.0%
TTCAAATCTTGCGGAGGAGA+TGG - Chr8:48377062-48377081 MsG0880044728.01.T01:three_prime_UTR 45.0%
TTGGGATTGTTCACCTCGTT+GGG + Chr8:48381269-48381288 None:intergenic 45.0%
TTGTAGAACCACCCATGAGA+AGG - Chr8:48377787-48377806 MsG0880044728.01.T01:intron 45.0%
! AACAGTGGGGGTGTGATATT+AGG - Chr8:48380717-48380736 MsG0880044728.01.T01:intron 45.0%
! ACAGTGGGGGTGTGATATTA+GGG - Chr8:48380718-48380737 MsG0880044728.01.T01:intron 45.0%
! ATAACCTTGTTGCTGGCTAC+CGG + Chr8:48379101-48379120 None:intergenic 45.0%
! CTTGACTCTTGTTTGGTTCC+TGG - Chr8:48378743-48378762 MsG0880044728.01.T01:intron 45.0%
! GTTTCAAGAGACCCCGTTTT+GGG + Chr8:48378292-48378311 None:intergenic 45.0%
! TCATACGCTCCCATCACTTT+TGG + Chr8:48382097-48382116 None:intergenic 45.0%
! TGTCCTTGAGCTCTGATTCT+AGG + Chr8:48380322-48380341 None:intergenic 45.0%
! TGTTTCAAGAGACCCCGTTT+TGG + Chr8:48378293-48378312 None:intergenic 45.0%
! TTGAGTATGTGTTGGCCACT+AGG + Chr8:48380607-48380626 None:intergenic 45.0%
!! AAAAGGGGTGCCAACATAGT+TGG + Chr8:48378643-48378662 None:intergenic 45.0%
!! AAAGGGGTGCCAACATAGTT+GGG + Chr8:48378642-48378661 None:intergenic 45.0%
!! AACTGCCATTGTTTTGCAGG+AGG - Chr8:48382000-48382019 MsG0880044728.01.T01:intron 45.0%
!! ATAACCTTGGGTGTTGGAAG+TGG - Chr8:48381728-48381747 MsG0880044728.01.T01:CDS 45.0%
!! ATTGATGATGAGAAGGTGCG+TGG - Chr8:48377734-48377753 MsG0880044728.01.T01:exon 45.0%
!! GTGAACTGCCATTGTTTTGC+AGG - Chr8:48381997-48382016 MsG0880044728.01.T01:intron 45.0%
!! TGAAAGGAGAGTGCTCCATT+GGG + Chr8:48379461-48379480 None:intergenic 45.0%
!! TGGTACTGATTCCTTGCTTC+AGG - Chr8:48377191-48377210 MsG0880044728.01.T01:three_prime_UTR 45.0%
!!! CAGTTTTCAAGTCCGACCTA+TGG + Chr8:48382705-48382724 None:intergenic 45.0%
!!! TGTTGGTTTTCCCTTGCTTG+CGG - Chr8:48377682-48377701 MsG0880044728.01.T01:three_prime_UTR 45.0%
!! TTTAATTAAATAAATGAAAA+GGG - Chr8:48380798-48380817 MsG0880044728.01.T01:intron 5.0%
!!! TTTTAATTAAATAAATGAAA+AGG - Chr8:48380797-48380816 MsG0880044728.01.T01:intron 5.0%
AACATCACAAAGCAGCAGGC+AGG - Chr8:48378248-48378267 MsG0880044728.01.T01:intron 50.0%
ACATCACAAAGCAGCAGGCA+GGG - Chr8:48378249-48378268 MsG0880044728.01.T01:intron 50.0%
ACCAAGGGCTAAGCTTACAG+TGG - Chr8:48378868-48378887 MsG0880044728.01.T01:intron 50.0%
ACCACTAGGCTGTAACAGTG+GGG - Chr8:48380704-48380723 MsG0880044728.01.T01:intron 50.0%
ACCACTGTAAGCTTAGCCCT+TGG + Chr8:48378872-48378891 None:intergenic 50.0%
ACCATTCCGCTGAAGACTCA+TGG + Chr8:48380931-48380950 None:intergenic 50.0%
ACCTGCCTCCTGCAAAACAA+TGG + Chr8:48382008-48382027 None:intergenic 50.0%
AGAACCACCCATGAGAAGGA+TGG - Chr8:48377791-48377810 MsG0880044728.01.T01:intron 50.0%
AGTGCAGTCCCAAGTTCAAG+CGG + Chr8:48379857-48379876 None:intergenic 50.0%
ATCCAGTTGGTTAACGGCAG+CGG - Chr8:48382250-48382269 MsG0880044728.01.T01:CDS 50.0%
ATGGGTTCACGTTGCAGTTG+GGG + Chr8:48381097-48381116 None:intergenic 50.0%
ATGTCCACCTCCTTTGCAGA+TGG + Chr8:48381116-48381135 None:intergenic 50.0%
CAAATGAACACACAGGGAGG+GGG - Chr8:48380624-48380643 MsG0880044728.01.T01:intron 50.0%
CAACGTGAACCCATCTGCAA+AGG - Chr8:48381103-48381122 MsG0880044728.01.T01:intron 50.0%
CAGAAAGATGGGGATTGTGG+GGG + Chr8:48382183-48382202 None:intergenic 50.0%
CATACCATCCTTCTCATGGG+TGG + Chr8:48377798-48377817 None:intergenic 50.0%
CATCGGAAAGAAGATGGGTG+AGG + Chr8:48382577-48382596 None:intergenic 50.0%
CCAAGTCGGTTACGAAGATG+AGG - Chr8:48382066-48382085 MsG0880044728.01.T01:intron 50.0%
CCTCATCTTCGTAACCGACT+TGG + Chr8:48382069-48382088 None:intergenic 50.0%
CGCACATGGCTCAAACTACA+GGG + Chr8:48380379-48380398 None:intergenic 50.0%
CTGGCCTGCATTACTTCTTC+CGG - Chr8:48379079-48379098 MsG0880044728.01.T01:intron 50.0%
CTTCTACTCGACCCAAAACG+GGG - Chr8:48378278-48378297 MsG0880044728.01.T01:intron 50.0%
GCTACCGGAAGAAGTAATGC+AGG + Chr8:48379086-48379105 None:intergenic 50.0%
GCTTCTACTCGACCCAAAAC+GGG - Chr8:48378277-48378296 MsG0880044728.01.T01:intron 50.0%
GGGCCTAGAATAGTCCAAGT+CGG - Chr8:48382052-48382071 MsG0880044728.01.T01:intron 50.0%
GGGTGTATGAGGAGTTGAGA+GGG - Chr8:48382970-48382989 MsG0880044728.01.T01:CDS 50.0%
GTAACCACTTCCAACACCCA+AGG + Chr8:48381735-48381754 None:intergenic 50.0%
GTCATCACAGCCAAACCACT+AGG - Chr8:48380690-48380709 MsG0880044728.01.T01:intron 50.0%
GTTGAGAGGGAGTGGAATGT+TGG - Chr8:48382983-48383002 MsG0880044728.01.T01:CDS 50.0%
GTTGGGATTGTTCACCTCGT+TGG + Chr8:48381270-48381289 None:intergenic 50.0%
GTTTGAGCCATGTGCGACTT+TGG - Chr8:48380383-48380402 MsG0880044728.01.T01:intron 50.0%
TAACAGGTGCCTCATCTGCT+CGG + Chr8:48378007-48378026 None:intergenic 50.0%
TACTCTGTCGTCTCAGTGGA+TGG + Chr8:48382286-48382305 None:intergenic 50.0%
TATACACACCGCAGAGTGAG+TGG - Chr8:48382464-48382483 MsG0880044728.01.T01:intron 50.0%
TATGAGGAGTTGAGAGGGAG+TGG - Chr8:48382975-48382994 MsG0880044728.01.T01:CDS 50.0%
TCGCACATGGCTCAAACTAC+AGG + Chr8:48380380-48380399 None:intergenic 50.0%
TCTTTGCCTCATTGTACGCG+TGG + Chr8:48382656-48382675 None:intergenic 50.0%
TGAAACGGAGTCTTTGGCAC+AGG + Chr8:48382612-48382631 None:intergenic 50.0%
TGCATACAAGGCTACCCCAA+TGG - Chr8:48379443-48379462 MsG0880044728.01.T01:intron 50.0%
TGGGATTGTTCACCTCGTTG+GGG + Chr8:48381268-48381287 None:intergenic 50.0%
TGTCCACCTCCTTTGCAGAT+GGG + Chr8:48381115-48381134 None:intergenic 50.0%
TTACCACCACGCGTACAATG+AGG - Chr8:48382647-48382666 MsG0880044728.01.T01:intron 50.0%
! AGATGGGTTCACGTTGCAGT+TGG + Chr8:48381099-48381118 None:intergenic 50.0%
! ATGGGAGCGTATGAGCAACT+AGG - Chr8:48382103-48382122 MsG0880044728.01.T01:intron 50.0%
! GATGGGTTCACGTTGCAGTT+GGG + Chr8:48381098-48381117 None:intergenic 50.0%
! GTCTACTGATTGTGGCCTGT+TGG - Chr8:48377939-48377958 MsG0880044728.01.T01:CDS 50.0%
! TTTTCTAGGCCGAGCAGATG+AGG - Chr8:48377995-48378014 MsG0880044728.01.T01:CDS 50.0%
!! AAGGTGAAAGATGGTGGGAC+TGG + Chr8:48381331-48381350 None:intergenic 50.0%
!! CAAGCATCGGACCATCAACA+AGG + Chr8:48378527-48378546 None:intergenic 50.0%
!! CTTGTTGATGGTCCGATGCT+TGG - Chr8:48378525-48378544 MsG0880044728.01.T01:intron 50.0%
!! GAAAGGAGAGTGCTCCATTG+GGG + Chr8:48379460-48379479 None:intergenic 50.0%
!! GGAATGGGAGTGTTTGATGG+TGG - Chr8:48382858-48382877 MsG0880044728.01.T01:CDS 50.0%
!! GGTGGAATGGGAGTGTTTGA+TGG - Chr8:48382855-48382874 MsG0880044728.01.T01:CDS 50.0%
!! GTGAAAGGAGAGTGCTCCAT+TGG + Chr8:48379462-48379481 None:intergenic 50.0%
!! TGATGAGGGCGTGTTGTTTC+AGG - Chr8:48376993-48377012 MsG0880044728.01.T01:three_prime_UTR 50.0%
!! TTGGGGTAGCCTTGTATGCA+AGG + Chr8:48379443-48379462 None:intergenic 50.0%
!!! GTGTTGTTTTGTCGGGATCC+TGG - Chr8:48382918-48382937 MsG0880044728.01.T01:CDS 50.0%
AAAGATGGGGATTGTGGGGG+AGG + Chr8:48382180-48382199 None:intergenic 55.0%
ACAGGGACCAAAGTCGCACA+TGG + Chr8:48380393-48380412 None:intergenic 55.0%
ATTGTTCACCTCGTTGGGGC+TGG + Chr8:48381264-48381283 None:intergenic 55.0%
CCACTAGGCTGTAACAGTGG+GGG - Chr8:48380705-48380724 MsG0880044728.01.T01:intron 55.0%
CGTGAACCCATCTGCAAAGG+AGG - Chr8:48381106-48381125 MsG0880044728.01.T01:intron 55.0%
GAACCCATCTGCAAAGGAGG+TGG - Chr8:48381109-48381128 MsG0880044728.01.T01:intron 55.0%
GCCATGAGTCTTCAGCGGAA+TGG - Chr8:48380927-48380946 MsG0880044728.01.T01:CDS 55.0%
GGAGTCTTTGGCACAGGCAA+TGG + Chr8:48382606-48382625 None:intergenic 55.0%
GGGACTGGATTCAGCTCGTA+GGG + Chr8:48381316-48381335 None:intergenic 55.0%
GGGGTGTATGAGGAGTTGAG+AGG - Chr8:48382969-48382988 MsG0880044728.01.T01:CDS 55.0%
GTTGGTTAACGGCAGCGGTA+TGG - Chr8:48382255-48382274 MsG0880044728.01.T01:CDS 55.0%
TACCGCTGCCGTTAACCAAC+TGG + Chr8:48382255-48382274 None:intergenic 55.0%
TCTTCCGGTAGCCAGCAACA+AGG - Chr8:48379094-48379113 MsG0880044728.01.T01:intron 55.0%
TGCAGTGTAGGCGGTGGAAT+GGG - Chr8:48382843-48382862 MsG0880044728.01.T01:CDS 55.0%
TGGGACTGGATTCAGCTCGT+AGG + Chr8:48381317-48381336 None:intergenic 55.0%
TGGGTTCACGTTGCAGTTGG+GGG + Chr8:48381096-48381115 None:intergenic 55.0%
TGTTGGAACGTGAGACCGAG+AGG - Chr8:48383000-48383019 MsG0880044728.01.T01:CDS 55.0%
TTGAAGTGCAGTGTAGGCGG+TGG - Chr8:48382837-48382856 MsG0880044728.01.T01:CDS 55.0%
TTGCCTCATTGTACGCGTGG+TGG + Chr8:48382653-48382672 None:intergenic 55.0%
TTGTGGCCTGTTGGATCTCG+TGG - Chr8:48377948-48377967 MsG0880044728.01.T01:CDS 55.0%
! AGGCAGGTCGAAGAGCCTTT+TGG - Chr8:48382020-48382039 MsG0880044728.01.T01:intron 55.0%
! GATGAGGCACCTGTTACTCG+AGG - Chr8:48378011-48378030 MsG0880044728.01.T01:intron 55.0%
! TGTGTTGGCCACTAGGCCAA+TGG + Chr8:48380600-48380619 None:intergenic 55.0%
!! GCCATTGTTTTGCAGGAGGC+AGG - Chr8:48382004-48382023 MsG0880044728.01.T01:intron 55.0%
!! GGAGTGTTTGATGGTGGCAG+TGG - Chr8:48382864-48382883 MsG0880044728.01.T01:CDS 55.0%
ACGTTGCAGTTGGGGGGAGT+GGG + Chr8:48381089-48381108 None:intergenic 60.0%
AGGGGGAAATGTGGTGACCC+GGG - Chr8:48380641-48380660 MsG0880044728.01.T01:intron 60.0%
CACAAAGCAGCAGGCAGGGA+GGG - Chr8:48378253-48378272 MsG0880044728.01.T01:intron 60.0%
CACACAGGGAGGGGGAAATG+TGG - Chr8:48380632-48380651 MsG0880044728.01.T01:intron 60.0%
CCCCCACTGTTACAGCCTAG+TGG + Chr8:48380708-48380727 None:intergenic 60.0%
GAGGGGGAAATGTGGTGACC+CGG - Chr8:48380640-48380659 MsG0880044728.01.T01:intron 60.0%
GGGTTCACGTTGCAGTTGGG+GGG + Chr8:48381095-48381114 None:intergenic 60.0%
GGTTAACGGCAGCGGTATGG+AGG - Chr8:48382258-48382277 MsG0880044728.01.T01:CDS 60.0%
GTGCAGTGTAGGCGGTGGAA+TGG - Chr8:48382842-48382861 MsG0880044728.01.T01:CDS 60.0%
TCACAAAGCAGCAGGCAGGG+AGG - Chr8:48378252-48378271 MsG0880044728.01.T01:intron 60.0%
TGGAATCCCGGGTTCGAACC+CGG + Chr8:48380662-48380681 None:intergenic 60.0%
CACGTTGCAGTTGGGGGGAG+TGG + Chr8:48381090-48381109 None:intergenic 65.0%
GACGCTCGACCACACAGCTG+AGG + Chr8:48381053-48381072 None:intergenic 65.0%
GCTGTGTGGTCGAGCGTCAC+AGG - Chr8:48381055-48381074 MsG0880044728.01.T01:intron 65.0%
GGAATCCCGGGTTCGAACCC+GGG + Chr8:48380661-48380680 None:intergenic 65.0%
GGCTGAATCCAGCCCCAACG+AGG - Chr8:48381253-48381272 MsG0880044728.01.T01:intron 65.0%
TGGTGACCCGGGTTCGAACC+CGG - Chr8:48380652-48380671 MsG0880044728.01.T01:intron 65.0%
GGTGACCCGGGTTCGAACCC+GGG - Chr8:48380653-48380672 MsG0880044728.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 48376973 48383069 48376973 ID=MsG0880044728.01;Name=MsG0880044728.01
Chr8 mRNA 48376973 48383069 48376973 ID=MsG0880044728.01.T01;Parent=MsG0880044728.01;Name=MsG0880044728.01.T01;_AED=0.39;_eAED=0.39;_QI=0|1|0.85|1|1|1|7|763|291
Chr8 exon 48376973 48377786 48376973 ID=MsG0880044728.01.T01:exon:19996;Parent=MsG0880044728.01.T01
Chr8 exon 48377910 48378023 48377910 ID=MsG0880044728.01.T01:exon:19995;Parent=MsG0880044728.01.T01
Chr8 exon 48380087 48380218 48380087 ID=MsG0880044728.01.T01:exon:19994;Parent=MsG0880044728.01.T01
Chr8 exon 48380927 48381040 48380927 ID=MsG0880044728.01.T01:exon:19993;Parent=MsG0880044728.01.T01
Chr8 exon 48381684 48381829 48381684 ID=MsG0880044728.01.T01:exon:19992;Parent=MsG0880044728.01.T01
Chr8 exon 48382230 48382308 48382230 ID=MsG0880044728.01.T01:exon:19991;Parent=MsG0880044728.01.T01
Chr8 exon 48382830 48383069 48382830 ID=MsG0880044728.01.T01:exon:19990;Parent=MsG0880044728.01.T01
Chr8 CDS 48382830 48383069 48382830 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48382230 48382308 48382230 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48381684 48381829 48381684 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48380927 48381040 48380927 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48380087 48380218 48380087 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48377910 48378023 48377910 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 CDS 48377736 48377786 48377736 ID=MsG0880044728.01.T01:cds;Parent=MsG0880044728.01.T01
Chr8 three_prime_UTR 48376973 48377735 48376973 ID=MsG0880044728.01.T01:three_prime_utr;Parent=MsG0880044728.01.T01
Gene Sequence

>MsG0880044728.01.T01

TTGATTGTTTTTGGAGTTGATGATGAGGGCGTGTTGTTTCAGGAAGTTTCTGAGGCTGCTGCTGAAGCTCTTGTGAACCTTTCGCAAAATTCAAATCTTGCGGAGGAGATGGTTCAGATGAGACTTGTTGAAACAACAATGGATGTTTTGTATAAGCCTCAGTGTTGTGTCACTCGTTTGCTTGTTATGCTTTTGGTTAATCTCACTCAACTTGATGCTGGTACTGATTCCTTGCTTCAGATTGATGATGAGAAGGTGCGTGGATTATATGTTATGAAGCTTGTGAGGTCATTTTGTAGAACCACCCATGAGAAGGATGATGATTCTTTTGAACATGTCGGTTCCATACTTGTTAACATCACAAAGCAGCAGGCAGGGAGGGAGCTTCTACTCGACCCAAAACGGGGTCTCTTGAAACAAATAATTAGACAGTTCGATTCAAACAGCTCATTGAGAAAGAAAGGGGTCTCTGGAACTATTCGCAACTGTTGTTTTGAAGCTGAGAATCAGCTACAGAATTTGCTTTTAGTATCTGAGTTTCTCTGGCCTGCATTACTTCTTCCGGTAGCCAGCAACAAGATCTACAATGAGGAGGACAGAAAAAAAATGCCGCTTGAACTTGGGACTGCACTATCGATCGAACGCGAACCTGTTAATGATCCAGAAATTCGTACTCAAGTATTGGAAGCCATATACTTGATCTTATTGCAGGAGGCAGGTCGAAGAGCCTTTTGGTCTGTAAATGGGCCTAGAATAGTCCAAGTCGGTTACGAAGATGAGGAAGATCCAAAAGTGATGGGAGCGTATGAGCAACTAGGATCCTTGTTGGTTAACGGCAGCGGTATGGAGGAACCATCCACTGAGACGACAGAGTAG

Protein sequence

>MsG0880044728.01.T01

LIVFGVDDEGVLFQEVSEAAAEALVNLSQNSNLAEEMVQMRLVETTMDVLYKPQCCVTRLLVMLLVNLTQLDAGTDSLLQIDDEKVRGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQQAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVASNKIYNEEDRKKMPLELGTALSIEREPVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQVGYEDEEDPKVMGAYEQLGSLLVNGSGMEEPSTETTE*