AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001237.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001237.01.T02 MTR_1g033500 84.399 391 12 1 1 391 1 342 0.0 635
MsG0180001237.01.T02 MTR_1g033540 61.194 402 81 5 1 389 1 340 1.98e-160 467
MsG0180001237.01.T02 MTR_1g089865 45.333 75 41 0 46 120 38 112 1.57e-16 81.3
MsG0180001237.01.T02 MTR_1g089865 39.091 110 58 3 277 378 158 266 1.06e-15 78.6
MsG0180001237.01.T02 MTR_1g089865 45.333 75 41 0 46 120 38 112 2.65e-16 81.3
MsG0180001237.01.T02 MTR_1g089865 39.091 110 58 3 277 378 158 266 2.72e-15 78.2
MsG0180001237.01.T02 MTR_7g094250 46.154 78 39 2 42 116 23 100 3.42e-14 74.7
MsG0180001237.01.T02 MTR_7g094250 42.308 78 44 1 301 378 179 255 4.80e-14 74.3
MsG0180001237.01.T01 MTR_1g033500 97.568 658 16 0 1 658 1 658 0.0 1332
MsG0180001237.01.T01 MTR_1g033540 70.222 675 162 9 1 658 1 653 0.0 943
MsG0180001237.01.T01 MTR_1g089865 31.227 538 272 17 46 564 38 496 5.06e-68 231
MsG0180001237.01.T01 MTR_7g094250 31.365 542 273 20 42 564 23 484 2.39e-63 219
MsG0180001237.01.T01 MTR_1g089865 32.051 390 203 11 46 432 38 368 2.56e-52 185
MsG0180001237.01.T01 MTR_1g014720 29.526 359 214 13 140 479 65 403 1.16e-33 135
MsG0180001237.01.T01 MTR_2g007120 30.450 289 179 9 222 490 153 439 7.51e-32 130
MsG0180001237.01.T01 MTR_2g007060 31.982 222 142 5 255 469 135 354 1.21e-28 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001237.01.T02 AT1G14710 38.119 404 164 9 1 391 1 331 3.91e-68 227
MsG0180001237.01.T02 AT1G14710 38.119 404 164 9 1 391 1 331 3.91e-68 227
MsG0180001237.01.T02 AT4G02940 48.750 80 38 1 46 122 47 126 6.78e-18 86.3
MsG0180001237.01.T02 AT4G02940 48.718 78 39 1 301 378 223 299 3.59e-13 71.6
MsG0180001237.01.T02 AT2G48080 50.704 71 34 1 46 115 23 93 2.75e-16 80.9
MsG0180001237.01.T02 AT2G48080 39.362 94 56 1 285 378 133 225 3.11e-12 68.6
MsG0180001237.01.T01 AT1G14710 45.942 616 265 18 1 589 1 575 9.66e-163 480
MsG0180001237.01.T01 AT1G14710 45.942 616 265 18 1 589 1 575 9.66e-163 480
MsG0180001237.01.T01 AT4G02940 31.283 569 328 16 46 597 47 569 5.55e-65 224
MsG0180001237.01.T01 AT2G48080 32.509 283 172 6 213 489 117 386 1.15e-38 149
MsG0180001237.01.T01 AT2G48080 31.319 182 104 5 46 209 23 201 8.48e-17 84.0
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 123 359 8.97e-35 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 123 359 8.97e-35 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 123 359 8.97e-35 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 156 392 1.28e-34 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 156 392 1.28e-34 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 114 350 1.47e-34 137
MsG0180001237.01.T01 AT2G17970 34.454 238 143 5 252 477 197 433 3.35e-34 137
MsG0180001237.01.T01 AT1G48980 33.203 256 151 7 222 466 50 296 6.52e-33 129
MsG0180001237.01.T01 AT1G48980 33.203 256 151 7 222 466 54 300 6.56e-33 130
MsG0180001237.01.T01 AT2G17970 34.597 211 130 4 252 455 123 332 1.81e-32 128
MsG0180001237.01.T01 AT2G17970 34.597 211 130 4 252 455 197 406 7.53e-32 128
MsG0180001237.01.T01 AT4G36090 31.984 247 155 5 252 486 133 378 1.97e-31 128
MsG0180001237.01.T01 AT4G36090 31.984 247 155 5 252 486 201 446 5.12e-31 128
MsG0180001237.01.T01 AT1G48980 32.787 244 144 7 222 454 54 288 2.79e-30 122
MsG0180001237.01.T01 AT4G36090 33.333 210 132 4 252 454 201 409 2.10e-28 118
MsG0180001237.01.T01 AT2G17970 33.333 186 116 4 252 430 197 381 4.48e-23 102
MsG0180001237.01.T01 AT4G36090 33.511 188 104 6 252 432 201 374 1.17e-20 95.1
MsG0180001237.01.T01 AT4G36090 33.511 188 104 6 252 432 201 374 1.17e-20 95.1

Find 130 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTTCCATGTCCTCTTA+TGG 0.176074 1:-18048623 None:intergenic
ACCTCTACGATAAAGGAAAA+TGG 0.206612 1:+18050983 MsG0180001237.01.T01:CDS
GGGAAGGATGTATAACATTT+TGG 0.220996 1:+18051289 MsG0180001237.01.T01:three_prime_UTR
CATTTGTCTCAGAGCACTTT+GGG 0.274989 1:+18049117 MsG0180001237.01.T01:CDS
ACTGAATGTGACATGACTTT+TGG 0.308787 1:+18049089 MsG0180001237.01.T01:CDS
AAACAATGGCTGCATGCTAT+TGG 0.315785 1:-18050750 None:intergenic
TCTCTTCCATGTCCTCTTAT+GGG 0.320704 1:-18048622 None:intergenic
TATTCTGCTGTTCAAGTAAC+CGG 0.321185 1:+18050695 MsG0180001237.01.T01:CDS
ATTTCCCTTGCATCACTAGA+AGG 0.334442 1:-18050478 None:intergenic
AACATTTGGCCGTCTTCATT+TGG 0.344951 1:+18049041 MsG0180001237.01.T01:CDS
ACCATTCAACGCCAAACATT+TGG 0.352190 1:+18049027 MsG0180001237.01.T01:CDS
ATACACGACTTCCGACCTTT+TGG 0.357074 1:+18046632 MsG0180001237.01.T01:intron
ATCTCTCTCTAATCTCTCAT+TGG 0.361935 1:-18051156 None:intergenic
ATGCGTTGTTTGTGAATAGA+AGG 0.371926 1:-18050527 None:intergenic
GAACAGGCTATAGAGGAAAA+AGG 0.372518 1:+18051106 MsG0180001237.01.T01:CDS
AATTCCAACCTCTACGATAA+AGG 0.375623 1:+18050976 MsG0180001237.01.T01:CDS
TTCATTTAGTGAAACTTCAT+TGG 0.376884 1:-18048764 None:intergenic
AATGAAGACGGCCAAATGTT+TGG 0.380699 1:-18049038 None:intergenic
TTGGTCATTATTATAGAAGT+AGG 0.386767 1:-18048745 None:intergenic
CCAATCCCGCCTGGCTCTAC+AGG 0.389178 1:+18050818 MsG0180001237.01.T01:CDS
AACAATGGCTGCATGCTATT+GGG 0.390202 1:-18050749 None:intergenic
CCTCCTCGAGTCGTTGTTCC+CGG 0.394340 1:+18050869 MsG0180001237.01.T01:CDS
CCTGTAGAGCCAGGCGGGAT+TGG 0.404095 1:-18050818 None:intergenic
TACCTTAACTGAAGTGAACT+TGG 0.411064 1:+18050946 MsG0180001237.01.T01:CDS
AGCAATGTCAAGCTTTCTCT+TGG 0.412536 1:+18049149 MsG0180001237.01.T01:CDS
CACAGGTGTAGCAAATTGTA+TGG 0.416248 1:-18050795 None:intergenic
ACCCAAGTTCACTTCAGTTA+AGG 0.419432 1:-18050948 None:intergenic
AATTGTATGGGAGTTGCAAC+TGG 0.420597 1:-18050782 None:intergenic
GCCAAATGTTTGGCGTTGAA+TGG 0.425318 1:-18049028 None:intergenic
TCTAATCATAGCAATACTAA+TGG 0.437415 1:+18051010 MsG0180001237.01.T01:CDS
CCTCTACGATAAAGGAAAAT+GGG 0.441941 1:+18050984 MsG0180001237.01.T01:CDS
ACATTGTCCACGTCAGCAAT+TGG 0.447329 1:-18048664 None:intergenic
TGAAGTTGAACAGGCTATAG+AGG 0.449054 1:+18051099 MsG0180001237.01.T01:CDS
ATATGATTCGGAGATCTGTT+TGG 0.450319 1:-18050644 None:intergenic
GTCAGGAAAAGCGTATAAAC+AGG 0.452435 1:-18049068 None:intergenic
TCACCAAAAGGTAAAATGAA+TGG 0.458597 1:+18051034 MsG0180001237.01.T01:CDS
ATGGGAGTTGCAACTGGCGC+TGG 0.459514 1:-18050776 None:intergenic
GTCAAGCTTTCTCTTGGACC+TGG 0.461574 1:+18049155 MsG0180001237.01.T01:CDS
AATACTAATGGTTCACCAAA+AGG 0.461948 1:+18051022 MsG0180001237.01.T01:CDS
AGGTGCAACTGAAGTTGAAC+AGG 0.464777 1:+18051090 MsG0180001237.01.T01:CDS
ACAGAATGTGCATCAAATTC+TGG 0.468027 1:+18046824 MsG0180001237.01.T01:CDS
ACAGGAGTCTTCCTTCCGCC+TGG 0.470551 1:+18050893 MsG0180001237.01.T01:CDS
ACATTTGTCTCAGAGCACTT+TGG 0.470759 1:+18049116 MsG0180001237.01.T01:CDS
CGAGGAGGAGGATGCCTTGG+AGG 0.472071 1:-18050854 None:intergenic
AAATCGACGATGCAAGCATC+AGG 0.473203 1:-18048875 None:intergenic
ACACCTGTGCCAATCCCGCC+TGG 0.477942 1:+18050809 MsG0180001237.01.T01:CDS
TGCAATTCGGAGACCATTGT+AGG 0.478595 1:+18046541 MsG0180001237.01.T01:intron
CGGAAGGAAGACTCCTGTGC+CGG 0.489719 1:-18050888 None:intergenic
CAAGAATGCAATGGTAATGC+AGG 0.494423 1:+18051070 MsG0180001237.01.T01:CDS
CATCGTCGATTTCTATAATG+AGG 0.495227 1:+18048886 MsG0180001237.01.T01:CDS
TGACAGCGTCGTTCAAAGGC+AGG 0.496058 1:+18048686 MsG0180001237.01.T01:intron
GGACGATGACTAATATGATT+CGG 0.496573 1:-18050656 None:intergenic
CGACATATGTGGTTAACAAA+AGG 0.500536 1:+18048599 MsG0180001237.01.T01:CDS
CGAGTCGTTGTTCCCGGCAC+AGG 0.509569 1:+18050875 MsG0180001237.01.T01:CDS
AAGTCATGTCACATTCAGTC+AGG 0.512515 1:-18049085 None:intergenic
TCCATCCTGTAGAGCCAGGC+GGG 0.513497 1:-18050823 None:intergenic
GGAAGGAAGACTCCTGTGCC+GGG 0.513713 1:-18050887 None:intergenic
GAGCCAGGCGGGATTGGCAC+AGG 0.514193 1:-18050812 None:intergenic
ACTCGAGGAGGAGGATGCCT+TGG 0.514438 1:-18050857 None:intergenic
ACAGTCCATCCTGTAGAGCC+AGG 0.516590 1:-18050827 None:intergenic
AATTTCCAGAGCTCTTCAAA+AGG 0.517631 1:-18046781 None:intergenic
TGAGATGAGTTAGCAGAGCC+AGG 0.521622 1:-18050911 None:intergenic
TCAAGTAACCGGGGTGCTGC+CGG 0.522831 1:+18050706 MsG0180001237.01.T01:CDS
AAGAGCTCTGGAAATTCTCA+AGG 0.523667 1:+18046788 MsG0180001237.01.T01:CDS
TTGAACAGCAGAATAATGCT+TGG 0.524124 1:-18050687 None:intergenic
TGGAAGAGAGATGATTCAGT+TGG 0.529263 1:+18048636 MsG0180001237.01.T01:CDS
ACTGAAGTGAACTTGGGTGT+TGG 0.533352 1:+18050953 MsG0180001237.01.T01:CDS
GTTAACAAAAGGCCCATAAG+AGG 0.539978 1:+18048610 MsG0180001237.01.T01:CDS
TTTGGCCGTCTTCATTTGGA+AGG 0.540261 1:+18049045 MsG0180001237.01.T01:CDS
TCAAGCTTTCTCTTGGACCT+GGG 0.542395 1:+18049156 MsG0180001237.01.T01:CDS
TGGTCATTATTATAGAAGTA+GGG 0.545137 1:-18048744 None:intergenic
AATGTGACAGCGTCGTTCAA+AGG 0.545588 1:+18048682 MsG0180001237.01.T01:CDS
TGAACAGCAGAATAATGCTT+GGG 0.545822 1:-18050686 None:intergenic
ATTCTGCTGTTCAAGTAACC+GGG 0.548410 1:+18050696 MsG0180001237.01.T01:CDS
CTCAATGATATCTTGAAACA+AGG 0.552597 1:-18048819 None:intergenic
TCAAGATATCATTGAGCGCA+TGG 0.553274 1:+18048826 MsG0180001237.01.T01:CDS
TTCGGAGATCTGTTTGGTGC+GGG 0.555113 1:-18050638 None:intergenic
GGAAGAGAGATGATTCAGTT+GGG 0.559430 1:+18048637 MsG0180001237.01.T01:CDS
AATGAGAGATTAGAGAGAGA+TGG 0.562454 1:+18051158 MsG0180001237.01.T01:exon
GCAACATGTAGGGATGGAGC+CGG 0.564026 1:-18050725 None:intergenic
TCCCGCCTGGCTCTACAGGA+TGG 0.566829 1:+18050822 MsG0180001237.01.T01:CDS
GGAACAACGACTCGAGGAGG+AGG 0.567084 1:-18050866 None:intergenic
AGAGATGGAAAGCTTATCAA+AGG 0.567468 1:+18051173 MsG0180001237.01.T01:three_prime_UTR
TTTCCCTTGCATCACTAGAA+GGG 0.569855 1:-18050477 None:intergenic
CTCCGTCAGCAACTTCACAT+TGG 0.570942 1:+18050612 MsG0180001237.01.T01:CDS
GAATAATGCTTGGGAGCTAA+CGG 0.572073 1:-18050677 None:intergenic
GATGGACTGTGGCTCCTCCA+AGG 0.578865 1:+18050840 MsG0180001237.01.T01:CDS
GGAATGGAACTAACAAAGGA+AGG 0.582272 1:-18051325 None:intergenic
TGCTATTGGGAGCAACATGT+AGG 0.582983 1:-18050736 None:intergenic
AGTTAGCAGAGCCAGGCGGA+AGG 0.584884 1:-18050904 None:intergenic
GCAAGACCTTGAGCATCACT+TGG 0.587423 1:-18050590 None:intergenic
ACTGGCGCTGGGACAAACAA+TGG 0.587978 1:-18050764 None:intergenic
CAAAATGTAAAGAGCGGCAA+CGG 0.588999 1:+18051232 MsG0180001237.01.T01:three_prime_UTR
GATATAACATTATACTGCAA+AGG 0.592804 1:+18051257 MsG0180001237.01.T01:three_prime_UTR
ATGATATCTTGAAACAAGGA+AGG 0.593091 1:-18048815 None:intergenic
AACTCATCTCAGCACTCGCA+AGG 0.594014 1:+18050923 MsG0180001237.01.T01:CDS
GCTATTGGGAGCAACATGTA+GGG 0.596613 1:-18050735 None:intergenic
AACAGGGAGTCCGACATATG+TGG 0.596795 1:+18048588 MsG0180001237.01.T01:intron
AGGTCCCTTCTAGTGATGCA+AGG 0.600287 1:+18050473 MsG0180001237.01.T01:intron
TTGGGAGCAACATGTAGGGA+TGG 0.600535 1:-18050731 None:intergenic
AAAAGGCCCATAAGAGGACA+TGG 0.601532 1:+18048616 MsG0180001237.01.T01:CDS
TGGGAGTTGCAACTGGCGCT+GGG 0.602477 1:-18050775 None:intergenic
GGTCCCTTCTAGTGATGCAA+GGG 0.605574 1:+18050474 MsG0180001237.01.T01:intron
TGCAGTCAAGTGGCCTACAA+TGG 0.606390 1:-18046554 None:intergenic
ATACTGCAAAGGAGAGAACA+AGG 0.606432 1:+18051268 MsG0180001237.01.T01:three_prime_UTR
AGAAGGAATGGAACTAACAA+AGG 0.607159 1:-18051329 None:intergenic
GGATGGAGCCGGCAGCACCC+CGG 0.612297 1:-18050714 None:intergenic
AATGTAAAGAGCGGCAACGG+TGG 0.613143 1:+18051235 MsG0180001237.01.T01:three_prime_UTR
ACCTTAACTGAAGTGAACTT+GGG 0.617201 1:+18050947 MsG0180001237.01.T01:CDS
ACAGGTGTAGCAAATTGTAT+GGG 0.617438 1:-18050794 None:intergenic
ATTCGGAGATCTGTTTGGTG+CGG 0.619364 1:-18050639 None:intergenic
GGGTGTTCCAATTGCTGACG+TGG 0.620031 1:+18048657 MsG0180001237.01.T01:CDS
TATTATAGAAGTAGGGAATG+TGG 0.620045 1:-18048737 None:intergenic
ATTGAAAGACAAGAATGCAA+TGG 0.620535 1:+18051061 MsG0180001237.01.T01:CDS
GAATGTGCATCAAATTCTGG+AGG 0.638203 1:+18046827 MsG0180001237.01.T01:CDS
ACAGGCCTTCCAAATGAAGA+CGG 0.639412 1:-18049050 None:intergenic
ATTTGTCTCAGAGCACTTTG+GGG 0.647839 1:+18049118 MsG0180001237.01.T01:CDS
CCGGGAACAACGACTCGAGG+AGG 0.654433 1:-18050869 None:intergenic
GTGCCGGGAACAACGACTCG+AGG 0.655043 1:-18050872 None:intergenic
GAATCTGACAGATAAGAATG+TGG 0.660059 1:+18048784 MsG0180001237.01.T01:intron
TTCTGCTGTTCAAGTAACCG+GGG 0.662775 1:+18050697 MsG0180001237.01.T01:CDS
CTTAACAGACATGACTTGTG+AGG 0.663477 1:-18048852 None:intergenic
GCAAAGGAGAGAACAAGGGA+AGG 0.672030 1:+18051273 MsG0180001237.01.T01:three_prime_UTR
TTGAAGCAAAATGTAAAGAG+CGG 0.673556 1:+18051226 MsG0180001237.01.T01:three_prime_UTR
TGGCTCTACAGGATGGACTG+TGG 0.684505 1:+18050829 MsG0180001237.01.T01:CDS
TACTGCAAAGGAGAGAACAA+GGG 0.689014 1:+18051269 MsG0180001237.01.T01:three_prime_UTR
GACCAATGTGAAGTTGCTGA+CGG 0.693407 1:-18050614 None:intergenic
TCTCTGCCAAGTGATGCTCA+AGG 0.700665 1:+18050584 MsG0180001237.01.T01:CDS
GATGAGTTAGCAGAGCCAGG+CGG 0.703314 1:-18050908 None:intergenic
GTCCATCCTGTAGAGCCAGG+CGG 0.716481 1:-18050824 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATTAAAAATTA+GGG - Chr1:18045414-18045433 None:intergenic 0.0%
!! TAATAAATAAATTAAAAATT+AGG - Chr1:18045415-18045434 None:intergenic 0.0%
!! GACTAAATTTATTATAAAAA+AGG - Chr1:18048202-18048221 None:intergenic 10.0%
!! GATGATTAATTAATATAATA+AGG - Chr1:18049523-18049542 None:intergenic 10.0%
!!! AAATATACAATTTAAAATTG+TGG + Chr1:18049438-18049457 MsG0180001237.01.T01:intron 10.0%
!!! CTTTTATATTTTATTTTATG+GGG + Chr1:18047473-18047492 MsG0180001237.01.T01:intron 10.0%
!!! TTTTTTTTTTTCAATATACA+AGG + Chr1:18048058-18048077 MsG0180001237.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTGGAA+GGG + Chr1:18048924-18048943 MsG0180001237.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGGA+AGG + Chr1:18048923-18048942 MsG0180001237.01.T01:intron 10.0%
!! AAAAAAAATTGACAACAATT+TGG - Chr1:18049673-18049692 None:intergenic 15.0%
!! AATTTGATGGAAAAAAAATT+AGG - Chr1:18045359-18045378 None:intergenic 15.0%
!! ACAGAGAAAATAATAATAAT+AGG - Chr1:18050444-18050463 None:intergenic 15.0%
!! AGTAGATAAAAAATTCAATA+TGG - Chr1:18046719-18046738 None:intergenic 15.0%
!! ATTACAAATAATCATAGTAA+TGG - Chr1:18049725-18049744 None:intergenic 15.0%
!! ATTCAAAAAAAGTTATCAAA+GGG + Chr1:18047894-18047913 MsG0180001237.01.T01:intron 15.0%
!! ATTTGATGGAAAAAAAATTA+GGG - Chr1:18045358-18045377 None:intergenic 15.0%
!! GATAGATATTTAAAAAGATT+AGG - Chr1:18047113-18047132 None:intergenic 15.0%
!! TAAAAGATATAAGAAAAAGA+AGG - Chr1:18047459-18047478 None:intergenic 15.0%
!! TAAGTGTATTTATGAAATTT+GGG + Chr1:18046917-18046936 MsG0180001237.01.T01:intron 15.0%
!! TACTATGATTATTTGTAATT+AGG + Chr1:18049726-18049745 MsG0180001237.01.T01:intron 15.0%
!! TATTCAAAAAAAGTTATCAA+AGG + Chr1:18047893-18047912 MsG0180001237.01.T01:intron 15.0%
!! TTACAAATAATCATAGTAAT+GGG - Chr1:18049724-18049743 None:intergenic 15.0%
!!! AATTTATTTTTCATATGATC+TGG + Chr1:18046485-18046504 MsG0180001237.01.T01:intron 15.0%
!!! ATATTGAATTTTTTATCTAC+TGG + Chr1:18046718-18046737 MsG0180001237.01.T01:intron 15.0%
!!! CATATATAACTCATTTTTTA+TGG - Chr1:18048084-18048103 None:intergenic 15.0%
!!! GTTTTTATTTACAATTTTTG+TGG + Chr1:18050054-18050073 MsG0180001237.01.T01:intron 15.0%
!!! TTATTTTTCATTCTTTGTTT+TGG + Chr1:18047684-18047703 MsG0180001237.01.T01:intron 15.0%
!!! TTTTATATATTTTCCCATAT+AGG + Chr1:18048240-18048259 MsG0180001237.01.T01:intron 15.0%
!!! TTTTTTTGTGCTTTTTTTTT+GGG + Chr1:18048359-18048378 MsG0180001237.01.T01:intron 15.0%
!!! TTTTTTTTGTGCTTTTTTTT+TGG + Chr1:18048358-18048377 MsG0180001237.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTTGGAAG+GGG + Chr1:18048925-18048944 MsG0180001237.01.T01:intron 15.0%
!! AAAAAAAAACGACAACAATT+TGG - Chr1:18049588-18049607 None:intergenic 20.0%
!! AAAAATGACAAAAAGAAATG+AGG - Chr1:18047421-18047440 None:intergenic 20.0%
!! AAATGTATTACTTTCTAAGT+AGG + Chr1:18049884-18049903 MsG0180001237.01.T01:intron 20.0%
!! AACTTTAAGTATTATGTCTT+TGG + Chr1:18048483-18048502 MsG0180001237.01.T01:intron 20.0%
!! AATGAAAAATAAATTAGCGA+TGG - Chr1:18047676-18047695 None:intergenic 20.0%
!! AATGATGGTCTAAAAAAAAT+TGG - Chr1:18048340-18048359 None:intergenic 20.0%
!! AGTACAATAAATATTTGACT+TGG - Chr1:18048439-18048458 None:intergenic 20.0%
!! ATAAAAAATCATCAATCTGA+TGG + Chr1:18046758-18046777 MsG0180001237.01.T01:CDS 20.0%
!! ATATTAAGACAACAAAAAGA+AGG - Chr1:18051349-18051368 None:intergenic 20.0%
!! ATGATGGTCTAAAAAAAATT+GGG - Chr1:18048339-18048358 None:intergenic 20.0%
!! CAAATAAAAATTAATACCAC+TGG - Chr1:18048144-18048163 None:intergenic 20.0%
!! CAATATCTTAAATTATAACG+GGG + Chr1:18048384-18048403 MsG0180001237.01.T01:intron 20.0%
!! CCAATATCTTAAATTATAAC+GGG + Chr1:18048383-18048402 MsG0180001237.01.T01:intron 20.0%
!! CCATATTACAATTATCTATA+GGG + Chr1:18049002-18049021 MsG0180001237.01.T01:intron 20.0%
!! CTAAGTGTATTTATGAAATT+TGG + Chr1:18046916-18046935 MsG0180001237.01.T01:intron 20.0%
!! GAATTATTGAATCTGAATAA+GGG - Chr1:18050403-18050422 None:intergenic 20.0%
!! GCCAATATCTTAAATTATAA+CGG + Chr1:18048382-18048401 MsG0180001237.01.T01:intron 20.0%
!! TAATAATAGGCCATAATAAT+CGG - Chr1:18050431-18050450 None:intergenic 20.0%
!! TACTTAGAAAGTAATACATT+TGG - Chr1:18049885-18049904 None:intergenic 20.0%
!! TCATAGAAGACAATTAATTA+TGG + Chr1:18049750-18049769 MsG0180001237.01.T01:intron 20.0%
!! TCCATATTACAATTATCTAT+AGG + Chr1:18049001-18049020 MsG0180001237.01.T01:intron 20.0%
!! TGAATTATTGAATCTGAATA+AGG - Chr1:18050404-18050423 None:intergenic 20.0%
!! TGGTTAACAAAGTTTAAATA+TGG - Chr1:18049649-18049668 None:intergenic 20.0%
!!! AAAAAGCACAAAAAAAATGA+TGG - Chr1:18048355-18048374 None:intergenic 20.0%
!!! AAATTTGACTACAATTTTGA+TGG + Chr1:18049261-18049280 MsG0180001237.01.T01:intron 20.0%
!!! AATGGTTTTAAATTGCAATT+CGG + Chr1:18046528-18046547 MsG0180001237.01.T01:intron 20.0%
!!! ATAATCAGTTTTATCAATTG+CGG - Chr1:18046406-18046425 None:intergenic 20.0%
!!! TATTTTGTTGTTGTTACTAT+TGG + Chr1:18049218-18049237 MsG0180001237.01.T01:intron 20.0%
!!! TTTTTTGTGCTTTTTTTTTG+GGG + Chr1:18048360-18048379 MsG0180001237.01.T01:intron 20.0%
!!! TTTTTTTTTTTTTTGGAAGG+GGG + Chr1:18048926-18048945 MsG0180001237.01.T01:intron 20.0%
! AAAAAACAGCAAGTAATGTT+CGG + Chr1:18047021-18047040 MsG0180001237.01.T01:intron 25.0%
! AAAATTGACAACAATTTGGT+TGG - Chr1:18049669-18049688 None:intergenic 25.0%
! AAACAAAAACCTAGAATTCA+TGG - Chr1:18050007-18050026 None:intergenic 25.0%
! AATAATAGGCCATAATAATC+GGG - Chr1:18050430-18050449 None:intergenic 25.0%
! AATTCAATACCCGATTATTA+TGG + Chr1:18050418-18050437 MsG0180001237.01.T01:intron 25.0%
! ACCAACATTAAAAATATGTG+CGG - Chr1:18047781-18047800 None:intergenic 25.0%
! ATGTTACTGTGCTTATAATT+TGG + Chr1:18050116-18050135 MsG0180001237.01.T01:intron 25.0%
! CCCTATAGATAATTGTAATA+TGG - Chr1:18049005-18049024 None:intergenic 25.0%
! GATATAACATTATACTGCAA+AGG + Chr1:18051257-18051276 MsG0180001237.01.T01:three_prime_UTR 25.0%
! GCTAATATCTTTAATGAACA+GGG + Chr1:18048572-18048591 MsG0180001237.01.T01:intron 25.0%
! TCAAATTTGTAAACGTAACA+CGG + Chr1:18048976-18048995 MsG0180001237.01.T01:intron 25.0%
! TCTAATCATAGCAATACTAA+TGG + Chr1:18051010-18051029 MsG0180001237.01.T01:CDS 25.0%
! TGAGTTAAATACATTGCTTA+TGG + Chr1:18050328-18050347 MsG0180001237.01.T01:intron 25.0%
! TGATGGTCTAAAAAAAATTG+GGG - Chr1:18048338-18048357 None:intergenic 25.0%
! TGCTAATATCTTTAATGAAC+AGG + Chr1:18048571-18048590 MsG0180001237.01.T01:intron 25.0%
! TGGTCATTATTATAGAAGTA+GGG - Chr1:18048747-18048766 None:intergenic 25.0%
! TGGTTAACGAAGTTTAAATA+TGG - Chr1:18049564-18049583 None:intergenic 25.0%
! TTATTCAAATCATAGTCAAC+AGG - Chr1:18046860-18046879 None:intergenic 25.0%
! TTCATTGGTCAATGATTTAA+GGG + Chr1:18047584-18047603 MsG0180001237.01.T01:CDS 25.0%
! TTCATTTAGTGAAACTTCAT+TGG - Chr1:18048767-18048786 None:intergenic 25.0%
! TTGGTCATTATTATAGAAGT+AGG - Chr1:18048748-18048767 None:intergenic 25.0%
! TTGTATATTTGAACACGATT+TGG - Chr1:18049428-18049447 None:intergenic 25.0%
!! AAAGATTAGGATGTCAATTT+TGG - Chr1:18047100-18047119 None:intergenic 25.0%
!! AAGATTAGGATGTCAATTTT+GGG - Chr1:18047099-18047118 None:intergenic 25.0%
!! ATTTGTTGACCTTATTTGTT+TGG + Chr1:18049183-18049202 MsG0180001237.01.T01:intron 25.0%
!! CCCGTTATAATTTAAGATAT+TGG - Chr1:18048386-18048405 None:intergenic 25.0%
!! CTTTTAGTCAATTGTATTCA+AGG + Chr1:18050160-18050179 MsG0180001237.01.T01:intron 25.0%
!! GCTAACTATCATCTTTAAAA+TGG + Chr1:18047940-18047959 MsG0180001237.01.T01:intron 25.0%
!! TTTCCATTCATTTTACCTTT+TGG - Chr1:18051040-18051059 None:intergenic 25.0%
!!! ATTGCAACATTTTGAAACTT+AGG - Chr1:18048529-18048548 None:intergenic 25.0%
!!! GAAATGTTACTATTTTTAGC+AGG - Chr1:18046658-18046677 None:intergenic 25.0%
!!! GTTGATGATGTTTAAAATCA+TGG + Chr1:18049460-18049479 MsG0180001237.01.T01:intron 25.0%
!!! TTGCAACATTTTGAAACTTA+GGG - Chr1:18048528-18048547 None:intergenic 25.0%
!!! TTGTTGTTATTGAGTTTTCA+TGG + Chr1:18045485-18045504 MsG0180001237.01.T01:intron 25.0%
!!! TTTTTGTGTTGCAGTTTTAA+TGG + Chr1:18046510-18046529 MsG0180001237.01.T01:intron 25.0%
AAAAACGACAACAATTTGGT+TGG - Chr1:18049584-18049603 None:intergenic 30.0%
AAACTGATTATACTACACCA+TGG + Chr1:18046415-18046434 MsG0180001237.01.T01:intron 30.0%
AAATTGGGGTACAAAAACAA+AGG - Chr1:18048324-18048343 None:intergenic 30.0%
AAGACAACAAAAAGAAGGAA+TGG - Chr1:18051344-18051363 None:intergenic 30.0%
AAGAGTGAAGAAGTTAAATC+TGG + Chr1:18046023-18046042 MsG0180001237.01.T01:CDS 30.0%
AAGATGATAGTTAGCATCAA+AGG - Chr1:18047935-18047954 None:intergenic 30.0%
AATACTAATGGTTCACCAAA+AGG + Chr1:18051022-18051041 MsG0180001237.01.T01:CDS 30.0%
AATTGGGGTACAAAAACAAA+GGG - Chr1:18048323-18048342 None:intergenic 30.0%
AATTTACCCTACCTAATACT+AGG - Chr1:18049820-18049839 None:intergenic 30.0%
ACATTGCTTATGGTAATTAG+AGG + Chr1:18050338-18050357 MsG0180001237.01.T01:intron 30.0%
ACCAAGTACATTTAAAGATG+AGG - Chr1:18049857-18049876 None:intergenic 30.0%
ACTAGCATACCAAACAAATA+AGG - Chr1:18049195-18049214 None:intergenic 30.0%
ACTGTTAAACCACAATGTTA+GGG + Chr1:18046179-18046198 MsG0180001237.01.T01:intron 30.0%
AGTTTCAAAACTTGGTTCAT+TGG + Chr1:18047569-18047588 MsG0180001237.01.T01:CDS 30.0%
ATATCATGCATCATGATTCA+CGG - Chr1:18050197-18050216 None:intergenic 30.0%
ATGATATCTTGAAACAAGGA+AGG - Chr1:18048818-18048837 None:intergenic 30.0%
ATTGAAAGACAAGAATGCAA+TGG + Chr1:18051061-18051080 MsG0180001237.01.T01:CDS 30.0%
ATTTACCCTACCTAATACTA+GGG - Chr1:18049819-18049838 None:intergenic 30.0%
CAAAAAAAGTTATCAAAGGG+AGG + Chr1:18047897-18047916 MsG0180001237.01.T01:intron 30.0%
CAAACTACATGTATCCTATA+AGG - Chr1:18047207-18047226 None:intergenic 30.0%
CGAAAAAGTGGAAAATTTGA+TGG - Chr1:18045372-18045391 None:intergenic 30.0%
CTCAATGATATCTTGAAACA+AGG - Chr1:18048822-18048841 None:intergenic 30.0%
GAGTTATATATGTTCAGTGT+CGG + Chr1:18048092-18048111 MsG0180001237.01.T01:intron 30.0%
GGTCTCTAAATTGTTTAAGA+CGG + Chr1:18048405-18048424 MsG0180001237.01.T01:intron 30.0%
GTAGTTGAGTAGTTATCAAA+AGG + Chr1:18047856-18047875 MsG0180001237.01.T01:intron 30.0%
GTTCATTGGTCAATGATTTA+AGG + Chr1:18047583-18047602 MsG0180001237.01.T01:CDS 30.0%
TAAATACACTTAGCAAAGTC+TGG - Chr1:18046909-18046928 None:intergenic 30.0%
TATTATAGAAGTAGGGAATG+TGG - Chr1:18048740-18048759 None:intergenic 30.0%
TCACCAAAAGGTAAAATGAA+TGG + Chr1:18051034-18051053 MsG0180001237.01.T01:CDS 30.0%
TGAATCATGATGCATGATAT+GGG + Chr1:18050197-18050216 MsG0180001237.01.T01:intron 30.0%
TGGTTAATGCTATTCAAATG+TGG + Chr1:18049281-18049300 MsG0180001237.01.T01:intron 30.0%
TGTAATTAACCATGACTTTC+TGG + Chr1:18049378-18049397 MsG0180001237.01.T01:intron 30.0%
TTAGCAATGAGATGTTTGAT+GGG + Chr1:18047360-18047379 MsG0180001237.01.T01:CDS 30.0%
TTGAAGCAAAATGTAAAGAG+CGG + Chr1:18051226-18051245 MsG0180001237.01.T01:three_prime_UTR 30.0%
TTGTTGAGTAATGAGAAGAA+AGG - Chr1:18045271-18045290 None:intergenic 30.0%
TTTCATCATCCATGAATTCT+AGG + Chr1:18049995-18050014 MsG0180001237.01.T01:intron 30.0%
TTTGTCTGATTGTTATGCAA+TGG + Chr1:18047723-18047742 MsG0180001237.01.T01:intron 30.0%
! AAAAACAAAGGGTTTGGAAT+GGG - Chr1:18048312-18048331 None:intergenic 30.0%
! AAGGGAATTTTGTGGTTAAA+GGG + Chr1:18045985-18046004 MsG0180001237.01.T01:CDS 30.0%
! AGTACTGAAGTTTCAAAACT+TGG + Chr1:18047561-18047580 MsG0180001237.01.T01:CDS 30.0%
! ATTTGGCTTAGTAACTTGAA+AGG + Chr1:18050133-18050152 MsG0180001237.01.T01:intron 30.0%
! ATTTTCTCTGTTTCAACTGT+AGG + Chr1:18050453-18050472 MsG0180001237.01.T01:intron 30.0%
! CTTTTGTTAACCACATATGT+CGG - Chr1:18048601-18048620 None:intergenic 30.0%
! GTAGGGTAAATTGTTTTCTT+TGG + Chr1:18049828-18049847 MsG0180001237.01.T01:intron 30.0%
! TACCGAGTATTTTCAAATAG+CGG + Chr1:18046251-18046270 MsG0180001237.01.T01:intron 30.0%
! TTATCAAAAGGAGGTCATTT+TGG + Chr1:18047868-18047887 MsG0180001237.01.T01:intron 30.0%
!! AAATATTTGACTTGGCATCA+GGG - Chr1:18048431-18048450 None:intergenic 30.0%
!! TAAATATTTGACTTGGCATC+AGG - Chr1:18048432-18048451 None:intergenic 30.0%
!! TCCGCACATATTTTTAATGT+TGG + Chr1:18047777-18047796 MsG0180001237.01.T01:intron 30.0%
!!! TGATTTTAATTGCAGTCAAG+TGG - Chr1:18046567-18046586 None:intergenic 30.0%
!!! TGCAACATTTTGAAACTTAG+GGG - Chr1:18048527-18048546 None:intergenic 30.0%
AAGGTCAACAAATATTACCC+AGG - Chr1:18049176-18049195 None:intergenic 35.0%
AATGAGAGATTAGAGAGAGA+TGG + Chr1:18051158-18051177 MsG0180001237.01.T01:exon 35.0%
AATTCCAACCTCTACGATAA+AGG + Chr1:18050976-18050995 MsG0180001237.01.T01:CDS 35.0%
AATTTCCAGAGCTCTTCAAA+AGG - Chr1:18046784-18046803 None:intergenic 35.0%
ACAGAATGTGCATCAAATTC+TGG + Chr1:18046824-18046843 MsG0180001237.01.T01:CDS 35.0%
ACAGGTGTAGCAAATTGTAT+GGG - Chr1:18050797-18050816 None:intergenic 35.0%
ACCTCTACGATAAAGGAAAA+TGG + Chr1:18050983-18051002 MsG0180001237.01.T01:CDS 35.0%
ACCTTAACTGAAGTGAACTT+GGG + Chr1:18050947-18050966 MsG0180001237.01.T01:CDS 35.0%
AGAAGGAATGGAACTAACAA+AGG - Chr1:18051332-18051351 None:intergenic 35.0%
AGAGATGGAAAGCTTATCAA+AGG + Chr1:18051173-18051192 MsG0180001237.01.T01:three_prime_UTR 35.0%
AGGAGAAGAAAGGTAAATGA+TGG + Chr1:18046090-18046109 MsG0180001237.01.T01:intron 35.0%
AGTGAAGAAGTTAAATCTGG+TGG + Chr1:18046026-18046045 MsG0180001237.01.T01:CDS 35.0%
ATCTCTCTCTAATCTCTCAT+TGG - Chr1:18051159-18051178 None:intergenic 35.0%
ATGCGTTGTTTGTGAATAGA+AGG - Chr1:18050530-18050549 None:intergenic 35.0%
ATTAACCTCCACGAACATAA+TGG - Chr1:18050305-18050324 None:intergenic 35.0%
ATTATGTTCGTGGAGGTTAA+TGG + Chr1:18050304-18050323 MsG0180001237.01.T01:intron 35.0%
CAAAAACAAAGGGTTTGGAA+TGG - Chr1:18048313-18048332 None:intergenic 35.0%
CCTCTACGATAAAGGAAAAT+GGG + Chr1:18050984-18051003 MsG0180001237.01.T01:CDS 35.0%
CGACATATGTGGTTAACAAA+AGG + Chr1:18048599-18048618 MsG0180001237.01.T01:CDS 35.0%
GAATCATGATGCATGATATG+GGG + Chr1:18050198-18050217 MsG0180001237.01.T01:intron 35.0%
GAATCTGACAGATAAGAATG+TGG + Chr1:18048784-18048803 MsG0180001237.01.T01:intron 35.0%
GACTGTTAAACCACAATGTT+AGG + Chr1:18046178-18046197 MsG0180001237.01.T01:intron 35.0%
GATTGTTTGTGTCAGCATTT+AGG + Chr1:18045696-18045715 MsG0180001237.01.T01:CDS 35.0%
GCCTCATCTTTAAATGTACT+TGG + Chr1:18049853-18049872 MsG0180001237.01.T01:intron 35.0%
GCGATTGTAGATATAGTCAT+AGG + Chr1:18046154-18046173 MsG0180001237.01.T01:intron 35.0%
GGAAGAAAAGGACAATTTCA+AGG + Chr1:18047612-18047631 MsG0180001237.01.T01:CDS 35.0%
GGACGATGACTAATATGATT+CGG - Chr1:18050659-18050678 None:intergenic 35.0%
GGAGAAGAAAGGTAAATGAT+GGG + Chr1:18046091-18046110 MsG0180001237.01.T01:intron 35.0%
GGTCAATTGTATTCAGTTGA+TGG + Chr1:18049481-18049500 MsG0180001237.01.T01:intron 35.0%
GTAACGATCGAAAAACTATG+CGG - Chr1:18050244-18050263 None:intergenic 35.0%
GTAATGAGAAGAAAGGAGTT+TGG - Chr1:18045264-18045283 None:intergenic 35.0%
GTGAAATTGAAGCGAAAAAG+TGG - Chr1:18045384-18045403 None:intergenic 35.0%
GTGAATCATGATGCATGATA+TGG + Chr1:18050196-18050215 MsG0180001237.01.T01:intron 35.0%
GTGAGATCTACGAATGAAAA+GGG - Chr1:18045313-18045332 None:intergenic 35.0%
GTTAGCAATGAGATGTTTGA+TGG + Chr1:18047359-18047378 MsG0180001237.01.T01:CDS 35.0%
GTTGAGTAGTTATCAAAAGG+AGG + Chr1:18047859-18047878 MsG0180001237.01.T01:intron 35.0%
GTTGTTAAGGAGTTTAGGAA+GGG + Chr1:18045885-18045904 MsG0180001237.01.T01:CDS 35.0%
GTTTCATACCATTATGTTCG+TGG + Chr1:18050294-18050313 MsG0180001237.01.T01:intron 35.0%
TAAGAATTTAGACACTGCTG+AGG + Chr1:18046070-18046089 MsG0180001237.01.T01:CDS 35.0%
TACCTTAACTGAAGTGAACT+TGG + Chr1:18050946-18050965 MsG0180001237.01.T01:CDS 35.0%
TACTACACCATGGTTAATCT+TGG + Chr1:18046425-18046444 MsG0180001237.01.T01:intron 35.0%
TAGAGATCCAAGATTAACCA+TGG - Chr1:18046435-18046454 None:intergenic 35.0%
TATTCTGCTGTTCAAGTAAC+CGG + Chr1:18050695-18050714 MsG0180001237.01.T01:CDS 35.0%
TGAACAGCAGAATAATGCTT+GGG - Chr1:18050689-18050708 None:intergenic 35.0%
TGACAAACACAGAAAGATGA+GGG - Chr1:18047061-18047080 None:intergenic 35.0%
TGTGAGATCTACGAATGAAA+AGG - Chr1:18045314-18045333 None:intergenic 35.0%
TTAATGTTGTTGAAGGACTG+AGG + Chr1:18047517-18047536 MsG0180001237.01.T01:CDS 35.0%
TTAGTTGAGTCCCTAGTATT+AGG + Chr1:18049806-18049825 MsG0180001237.01.T01:intron 35.0%
TTCATACACCATGTGCTTAT+AGG + Chr1:18047171-18047190 MsG0180001237.01.T01:intron 35.0%
TTCATGGATGATGAAACACA+AGG - Chr1:18049991-18050010 None:intergenic 35.0%
TTCCTAAACTCCTTAACAAC+CGG - Chr1:18045885-18045904 None:intergenic 35.0%
TTGAACAGCAGAATAATGCT+TGG - Chr1:18050690-18050709 None:intergenic 35.0%
TTGTTCGATTATTTGAGTCG+TGG + Chr1:18046116-18046135 MsG0180001237.01.T01:intron 35.0%
TTTCACTAAATCGCATATCG+CGG - Chr1:18046316-18046335 None:intergenic 35.0%
! AACAAAAGTTTTTCCTGTGG+TGG - Chr1:18047342-18047361 None:intergenic 35.0%
! ACCGGAAATTAAGCATTTTC+CGG + Chr1:18045533-18045552 MsG0180001237.01.T01:CDS 35.0%
! ACTGAATGTGACATGACTTT+TGG + Chr1:18049089-18049108 MsG0180001237.01.T01:CDS 35.0%
! AGAGAGATGGGTTTATGAAT+TGG + Chr1:18045637-18045656 MsG0180001237.01.T01:CDS 35.0%
! ATATGATTCGGAGATCTGTT+TGG - Chr1:18050647-18050666 None:intergenic 35.0%
! ATGGTGTCAATTACGTTTAG+TGG - Chr1:18049545-18049564 None:intergenic 35.0%
! CTGAATGTGACATGACTTTT+GGG + Chr1:18049090-18049109 MsG0180001237.01.T01:CDS 35.0%
! CTTCAGGTTAATGTTGTTGA+AGG + Chr1:18047510-18047529 MsG0180001237.01.T01:intron 35.0%
! GAAGGGAATTTTGTGGTTAA+AGG + Chr1:18045984-18046003 MsG0180001237.01.T01:CDS 35.0%
! GCTAACAAAAGTTTTTCCTG+TGG - Chr1:18047345-18047364 None:intergenic 35.0%
! GCTTATGCAGCAGTATTTTT+CGG + Chr1:18045797-18045816 MsG0180001237.01.T01:CDS 35.0%
! GGGAAGGATGTATAACATTT+TGG + Chr1:18051289-18051308 MsG0180001237.01.T01:three_prime_UTR 35.0%
! TGTCAGCATTTAGGTGTTAT+TGG + Chr1:18045705-18045724 MsG0180001237.01.T01:CDS 35.0%
! TTTTCCTTTATCGTAGAGGT+TGG - Chr1:18050983-18051002 None:intergenic 35.0%
!! CATCGTCGATTTCTATAATG+AGG + Chr1:18048886-18048905 MsG0180001237.01.T01:CDS 35.0%
!! GTACAAGAGTATCAGTATGA+TGG - Chr1:18047258-18047277 None:intergenic 35.0%
!! GTCAGCATTTAGGTGTTATT+GGG + Chr1:18045706-18045725 MsG0180001237.01.T01:CDS 35.0%
!! GTGAAAGTGTTGTCAAATAG+CGG + Chr1:18046330-18046349 MsG0180001237.01.T01:intron 35.0%
!! TCAGCATTTAGGTGTTATTG+GGG + Chr1:18045707-18045726 MsG0180001237.01.T01:CDS 35.0%
!!! ACTATTTTTAGCAGGCCAAA+AGG - Chr1:18046650-18046669 None:intergenic 35.0%
!!! GCAACATTTTGAAACTTAGG+GGG - Chr1:18048526-18048545 None:intergenic 35.0%
!!! GGCATCTGTTTTTAATCTTC+AGG + Chr1:18047494-18047513 MsG0180001237.01.T01:intron 35.0%
!!! TGAGTCGTGGTTTTAAATTG+CGG + Chr1:18046129-18046148 MsG0180001237.01.T01:intron 35.0%
AAAATCATCGTCGTGGTGAA+GGG + Chr1:18045967-18045986 MsG0180001237.01.T01:CDS 40.0%
AAACAATGGCTGCATGCTAT+TGG - Chr1:18050753-18050772 None:intergenic 40.0%
AACAATGGCTGCATGCTATT+GGG - Chr1:18050752-18050771 None:intergenic 40.0%
AACATTTGGCCGTCTTCATT+TGG + Chr1:18049041-18049060 MsG0180001237.01.T01:CDS 40.0%
AAGTCATGTCACATTCAGTC+AGG - Chr1:18049088-18049107 None:intergenic 40.0%
AATCAACAACAGAACGTGAG+TGG + Chr1:18047314-18047333 MsG0180001237.01.T01:CDS 40.0%
AATCGCATATCGCGGAATAA+CGG - Chr1:18046308-18046327 None:intergenic 40.0%
AATGAAGACGGCCAAATGTT+TGG - Chr1:18049041-18049060 None:intergenic 40.0%
AATGGGAAATGCAGTAACAC+CGG + Chr1:18045515-18045534 MsG0180001237.01.T01:CDS 40.0%
AATTGTATGGGAGTTGCAAC+TGG - Chr1:18050785-18050804 None:intergenic 40.0%
ACATTTGTGTATGCCAAGCA+GGG + Chr1:18047970-18047989 MsG0180001237.01.T01:intron 40.0%
ACCATTCAACGCCAAACATT+TGG + Chr1:18049027-18049046 MsG0180001237.01.T01:CDS 40.0%
ACCCAAGTTCACTTCAGTTA+AGG - Chr1:18050951-18050970 None:intergenic 40.0%
ACTCTCTTCCTATAAGCACA+TGG - Chr1:18047182-18047201 None:intergenic 40.0%
AGCAAGTAATGTTCGGACTT+CGG + Chr1:18047028-18047047 MsG0180001237.01.T01:intron 40.0%
AGCAATGTCAAGCTTTCTCT+TGG + Chr1:18049149-18049168 MsG0180001237.01.T01:CDS 40.0%
AGCAGCAACATCAACAACAA+TGG + Chr1:18045604-18045623 MsG0180001237.01.T01:CDS 40.0%
AGTGTAGAAAATCATCGTCG+TGG + Chr1:18045960-18045979 MsG0180001237.01.T01:CDS 40.0%
AGTTATCAAAGGGAGGTCTA+TGG + Chr1:18047904-18047923 MsG0180001237.01.T01:intron 40.0%
ATACTGCAAAGGAGAGAACA+AGG + Chr1:18051268-18051287 MsG0180001237.01.T01:three_prime_UTR 40.0%
ATGAGAAGAAAGGAGTTTGG+TGG - Chr1:18045261-18045280 None:intergenic 40.0%
ATGTTTGATGGGAAGATGGT+AGG + Chr1:18047371-18047390 MsG0180001237.01.T01:intron 40.0%
ATTCTGCTGTTCAAGTAACC+GGG + Chr1:18050696-18050715 MsG0180001237.01.T01:CDS 40.0%
ATTGGGCCCCAAAAAAATTG+AGG - Chr1:18048035-18048054 None:intergenic 40.0%
ATTTCCCTTGCATCACTAGA+AGG - Chr1:18050481-18050500 None:intergenic 40.0%
CAAAATGTAAAGAGCGGCAA+CGG + Chr1:18051232-18051251 MsG0180001237.01.T01:three_prime_UTR 40.0%
CACAGGTGTAGCAAATTGTA+TGG - Chr1:18050798-18050817 None:intergenic 40.0%
CATCTTTCTGTGTTTGTCAC+AGG + Chr1:18047062-18047081 MsG0180001237.01.T01:intron 40.0%
CGCCGCTATTTGAAAATACT+CGG - Chr1:18046256-18046275 None:intergenic 40.0%
CTTGACATGAGTTCAAGTAC+TGG + Chr1:18048170-18048189 MsG0180001237.01.T01:intron 40.0%
GAACAGGCTATAGAGGAAAA+AGG + Chr1:18051106-18051125 MsG0180001237.01.T01:CDS 40.0%
GAATAATGCTTGGGAGCTAA+CGG - Chr1:18050680-18050699 None:intergenic 40.0%
GAATGTGCATCAAATTCTGG+AGG + Chr1:18046827-18046846 MsG0180001237.01.T01:CDS 40.0%
GCCGGAAAATGCTTAATTTC+CGG - Chr1:18045537-18045556 None:intergenic 40.0%
GGAAGAGAGATGATTCAGTT+GGG + Chr1:18048637-18048656 MsG0180001237.01.T01:CDS 40.0%
GGAATGGAACTAACAAAGGA+AGG - Chr1:18051328-18051347 None:intergenic 40.0%
GGGTACAAAAACAAAGGGTT+TGG - Chr1:18048318-18048337 None:intergenic 40.0%
GGTGAGTATGATCATGTTGT+TGG + Chr1:18045735-18045754 MsG0180001237.01.T01:CDS 40.0%
GGTTGTTAAGGAGTTTAGGA+AGG + Chr1:18045884-18045903 MsG0180001237.01.T01:CDS 40.0%
GTATGAAAGCTAGCAAGCAA+GGG - Chr1:18047158-18047177 None:intergenic 40.0%
GTCAATGATTTAAGGGTTGC+TGG + Chr1:18047591-18047610 MsG0180001237.01.T01:CDS 40.0%
GTGACAAACACAGAAAGATG+AGG - Chr1:18047062-18047081 None:intergenic 40.0%
GTTAAATCTGGTGGCAAAGT+TGG + Chr1:18046035-18046054 MsG0180001237.01.T01:CDS 40.0%
GTTAACAAAAGGCCCATAAG+AGG + Chr1:18048610-18048629 MsG0180001237.01.T01:CDS 40.0%
TACATTTGTGTATGCCAAGC+AGG + Chr1:18047969-18047988 MsG0180001237.01.T01:intron 40.0%
TACTGCAAAGGAGAGAACAA+GGG + Chr1:18051269-18051288 MsG0180001237.01.T01:three_prime_UTR 40.0%
TAGGAAGAGAGTCACCTTAT+AGG + Chr1:18047190-18047209 MsG0180001237.01.T01:intron 40.0%
TATGCAATGGTCAATGTGTG+TGG + Chr1:18047736-18047755 MsG0180001237.01.T01:intron 40.0%
TCAAGATATCATTGAGCGCA+TGG + Chr1:18048826-18048845 MsG0180001237.01.T01:CDS 40.0%
TCATACCATTATGTTCGTGG+AGG + Chr1:18050297-18050316 MsG0180001237.01.T01:intron 40.0%
TCTCTTCCATGTCCTCTTAT+GGG - Chr1:18048625-18048644 None:intergenic 40.0%
TGAAACACAAGGTCTCTTCA+TGG - Chr1:18049980-18049999 None:intergenic 40.0%
TGAAGTTGAACAGGCTATAG+AGG + Chr1:18051099-18051118 MsG0180001237.01.T01:CDS 40.0%
TGAGATGTTTGATGGGAAGA+TGG + Chr1:18047367-18047386 MsG0180001237.01.T01:CDS 40.0%
TGAGTCCCTAGTATTAGGTA+GGG + Chr1:18049811-18049830 MsG0180001237.01.T01:intron 40.0%
TGGAAGAGAGATGATTCAGT+TGG + Chr1:18048636-18048655 MsG0180001237.01.T01:CDS 40.0%
TGGTGGCAAAGTTGGATATA+AGG + Chr1:18046043-18046062 MsG0180001237.01.T01:CDS 40.0%
TGTATGAAAGCTAGCAAGCA+AGG - Chr1:18047159-18047178 None:intergenic 40.0%
TGTTGTCAAATAGCGGCTAT+AGG + Chr1:18046337-18046356 MsG0180001237.01.T01:intron 40.0%
TTAAGGAGTTTAGGAAGGGT+AGG + Chr1:18045889-18045908 MsG0180001237.01.T01:CDS 40.0%
TTAAGGGTTGCTGGAAGAAA+AGG + Chr1:18047600-18047619 MsG0180001237.01.T01:CDS 40.0%
TTCGATCGTTACTCGATACT+AGG + Chr1:18050252-18050271 MsG0180001237.01.T01:intron 40.0%
TTGAGTCCCTAGTATTAGGT+AGG + Chr1:18049810-18049829 MsG0180001237.01.T01:intron 40.0%
TTTCCCTTGCATCACTAGAA+GGG - Chr1:18050480-18050499 None:intergenic 40.0%
! ACATTTGTCTCAGAGCACTT+TGG + Chr1:18049116-18049135 MsG0180001237.01.T01:CDS 40.0%
! AGTTTTCATGGCAATGCCAA+TGG + Chr1:18045497-18045516 MsG0180001237.01.T01:intron 40.0%
! ATGGTGTTAGTTACGCTTAG+TGG - Chr1:18049630-18049649 None:intergenic 40.0%
! ATTTGTCTCAGAGCACTTTG+GGG + Chr1:18049118-18049137 MsG0180001237.01.T01:CDS 40.0%
! CAAGAATGCAATGGTAATGC+AGG + Chr1:18051070-18051089 MsG0180001237.01.T01:CDS 40.0%
! CATTTGTCTCAGAGCACTTT+GGG + Chr1:18049117-18049136 MsG0180001237.01.T01:CDS 40.0%
! CCCATTTTCCTTTATCGTAG+AGG - Chr1:18050987-18051006 None:intergenic 40.0%
! CTTAACAGACATGACTTGTG+AGG - Chr1:18048855-18048874 None:intergenic 40.0%
! GAAAAGGGAAAGTGTGAAGA+TGG - Chr1:18045298-18045317 None:intergenic 40.0%
! GGAAATTAAGCATTTTCCGG+CGG + Chr1:18045536-18045555 MsG0180001237.01.T01:CDS 40.0%
! GTCAGGAAAAGCGTATAAAC+AGG - Chr1:18049071-18049090 None:intergenic 40.0%
! GTTTTCATGGCAATGCCAAT+GGG + Chr1:18045498-18045517 MsG0180001237.01.T01:intron 40.0%
!! AAGAGCTCTGGAAATTCTCA+AGG + Chr1:18046788-18046807 MsG0180001237.01.T01:CDS 40.0%
!! ATGTAGTTTGCTGTGAAGAC+TGG + Chr1:18047217-18047236 MsG0180001237.01.T01:intron 40.0%
!! GCAGTATTTTTCGGTTAACG+AGG + Chr1:18045806-18045825 MsG0180001237.01.T01:CDS 40.0%
!! GGTTTGTTGATGAGAGAGAT+GGG + Chr1:18045625-18045644 MsG0180001237.01.T01:CDS 40.0%
!! TGGTTTGTTGATGAGAGAGA+TGG + Chr1:18045624-18045643 MsG0180001237.01.T01:CDS 40.0%
!! TTTTTAGCACAAACGACGAC+AGG - Chr1:18048266-18048285 None:intergenic 40.0%
!! TTTTTAGCAGGCCAAAAGGT+CGG - Chr1:18046646-18046665 None:intergenic 40.0%
!!! ACACCGTGCCTCAATTTTTT+TGG + Chr1:18048024-18048043 MsG0180001237.01.T01:intron 40.0%
!!! ACCGTGCCTCAATTTTTTTG+GGG + Chr1:18048026-18048045 MsG0180001237.01.T01:intron 40.0%
!!! CACCGTGCCTCAATTTTTTT+GGG + Chr1:18048025-18048044 MsG0180001237.01.T01:intron 40.0%
!!! TCACTTGGCAGAGACTTTTT+TGG - Chr1:18050578-18050597 None:intergenic 40.0%
AAAAGGCCCATAAGAGGACA+TGG + Chr1:18048616-18048635 MsG0180001237.01.T01:CDS 45.0%
AAACGACGACAGGCCTATAT+GGG - Chr1:18048256-18048275 None:intergenic 45.0%
AAATCGACGATGCAAGCATC+AGG - Chr1:18048878-18048897 None:intergenic 45.0%
AATGTGACAGCGTCGTTCAA+AGG + Chr1:18048682-18048701 MsG0180001237.01.T01:CDS 45.0%
ACAGGCCTTCCAAATGAAGA+CGG - Chr1:18049053-18049072 None:intergenic 45.0%
ACATTGTCCACGTCAGCAAT+TGG - Chr1:18048667-18048686 None:intergenic 45.0%
ACTGAAGTGAACTTGGGTGT+TGG + Chr1:18050953-18050972 MsG0180001237.01.T01:CDS 45.0%
ACTGTGTGACCCTAACATTG+TGG - Chr1:18046191-18046210 None:intergenic 45.0%
AGCCGGTTGTTAAGGAGTTT+AGG + Chr1:18045880-18045899 MsG0180001237.01.T01:CDS 45.0%
AGGTGCAACTGAAGTTGAAC+AGG + Chr1:18051090-18051109 MsG0180001237.01.T01:CDS 45.0%
AGTTTAGGAAGGGTAGGCAA+TGG + Chr1:18045895-18045914 MsG0180001237.01.T01:CDS 45.0%
CGTTGAACACCAGAAAGTCA+TGG - Chr1:18049390-18049409 None:intergenic 45.0%
CTCTCTTCCATGTCCTCTTA+TGG - Chr1:18048626-18048645 None:intergenic 45.0%
GAAAATCATCGTCGTGGTGA+AGG + Chr1:18045966-18045985 MsG0180001237.01.T01:CDS 45.0%
GACCAATGTGAAGTTGCTGA+CGG - Chr1:18050617-18050636 None:intergenic 45.0%
GAGTGAAATCATAGGATGCG+TGG + Chr1:18048114-18048133 MsG0180001237.01.T01:intron 45.0%
GCCCCAAAAAAATTGAGGCA+CGG - Chr1:18048030-18048049 None:intergenic 45.0%
GCTATTGGGAGCAACATGTA+GGG - Chr1:18050738-18050757 None:intergenic 45.0%
GGCTATAGGCTGTGAAATTG+CGG + Chr1:18046351-18046370 MsG0180001237.01.T01:intron 45.0%
GGGTGAGTACATGGGAAATT+TGG + Chr1:18048946-18048965 MsG0180001237.01.T01:intron 45.0%
GTGTGTGGCAAACACTTGAT+AGG + Chr1:18047751-18047770 MsG0180001237.01.T01:intron 45.0%
GTTTGTGAAGCCGGTTGTTA+AGG + Chr1:18045872-18045891 MsG0180001237.01.T01:CDS 45.0%
TCAAGCTTTCTCTTGGACCT+GGG + Chr1:18049156-18049175 MsG0180001237.01.T01:CDS 45.0%
TGAAATCATAGGATGCGTGG+TGG + Chr1:18048117-18048136 MsG0180001237.01.T01:intron 45.0%
TGCAATTCGGAGACCATTGT+AGG + Chr1:18046541-18046560 MsG0180001237.01.T01:intron 45.0%
TGCTATTGGGAGCAACATGT+AGG - Chr1:18050739-18050758 None:intergenic 45.0%
TTCAGCAGAGGAGGGTTAAT+TGG + Chr1:18045763-18045782 MsG0180001237.01.T01:CDS 45.0%
TTCTGCTGTTCAAGTAACCG+GGG + Chr1:18050697-18050716 MsG0180001237.01.T01:CDS 45.0%
TTGGATTCGTAGCGAATTCG+CGG + Chr1:18045656-18045675 MsG0180001237.01.T01:CDS 45.0%
TTGTTGGTGCAATTCAGCAG+AGG + Chr1:18045751-18045770 MsG0180001237.01.T01:CDS 45.0%
TTTGGCCGTCTTCATTTGGA+AGG + Chr1:18049045-18049064 MsG0180001237.01.T01:CDS 45.0%
! AAGGGAAAGTGTGAAGATGG+TGG - Chr1:18045295-18045314 None:intergenic 45.0%
! AATTAAGCATTTTCCGGCGG+TGG + Chr1:18045539-18045558 MsG0180001237.01.T01:CDS 45.0%
! ATACACGACTTCCGACCTTT+TGG + Chr1:18046632-18046651 MsG0180001237.01.T01:intron 45.0%
! ATTCGGAGATCTGTTTGGTG+CGG - Chr1:18050642-18050661 None:intergenic 45.0%
! CAGTGTCGGAGTGAAATCAT+AGG + Chr1:18048106-18048125 MsG0180001237.01.T01:intron 45.0%
! GCCAAATGTTTGGCGTTGAA+TGG - Chr1:18049031-18049050 None:intergenic 45.0%
! TCGTGGTGAAGGGAATTTTG+TGG + Chr1:18045977-18045996 MsG0180001237.01.T01:CDS 45.0%
!! ACATGAGTTCAAGTACTGGC+AGG + Chr1:18048174-18048193 MsG0180001237.01.T01:intron 45.0%
!! GGTGTTACTGCATTTCCCAT+TGG - Chr1:18045516-18045535 None:intergenic 45.0%
!! TTAGGTGTTATTGGGGAGAG+TGG + Chr1:18045714-18045733 MsG0180001237.01.T01:CDS 45.0%
!! ATTGAAAAAAAAAAAAAAAT+TGG - Chr1:18048053-18048072 None:intergenic 5.0%
!! TTGAAAAAAAAAAAAAAATT+GGG - Chr1:18048052-18048071 None:intergenic 5.0%
!!! ATCTTTTATATTTTATTTTA+TGG + Chr1:18047471-18047490 MsG0180001237.01.T01:intron 5.0%
!!! TATGTTTTTTTTTTTTTTTT+TGG + Chr1:18048919-18048938 MsG0180001237.01.T01:intron 5.0%
!!! TCTTTTATATTTTATTTTAT+GGG + Chr1:18047472-18047491 MsG0180001237.01.T01:intron 5.0%
AACAGGGAGTCCGACATATG+TGG + Chr1:18048588-18048607 MsG0180001237.01.T01:intron 50.0%
AACTCATCTCAGCACTCGCA+AGG + Chr1:18050923-18050942 MsG0180001237.01.T01:CDS 50.0%
AATGGCAGAGGTTTGAGGGT+GGG + Chr1:18045913-18045932 MsG0180001237.01.T01:CDS 50.0%
AATGTAAAGAGCGGCAACGG+TGG + Chr1:18051235-18051254 MsG0180001237.01.T01:three_prime_UTR 50.0%
AGGCAATGGCAGAGGTTTGA+GGG + Chr1:18045909-18045928 MsG0180001237.01.T01:CDS 50.0%
AGGGTGGGAATGGTAAGGAA+GGG + Chr1:18045928-18045947 MsG0180001237.01.T01:CDS 50.0%
AGGTCCCTTCTAGTGATGCA+AGG + Chr1:18050473-18050492 MsG0180001237.01.T01:intron 50.0%
CAAACGACGACAGGCCTATA+TGG - Chr1:18048257-18048276 None:intergenic 50.0%
CAAGGTCTCTTCATGGTGCA+TGG - Chr1:18049973-18049992 None:intergenic 50.0%
CTCCGTCAGCAACTTCACAT+TGG + Chr1:18050612-18050631 MsG0180001237.01.T01:CDS 50.0%
GACACTGCTGAGGAGAAGAA+AGG + Chr1:18046080-18046099 MsG0180001237.01.T01:CDS 50.0%
GCAAAGGAGAGAACAAGGGA+AGG + Chr1:18051273-18051292 MsG0180001237.01.T01:three_prime_UTR 50.0%
GCAAGACCTTGAGCATCACT+TGG - Chr1:18050593-18050612 None:intergenic 50.0%
GGTCCCTTCTAGTGATGCAA+GGG + Chr1:18050474-18050493 MsG0180001237.01.T01:intron 50.0%
GTCAAGCTTTCTCTTGGACC+TGG + Chr1:18049155-18049174 MsG0180001237.01.T01:CDS 50.0%
GTTTGAGGGTGGGAATGGTA+AGG + Chr1:18045923-18045942 MsG0180001237.01.T01:CDS 50.0%
TAGGCAATGGCAGAGGTTTG+AGG + Chr1:18045908-18045927 MsG0180001237.01.T01:CDS 50.0%
TCTCTGCCAAGTGATGCTCA+AGG + Chr1:18050584-18050603 MsG0180001237.01.T01:CDS 50.0%
TGAGATGAGTTAGCAGAGCC+AGG - Chr1:18050914-18050933 None:intergenic 50.0%
TGATGTTGCTGCTGTTGCTG+TGG - Chr1:18045597-18045616 None:intergenic 50.0%
TGCAGTCAAGTGGCCTACAA+TGG - Chr1:18046557-18046576 None:intergenic 50.0%
TGGTCTGTACTGCATCTCAC+CGG - Chr1:18045571-18045590 None:intergenic 50.0%
TGGTGCAATTCAGCAGAGGA+GGG + Chr1:18045755-18045774 MsG0180001237.01.T01:CDS 50.0%
TTGGAAGGGGGTGAGTACAT+GGG + Chr1:18048938-18048957 MsG0180001237.01.T01:intron 50.0%
TTGGGAGCAACATGTAGGGA+TGG - Chr1:18050734-18050753 None:intergenic 50.0%
TTGGTGCAATTCAGCAGAGG+AGG + Chr1:18045754-18045773 MsG0180001237.01.T01:CDS 50.0%
TTTGGAAGGGGGTGAGTACA+TGG + Chr1:18048937-18048956 MsG0180001237.01.T01:intron 50.0%
!! GATGGCCTTTTGAAGAGCTC+TGG + Chr1:18046776-18046795 MsG0180001237.01.T01:CDS 50.0%
!! TTCGGAGATCTGTTTGGTGC+GGG - Chr1:18050641-18050660 None:intergenic 50.0%
AACGTGAGTGGTTCCACCAC+AGG + Chr1:18047326-18047345 MsG0180001237.01.T01:CDS 55.0%
ACAGTCCATCCTGTAGAGCC+AGG - Chr1:18050830-18050849 None:intergenic 55.0%
CAATGGCAGAGGTTTGAGGG+TGG + Chr1:18045912-18045931 MsG0180001237.01.T01:CDS 55.0%
CAGAGGTTTGAGGGTGGGAA+TGG + Chr1:18045918-18045937 MsG0180001237.01.T01:CDS 55.0%
GAGGGTGGGAATGGTAAGGA+AGG + Chr1:18045927-18045946 MsG0180001237.01.T01:CDS 55.0%
GATGAGTTAGCAGAGCCAGG+CGG - Chr1:18050911-18050930 None:intergenic 55.0%
GCAACATGTAGGGATGGAGC+CGG - Chr1:18050728-18050747 None:intergenic 55.0%
GCAGCAGAGGTTTGTGAAGC+CGG + Chr1:18045863-18045882 MsG0180001237.01.T01:CDS 55.0%
GGGTGTTCCAATTGCTGACG+TGG + Chr1:18048657-18048676 MsG0180001237.01.T01:CDS 55.0%
GTGTTATAGCCCAGCCTCGA+CGG - Chr1:18048008-18048027 None:intergenic 55.0%
TCTGTACTGCATCTCACCGG+CGG - Chr1:18045568-18045587 None:intergenic 55.0%
TGACAGCGTCGTTCAAAGGC+AGG + Chr1:18048686-18048705 MsG0180001237.01.T01:intron 55.0%
TGTTATAGCCCAGCCTCGAC+GGG - Chr1:18048007-18048026 None:intergenic 55.0%
TGTTGCTGCTGTTGCTGTGG+TGG - Chr1:18045594-18045613 None:intergenic 55.0%
TTGTGTATGCCAAGCAGGGC+CGG + Chr1:18047974-18047993 MsG0180001237.01.T01:intron 55.0%
! ACTGGCGCTGGGACAAACAA+TGG - Chr1:18050767-18050786 None:intergenic 55.0%
!! TGGCTCTACAGGATGGACTG+TGG + Chr1:18050829-18050848 MsG0180001237.01.T01:CDS 55.0%
ACAGGAGTCTTCCTTCCGCC+TGG + Chr1:18050893-18050912 MsG0180001237.01.T01:CDS 60.0%
ACTCGAGGAGGAGGATGCCT+TGG - Chr1:18050860-18050879 None:intergenic 60.0%
AGTTAGCAGAGCCAGGCGGA+AGG - Chr1:18050907-18050926 None:intergenic 60.0%
ATGGGAGTTGCAACTGGCGC+TGG - Chr1:18050779-18050798 None:intergenic 60.0%
CCTCCTCGAGTCGTTGTTCC+CGG + Chr1:18050869-18050888 MsG0180001237.01.T01:CDS 60.0%
CGGAAGGAAGACTCCTGTGC+CGG - Chr1:18050891-18050910 None:intergenic 60.0%
GGAACAACGACTCGAGGAGG+AGG - Chr1:18050869-18050888 None:intergenic 60.0%
GGAAGGAAGACTCCTGTGCC+GGG - Chr1:18050890-18050909 None:intergenic 60.0%
GGAAGGGTAGGCAATGGCAG+AGG + Chr1:18045901-18045920 MsG0180001237.01.T01:CDS 60.0%
GTCCATCCTGTAGAGCCAGG+CGG - Chr1:18050827-18050846 None:intergenic 60.0%
TAGGATGCGTGGTGGTCCAG+TGG + Chr1:18048125-18048144 MsG0180001237.01.T01:intron 60.0%
TCCATCCTGTAGAGCCAGGC+GGG - Chr1:18050826-18050845 None:intergenic 60.0%
TGCTGCTGTTGCTGTGGTGG+TGG - Chr1:18045591-18045610 None:intergenic 60.0%
TGGGAGTTGCAACTGGCGCT+GGG - Chr1:18050778-18050797 None:intergenic 60.0%
!! GATGGACTGTGGCTCCTCCA+AGG + Chr1:18050840-18050859 MsG0180001237.01.T01:CDS 60.0%
!! TCAAGTAACCGGGGTGCTGC+CGG + Chr1:18050706-18050725 MsG0180001237.01.T01:CDS 60.0%
ACACCTGTGCCAATCCCGCC+TGG + Chr1:18050809-18050828 MsG0180001237.01.T01:CDS 65.0%
CCGGGAACAACGACTCGAGG+AGG - Chr1:18050872-18050891 None:intergenic 65.0%
CCTGTAGAGCCAGGCGGGAT+TGG - Chr1:18050821-18050840 None:intergenic 65.0%
CGAGGAGGAGGATGCCTTGG+AGG - Chr1:18050857-18050876 None:intergenic 65.0%
CGAGTCGTTGTTCCCGGCAC+AGG + Chr1:18050875-18050894 MsG0180001237.01.T01:CDS 65.0%
GGTTGCGTACGCGTTGCAGC+AGG + Chr1:18045827-18045846 MsG0180001237.01.T01:CDS 65.0%
GTGCCGGGAACAACGACTCG+AGG - Chr1:18050875-18050894 None:intergenic 65.0%
TGCGTACGCGTTGCAGCAGG+TGG + Chr1:18045830-18045849 MsG0180001237.01.T01:CDS 65.0%
TTTCCGGCGGTGGTTACCGC+CGG + Chr1:18045549-18045568 MsG0180001237.01.T01:CDS 65.0%
!! CCAATCCCGCCTGGCTCTAC+AGG + Chr1:18050818-18050837 MsG0180001237.01.T01:CDS 65.0%
!! TCCCGCCTGGCTCTACAGGA+TGG + Chr1:18050822-18050841 MsG0180001237.01.T01:CDS 65.0%
ACGCGTTGCAGCAGGTGGCG+TGG + Chr1:18045835-18045854 MsG0180001237.01.T01:CDS 70.0%
CGTTGCAGCAGGTGGCGTGG+AGG + Chr1:18045838-18045857 MsG0180001237.01.T01:CDS 70.0%
GCCCATAGCCCGTCGAGGCT+GGG + Chr1:18047996-18048015 MsG0180001237.01.T01:intron 70.0%
TCACCGGCGGTAACCACCGC+CGG - Chr1:18045555-18045574 None:intergenic 70.0%
TGCAGCAGGTGGCGTGGAGG+CGG + Chr1:18045841-18045860 MsG0180001237.01.T01:CDS 70.0%
! GAGCCAGGCGGGATTGGCAC+AGG - Chr1:18050815-18050834 None:intergenic 70.0%
!! AGCCCAGCCTCGACGGGCTA+TGG - Chr1:18048001-18048020 None:intergenic 70.0%
!! AGCCTCGACGGGCTATGGGC+CGG - Chr1:18047996-18048015 None:intergenic 70.0%
!! GCCCAGCCTCGACGGGCTAT+GGG - Chr1:18048000-18048019 None:intergenic 70.0%
GGATGGAGCCGGCAGCACCC+CGG - Chr1:18050717-18050736 None:intergenic 75.0%
GGCCCATAGCCCGTCGAGGC+TGG + Chr1:18047995-18048014 MsG0180001237.01.T01:intron 75.0%
GGCTATGGGCCGGCCCTGCT+TGG - Chr1:18047986-18048005 None:intergenic 75.0%
TGGCGTGGAGGCGGCAGCAG+AGG + Chr1:18045850-18045869 MsG0180001237.01.T01:CDS 75.0%
! GGCCGGCCCATAGCCCGTCG+AGG + Chr1:18047991-18048010 MsG0180001237.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 18045253 18051429 18045253 ID=MsG0180001237.01;Name=MsG0180001237.01
Chr1 mRNA 18045253 18051429 18045253 ID=MsG0180001237.01.T01;Parent=MsG0180001237.01;Name=MsG0180001237.01.T01;_AED=0.36;_eAED=0.36;_QI=251|1|1|1|0.71|0.75|8|267|658
Chr1 exon 18046753 18046848 18046753 ID=MsG0180001237.01.T01:exon:32354;Parent=MsG0180001237.01.T01
Chr1 exon 18048593 18048703 18048593 ID=MsG0180001237.01.T01:exon:32357;Parent=MsG0180001237.01.T01
Chr1 exon 18048795 18048907 18048795 ID=MsG0180001237.01.T01:exon:32358;Parent=MsG0180001237.01.T01
Chr1 exon 18049023 18049177 18049023 ID=MsG0180001237.01.T01:exon:32359;Parent=MsG0180001237.01.T01
Chr1 exon 18050475 18051429 18050475 ID=MsG0180001237.01.T01:exon:32360;Parent=MsG0180001237.01.T01
Chr1 five_prime_UTR 18045253 18045503 18045253 ID=MsG0180001237.01.T01:five_prime_utr;Parent=MsG0180001237.01.T01
Chr1 CDS 18045504 18046101 18045504 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18046753 18046848 18046753 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18047291 18047388 18047291 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18047516 18047633 18047516 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18048593 18048703 18048593 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18048795 18048907 18048795 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18049023 18049177 18049023 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 CDS 18050475 18051162 18050475 ID=MsG0180001237.01.T01:cds;Parent=MsG0180001237.01.T01
Chr1 three_prime_UTR 18051163 18051429 18051163 ID=MsG0180001237.01.T01:three_prime_utr;Parent=MsG0180001237.01.T01
Chr1 mRNA 18045253 18048798 18045253 ID=MsG0180001237.01.T02;Parent=MsG0180001237.01;Name=MsG0180001237.01.T02;_AED=0.42;_eAED=0.51;_QI=251|0.6|0.5|1|0.8|0.83|6|0|420
Chr1 exon 18046524 18046667 18046524 ID=MsG0180001237.01.T02:exon:32361;Parent=MsG0180001237.01.T02
Chr1 exon 18046750 18046848 18046750 ID=MsG0180001237.01.T02:exon:32362;Parent=MsG0180001237.01.T02
Chr1 exon 18048593 18048798 18048593 ID=MsG0180001237.01.T02:exon:32363;Parent=MsG0180001237.01.T02
Chr1 five_prime_UTR 18045253 18045503 18045253 ID=MsG0180001237.01.T02:five_prime_utr;Parent=MsG0180001237.01.T02
Chr1 CDS 18045504 18046101 18045504 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Chr1 CDS 18046524 18046667 18046524 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Chr1 CDS 18046750 18046848 18046750 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Chr1 CDS 18047291 18047388 18047291 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Chr1 CDS 18047516 18047633 18047516 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Chr1 CDS 18048593 18048798 18048593 ID=MsG0180001237.01.T02:cds;Parent=MsG0180001237.01.T02
Gene Sequence

>MsG0180001237.01.T02

ATGGCAATGCCAATGGGAAATGCAGTAACACCGGAAATTAAGCATTTTCCGGCGGTGGTTACCGCCGGTGAGATGCAGTACAGACCACCACCACAGCAACAGCAGCAACATCAACAACAATGGTTTGTTGATGAGAGAGATGGGTTTATGAATTGGATTCGTAGCGAATTCGCGGCTGCGAATGCTATTATTGATTGTTTGTGTCAGCATTTAGGTGTTATTGGGGAGAGTGGTGAGTATGATCATGTTGTTGGTGCAATTCAGCAGAGGAGGGTTAATTGGAATCAAGTGTTGCTTATGCAGCAGTATTTTTCGGTTAACGAGGTTGCGTACGCGTTGCAGCAGGTGGCGTGGAGGCGGCAGCAGAGGTTTGTGAAGCCGGTTGTTAAGGAGTTTAGGAAGGGTAGGCAATGGCAGAGGTTTGAGGGTGGGAATGGTAAGGAAGGGAGTAATTCTAGTGTAGAAAATCATCGTCGTGGTGAAGGGAATTTTGTGGTTAAAGGGTCTCAAGTAGTTGATAAGAGTGAAGAAGTTAAATCTGGTGGCAAAGTTGGATATAAGGATGATAAGAATTTAGACACTGCTGAGGAGAAGAAAGTTTTAATGGTTTTAAATTGCAATTCGGAGACCATTGTAGGCCACTTGACTGCAATTAAAATCATGATGTGCATTATACTACATTACTGTGAATATTGTTTATCTGTATATACACGACTTCCGACCTTTTGGCCTGCTAAAAATACAGATGCTATAAAAAATCATCAATCTGATGGCCTTTTGAAGAGCTCTGGAAATTCTCAAGGATCTCTGTCAAGCACAGAATGTGCATCAAATTCTGGAGAAAATGATTCACATTCTATGCAAAATCAACAACAGAACGTGAGTGGTTCCACCACAGGAAAAACTTTTGTTAGCAATGAGATGTTTGATGGGAAGATGGTTAATGTTGTTGAAGGACTGAGGTTGTACGAAGATTTATTTAATAGTACTGAAGTTTCAAAACTTGGTTCATTGGTCAATGATTTAAGGGTTGCTGGAAGAAAAGGACAATTTCAAGGGAGTCCGACATATGTGGTTAACAAAAGGCCCATAAGAGGACATGGAAGAGAGATGATTCAGTTGGGTGTTCCAATTGCTGACGTGGACAATGTGACAGCGTCGTTCAAAGGCAGGTTTTCTATCTCACATACACAGTTTGTAGCCACATTCCCTACTTCTATAATAATGACCAATGAAGTTTCACTAAATGAATCTGACAGATAA

>MsG0180001237.01.T01

ATGGCAATGCCAATGGGAAATGCAGTAACACCGGAAATTAAGCATTTTCCGGCGGTGGTTACCGCCGGTGAGATGCAGTACAGACCACCACCACAGCAACAGCAGCAACATCAACAACAATGGTTTGTTGATGAGAGAGATGGGTTTATGAATTGGATTCGTAGCGAATTCGCGGCTGCGAATGCTATTATTGATTGTTTGTGTCAGCATTTAGGTGTTATTGGGGAGAGTGGTGAGTATGATCATGTTGTTGGTGCAATTCAGCAGAGGAGGGTTAATTGGAATCAAGTGTTGCTTATGCAGCAGTATTTTTCGGTTAACGAGGTTGCGTACGCGTTGCAGCAGGTGGCGTGGAGGCGGCAGCAGAGGTTTGTGAAGCCGGTTGTTAAGGAGTTTAGGAAGGGTAGGCAATGGCAGAGGTTTGAGGGTGGGAATGGTAAGGAAGGGAGTAATTCTAGTGTAGAAAATCATCGTCGTGGTGAAGGGAATTTTGTGGTTAAAGGGTCTCAAGTAGTTGATAAGAGTGAAGAAGTTAAATCTGGTGGCAAAGTTGGATATAAGGATGATAAGAATTTAGACACTGCTGAGGAGAAGAAAGATGCTATAAAAAATCATCAATCTGATGGCCTTTTGAAGAGCTCTGGAAATTCTCAAGGATCTCTGTCAAGCACAGAATGTGCATCAAATTCTGGAGAAAATGATTCACATTCTATGCAAAATCAACAACAGAACGTGAGTGGTTCCACCACAGGAAAAACTTTTGTTAGCAATGAGATGTTTGATGGGAAGATGGTTAATGTTGTTGAAGGACTGAGGTTGTACGAAGATTTATTTAATAGTACTGAAGTTTCAAAACTTGGTTCATTGGTCAATGATTTAAGGGTTGCTGGAAGAAAAGGACAATTTCAAGGGAGTCCGACATATGTGGTTAACAAAAGGCCCATAAGAGGACATGGAAGAGAGATGATTCAGTTGGGTGTTCCAATTGCTGACGTGGACAATGTGACAGCGTCGTTCAAAGATAAGAATGTGGAATCTATGCCTTCCTTGTTTCAAGATATCATTGAGCGCATGGCTGCCTCACAAGTCATGTCTGTTAAGCCTGATGCTTGCATCGTCGATTTCTATAATGAGGGTGACCATTCAACGCCAAACATTTGGCCGTCTTCATTTGGAAGGCCTGTTTATACGCTTTTCCTGACTGAATGTGACATGACTTTTGGGAGAACATTTGTCTCAGAGCACTTTGGGGATTATAAAAGCAATGTCAAGCTTTCTCTTGGACCTGGGTCCCTTCTAGTGATGCAAGGGAAATCAGCTGATTTTGCGAAACATGCTATTCCTTCTATTCACAAACAACGCATTCTTGTTACTTTTGCAAAGTCTCAACCAAAAAAGTCTCTGCCAAGTGATGCTCAAGGTCTTGCTCCGTCAGCAACTTCACATTGGTCACCCGCACCAAACAGATCTCCGAATCATATTAGTCATCGTCCGTTAGCTCCCAAGCATTATTCTGCTGTTCAAGTAACCGGGGTGCTGCCGGCTCCATCCCTACATGTTGCTCCCAATAGCATGCAGCCATTGTTTGTCCCAGCGCCAGTTGCAACTCCCATACAATTTGCTACACCTGTGCCAATCCCGCCTGGCTCTACAGGATGGACTGTGGCTCCTCCAAGGCATCCTCCTCCTCGAGTCGTTGTTCCCGGCACAGGAGTCTTCCTTCCGCCTGGCTCTGCTAACTCATCTCAGCACTCGCAAGGTACCTTAACTGAAGTGAACTTGGGTGTTGGAATTCCAACCTCTACGATAAAGGAAAATGGGAAATCTAATCATAGCAATACTAATGGTTCACCAAAAGGTAAAATGAATGGAAATATTGAAAGACAAGAATGCAATGGTAATGCAGGTGCAACTGAAGTTGAACAGGCTATAGAGGAAAAAGGTGAAAGCAATGCAGAAACTGTTGCAAGCCAATGA

Protein sequence

>MsG0180001237.01.T02

MAMPMGNAVTPEIKHFPAVVTAGEMQYRPPPQQQQQHQQQWFVDERDGFMNWIRSEFAAANAIIDCLCQHLGVIGESGEYDHVVGAIQQRRVNWNQVLLMQQYFSVNEVAYALQQVAWRRQQRFVKPVVKEFRKGRQWQRFEGGNGKEGSNSSVENHRRGEGNFVVKGSQVVDKSEEVKSGGKVGYKDDKNLDTAEEKKVLMVLNCNSETIVGHLTAIKIMMCIILHYCEYCLSVYTRLPTFWPAKNTDAIKNHQSDGLLKSSGNSQGSLSSTECASNSGENDSHSMQNQQQNVSGSTTGKTFVSNEMFDGKMVNVVEGLRLYEDLFNSTEVSKLGSLVNDLRVAGRKGQFQGSPTYVVNKRPIRGHGREMIQLGVPIADVDNVTASFKGRFSISHTQFVATFPTSIIMTNEVSLNESDR*

>MsG0180001237.01.T01

MAMPMGNAVTPEIKHFPAVVTAGEMQYRPPPQQQQQHQQQWFVDERDGFMNWIRSEFAAANAIIDCLCQHLGVIGESGEYDHVVGAIQQRRVNWNQVLLMQQYFSVNEVAYALQQVAWRRQQRFVKPVVKEFRKGRQWQRFEGGNGKEGSNSSVENHRRGEGNFVVKGSQVVDKSEEVKSGGKVGYKDDKNLDTAEEKKDAIKNHQSDGLLKSSGNSQGSLSSTECASNSGENDSHSMQNQQQNVSGSTTGKTFVSNEMFDGKMVNVVEGLRLYEDLFNSTEVSKLGSLVNDLRVAGRKGQFQGSPTYVVNKRPIRGHGREMIQLGVPIADVDNVTASFKDKNVESMPSLFQDIIERMAASQVMSVKPDACIVDFYNEGDHSTPNIWPSSFGRPVYTLFLTECDMTFGRTFVSEHFGDYKSNVKLSLGPGSLLVMQGKSADFAKHAIPSIHKQRILVTFAKSQPKKSLPSDAQGLAPSATSHWSPAPNRSPNHISHRPLAPKHYSAVQVTGVLPAPSLHVAPNSMQPLFVPAPVATPIQFATPVPIPPGSTGWTVAPPRHPPPRVVVPGTGVFLPPGSANSSQHSQGTLTEVNLGVGIPTSTIKENGKSNHSNTNGSPKGKMNGNIERQECNGNAGATEVEQAIEEKGESNAETVASQ*