AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041380.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041380.01.T01 MTR_7g109800 96.622 296 9 1 1 296 1 295 0.0 593
MsG0780041380.01.T01 MTR_1g086790 61.290 310 75 17 21 296 27 325 4.73e-93 279
MsG0780041380.01.T01 MTR_2g033820 40.909 308 128 11 35 296 73 372 3.13e-43 152
MsG0780041380.01.T01 MTR_5g043880 46.561 189 70 5 119 292 98 270 5.76e-41 143
MsG0780041380.01.T01 MTR_4g094588 48.276 174 71 6 132 293 165 331 1.27e-39 141
MsG0780041380.01.T01 MTR_5g091390 47.879 165 74 3 132 290 144 302 3.12e-39 140
MsG0780041380.01.T01 MTR_4g122530 65.854 82 28 0 129 210 192 273 3.75e-35 131
MsG0780041380.01.T01 MTR_3g104750 62.821 78 29 0 125 202 84 161 1.27e-31 115
MsG0780041380.01.T01 MTR_7g079010 46.528 144 55 3 68 202 68 198 1.83e-31 117
MsG0780041380.01.T01 MTR_7g011820 43.976 166 77 5 68 218 318 482 2.33e-31 122
MsG0780041380.01.T01 MTR_7g011820 44.681 94 36 2 130 208 198 290 6.90e-16 78.2
MsG0780041380.01.T01 MTR_7g028415 72.464 69 19 0 134 202 82 150 3.17e-31 115
MsG0780041380.01.T01 MTR_7g028710 72.464 69 19 0 134 202 82 150 3.17e-31 115
MsG0780041380.01.T01 MTR_5g042920 59.524 84 34 0 130 213 305 388 3.41e-30 118
MsG0780041380.01.T01 MTR_5g042920 61.290 62 21 2 145 204 151 211 6.90e-17 80.9
MsG0780041380.01.T01 MTR_5g094430 60.227 88 34 1 129 216 214 300 2.02e-29 115
MsG0780041380.01.T01 MTR_5g094430 38.776 147 82 5 146 289 67 208 1.52e-17 82.4
MsG0780041380.01.T01 MTR_1g015140 61.250 80 31 0 124 203 81 160 2.03e-29 110
MsG0780041380.01.T01 MTR_5g094430 60.227 88 34 1 129 216 236 322 2.51e-29 115
MsG0780041380.01.T01 MTR_5g094430 38.776 147 82 5 146 289 89 230 1.55e-17 82.8
MsG0780041380.01.T01 MTR_5g094430 60.227 88 34 1 129 216 348 434 4.65e-29 116
MsG0780041380.01.T01 MTR_5g094430 38.776 147 82 5 146 289 201 342 3.26e-17 82.0
MsG0780041380.01.T01 MTR_8g092010 42.424 132 69 2 81 210 47 173 5.36e-29 109
MsG0780041380.01.T01 MTR_4g082580 45.968 124 63 1 91 210 220 343 9.07e-29 114
MsG0780041380.01.T01 MTR_4g082580 53.125 64 30 0 145 208 145 208 1.19e-15 77.0
MsG0780041380.01.T01 MTR_3g009470 62.069 87 32 1 129 215 479 564 1.14e-28 115
MsG0780041380.01.T01 MTR_3g009470 58.209 67 27 1 145 211 280 345 3.83e-17 82.0
MsG0780041380.01.T01 MTR_3g095080 46.281 121 59 1 87 201 80 200 1.26e-28 109
MsG0780041380.01.T01 MTR_3g095080 46.281 121 59 1 87 201 104 224 1.72e-28 110
MsG0780041380.01.T01 MTR_8g007270 46.218 119 60 2 87 201 92 210 4.43e-28 108
MsG0780041380.01.T01 MTR_3g056100 59.756 82 33 0 129 210 242 323 4.67e-28 112
MsG0780041380.01.T01 MTR_3g056100 57.812 64 26 1 145 208 99 161 6.84e-16 77.8
MsG0780041380.01.T01 MTR_3g056100 59.756 82 33 0 129 210 255 336 5.05e-28 112
MsG0780041380.01.T01 MTR_3g056100 57.812 64 26 1 145 208 99 161 6.64e-16 77.8
MsG0780041380.01.T01 MTR_3g056100 59.756 82 33 0 129 210 399 480 9.58e-28 112
MsG0780041380.01.T01 MTR_3g056100 57.812 64 26 1 145 208 243 305 6.69e-16 78.2
MsG0780041380.01.T01 MTR_3g056100 59.756 82 33 0 129 210 386 467 1.01e-27 112
MsG0780041380.01.T01 MTR_3g056100 57.812 64 26 1 145 208 243 305 7.13e-16 78.2
MsG0780041380.01.T01 MTR_7g100510 60.526 76 30 0 130 205 346 421 1.95e-27 110
MsG0780041380.01.T01 MTR_7g100510 52.055 73 34 1 146 218 190 261 5.24e-17 81.3
MsG0780041380.01.T01 MTR_3g031220 44.776 134 60 2 84 204 292 424 9.87e-27 109
MsG0780041380.01.T01 MTR_3g031220 54.688 64 28 1 145 208 198 260 6.29e-16 78.2
MsG0780041380.01.T01 MTR_8g092140 63.514 74 26 1 129 201 143 216 1.34e-26 104
MsG0780041380.01.T01 MTR_7g071120 56.098 82 36 0 129 210 308 389 3.44e-26 107
MsG0780041380.01.T01 MTR_7g071120 48.315 89 38 2 145 233 166 246 7.04e-18 84.0
MsG0780041380.01.T01 MTR_4g013260 58.442 77 32 0 129 205 320 396 3.94e-26 107
MsG0780041380.01.T01 MTR_4g013260 47.778 90 41 2 145 232 184 269 1.69e-18 85.9
MsG0780041380.01.T01 MTR_5g074400 44.262 122 67 1 90 211 366 486 4.68e-26 108
MsG0780041380.01.T01 MTR_5g074400 55.000 60 26 1 145 204 243 301 1.59e-14 73.9
MsG0780041380.01.T01 MTR_7g080020 59.211 76 31 0 129 204 477 552 2.28e-25 106
MsG0780041380.01.T01 MTR_7g080020 58.209 67 27 1 145 211 280 345 1.06e-16 80.9
MsG0780041380.01.T01 MTR_1g077780 51.899 79 38 0 126 204 43 121 4.38e-25 98.2
MsG0780041380.01.T01 MTR_3g095040 52.632 76 36 0 132 207 105 180 9.66e-25 99.0
MsG0780041380.01.T01 MTR_7g080000 57.895 76 32 0 129 204 416 491 1.08e-24 104
MsG0780041380.01.T01 MTR_7g080000 54.412 68 30 1 144 211 233 299 2.39e-15 76.6
MsG0780041380.01.T01 MTR_8g096730 49.451 91 40 2 118 202 37 127 1.22e-24 97.1
MsG0780041380.01.T01 MTR_7g062220 40.132 152 77 5 145 289 124 268 1.44e-23 98.6
MsG0780041380.01.T01 MTR_4g132430 50.649 77 37 1 129 204 111 187 1.52e-22 96.3
MsG0780041380.01.T01 MTR_2g023930 53.247 77 35 1 129 204 289 365 2.57e-22 97.1
MsG0780041380.01.T01 MTR_2g105060 49.383 81 38 2 127 204 74 154 4.12e-22 92.8
MsG0780041380.01.T01 MTR_4g132430 50.649 77 37 1 129 204 245 321 4.26e-22 96.3
MsG0780041380.01.T01 MTR_1g009613 36.364 143 85 5 64 201 178 319 6.86e-22 94.4
MsG0780041380.01.T01 MTR_2g105060 49.383 81 38 2 127 204 149 229 8.43e-22 93.6
MsG0780041380.01.T01 MTR_7g110720 45.652 92 45 2 129 215 173 264 1.63e-21 94.0
MsG0780041380.01.T01 MTR_7g110720 45.652 92 45 2 129 215 200 291 1.64e-21 94.4
MsG0780041380.01.T01 MTR_5g097490 56.000 75 33 0 130 204 237 311 1.70e-21 93.6
MsG0780041380.01.T01 MTR_5g097490 50.000 60 29 1 145 204 92 150 4.93e-11 63.2
MsG0780041380.01.T01 MTR_2g088000 45.652 92 44 2 129 214 333 424 2.32e-21 94.4
MsG0780041380.01.T01 MTR_5g016610 48.193 83 42 1 120 201 174 256 2.37e-21 91.7
MsG0780041380.01.T01 MTR_3g053330 43.617 94 50 2 129 219 235 328 3.14e-21 93.6
MsG0780041380.01.T01 MTR_4g094412 48.718 78 39 1 129 205 218 295 4.24e-21 93.2
MsG0780041380.01.T01 MTR_4g094412 48.718 78 39 1 129 205 227 304 4.52e-21 93.2
MsG0780041380.01.T01 MTR_4g130900 38.655 119 73 0 87 205 301 419 8.45e-21 92.4
MsG0780041380.01.T01 MTR_2g045360 38.158 152 72 7 129 274 195 330 8.87e-21 92.0
MsG0780041380.01.T01 MTR_6g086555 40.196 102 50 2 132 222 193 294 1.21e-20 91.7
MsG0780041380.01.T01 MTR_4g107970 41.748 103 51 2 104 205 145 239 3.68e-20 90.9
MsG0780041380.01.T01 MTR_4g107970 41.748 103 51 2 104 205 222 316 3.94e-20 90.9
MsG0780041380.01.T01 MTR_1g078260 48.750 80 39 2 132 210 234 312 1.95e-19 88.6
MsG0780041380.01.T01 MTR_4g049790 44.944 89 44 2 130 213 297 385 7.21e-19 87.0
MsG0780041380.01.T01 MTR_4g094908 47.619 84 42 2 120 201 240 323 7.48e-19 85.5
MsG0780041380.01.T01 MTR_7g009730 41.237 97 48 2 107 202 189 277 9.09e-19 86.7
MsG0780041380.01.T01 MTR_4g007060 43.878 98 44 4 126 212 99 196 1.15e-18 84.3
MsG0780041380.01.T01 MTR_4g049760 42.697 89 46 2 130 213 275 363 1.51e-18 85.9
MsG0780041380.01.T01 MTR_4g007060 43.878 98 44 4 126 212 133 230 1.71e-18 84.3
MsG0780041380.01.T01 MTR_4g127040 40.449 89 52 1 120 207 220 308 2.37e-18 84.0
MsG0780041380.01.T01 MTR_1g013760 55.000 60 26 1 143 201 138 197 2.79e-18 83.2
MsG0780041380.01.T01 MTR_8g028565 40.206 97 56 2 110 204 119 215 4.07e-18 83.6
MsG0780041380.01.T01 MTR_3g106060 50.000 72 33 2 143 211 136 207 1.22e-17 81.6
MsG0780041380.01.T01 MTR_7g109600 47.761 67 34 1 146 211 54 120 1.97e-17 80.5
MsG0780041380.01.T01 MTR_7g079040 45.679 81 42 2 146 224 155 235 2.95e-17 80.9
MsG0780041380.01.T01 MTR_3g009470 58.209 67 27 1 145 211 280 345 3.56e-17 82.0
MsG0780041380.01.T01 MTR_1g070455 45.946 74 39 1 129 201 277 350 3.62e-17 81.3
MsG0780041380.01.T01 MTR_8g087000 41.860 86 48 2 146 230 77 161 4.38e-17 79.3
MsG0780041380.01.T01 MTR_8g087000 41.860 86 48 2 146 230 78 162 4.49e-17 79.3
MsG0780041380.01.T01 MTR_8g098945 46.154 78 40 2 144 219 128 205 9.86e-17 79.0
MsG0780041380.01.T01 MTR_3g108960 46.341 82 42 2 121 201 291 371 1.06e-16 80.1
MsG0780041380.01.T01 MTR_2g032030 55.000 60 26 1 146 204 268 327 1.40e-16 80.1
MsG0780041380.01.T01 MTR_2g032030 55.000 60 26 1 146 204 268 327 1.73e-16 79.7
MsG0780041380.01.T01 MTR_1g013790 44.872 78 40 2 144 218 100 177 2.52e-16 77.4
MsG0780041380.01.T01 MTR_3g031220 54.688 64 28 1 145 208 198 260 3.04e-16 78.6
MsG0780041380.01.T01 MTR_8g099350 36.296 135 76 5 73 200 59 190 2.63e-15 75.9
MsG0780041380.01.T01 MTR_2g016770 50.000 60 29 1 146 204 36 95 5.60e-15 72.8
MsG0780041380.01.T01 MTR_2g016770 50.000 60 29 1 146 204 28 87 6.14e-15 72.4
MsG0780041380.01.T01 MTR_5g029850 62.295 61 22 1 102 162 9 68 8.40e-15 68.6
MsG0780041380.01.T01 MTR_5g074200 43.158 95 47 3 145 233 220 313 1.13e-14 73.6
MsG0780041380.01.T01 MTR_7g117200 40.206 97 54 2 107 200 81 176 1.25e-14 73.6
MsG0780041380.01.T01 MTR_0117s0040 39.806 103 54 3 100 201 36 131 2.24e-14 71.6
MsG0780041380.01.T01 MTR_2g024380 30.597 134 90 2 76 208 184 315 4.05e-14 72.8
MsG0780041380.01.T01 MTR_2g083870 50.820 61 29 1 146 205 81 141 4.78e-14 70.9
MsG0780041380.01.T01 MTR_1g099600 50.000 60 29 1 146 204 186 245 7.07e-14 71.2
MsG0780041380.01.T01 MTR_8g027860 41.176 85 46 2 119 200 111 194 1.00e-13 70.9
MsG0780041380.01.T01 MTR_2g075750 50.000 60 27 1 144 200 27 86 1.21e-13 68.6
MsG0780041380.01.T01 MTR_8g067650 40.230 87 50 2 126 210 319 405 1.72e-13 70.9
MsG0780041380.01.T01 MTR_3g090860 51.667 60 26 1 144 200 132 191 1.77e-13 70.1
MsG0780041380.01.T01 MTR_8g069935 38.298 94 56 2 119 210 304 397 2.06e-13 70.5
MsG0780041380.01.T01 MTR_2g075610 50.847 59 26 1 144 199 28 86 2.58e-13 67.8
MsG0780041380.01.T01 MTR_2g075680 40.000 90 46 2 119 200 117 206 3.16e-13 69.3
MsG0780041380.01.T01 MTR_2g075700 48.333 60 28 1 144 200 143 202 4.26e-13 68.9
MsG0780041380.01.T01 MTR_5g097500 42.667 75 43 0 130 204 215 289 5.98e-13 68.6
MsG0780041380.01.T01 MTR_2g024350 45.902 61 32 1 145 204 8 68 6.00e-13 67.4
MsG0780041380.01.T01 MTR_7g073430 50.847 59 26 1 145 200 122 180 7.01e-13 67.8
MsG0780041380.01.T01 MTR_4g047580 37.500 80 49 1 130 208 266 345 7.69e-13 68.9
MsG0780041380.01.T01 MTR_8g067635 47.761 67 34 1 145 210 349 415 1.06e-12 68.6
MsG0780041380.01.T01 MTR_5g067680 38.000 100 51 2 145 241 202 293 1.92e-12 67.4
MsG0780041380.01.T01 MTR_8g032510 39.560 91 47 3 120 204 96 184 3.57e-12 65.9
MsG0780041380.01.T01 MTR_7g073380 46.667 60 29 1 144 200 122 181 8.79e-12 64.7
MsG0780041380.01.T01 MTR_5g044695 53.488 43 20 0 129 171 61 103 1.68e-11 60.5
MsG0780041380.01.T01 MTR_5g067700 34.821 112 64 4 119 223 82 191 3.28e-11 62.4
MsG0780041380.01.T01 MTR_5g018380 44.068 59 31 1 144 202 122 178 4.09e-11 61.2
MsG0780041380.01.T01 MTR_8g092010 34.409 93 54 2 81 171 47 134 6.42e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041380.01.T01 AT2G47260 53.361 238 84 6 83 296 103 337 5.11e-62 200
MsG0780041380.01.T01 AT1G29860 48.295 176 69 3 129 296 120 281 2.43e-46 157
MsG0780041380.01.T01 AT3G62340 36.697 327 124 14 2 296 1 276 3.96e-46 157
MsG0780041380.01.T01 AT4G18170 69.388 98 29 1 112 208 138 235 1.04e-43 152
MsG0780041380.01.T01 AT5G49520 48.469 196 77 5 117 292 193 384 6.49e-43 152
MsG0780041380.01.T01 AT1G69310 46.286 175 84 3 118 292 120 284 4.26e-41 144
MsG0780041380.01.T01 AT1G69310 46.286 175 84 3 118 292 120 284 4.26e-41 144
MsG0780041380.01.T01 AT1G69310 46.286 175 84 3 118 292 120 284 4.26e-41 144
MsG0780041380.01.T01 AT5G46350 45.455 165 81 2 132 296 170 325 5.05e-39 140
MsG0780041380.01.T01 AT1G69310 44.000 175 84 4 118 292 120 280 1.74e-35 129
MsG0780041380.01.T01 AT5G13080 70.423 71 21 0 132 202 54 124 3.99e-31 114
MsG0780041380.01.T01 AT2G03340 42.177 147 79 3 71 214 341 484 5.12e-31 121
MsG0780041380.01.T01 AT2G03340 60.000 60 23 1 145 204 250 308 3.24e-16 79.0
MsG0780041380.01.T01 AT3G01970 69.014 71 22 0 131 201 51 121 7.19e-31 113
MsG0780041380.01.T01 AT5G41570 59.140 93 35 2 111 202 65 155 1.16e-30 114
MsG0780041380.01.T01 AT1G13960 61.538 91 35 0 130 220 241 331 2.54e-30 117
MsG0780041380.01.T01 AT1G13960 60.000 60 23 1 145 204 76 134 2.15e-16 79.0
MsG0780041380.01.T01 AT1G13960 68.056 72 23 0 130 201 394 465 7.13e-30 118
MsG0780041380.01.T01 AT1G13960 60.000 60 23 1 145 204 229 287 1.89e-16 79.7
MsG0780041380.01.T01 AT4G39410 55.238 105 45 2 118 221 195 298 7.16e-30 115
MsG0780041380.01.T01 AT1G64000 69.014 71 22 0 132 202 101 171 1.18e-29 111
MsG0780041380.01.T01 AT5G07100 44.800 125 68 1 86 209 81 205 2.19e-29 111
MsG0780041380.01.T01 AT5G07100 49.275 69 35 0 145 213 24 92 1.72e-15 74.3
MsG0780041380.01.T01 AT5G07100 44.800 125 68 1 86 209 81 205 2.19e-29 111
MsG0780041380.01.T01 AT5G07100 49.275 69 35 0 145 213 24 92 1.72e-15 74.3
MsG0780041380.01.T01 AT5G07100 44.800 125 68 1 86 209 81 205 2.19e-29 111
MsG0780041380.01.T01 AT5G07100 49.275 69 35 0 145 213 24 92 1.72e-15 74.3
MsG0780041380.01.T01 AT5G07100 44.800 125 68 1 86 209 81 205 2.19e-29 111
MsG0780041380.01.T01 AT5G07100 49.275 69 35 0 145 213 24 92 1.72e-15 74.3
MsG0780041380.01.T01 AT2G44745 52.941 102 47 1 100 201 101 201 4.31e-29 110
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 120 270 5.80e-29 114
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 35 104 1.97e-16 79.3
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 120 270 5.80e-29 114
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 35 104 1.97e-16 79.3
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 120 270 5.80e-29 114
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 35 104 1.97e-16 79.3
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 120 270 5.80e-29 114
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 35 104 1.97e-16 79.3
MsG0780041380.01.T01 AT5G07100 44.800 125 68 1 86 209 174 298 6.38e-29 112
MsG0780041380.01.T01 AT5G07100 49.275 69 35 0 145 213 117 185 3.40e-15 75.1
MsG0780041380.01.T01 AT2G46130 62.338 77 29 0 126 202 11 87 8.82e-29 106
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 224 374 1.22e-28 114
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 139 208 2.89e-16 79.3
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 256 406 1.31e-28 115
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 171 240 3.29e-16 79.0
MsG0780041380.01.T01 AT4G26640 42.763 152 79 3 67 211 296 446 1.70e-28 115
MsG0780041380.01.T01 AT4G26640 54.930 71 31 1 145 215 211 280 3.18e-16 79.3
MsG0780041380.01.T01 AT3G01080 55.056 89 40 0 116 204 315 403 5.00e-28 112
MsG0780041380.01.T01 AT3G01080 52.941 68 31 1 145 212 205 271 7.54e-16 77.8
MsG0780041380.01.T01 AT3G01080 55.056 89 40 0 116 204 277 365 7.15e-28 112
MsG0780041380.01.T01 AT3G01080 52.941 68 31 1 145 212 167 233 9.31e-16 77.4
MsG0780041380.01.T01 AT2G38470 56.818 88 38 0 126 213 343 430 1.67e-27 112
MsG0780041380.01.T01 AT2G38470 43.137 102 55 3 104 204 143 242 1.20e-15 77.4
MsG0780041380.01.T01 AT4G26440 59.551 89 35 1 129 217 356 443 3.46e-27 111
MsG0780041380.01.T01 AT4G26440 49.315 73 36 1 145 217 178 249 3.47e-15 76.3
MsG0780041380.01.T01 AT5G26170 60.563 71 28 0 131 201 99 169 3.66e-27 104
MsG0780041380.01.T01 AT5G56270 61.842 76 29 0 129 204 471 546 3.03e-26 108
MsG0780041380.01.T01 AT5G56270 55.224 67 29 1 145 211 273 338 2.41e-15 76.6
MsG0780041380.01.T01 AT2G04880 61.333 75 29 0 130 204 268 342 4.07e-26 107
MsG0780041380.01.T01 AT2G04880 56.452 62 26 1 144 205 110 170 3.39e-16 79.0
MsG0780041380.01.T01 AT2G04880 61.333 75 29 0 130 204 292 366 4.83e-26 107
MsG0780041380.01.T01 AT2G04880 56.452 62 26 1 144 205 110 170 3.67e-16 79.0
MsG0780041380.01.T01 AT5G64810 50.000 82 41 0 120 201 85 166 1.98e-25 100
MsG0780041380.01.T01 AT2G21900 51.765 85 36 2 125 204 84 168 1.01e-24 99.0
MsG0780041380.01.T01 AT1G55600 42.991 107 57 1 98 204 264 366 1.05e-24 103
MsG0780041380.01.T01 AT2G37260 46.018 113 46 2 121 233 244 341 1.20e-24 102
MsG0780041380.01.T01 AT2G37260 44.792 96 48 3 146 237 84 178 3.40e-16 78.2
MsG0780041380.01.T01 AT2G37260 46.018 113 46 2 121 233 246 343 1.21e-24 102
MsG0780041380.01.T01 AT2G37260 44.792 96 48 3 146 237 86 180 3.38e-16 78.2
MsG0780041380.01.T01 AT2G37260 46.018 113 46 2 121 233 326 423 2.63e-24 102
MsG0780041380.01.T01 AT2G37260 33.152 184 108 6 68 237 78 260 1.42e-16 79.7
MsG0780041380.01.T01 AT4G04450 48.936 94 45 2 129 219 182 275 9.65e-24 100
MsG0780041380.01.T01 AT2G30250 54.878 82 37 0 129 210 312 393 2.03e-23 99.4
MsG0780041380.01.T01 AT2G30250 39.815 108 58 2 146 247 167 273 4.07e-13 69.3
MsG0780041380.01.T01 AT4G04450 48.936 94 45 2 129 219 276 369 2.58e-23 100
MsG0780041380.01.T01 AT2G46130 57.143 77 29 1 126 202 11 83 2.62e-23 92.4
MsG0780041380.01.T01 AT1G68150 30.220 182 110 4 41 205 115 296 2.84e-23 98.6
MsG0780041380.01.T01 AT2G30590 47.619 84 43 1 120 202 288 371 2.88e-21 93.2
MsG0780041380.01.T01 AT1G62300 47.619 84 43 1 122 204 289 372 3.65e-21 94.0
MsG0780041380.01.T01 AT4G22070 50.649 77 37 1 129 204 281 357 4.53e-21 93.6
MsG0780041380.01.T01 AT4G22070 50.649 77 37 1 129 204 281 357 4.53e-21 93.6
MsG0780041380.01.T01 AT4G22070 50.649 77 37 1 129 204 281 357 4.53e-21 93.6
MsG0780041380.01.T01 AT4G22070 50.649 77 37 1 129 204 281 357 4.53e-21 93.6
MsG0780041380.01.T01 AT4G01720 50.649 77 37 1 129 204 223 299 2.25e-20 91.3
MsG0780041380.01.T01 AT4G31550 46.341 82 43 1 121 201 221 302 5.16e-20 89.0
MsG0780041380.01.T01 AT4G31800 48.000 75 38 1 144 217 110 184 1.28e-19 86.3
MsG0780041380.01.T01 AT4G31550 46.429 84 42 2 119 201 222 303 1.54e-19 87.4
MsG0780041380.01.T01 AT4G31800 48.000 75 38 1 144 217 175 249 2.47e-19 86.7
MsG0780041380.01.T01 AT2G25000 52.857 70 32 1 144 212 102 171 3.02e-19 84.7
MsG0780041380.01.T01 AT2G25000 52.857 70 32 1 144 212 102 171 3.02e-19 84.7
MsG0780041380.01.T01 AT1G80840 53.226 62 28 1 144 204 145 206 4.24e-19 85.9
MsG0780041380.01.T01 AT4G30935 56.667 60 26 0 146 205 332 391 4.41e-19 87.4
MsG0780041380.01.T01 AT5G43290 61.404 57 22 0 145 201 114 170 4.45e-19 85.5
MsG0780041380.01.T01 AT2G25000 52.857 70 32 1 144 212 124 193 5.37e-19 84.7
MsG0780041380.01.T01 AT1G18860 46.753 77 40 1 129 204 223 299 6.97e-19 87.0
MsG0780041380.01.T01 AT2G25000 52.857 70 32 1 144 212 145 214 7.99e-19 84.7
MsG0780041380.01.T01 AT5G15130 41.489 94 50 2 125 213 207 300 9.54e-19 86.7
MsG0780041380.01.T01 AT5G15130 41.489 94 50 2 125 213 165 258 9.63e-19 86.7
MsG0780041380.01.T01 AT1G30650 44.118 102 51 3 109 205 178 278 3.07e-18 84.7
MsG0780041380.01.T01 AT4G24240 44.578 83 45 1 120 201 256 338 4.34e-18 83.6
MsG0780041380.01.T01 AT2G23320 45.783 83 44 1 120 201 215 297 5.49e-18 83.2
MsG0780041380.01.T01 AT2G24570 42.697 89 49 2 115 201 212 300 7.63e-18 82.8
MsG0780041380.01.T01 AT1G29280 52.381 63 29 1 146 207 75 137 7.63e-18 81.6
MsG0780041380.01.T01 AT5G52830 47.126 87 39 3 119 204 145 225 1.11e-17 82.4
MsG0780041380.01.T01 AT5G28650 40.217 92 54 1 120 210 237 328 1.55e-17 82.0
MsG0780041380.01.T01 AT3G04670 40.217 92 54 1 120 210 237 328 1.95e-17 81.6
MsG0780041380.01.T01 AT4G01250 55.000 60 26 1 146 204 129 188 1.05e-16 79.0
MsG0780041380.01.T01 AT2G34830 55.000 60 26 1 146 204 225 284 1.58e-16 79.7
MsG0780041380.01.T01 AT2G34830 55.000 60 26 1 146 204 216 275 1.67e-16 79.7
MsG0780041380.01.T01 AT3G01080 58.333 60 24 1 145 204 205 263 3.79e-16 77.8
MsG0780041380.01.T01 AT5G45050 38.462 117 65 2 97 206 1126 1242 3.79e-16 79.3
MsG0780041380.01.T01 AT5G45050 38.462 117 65 2 97 206 1098 1214 3.81e-16 79.3
MsG0780041380.01.T01 AT5G45050 38.462 117 65 2 97 206 987 1103 3.86e-16 79.3
MsG0780041380.01.T01 AT3G58710 42.857 91 47 2 119 204 41 131 1.53e-15 75.5
MsG0780041380.01.T01 AT3G58710 41.000 100 53 3 111 204 31 130 1.75e-15 75.1
MsG0780041380.01.T01 AT1G69810 40.659 91 49 3 129 217 129 216 5.43e-15 74.7
MsG0780041380.01.T01 AT1G69810 40.659 91 49 3 129 217 187 274 5.72e-15 75.1
MsG0780041380.01.T01 AT4G23550 43.529 85 46 2 140 222 135 219 1.85e-14 72.8
MsG0780041380.01.T01 AT2G46400 37.079 89 53 1 118 203 77 165 1.04e-13 70.5
MsG0780041380.01.T01 AT1G66560 49.153 59 27 1 145 200 103 161 1.82e-13 69.3
MsG0780041380.01.T01 AT4G11070 41.758 91 49 2 113 200 78 167 5.62e-13 68.2
MsG0780041380.01.T01 AT4G11070 41.758 91 49 2 113 200 110 199 7.12e-13 68.2
MsG0780041380.01.T01 AT4G12020 52.542 59 27 1 146 204 469 526 9.48e-13 69.3
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.71e-11 65.5
MsG0780041380.01.T01 AT4G12020 52.542 59 27 1 146 204 469 526 9.48e-13 69.3
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.71e-11 65.5
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.01e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.75e-11 65.5
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.02e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.79e-11 65.5
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.02e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.79e-11 65.5
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.03e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.72e-11 65.5
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.04e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.85e-11 65.1
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.05e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.90e-11 65.1
MsG0780041380.01.T01 AT4G12020 50.000 62 30 1 143 204 466 526 1.05e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.83e-11 65.5
MsG0780041380.01.T01 AT4G12020 52.542 59 27 1 146 204 402 459 1.11e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 558 594 1.89e-11 65.1
MsG0780041380.01.T01 AT4G12020 46.377 69 36 1 143 211 466 533 1.24e-12 68.9
MsG0780041380.01.T01 AT4G12020 70.270 37 11 0 129 165 625 661 1.97e-11 65.1
MsG0780041380.01.T01 AT3G56400 38.372 86 47 2 118 200 96 178 1.85e-12 67.0
MsG0780041380.01.T01 AT5G24110 34.259 108 58 4 118 220 84 183 3.38e-12 66.2
MsG0780041380.01.T01 AT1G66550 39.759 83 44 2 146 222 104 186 5.88e-12 64.7
MsG0780041380.01.T01 AT2G40740 46.479 71 35 1 145 212 173 243 5.98e-12 65.5
MsG0780041380.01.T01 AT2G40740 46.479 71 35 1 145 212 182 252 6.04e-12 65.5
MsG0780041380.01.T01 AT1G66550 39.535 86 40 3 146 222 109 191 6.10e-12 65.1
MsG0780041380.01.T01 AT5G45260 37.349 83 49 1 125 204 1188 1270 1.97e-11 65.1
MsG0780041380.01.T01 AT4G23810 49.153 59 27 1 145 200 158 216 3.84e-11 63.2
MsG0780041380.01.T01 AT5G22570 48.276 58 27 1 146 200 111 168 4.67e-11 62.8
MsG0780041380.01.T01 AT2G40750 47.458 59 28 1 145 200 152 210 7.35e-11 62.4

Find 67 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAATACATTGTCGTCTT+TGG 0.201669 7:+90304643 MsG0780041380.01.T01:CDS
AAGGAGCTTCATGGAGTTAT+TGG 0.217692 7:+90303358 MsG0780041380.01.T01:CDS
GAAGAAGAACGAGACATAAT+TGG 0.261796 7:-90304506 None:intergenic
ATGGAGGATTATTCGAATAT+TGG 0.275837 7:+90303287 MsG0780041380.01.T01:CDS
GATGCTGCTGACTATAATAT+TGG 0.280170 7:-90304610 None:intergenic
TTCAATACATTGTCGTCTTT+GGG 0.295835 7:+90304644 MsG0780041380.01.T01:CDS
TGTTGAGTTGATTATTAGTT+TGG 0.336655 7:-90303586 None:intergenic
AATTATGTCTCGTTCTTCTT+CGG 0.363102 7:+90304508 MsG0780041380.01.T01:CDS
GATGAAGAGTTAGGAGTGGC+AGG 0.379102 7:-90303509 None:intergenic
GGTTGTAAAGGAACCACCTT+TGG 0.394614 7:+90303433 MsG0780041380.01.T01:CDS
GAACGAGACATAATTGGGTT+TGG 0.394670 7:-90304500 None:intergenic
ATCTGAAGAAAGGAGCTTCA+TGG 0.399237 7:+90303349 MsG0780041380.01.T01:CDS
AGGAGCTTCATGGAGTTATT+GGG 0.399801 7:+90303359 MsG0780041380.01.T01:CDS
GAAAAGCGAGGTGGATCATC+TGG 0.414478 7:+90304118 MsG0780041380.01.T01:CDS
GATGAAATAGATGAAGAGTT+AGG 0.420106 7:-90303518 None:intergenic
TATTGGACTGACCTTGGAAA+GGG 0.432987 7:-90304191 None:intergenic
GCTGAATGCACCACCAACTT+TGG 0.436903 7:+90304563 MsG0780041380.01.T01:CDS
TGTGGTTGGTATTAGGTTGA+AGG 0.452689 7:+90304043 MsG0780041380.01.T01:intron
GTAGCATTCATATTCTTTGA+AGG 0.456358 7:-90304671 None:intergenic
TCTTCTTCGGCTGTTCGTGC+CGG 0.460798 7:+90304521 MsG0780041380.01.T01:CDS
AAGAAGAACGAGACATAATT+GGG 0.464348 7:-90304505 None:intergenic
AGGCCATTGTCCTGTACCCT+TGG 0.466063 7:-90304722 None:intergenic
TGTTTGATTTATCTGAAGAA+AGG 0.471881 7:+90303339 MsG0780041380.01.T01:CDS
TGTTCCTTCACATATGTTCA+AGG 0.476657 7:+90304757 MsG0780041380.01.T01:CDS
TAGGTTGTTACAACAATGGC+TGG 0.477731 7:-90304458 None:intergenic
ATGCTGCTGACTATAATATT+GGG 0.483227 7:-90304609 None:intergenic
AAAGCGATTCTAGCTTCTCT+TGG 0.486828 7:-90304089 None:intergenic
TAGCATTCATATTCTTTGAA+GGG 0.492165 7:-90304670 None:intergenic
GAGGTGGATCATCTGGAAGA+TGG 0.513204 7:+90304125 MsG0780041380.01.T01:CDS
ACACTTGGAAATGAGTAGCT+AGG 0.516517 7:-90303317 None:intergenic
CTTCACATTACATGAAACAC+TGG 0.528954 7:-90304408 None:intergenic
CCATTCCCATCACTCTCCAA+AGG 0.531548 7:-90303449 None:intergenic
CACTTGGAAATGAGTAGCTA+GGG 0.534179 7:-90303316 None:intergenic
TGGTGGTGGTAATAGAGATC+CGG 0.534417 7:-90304540 None:intergenic
ATCTGGAAGATGGGTACAGA+TGG 0.534825 7:+90304135 MsG0780041380.01.T01:CDS
ATGTGTGTGCTTTCCTTCGT+AGG 0.535338 7:-90304477 None:intergenic
GGTGGTTCCTTTACAACCAC+AGG 0.538122 7:-90303428 None:intergenic
TTGATCAGAACCAAAGTTGG+TGG 0.538546 7:-90304573 None:intergenic
TGATTTGCCTGTGGTTGTAA+AGG 0.540038 7:+90303421 MsG0780041380.01.T01:CDS
AACCACCTTTGGAGAGTGAT+GGG 0.545230 7:+90303444 MsG0780041380.01.T01:CDS
AGAGACCACTTTGTAATCCA+AGG 0.545703 7:+90304705 MsG0780041380.01.T01:CDS
AAGTTGGTGGTGCATTCAGC+TGG 0.549478 7:-90304560 None:intergenic
GAACCACCTTTGGAGAGTGA+TGG 0.558173 7:+90303443 MsG0780041380.01.T01:CDS
GTGGTGCATTCAGCTGGTGG+TGG 0.564170 7:-90304554 None:intergenic
AAGGAACAACATCTTGAAGA+AGG 0.565496 7:-90304742 None:intergenic
AGGTGGATCATCTGGAAGAT+GGG 0.567407 7:+90304126 MsG0780041380.01.T01:CDS
ACTTTGTAATCCAAGGGTAC+AGG 0.572303 7:+90304712 MsG0780041380.01.T01:CDS
GGGTACAGATGGAGAAAGTA+CGG 0.573593 7:+90304146 MsG0780041380.01.T01:CDS
TCAGATAAATCAAACACACT+TGG 0.573947 7:-90303332 None:intergenic
TTCGTAGGTTGTTACAACAA+TGG 0.575559 7:-90304462 None:intergenic
ATATTGGACTGACCTTGGAA+AGG 0.575592 7:-90304192 None:intergenic
TAGTTTACTTGATTTGCCTG+TGG 0.610972 7:+90303412 MsG0780041380.01.T01:CDS
TTGGTGGTGCATTCAGCTGG+TGG 0.617490 7:-90304557 None:intergenic
AATAGATGAAGAGTTAGGAG+TGG 0.618477 7:-90303513 None:intergenic
TCCTCCTTGAACATATGTGA+AGG 0.619921 7:-90304761 None:intergenic
TGTACCCTTGGATTACAAAG+TGG 0.631750 7:-90304710 None:intergenic
TTCCCATCACTCTCCAAAGG+TGG 0.633730 7:-90303446 None:intergenic
ATTGGACTGACCTTGGAAAG+GGG 0.644385 7:-90304190 None:intergenic
GAGACCACTTTGTAATCCAA+GGG 0.645369 7:+90304706 MsG0780041380.01.T01:CDS
AATCCAAGGGTACAGGACAA+TGG 0.650442 7:+90304719 MsG0780041380.01.T01:CDS
GAATGGAAAAGAGTGTTCAG+AGG 0.653706 7:+90303466 MsG0780041380.01.T01:CDS
TCCTTCACATATGTTCAAGG+AGG 0.657130 7:+90304760 MsG0780041380.01.T01:CDS
CGCTTTCATGACGAAAAGCG+AGG 0.659806 7:+90304106 MsG0780041380.01.T01:CDS
CCTTTGGAGAGTGATGGGAA+TGG 0.667441 7:+90303449 MsG0780041380.01.T01:CDS
TTTCATGACGAAAAGCGAGG+TGG 0.682863 7:+90304109 MsG0780041380.01.T01:CDS
ATTGTTGTAACAACCTACGA+AGG 0.722353 7:+90304464 MsG0780041380.01.T01:CDS
ATGTAATGTGAAGAAACACG+TGG 0.727622 7:+90304418 MsG0780041380.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACTTTTAAAAACAAAAT+TGG - Chr7:90303771-90303790 None:intergenic 10.0%
!!! AAACTTTTAAAAACAAAATT+GGG - Chr7:90303770-90303789 None:intergenic 10.0%
!!! ATAAAATTATAGAAGTATAT+TGG - Chr7:90304211-90304230 None:intergenic 10.0%
!! TATTAGGTAAAACAAAAAAA+AGG + Chr7:90303708-90303727 MsG0780041380.01.T01:intron 15.0%
!!! ACATTAATTTGTTTGATTTT+TGG + Chr7:90303932-90303951 MsG0780041380.01.T01:intron 15.0%
!!! TTTTCTTATGCTTTAATAAA+GGG - Chr7:90304286-90304305 None:intergenic 15.0%
!! ACATCTAAACATTTATAGAA+TGG - Chr7:90303831-90303850 None:intergenic 20.0%
!!! ATCTCTCTCTTTTTTTTTTA+TGG + Chr7:90303665-90303684 MsG0780041380.01.T01:intron 20.0%
!!! ATTTAATTTCTATGGTTTGT+GGG + Chr7:90304014-90304033 MsG0780041380.01.T01:intron 20.0%
!!! CTAGTAAGATTTAATTTCTA+TGG + Chr7:90304006-90304025 MsG0780041380.01.T01:intron 20.0%
!!! CTTTTCTTATGCTTTAATAA+AGG - Chr7:90304287-90304306 None:intergenic 20.0%
!!! GTAAAACAAAAAAAAGGTTT+TGG + Chr7:90303714-90303733 MsG0780041380.01.T01:intron 20.0%
!!! TCTCTTTTTTTTTTATGGAA+GGG + Chr7:90303670-90303689 MsG0780041380.01.T01:intron 20.0%
!!! TTTTAAAAACAAAATTGGGT+AGG - Chr7:90303766-90303785 None:intergenic 20.0%
! CTGTATCTATATGCATATAT+AGG + Chr7:90304369-90304388 MsG0780041380.01.T01:intron 25.0%
! TAGCATTCATATTCTTTGAA+GGG - Chr7:90304673-90304692 None:intergenic 25.0%
! TTAATAAAGGGAGAGATTAA+AGG - Chr7:90304274-90304293 None:intergenic 25.0%
!! GATTTAATTTCTATGGTTTG+TGG + Chr7:90304013-90304032 MsG0780041380.01.T01:intron 25.0%
!! TGTTTGATTTATCTGAAGAA+AGG + Chr7:90303339-90303358 MsG0780041380.01.T01:CDS 25.0%
!!! AAGGTTTTGGAATTTGATTA+TGG + Chr7:90303727-90303746 MsG0780041380.01.T01:intron 25.0%
!!! AGGTTTTGGAATTTGATTAT+GGG + Chr7:90303728-90303747 MsG0780041380.01.T01:intron 25.0%
!!! CTCTCTTTTTTTTTTATGGA+AGG + Chr7:90303669-90303688 MsG0780041380.01.T01:intron 25.0%
!!! TGTTGAGTTGATTATTAGTT+TGG - Chr7:90303589-90303608 None:intergenic 25.0%
AAAGGAAGCAAAATTGGAAA+GGG - Chr7:90304256-90304275 None:intergenic 30.0%
AAGAAGAACGAGACATAATT+GGG - Chr7:90304508-90304527 None:intergenic 30.0%
AATGTTATACGTATGCTACA+AGG - Chr7:90303917-90303936 None:intergenic 30.0%
AATTATGTCTCGTTCTTCTT+CGG + Chr7:90304508-90304527 MsG0780041380.01.T01:CDS 30.0%
ATGGAGGATTATTCGAATAT+TGG + Chr7:90303287-90303306 MsG0780041380.01.T01:CDS 30.0%
GAAAAAAGGTTTGAATATGG+AGG + Chr7:90303271-90303290 MsG0780041380.01.T01:CDS 30.0%
GAGATTAAAGGAAGCAAAAT+TGG - Chr7:90304262-90304281 None:intergenic 30.0%
GATGAAATAGATGAAGAGTT+AGG - Chr7:90303521-90303540 None:intergenic 30.0%
GGAGAAAAAAGGTTTGAATA+TGG + Chr7:90303268-90303287 MsG0780041380.01.T01:CDS 30.0%
GTAGCATTCATATTCTTTGA+AGG - Chr7:90304674-90304693 None:intergenic 30.0%
TAAAGGAAGCAAAATTGGAA+AGG - Chr7:90304257-90304276 None:intergenic 30.0%
TCAGATAAATCAAACACACT+TGG - Chr7:90303335-90303354 None:intergenic 30.0%
TTCAATACATTGTCGTCTTT+GGG + Chr7:90304644-90304663 MsG0780041380.01.T01:CDS 30.0%
! ATGCTGCTGACTATAATATT+GGG - Chr7:90304612-90304631 None:intergenic 30.0%
! GCAAAGATGGGATTTTTATT+AGG + Chr7:90303692-90303711 MsG0780041380.01.T01:intron 30.0%
AAGGAACAACATCTTGAAGA+AGG - Chr7:90304745-90304764 None:intergenic 35.0%
AAGGAAGCAAAATTGGAAAG+GGG - Chr7:90304255-90304274 None:intergenic 35.0%
AATAGATGAAGAGTTAGGAG+TGG - Chr7:90303516-90303535 None:intergenic 35.0%
ATGTAATGTGAAGAAACACG+TGG + Chr7:90304418-90304437 MsG0780041380.01.T01:CDS 35.0%
ATTGTTGTAACAACCTACGA+AGG + Chr7:90304464-90304483 MsG0780041380.01.T01:CDS 35.0%
CTTCAATACATTGTCGTCTT+TGG + Chr7:90304643-90304662 MsG0780041380.01.T01:CDS 35.0%
CTTCACATTACATGAAACAC+TGG - Chr7:90304411-90304430 None:intergenic 35.0%
GAAGAAGAACGAGACATAAT+TGG - Chr7:90304509-90304528 None:intergenic 35.0%
TATACGTATGCTACAAGGTT+TGG - Chr7:90303912-90303931 None:intergenic 35.0%
TGTTCCTTCACATATGTTCA+AGG + Chr7:90304757-90304776 MsG0780041380.01.T01:CDS 35.0%
TTAAAAATAGCCCCTTTCCA+AGG + Chr7:90304180-90304199 MsG0780041380.01.T01:CDS 35.0%
TTCGTAGGTTGTTACAACAA+TGG - Chr7:90304465-90304484 None:intergenic 35.0%
! GATCTAATGTGGTTGGTATT+AGG + Chr7:90304036-90304055 MsG0780041380.01.T01:intron 35.0%
! GATGCTGCTGACTATAATAT+TGG - Chr7:90304613-90304632 None:intergenic 35.0%
! TTTTATGGAAGGGCAAAGAT+GGG + Chr7:90303680-90303699 MsG0780041380.01.T01:intron 35.0%
! TTTTTATGGAAGGGCAAAGA+TGG + Chr7:90303679-90303698 MsG0780041380.01.T01:intron 35.0%
!! GTTTTGATCAGAACCAAAGT+TGG - Chr7:90304579-90304598 None:intergenic 35.0%
!! TAGTTTACTTGATTTGCCTG+TGG + Chr7:90303412-90303431 MsG0780041380.01.T01:CDS 35.0%
AAGGAGCTTCATGGAGTTAT+TGG + Chr7:90303358-90303377 MsG0780041380.01.T01:CDS 40.0%
ACACTTGGAAATGAGTAGCT+AGG - Chr7:90303320-90303339 None:intergenic 40.0%
AGAGACCACTTTGTAATCCA+AGG + Chr7:90304705-90304724 MsG0780041380.01.T01:CDS 40.0%
AGGAGCTTCATGGAGTTATT+GGG + Chr7:90303359-90303378 MsG0780041380.01.T01:CDS 40.0%
ATATTGGACTGACCTTGGAA+AGG - Chr7:90304195-90304214 None:intergenic 40.0%
ATCTGAAGAAAGGAGCTTCA+TGG + Chr7:90303349-90303368 MsG0780041380.01.T01:CDS 40.0%
CACTTGGAAATGAGTAGCTA+GGG - Chr7:90303319-90303338 None:intergenic 40.0%
GAACGAGACATAATTGGGTT+TGG - Chr7:90304503-90304522 None:intergenic 40.0%
GAAGTATATTGGACTGACCT+TGG - Chr7:90304200-90304219 None:intergenic 40.0%
GAGACCACTTTGTAATCCAA+GGG + Chr7:90304706-90304725 MsG0780041380.01.T01:CDS 40.0%
TAGGTTGTTACAACAATGGC+TGG - Chr7:90304461-90304480 None:intergenic 40.0%
TATTGGACTGACCTTGGAAA+GGG - Chr7:90304194-90304213 None:intergenic 40.0%
TCCTCCTTGAACATATGTGA+AGG - Chr7:90304764-90304783 None:intergenic 40.0%
TCCTTCACATATGTTCAAGG+AGG + Chr7:90304760-90304779 MsG0780041380.01.T01:CDS 40.0%
TGTACCCTTGGATTACAAAG+TGG - Chr7:90304713-90304732 None:intergenic 40.0%
TTGATCAGAACCAAAGTTGG+TGG - Chr7:90304576-90304595 None:intergenic 40.0%
TTTGTGGGATCTAATGTGGT+TGG + Chr7:90304029-90304048 MsG0780041380.01.T01:intron 40.0%
! ACTTTGTAATCCAAGGGTAC+AGG + Chr7:90304712-90304731 MsG0780041380.01.T01:CDS 40.0%
! ATGGTTTGTGGGATCTAATG+TGG + Chr7:90304025-90304044 MsG0780041380.01.T01:intron 40.0%
! TGATTTGCCTGTGGTTGTAA+AGG + Chr7:90303421-90303440 MsG0780041380.01.T01:CDS 40.0%
!! AAAGCGATTCTAGCTTCTCT+TGG - Chr7:90304092-90304111 None:intergenic 40.0%
!! GAATGGAAAAGAGTGTTCAG+AGG + Chr7:90303466-90303485 MsG0780041380.01.T01:CDS 40.0%
!! TGTGGTTGGTATTAGGTTGA+AGG + Chr7:90304043-90304062 MsG0780041380.01.T01:intron 40.0%
AGGTGGATCATCTGGAAGAT+GGG + Chr7:90304126-90304145 MsG0780041380.01.T01:CDS 45.0%
ATCTGGAAGATGGGTACAGA+TGG + Chr7:90304135-90304154 MsG0780041380.01.T01:CDS 45.0%
ATGTGTGTGCTTTCCTTCGT+AGG - Chr7:90304480-90304499 None:intergenic 45.0%
ATTGGACTGACCTTGGAAAG+GGG - Chr7:90304193-90304212 None:intergenic 45.0%
GGGTACAGATGGAGAAAGTA+CGG + Chr7:90304146-90304165 MsG0780041380.01.T01:CDS 45.0%
GGTTGTAAAGGAACCACCTT+TGG + Chr7:90303433-90303452 MsG0780041380.01.T01:CDS 45.0%
TTTCATGACGAAAAGCGAGG+TGG + Chr7:90304109-90304128 MsG0780041380.01.T01:CDS 45.0%
! AACCACCTTTGGAGAGTGAT+GGG + Chr7:90303444-90303463 MsG0780041380.01.T01:CDS 45.0%
! AATCCAAGGGTACAGGACAA+TGG + Chr7:90304719-90304738 MsG0780041380.01.T01:CDS 45.0%
!! TGGTGGTGGTAATAGAGATC+CGG - Chr7:90304543-90304562 None:intergenic 45.0%
CCATTCCCATCACTCTCCAA+AGG - Chr7:90303452-90303471 None:intergenic 50.0%
CGCTTTCATGACGAAAAGCG+AGG + Chr7:90304106-90304125 MsG0780041380.01.T01:CDS 50.0%
GAAAAGCGAGGTGGATCATC+TGG + Chr7:90304118-90304137 MsG0780041380.01.T01:CDS 50.0%
GAGGTGGATCATCTGGAAGA+TGG + Chr7:90304125-90304144 MsG0780041380.01.T01:CDS 50.0%
GATGAAGAGTTAGGAGTGGC+AGG - Chr7:90303512-90303531 None:intergenic 50.0%
GCTGAATGCACCACCAACTT+TGG + Chr7:90304563-90304582 MsG0780041380.01.T01:CDS 50.0%
GGTGGTTCCTTTACAACCAC+AGG - Chr7:90303431-90303450 None:intergenic 50.0%
TTCCCATCACTCTCCAAAGG+TGG - Chr7:90303449-90303468 None:intergenic 50.0%
! CCTTTGGAGAGTGATGGGAA+TGG + Chr7:90303449-90303468 MsG0780041380.01.T01:CDS 50.0%
! GAACCACCTTTGGAGAGTGA+TGG + Chr7:90303443-90303462 MsG0780041380.01.T01:CDS 50.0%
!! AAGTTGGTGGTGCATTCAGC+TGG - Chr7:90304563-90304582 None:intergenic 50.0%
AGGCCATTGTCCTGTACCCT+TGG - Chr7:90304725-90304744 None:intergenic 55.0%
TCTTCTTCGGCTGTTCGTGC+CGG + Chr7:90304521-90304540 MsG0780041380.01.T01:CDS 55.0%
!! TTGGTGGTGCATTCAGCTGG+TGG - Chr7:90304560-90304579 None:intergenic 55.0%
GTGGTGCATTCAGCTGGTGG+TGG - Chr7:90304557-90304576 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90303263 90304787 90303263 ID=MsG0780041380.01;Name=MsG0780041380.01
Chr7 mRNA 90303263 90304787 90303263 ID=MsG0780041380.01.T01;Parent=MsG0780041380.01;Name=MsG0780041380.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|3|0|296
Chr7 exon 90303263 90303612 90303263 ID=MsG0780041380.01.T01:exon:52588;Parent=MsG0780041380.01.T01
Chr7 exon 90304058 90304201 90304058 ID=MsG0780041380.01.T01:exon:52589;Parent=MsG0780041380.01.T01
Chr7 exon 90304391 90304787 90304391 ID=MsG0780041380.01.T01:exon:52590;Parent=MsG0780041380.01.T01
Chr7 CDS 90303263 90303612 90303263 ID=MsG0780041380.01.T01:cds;Parent=MsG0780041380.01.T01
Chr7 CDS 90304058 90304201 90304058 ID=MsG0780041380.01.T01:cds;Parent=MsG0780041380.01.T01
Chr7 CDS 90304391 90304787 90304391 ID=MsG0780041380.01.T01:cds;Parent=MsG0780041380.01.T01
Gene Sequence

>MsG0780041380.01.T01

ATGATGGAGAAAAAAGGTTTGAATATGGAGGATTATTCGAATATTGGATCTTTCCCTAGCTACTCATTTCCAAGTGTGTTTGATTTATCTGAAGAAAGGAGCTTCATGGAGTTATTGGGTGTGCAGCAGAACATGAACAACTATAGTGATAGTTTACTTGATTTGCCTGTGGTTGTAAAGGAACCACCTTTGGAGAGTGATGGGAATGGAAAAGAGTGTTCAGAGGTTTTGAATAGTCAACAACAACCTGCCACTCCTAACTCTTCATCTATTTCATCTGCTTCTAGTGAAGCAATCAATGATGAACACAATAAAACTGTTGACCAAACTAATAATCAACTCAACAAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACCAAGAGAAGCTAGAATCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAATAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGATCTTTGAGTGATCCAGCCATTGTTGTAACAACCTACGAAGGAAAGCACACACATCCAAACCCAATTATGTCTCGTTCTTCTTCGGCTGTTCGTGCCGGATCTCTATTACCACCACCAGCTGAATGCACCACCAACTTTGGTTCTGATCAAAACTACAATATATCCCAATATTATAGTCAGCAGCATCAGCAAGTACTCTTCAATACATTGTCGTCTTTGGGTTTCCCTTCAAAGAATATGAATGCTACTTTTTCTCAAGAGAGACCACTTTGTAATCCAAGGGTACAGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGTAG

Protein sequence

>MsG0780041380.01.T01

MMEKKGLNMEDYSNIGSFPSYSFPSVFDLSEERSFMELLGVQQNMNNYSDSLLDLPVVVKEPPLESDGNGKECSEVLNSQQQPATPNSSSISSASSEAINDEHNKTVDQTNNQLNKQLKAKKTNQKRPREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLSDPAIVVTTYEGKHTHPNPIMSRSSSAVRAGSLLPPPAECTTNFGSDQNYNISQYYSQQHQQVLFNTLSSLGFPSKNMNATFSQERPLCNPRVQDNGLLQDVVPSHMFKEE*