Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011053.01.T01 | PHT32892.1 | 54.913 | 173 | 64 | 3 | 1 | 170 | 28 | 189 | 1.50E-48 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011053.01.T01 | P25083 | 61.765 | 102 | 30 | 2 | 74 | 170 | 289 | 386 | 3.43E-30 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011053.01.T01 | A0A7J7BUG1 | 46.341 | 246 | 52 | 7 | 1 | 170 | 98 | 339 | 2.63e-50 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048302.01 | MsG0280011053.01 | 0.809629 | 1.721566e-50 | 1.016019e-47 |
| MsG0080048345.01 | MsG0280011053.01 | 0.839442 | 1.580396e-57 | 2.182842e-54 |
| MsG0080048348.01 | MsG0280011053.01 | 0.820482 | 6.700380e-53 | 5.308055e-50 |
| MsG0080048349.01 | MsG0280011053.01 | 0.807232 | 5.589085e-50 | 3.096412e-47 |
| MsG0180000019.01 | MsG0280011053.01 | 0.832761 | 7.861185e-56 | 8.871567e-53 |
| MsG0180000222.01 | MsG0280011053.01 | 0.844766 | 6.170056e-59 | 1.006467e-55 |
| MsG0180000887.01 | MsG0280011053.01 | 0.817783 | 2.756141e-52 | 2.026328e-49 |
| MsG0180001050.01 | MsG0280011053.01 | 0.899964 | 1.175487e-77 | 1.487498e-73 |
| MsG0180001053.01 | MsG0280011053.01 | 0.855328 | 6.793253e-62 | 1.562782e-58 |
| MsG0180002912.01 | MsG0280011053.01 | 0.807642 | 4.575558e-50 | 2.561974e-47 |
| MsG0180003130.01 | MsG0280011053.01 | 0.805504 | 1.293136e-49 | 6.852786e-47 |
| MsG0180003240.01 | MsG0280011053.01 | 0.807425 | 5.087884e-50 | 2.832907e-47 |
| MsG0180003241.01 | MsG0280011053.01 | 0.805838 | 1.100370e-49 | 5.881806e-47 |
| MsG0180004110.01 | MsG0280011053.01 | 0.812160 | 4.876402e-51 | 3.077384e-48 |
| MsG0180004562.01 | MsG0280011053.01 | 0.849204 | 3.757765e-60 | 7.071177e-57 |
| MsG0180004752.01 | MsG0280011053.01 | 0.821319 | 4.300277e-53 | 3.486915e-50 |
| MsG0180004947.01 | MsG0280011053.01 | 0.829003 | 6.563232e-55 | 6.631352e-52 |
| MsG0180005172.01 | MsG0280011053.01 | 0.818386 | 2.014290e-52 | 1.505703e-49 |
| MsG0180005357.01 | MsG0280011053.01 | 0.838512 | 2.752556e-57 | 3.695096e-54 |
| MsG0180005996.01 | MsG0280011053.01 | 0.882514 | 9.776430e-71 | 5.972364e-67 |
| MsG0180005997.01 | MsG0280011053.01 | 0.841804 | 3.805112e-58 | 5.654832e-55 |
| MsG0180006047.01 | MsG0280011053.01 | 0.845388 | 4.189037e-59 | 6.969844e-56 |
| MsG0280006433.01 | MsG0280011053.01 | 0.850409 | 1.730185e-60 | 3.386114e-57 |
| MsG0280011041.01 | MsG0280011053.01 | 0.818972 | 1.482809e-52 | 1.126564e-49 |
| MsG0280011042.01 | MsG0280011053.01 | 0.812117 | 4.981019e-51 | 3.139661e-48 |
| MsG0280011053.01 | MsG0280011152.01 | 0.848088 | 7.657455e-60 | 1.389241e-56 |
| MsG0280011053.01 | MsG0280011349.01 | 0.842355 | 2.720446e-58 | 4.114296e-55 |
| MsG0280011053.01 | MsG0280011350.01 | 0.857509 | 1.554857e-62 | 3.846866e-59 |
| MsG0280011053.01 | MsG0280011473.01 | 0.821388 | 4.145923e-53 | 3.368312e-50 |
| MsG0280011053.01 | MsG0380011613.01 | 0.843355 | 1.474846e-58 | 2.301613e-55 |
| MsG0280011053.01 | MsG0380014920.01 | 0.886915 | 2.256813e-72 | 1.643486e-68 |
| MsG0280011053.01 | MsG0380016427.01 | 0.810021 | 1.418144e-50 | 8.455819e-48 |
| MsG0280011053.01 | MsG0380016598.01 | 0.824543 | 7.625453e-54 | 6.775055e-51 |
| MsG0280011053.01 | MsG0380016644.01 | 0.854570 | 1.126929e-61 | 2.527797e-58 |
| MsG0280011053.01 | MsG0380017101.01 | 0.815908 | 7.262960e-52 | 5.072118e-49 |
| MsG0280011053.01 | MsG0380017158.01 | 0.821618 | 3.669429e-53 | 3.000221e-50 |
| MsG0280011053.01 | MsG0380017386.01 | 0.822558 | 2.221627e-53 | 1.866022e-50 |
| MsG0280011053.01 | MsG0380018026.01 | 0.819391 | 1.190142e-52 | 9.146130e-50 |
| MsG0280011053.01 | MsG0480018500.01 | 0.852184 | 5.453370e-61 | 1.130373e-57 |
| MsG0280011053.01 | MsG0480018807.01 | 0.815779 | 7.759880e-52 | 5.400830e-49 |
| MsG0280011053.01 | MsG0480018904.01 | 0.867924 | 9.561632e-66 | 3.395810e-62 |
| MsG0280011053.01 | MsG0480018998.01 | 0.800995 | 1.109295e-48 | 5.239166e-46 |
| MsG0280011053.01 | MsG0480019295.01 | 0.803791 | 2.945004e-49 | 1.493451e-46 |
| MsG0280011053.01 | MsG0480019880.01 | 0.832990 | 6.896787e-56 | 7.837143e-53 |
| MsG0280011053.01 | MsG0480020219.01 | 0.852784 | 3.677389e-61 | 7.771669e-58 |
| MsG0280011053.01 | MsG0480020428.01 | 0.822087 | 2.858052e-53 | 2.368229e-50 |
| MsG0280011053.01 | MsG0480020444.01 | 0.864946 | 8.433163e-65 | 2.695695e-61 |
| MsG0280011053.01 | MsG0480021132.01 | 0.804624 | 1.975562e-49 | 1.023469e-46 |
| MsG0280011053.01 | MsG0480021135.01 | 0.846577 | 1.990907e-59 | 3.442079e-56 |
| MsG0280011053.01 | MsG0480022125.01 | 0.853661 | 2.062249e-61 | 4.488959e-58 |
| MsG0280011053.01 | MsG0480022274.01 | 0.811204 | 7.870867e-51 | 4.842018e-48 |
| MsG0280011053.01 | MsG0480022486.01 | 0.846666 | 1.881517e-59 | 3.262738e-56 |
| MsG0280011053.01 | MsG0480022507.01 | 0.818818 | 1.607559e-52 | 1.215958e-49 |
| MsG0280011053.01 | MsG0480022508.01 | 0.824473 | 7.919346e-54 | 7.021369e-51 |
| MsG0280011053.01 | MsG0480022520.01 | 0.805580 | 1.246401e-49 | 6.618195e-47 |
| MsG0280011053.01 | MsG0480022607.01 | 0.808392 | 3.167541e-50 | 1.809017e-47 |
| MsG0280011053.01 | MsG0480022736.01 | 0.817880 | 2.620673e-52 | 1.931814e-49 |
| MsG0280011053.01 | MsG0480022760.01 | 0.815359 | 9.625479e-52 | 6.621959e-49 |
| MsG0280011053.01 | MsG0480022987.01 | 0.802331 | 5.903386e-49 | 2.884008e-46 |
| MsG0280011053.01 | MsG0480023318.01 | 0.840293 | 9.487449e-58 | 1.345318e-54 |
| MsG0280011053.01 | MsG0480023947.01 | 0.852749 | 3.763943e-61 | 7.944248e-58 |
| MsG0280011053.01 | MsG0580024154.01 | 0.812534 | 4.038856e-51 | 2.574604e-48 |
| MsG0280011053.01 | MsG0580024407.01 | 0.815479 | 9.053796e-52 | 6.249582e-49 |
| MsG0280011053.01 | MsG0580024999.01 | 0.806637 | 7.467584e-50 | 4.073621e-47 |
| MsG0280011053.01 | MsG0580025338.01 | 0.817969 | 2.502234e-52 | 1.848907e-49 |
| MsG0280011053.01 | MsG0580025860.01 | 0.832804 | 7.667500e-56 | 8.663746e-53 |
| MsG0280011053.01 | MsG0580025876.01 | 0.844042 | 9.655185e-59 | 1.539706e-55 |
| MsG0280011053.01 | MsG0580027073.01 | 0.840836 | 6.839931e-58 | 9.864115e-55 |
| MsG0280011053.01 | MsG0580027227.01 | 0.856463 | 3.162503e-62 | 7.555105e-59 |
| MsG0280011053.01 | MsG0580027847.01 | 0.800778 | 1.228717e-48 | 5.770549e-46 |
| MsG0280011053.01 | MsG0580028051.01 | 0.832206 | 1.079084e-55 | 1.197791e-52 |
| MsG0280011053.01 | MsG0580028355.01 | 0.814106 | 1.824360e-51 | 1.213110e-48 |
| MsG0280011053.01 | MsG0580028416.01 | 0.843729 | 1.171461e-58 | 1.849685e-55 |
| MsG0280011053.01 | MsG0580028560.01 | 0.831891 | 1.290460e-55 | 1.419561e-52 |
| MsG0280011053.01 | MsG0580028758.01 | 0.806288 | 8.846907e-50 | 4.783631e-47 |
| MsG0280011053.01 | MsG0580028999.01 | 0.811327 | 7.400608e-51 | 4.567313e-48 |
| MsG0280011053.01 | MsG0580029555.01 | 0.807017 | 6.207707e-50 | 3.419899e-47 |
| MsG0280011053.01 | MsG0580029583.01 | 0.825351 | 4.914217e-54 | 4.468140e-51 |
| MsG0280011053.01 | MsG0580029901.01 | 0.809038 | 2.305621e-50 | 1.339281e-47 |
| MsG0280011053.01 | MsG0580029906.01 | 0.830250 | 3.263895e-55 | 3.420337e-52 |
| MsG0280011053.01 | MsG0580029930.01 | 0.881155 | 3.035239e-70 | 1.758783e-66 |
| MsG0280011053.01 | MsG0680030996.01 | 0.822240 | 2.633149e-53 | 2.191513e-50 |
| MsG0280011053.01 | MsG0680031429.01 | 0.872612 | 2.781255e-67 | 1.171323e-63 |
| MsG0280011053.01 | MsG0680031802.01 | 0.815775 | 7.778960e-52 | 5.413367e-49 |
| MsG0280011053.01 | MsG0680034852.01 | 0.821341 | 4.250365e-53 | 3.448644e-50 |
| MsG0280011053.01 | MsG0680034919.01 | 0.813040 | 3.129987e-51 | 2.022019e-48 |
| MsG0280011053.01 | MsG0680035496.01 | 0.861090 | 1.309576e-63 | 3.661121e-60 |
| MsG0280011053.01 | MsG0680035741.01 | 0.801966 | 7.015036e-49 | 3.395111e-46 |
| MsG0280011053.01 | MsG0780036514.01 | 0.841525 | 4.507161e-58 | 6.640829e-55 |
| MsG0280011053.01 | MsG0780037258.01 | 0.814798 | 1.282122e-51 | 8.686959e-49 |
| MsG0280011053.01 | MsG0780038118.01 | 0.811472 | 6.884237e-51 | 4.265255e-48 |
| MsG0280011053.01 | MsG0780038123.01 | 0.861090 | 1.309292e-63 | 3.660372e-60 |
| MsG0280011053.01 | MsG0780038135.01 | 0.846638 | 1.915179e-59 | 3.317936e-56 |
| MsG0280011053.01 | MsG0780038444.01 | 0.822848 | 1.901693e-53 | 1.610420e-50 |
| MsG0280011053.01 | MsG0780038515.01 | 0.876435 | 1.400126e-68 | 6.787977e-65 |
| MsG0280011053.01 | MsG0780038925.01 | 0.834688 | 2.592985e-56 | 3.099822e-53 |
| MsG0280011053.01 | MsG0780039334.01 | 0.815092 | 1.103475e-51 | 7.535814e-49 |
| MsG0280011053.01 | MsG0780039450.01 | 0.842939 | 1.903861e-58 | 2.931883e-55 |
| MsG0280011053.01 | MsG0780039472.01 | 0.863692 | 2.075818e-64 | 6.349770e-61 |
| MsG0280011053.01 | MsG0780039877.01 | 0.823803 | 1.137601e-53 | 9.897594e-51 |
| MsG0280011053.01 | MsG0780040060.01 | 0.842469 | 2.537630e-58 | 3.851624e-55 |
| MsG0280011053.01 | MsG0780040144.01 | 0.831916 | 1.272230e-55 | 1.400468e-52 |
| MsG0280011053.01 | MsG0780040480.01 | 0.837523 | 4.944312e-57 | 6.439775e-54 |
| MsG0280011053.01 | MsG0780040609.01 | 0.816919 | 4.314806e-52 | 3.097896e-49 |
| MsG0280011053.01 | MsG0780041380.01 | 0.814131 | 1.801350e-51 | 1.198662e-48 |
| MsG0280011053.01 | MsG0780041556.01 | 0.830595 | 2.687436e-55 | 2.844503e-52 |
| MsG0280011053.01 | MsG0780041589.01 | 0.850539 | 1.590553e-60 | 3.125755e-57 |
| MsG0280011053.01 | MsG0880041985.01 | 0.855702 | 5.285356e-62 | 1.231055e-58 |
| MsG0280011053.01 | MsG0880042320.01 | 0.824708 | 6.971199e-54 | 6.223948e-51 |
| MsG0280011053.01 | MsG0880042368.01 | 0.875899 | 2.140733e-68 | 1.017279e-64 |
| MsG0280011053.01 | MsG0880042843.01 | 0.852553 | 4.280431e-61 | 8.976520e-58 |
| MsG0280011053.01 | MsG0880043094.01 | 0.835148 | 1.986255e-56 | 2.407748e-53 |
| MsG0280011053.01 | MsG0880043285.01 | 0.815531 | 8.812269e-52 | 6.091293e-49 |
| MsG0280011053.01 | MsG0880043715.01 | 0.825255 | 5.179439e-54 | 4.696549e-51 |
| MsG0280011053.01 | MsG0880043824.01 | 0.846732 | 1.805167e-59 | 3.136948e-56 |
| MsG0280011053.01 | MsG0880044037.01 | 0.824055 | 9.932097e-54 | 8.701400e-51 |
| MsG0280011053.01 | MsG0880044669.01 | 0.881022 | 3.390004e-70 | 1.954076e-66 |
| MsG0280011053.01 | MsG0880045277.01 | 0.833779 | 4.383642e-56 | 5.100308e-53 |
| MsG0280011053.01 | MsG0880045441.01 | 0.855369 | 6.605996e-62 | 1.521882e-58 |
| MsG0280011053.01 | MsG0880045861.01 | 0.856873 | 2.396293e-62 | 5.802137e-59 |
| MsG0280011053.01 | MsG0880046226.01 | 0.808378 | 3.189041e-50 | 1.820636e-47 |
| MsG0280011053.01 | MsG0880046467.01 | 0.815431 | 9.278563e-52 | 6.395907e-49 |
| MsG0280011053.01 | MsG0880046586.01 | 0.821297 | 4.352535e-53 | 3.527050e-50 |
| MsG0280011053.01 | MsG0880046642.01 | 0.861323 | 1.111860e-63 | 3.134139e-60 |
| MsG0280011053.01 | MsG0880046753.01 | 0.800874 | 1.174109e-48 | 5.528035e-46 |
| MsG0280011053.01 | MsG0880046975.01 | 0.838415 | 2.915694e-57 | 3.902561e-54 |
| MsG0280011053.01 | MsG0880046996.01 | 0.805589 | 1.241086e-49 | 6.591474e-47 |
| MsG0280011053.01 | MsG0880047081.01 | 0.879327 | 1.364093e-69 | 7.365401e-66 |
| MsG0280011053.01 | MsG0880047233.01 | 0.827116 | 1.868738e-54 | 1.787148e-51 |
| MsG0280011053.01 | MsG0880047486.01 | 0.811585 | 6.504062e-51 | 4.041611e-48 |
| MsG0280011053.01 | MsG0880047491.01 | 0.815656 | 8.266684e-52 | 5.733880e-49 |
| MsG0280006704.01 | MsG0280011053.01 | 0.815358 | 9.632201e-52 | 6.626361e-49 |
| MsG0280007272.01 | MsG0280011053.01 | 0.855889 | 4.658919e-62 | 1.091805e-58 |
| MsG0280007351.01 | MsG0280011053.01 | 0.817705 | 2.870382e-52 | 2.105736e-49 |
| MsG0280007369.01 | MsG0280011053.01 | 0.871296 | 7.616471e-67 | 3.056748e-63 |
| MsG0280007391.01 | MsG0280011053.01 | 0.869249 | 3.567635e-66 | 1.329702e-62 |
| MsG0280007751.01 | MsG0280011053.01 | 0.850047 | 2.186035e-60 | 4.228017e-57 |
| MsG0280008117.01 | MsG0280011053.01 | 0.834492 | 2.904892e-56 | 3.453042e-53 |
| MsG0280008219.01 | MsG0280011053.01 | 0.800528 | 1.381646e-48 | 6.447893e-46 |
| MsG0280008747.01 | MsG0280011053.01 | 0.813564 | 2.401745e-51 | 1.573787e-48 |
| MsG0280009394.01 | MsG0280011053.01 | 0.826210 | 3.073974e-54 | 2.864165e-51 |
| MsG0280009717.01 | MsG0280011053.01 | 0.824527 | 7.692571e-54 | 6.831382e-51 |
| MsG0280009859.01 | MsG0280011053.01 | 0.801869 | 7.344055e-49 | 3.545902e-46 |
| MsG0280009899.01 | MsG0280011053.01 | 0.800410 | 1.460154e-48 | 6.794280e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011053.01.T01 | MTR_2g098070 | 71.429 | 98 | 27 | 1 | 74 | 170 | 265 | 362 | 5.33e-36 | 128 |
| MsG0280011053.01.T01 | MTR_2g098070 | 54.737 | 95 | 9 | 2 | 1 | 62 | 68 | 161 | 3.25e-14 | 69.3 |
| MsG0280011053.01.T01 | MTR_8g036880 | 50.365 | 137 | 46 | 4 | 39 | 170 | 280 | 399 | 1.74e-30 | 114 |
| MsG0280011053.01.T01 | MTR_8g036880 | 54.762 | 84 | 5 | 1 | 1 | 51 | 104 | 187 | 2.00e-19 | 84.3 |
| MsG0280011053.01.T01 | MTR_3g028590 | 59.804 | 102 | 32 | 2 | 74 | 170 | 296 | 393 | 6.49e-30 | 112 |
| MsG0280011053.01.T01 | MTR_3g028590 | 53.571 | 84 | 6 | 1 | 1 | 51 | 99 | 182 | 5.08e-19 | 83.2 |
| MsG0280011053.01.T01 | MTR_3g028590 | 59.804 | 102 | 32 | 2 | 74 | 170 | 292 | 389 | 6.83e-30 | 112 |
| MsG0280011053.01.T01 | MTR_3g028590 | 53.571 | 84 | 6 | 1 | 1 | 51 | 95 | 178 | 5.02e-19 | 83.2 |
| MsG0280011053.01.T01 | MTR_4g078545 | 54.082 | 98 | 44 | 1 | 74 | 170 | 274 | 371 | 2.98e-26 | 102 |
| MsG0280011053.01.T01 | MTR_4g078545 | 53.571 | 84 | 6 | 1 | 1 | 51 | 77 | 160 | 6.25e-19 | 82.8 |
| MsG0280011053.01.T01 | MTR_8g107270 | 34.965 | 143 | 51 | 3 | 1 | 110 | 20 | 153 | 1.35e-13 | 67.4 |
| MsG0280011053.01.T01 | MTR_8g107270 | 54.902 | 51 | 23 | 0 | 75 | 125 | 218 | 268 | 2.95e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011053.01.T01 | AT4G28390 | 59.804 | 102 | 32 | 2 | 74 | 170 | 282 | 379 | 1.41e-30 | 114 |
| MsG0280011053.01.T01 | AT4G28390 | 52.632 | 95 | 11 | 2 | 1 | 62 | 85 | 178 | 4.28e-20 | 86.3 |
| MsG0280011053.01.T01 | AT4G28390 | 59.804 | 102 | 32 | 2 | 74 | 170 | 282 | 379 | 1.41e-30 | 114 |
| MsG0280011053.01.T01 | AT4G28390 | 52.632 | 95 | 11 | 2 | 1 | 62 | 85 | 178 | 4.28e-20 | 86.3 |
| MsG0280011053.01.T01 | AT3G08580 | 58.824 | 102 | 33 | 2 | 74 | 170 | 284 | 381 | 7.05e-30 | 112 |
| MsG0280011053.01.T01 | AT3G08580 | 55.952 | 84 | 4 | 1 | 1 | 51 | 86 | 169 | 1.40e-19 | 84.7 |
| MsG0280011053.01.T01 | AT3G08580 | 58.824 | 102 | 33 | 2 | 74 | 170 | 284 | 381 | 7.05e-30 | 112 |
| MsG0280011053.01.T01 | AT3G08580 | 55.952 | 84 | 4 | 1 | 1 | 51 | 86 | 169 | 1.40e-19 | 84.7 |
| MsG0280011053.01.T01 | AT5G13490 | 60.204 | 98 | 38 | 1 | 74 | 170 | 288 | 385 | 8.70e-30 | 112 |
| MsG0280011053.01.T01 | AT5G13490 | 53.571 | 84 | 6 | 1 | 1 | 51 | 90 | 173 | 5.04e-19 | 83.2 |
| MsG0280011053.01.T01 | AT5G13490 | 60.204 | 98 | 38 | 1 | 74 | 170 | 288 | 385 | 8.70e-30 | 112 |
| MsG0280011053.01.T01 | AT5G13490 | 53.571 | 84 | 6 | 1 | 1 | 51 | 90 | 173 | 5.04e-19 | 83.2 |
| MsG0280011053.01.T01 | AT5G17400 | 55.769 | 52 | 23 | 0 | 75 | 126 | 214 | 265 | 3.55e-15 | 72.0 |
Find 36 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTTTGAAGAGAGATTT+TGG | 0.201047 | 2:-78919999 | None:intergenic |
| AATAGAGAGCTTGTTTAAAA+AGG | 0.240355 | 2:+78920360 | MsG0280011053.01.T01:three_prime_UTR |
| GTAGGCTCTCTGAGCCTTAC+AGG | 0.277688 | 2:+78918477 | MsG0280011053.01.T01:CDS |
| CTTCGAGCAGTTGCTGGTGC+TGG | 0.280537 | 2:+78920034 | MsG0280011053.01.T01:CDS |
| CTTATGTTGGGAAAGAAATA+TGG | 0.285268 | 2:+78920087 | MsG0280011053.01.T01:CDS |
| AGCGAGAGAGAGATGGATAT+TGG | 0.374270 | 2:+78918757 | MsG0280011053.01.T01:CDS |
| TGTAAAGTACAAGAGTTCTT+TGG | 0.375179 | 2:+78919945 | MsG0280011053.01.T01:CDS |
| AAATCAAGATGAGATGATTA+AGG | 0.376906 | 2:+78918451 | MsG0280011053.01.T01:CDS |
| AGAAGCTTCACGCGCTCAAT+AGG | 0.386608 | 2:-78918422 | None:intergenic |
| CTTGCAAGCTAGTAAACTTC+AGG | 0.403889 | 2:+78920062 | MsG0280011053.01.T01:CDS |
| AAACTTCAGGTGCTTATGTT+GGG | 0.434356 | 2:+78920075 | MsG0280011053.01.T01:CDS |
| TAGCTAGCTTTGCCCTAGGA+TGG | 0.434987 | 2:+78919842 | MsG0280011053.01.T01:CDS |
| GGATATTGGAAAGTCTTTGC+AGG | 0.443053 | 2:+78918771 | MsG0280011053.01.T01:CDS |
| CAACTGTAACAGCCCATCCT+AGG | 0.444717 | 2:-78919855 | None:intergenic |
| AAACATCTTCGAGCAGTTGC+TGG | 0.456566 | 2:+78920028 | MsG0280011053.01.T01:CDS |
| TTCGAGCAGTTGCTGGTGCT+GGG | 0.460051 | 2:+78920035 | MsG0280011053.01.T01:CDS |
| TTGGGAAAGAAATATGGTTC+TGG | 0.461893 | 2:+78920093 | MsG0280011053.01.T01:CDS |
| TTTGCAGGAAATATTGCATC+TGG | 0.462558 | 2:+78918786 | MsG0280011053.01.T01:CDS |
| ACAATCTCCAATACCCTGTA+AGG | 0.464717 | 2:-78918491 | None:intergenic |
| TAAACTTCAGGTGCTTATGT+TGG | 0.474875 | 2:+78920074 | MsG0280011053.01.T01:CDS |
| AGCTAGCTTTGCCCTAGGAT+GGG | 0.478146 | 2:+78919843 | MsG0280011053.01.T01:CDS |
| AAATCTCTCTTCAAAGGTGC+TGG | 0.485223 | 2:+78920002 | MsG0280011053.01.T01:CDS |
| TTCCTAGCTAGCTTTGCCCT+AGG | 0.508251 | 2:+78919838 | MsG0280011053.01.T01:CDS |
| AGAAGAATGATGATGACATC+AGG | 0.514497 | 2:+78919916 | MsG0280011053.01.T01:CDS |
| CTTCTACGAACAGTGTCTAA+AGG | 0.537254 | 2:-78919898 | None:intergenic |
| ATCCTAGGGCAAAGCTAGCT+AGG | 0.537911 | 2:-78919840 | None:intergenic |
| CTCACAAATTGTGAAACTGA+AGG | 0.539625 | 2:+78919975 | MsG0280011053.01.T01:CDS |
| GGTCCAAAATCTCTCTTCAA+AGG | 0.557932 | 2:+78919996 | MsG0280011053.01.T01:CDS |
| CAAGATGAGATGATTAAGGC+TGG | 0.558576 | 2:+78918455 | MsG0280011053.01.T01:CDS |
| AACTTCAAGCGAGAGAGAGA+TGG | 0.568693 | 2:+78918750 | MsG0280011053.01.T01:CDS |
| ATGAAACTCGCATGATTGAA+CGG | 0.572318 | 2:+78920316 | MsG0280011053.01.T01:three_prime_UTR |
| CTAGGATGGGCTGTTACAGT+TGG | 0.574759 | 2:+78919856 | MsG0280011053.01.T01:CDS |
| GGAAAGAAATATGGTTCTGG+TGG | 0.583008 | 2:+78920096 | MsG0280011053.01.T01:CDS |
| ATGAGATGATTAAGGCTGGT+AGG | 0.586726 | 2:+78918459 | MsG0280011053.01.T01:CDS |
| TAGGCTCTCTGAGCCTTACA+GGG | 0.588635 | 2:+78918478 | MsG0280011053.01.T01:CDS |
| AACTGTAACAGCCCATCCTA+GGG | 0.595417 | 2:-78919854 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACTAAAAATCAAT+GGG | + | Chr2:78920903-78920922 | MsG0280011053.01.T01:intron | 10.0% |
| !!! | AAATTTTTAAAATATTGGTA+GGG | + | Chr2:78919597-78919616 | MsG0280011053.01.T01:intron | 10.0% |
| !!! | ATATTATTTTACAAAATTTC+AGG | + | Chr2:78919810-78919829 | MsG0280011053.01.T01:intron | 10.0% |
| !!! | GTCAAATTTTTTTTTTTTAA+AGG | + | Chr2:78920840-78920859 | MsG0280011053.01.T01:intron | 10.0% |
| !!! | TTCATTCTTTATTTTTTTTT+TGG | - | Chr2:78920301-78920320 | None:intergenic | 10.0% |
| !! | AAAAAAAATATATTGGAAAC+GGG | - | Chr2:78920994-78921013 | None:intergenic | 15.0% |
| !! | AAAAAAACTAAAAATCAATG+GGG | + | Chr2:78920904-78920923 | MsG0280011053.01.T01:intron | 15.0% |
| !! | CAAAAAAAATATATTGGAAA+CGG | - | Chr2:78920995-78921014 | None:intergenic | 15.0% |
| !! | GAAAAAAAACTAAAAATCAA+TGG | + | Chr2:78920902-78920921 | MsG0280011053.01.T01:intron | 15.0% |
| !! | TAGTAGAAAATTTAATCAAA+TGG | - | Chr2:78920459-78920478 | None:intergenic | 15.0% |
| !! | TATATTAAAAAGTAGAAAAC+CGG | + | Chr2:78919474-78919493 | MsG0280011053.01.T01:intron | 15.0% |
| !!! | AATTTTTAAAATATTGGTAG+GGG | + | Chr2:78919598-78919617 | MsG0280011053.01.T01:intron | 15.0% |
| !!! | CAAATTTTTAAAATATTGGT+AGG | + | Chr2:78919596-78919615 | MsG0280011053.01.T01:intron | 15.0% |
| !!! | GTTTCCAATATATTTTTTTT+GGG | + | Chr2:78920994-78921013 | MsG0280011053.01.T01:intron | 15.0% |
| !!! | TCGTCAAATTTTTAAAATAT+TGG | + | Chr2:78919592-78919611 | MsG0280011053.01.T01:intron | 15.0% |
| !! | AAAAAACTAAAAATCAATGG+GGG | + | Chr2:78920905-78920924 | MsG0280011053.01.T01:intron | 20.0% |
| !! | AAAGAGAAAAATGTTAGTTA+AGG | + | Chr2:78919239-78919258 | MsG0280011053.01.T01:intron | 20.0% |
| !! | AATTTGACGAAACAAAAATT+TGG | - | Chr2:78919582-78919601 | None:intergenic | 20.0% |
| !! | ATTATTGTTGTATTCATAGT+TGG | - | Chr2:78920561-78920580 | None:intergenic | 20.0% |
| !! | CTCAATCCAAAAATAAATTT+GGG | + | Chr2:78920608-78920627 | MsG0280011053.01.T01:intron | 20.0% |
| !! | GAAAAAACAAATTCAACTTT+AGG | + | Chr2:78921192-78921211 | MsG0280011053.01.T01:intron | 20.0% |
| !! | GAAACCCAAAAAAAATATAT+TGG | - | Chr2:78921001-78921020 | None:intergenic | 20.0% |
| !! | TAACATGATTAATCTATTAC+AGG | + | Chr2:78918687-78918706 | MsG0280011053.01.T01:intron | 20.0% |
| !! | TAATCTAATGGTAGAAAAAT+TGG | + | Chr2:78921324-78921343 | MsG0280011053.01.T01:intron | 20.0% |
| !!! | ACTGCATTAATTATTTCTTT+AGG | + | Chr2:78918614-78918633 | MsG0280011053.01.T01:intron | 20.0% |
| !!! | ATAGTTTGCTGAATATTTTT+TGG | + | Chr2:78920245-78920264 | MsG0280011053.01.T01:three_prime_UTR | 20.0% |
| !!! | CGTTTCCAATATATTTTTTT+TGG | + | Chr2:78920993-78921012 | MsG0280011053.01.T01:intron | 20.0% |
| !!! | TTTTCTCCCAAATTTATTTT+TGG | - | Chr2:78920617-78920636 | None:intergenic | 20.0% |
| !!! | TTTTCTTGAGAGATTAAAAT+TGG | + | Chr2:78921086-78921105 | MsG0280011053.01.T01:intron | 20.0% |
| ! | AAATCAAGATGAGATGATTA+AGG | + | Chr2:78918451-78918470 | MsG0280011053.01.T01:CDS | 25.0% |
| ! | AATCAAATGGTGCAAAAAAT+TGG | - | Chr2:78920446-78920465 | None:intergenic | 25.0% |
| ! | AATCAGAATGTGTTACAATT+AGG | + | Chr2:78919534-78919553 | MsG0280011053.01.T01:intron | 25.0% |
| ! | ATGATGAACCAATATTTGTA+AGG | - | Chr2:78920420-78920439 | None:intergenic | 25.0% |
| ! | GAGAAAAATGTTACAATTTC+TGG | + | Chr2:78920630-78920649 | MsG0280011053.01.T01:intron | 25.0% |
| ! | GCTCAATCCAAAAATAAATT+TGG | + | Chr2:78920607-78920626 | MsG0280011053.01.T01:intron | 25.0% |
| ! | TAATGCAGTGAAAATTTGAA+AGG | - | Chr2:78918603-78918622 | None:intergenic | 25.0% |
| ! | TAATGCTAGCATATCATATA+AGG | - | Chr2:78921390-78921409 | None:intergenic | 25.0% |
| ! | TAGATTAATCATGTTAGACT+TGG | - | Chr2:78918683-78918702 | None:intergenic | 25.0% |
| ! | TGATGAACCAATATTTGTAA+GGG | - | Chr2:78920419-78920438 | None:intergenic | 25.0% |
| !! | AATAGAGAGCTTGTTTAAAA+AGG | + | Chr2:78920360-78920379 | MsG0280011053.01.T01:three_prime_UTR | 25.0% |
| !! | AATATTTAGAGCAGCAAATT+TGG | - | Chr2:78919795-78919814 | None:intergenic | 25.0% |
| !! | ACTAAGACTTTAGGAATTAA+TGG | + | Chr2:78921157-78921176 | MsG0280011053.01.T01:intron | 25.0% |
| !!! | ACGATGTTTTAAATCCAAAT+CGG | + | Chr2:78919361-78919380 | MsG0280011053.01.T01:intron | 25.0% |
| !!! | ATTTCTGGTCATGATAATTT+TGG | + | Chr2:78920645-78920664 | MsG0280011053.01.T01:intron | 25.0% |
| !!! | TTACAAATATTGGTTCATCA+TGG | + | Chr2:78920419-78920438 | MsG0280011053.01.T01:intron | 25.0% |
| !!! | TTTCTGGTCATGATAATTTT+GGG | + | Chr2:78920646-78920665 | MsG0280011053.01.T01:intron | 25.0% |
| AAAACAGCAAGTTCAACAAA+TGG | + | Chr2:78920806-78920825 | MsG0280011053.01.T01:intron | 30.0% | |
| AAATGGACCCTTACAAATAT+TGG | + | Chr2:78920409-78920428 | MsG0280011053.01.T01:intron | 30.0% | |
| ACTGTAGTTGAACTATGATT+AGG | - | Chr2:78919407-78919426 | None:intergenic | 30.0% | |
| AGATTGTCTTACTATGGATT+TGG | + | Chr2:78919133-78919152 | MsG0280011053.01.T01:intron | 30.0% | |
| ATATTCACTCATAAGTGAGT+AGG | + | Chr2:78919336-78919355 | MsG0280011053.01.T01:intron | 30.0% | |
| CAAAAGTGAGATTCATAAGA+TGG | - | Chr2:78920684-78920703 | None:intergenic | 30.0% | |
| CCATAGTAAGACAATCTTTA+AGG | - | Chr2:78919130-78919149 | None:intergenic | 30.0% | |
| CCTCTTCTATTTATCCTTTA+AGG | - | Chr2:78919208-78919227 | None:intergenic | 30.0% | |
| CCTTAAAGATTGTCTTACTA+TGG | + | Chr2:78919127-78919146 | MsG0280011053.01.T01:intron | 30.0% | |
| CCTTAAAGGATAAATAGAAG+AGG | + | Chr2:78919205-78919224 | MsG0280011053.01.T01:intron | 30.0% | |
| CTTATGTTGGGAAAGAAATA+TGG | + | Chr2:78920087-78920106 | MsG0280011053.01.T01:CDS | 30.0% | |
| CTTGAGAGATTAAAATTGGT+GGG | + | Chr2:78921090-78921109 | MsG0280011053.01.T01:intron | 30.0% | |
| GCGAAAATGTAATTTAGACA+TGG | - | Chr2:78918640-78918659 | None:intergenic | 30.0% | |
| TATGATGGTTCCGTATAAAA+TGG | + | Chr2:78920392-78920411 | MsG0280011053.01.T01:intron | 30.0% | |
| TATTCACTCATAAGTGAGTA+GGG | + | Chr2:78919337-78919356 | MsG0280011053.01.T01:intron | 30.0% | |
| TCTTGAGAGATTAAAATTGG+TGG | + | Chr2:78921089-78921108 | MsG0280011053.01.T01:intron | 30.0% | |
| TGTAAAGTACAAGAGTTCTT+TGG | + | Chr2:78919945-78919964 | MsG0280011053.01.T01:CDS | 30.0% | |
| TTGTGGATAGTCTAATCTAA+TGG | + | Chr2:78921312-78921331 | MsG0280011053.01.T01:intron | 30.0% | |
| ! | AAAAGGTGTGTAGATTATGA+TGG | + | Chr2:78920377-78920396 | MsG0280011053.01.T01:intron | 30.0% |
| ! | AATTGTGTCAACATTTTCGA+CGG | - | Chr2:78919709-78919728 | None:intergenic | 30.0% |
| ! | ACTTTTCCATTTTGCTTTGT+GGG | + | Chr2:78921058-78921077 | MsG0280011053.01.T01:intron | 30.0% |
| ! | GATGAAGATTTTGAACATGA+CGG | + | Chr2:78919261-78919280 | MsG0280011053.01.T01:intron | 30.0% |
| ! | TTGATGGACAATAAGATTTG+TGG | + | Chr2:78921295-78921314 | MsG0280011053.01.T01:intron | 30.0% |
| ! | TTGTAAGGGTCCATTTTATA+CGG | - | Chr2:78920405-78920424 | None:intergenic | 30.0% |
| !! | AAAGTAACGGATAACATTGA+CGG | - | Chr2:78918568-78918587 | None:intergenic | 30.0% |
| AAACTTCAGGTGCTTATGTT+GGG | + | Chr2:78920075-78920094 | MsG0280011053.01.T01:CDS | 35.0% | |
| AATGAGAGAGAGTAATGAGT+TGG | + | Chr2:78921264-78921283 | MsG0280011053.01.T01:intron | 35.0% | |
| ACAATGAAAGGGATAGAGTT+GGG | - | Chr2:78920515-78920534 | None:intergenic | 35.0% | |
| ACAGTCCAAAATACAAACCA+CGG | - | Chr2:78919007-78919026 | None:intergenic | 35.0% | |
| ACCAATACGCAGAAAAAATG+TGG | + | Chr2:78919172-78919191 | MsG0280011053.01.T01:intron | 35.0% | |
| ACTATGTCGAAAATCCATTC+AGG | - | Chr2:78921223-78921242 | None:intergenic | 35.0% | |
| ACTTAACCCACAAAGCAAAA+TGG | - | Chr2:78921067-78921086 | None:intergenic | 35.0% | |
| ATCCAACGAGTAAACAAAGA+CGG | - | Chr2:78918835-78918854 | None:intergenic | 35.0% | |
| ATGAAACTCGCATGATTGAA+CGG | + | Chr2:78920316-78920335 | MsG0280011053.01.T01:three_prime_UTR | 35.0% | |
| ATGAAGGATTTACTTCGCTT+TGG | + | Chr2:78918532-78918551 | MsG0280011053.01.T01:intron | 35.0% | |
| ATTCACTCATAAGTGAGTAG+GGG | + | Chr2:78919338-78919357 | MsG0280011053.01.T01:intron | 35.0% | |
| CAAGAATGACTTGAATCAGA+TGG | + | Chr2:78918938-78918957 | MsG0280011053.01.T01:intron | 35.0% | |
| CACTAGTTCAATTTCCGATT+TGG | - | Chr2:78919378-78919397 | None:intergenic | 35.0% | |
| CCAATACGCAGAAAAAATGT+GGG | + | Chr2:78919173-78919192 | MsG0280011053.01.T01:intron | 35.0% | |
| CTCACAAATTGTGAAACTGA+AGG | + | Chr2:78919975-78919994 | MsG0280011053.01.T01:CDS | 35.0% | |
| GAAACCTGTGTTGAAAGTAA+CGG | - | Chr2:78918581-78918600 | None:intergenic | 35.0% | |
| GTAACACATTCTGATTGAAC+CGG | - | Chr2:78919530-78919549 | None:intergenic | 35.0% | |
| GTAACCTTATGAATTGCTAG+CGG | + | Chr2:78919659-78919678 | MsG0280011053.01.T01:intron | 35.0% | |
| GTAAGCTTCACTAAGACTTT+AGG | + | Chr2:78921148-78921167 | MsG0280011053.01.T01:intron | 35.0% | |
| GTAGAAAAATTGGTCCATCA+TGG | + | Chr2:78921334-78921353 | MsG0280011053.01.T01:intron | 35.0% | |
| GTAGTTGAACTATGATTAGG+AGG | - | Chr2:78919404-78919423 | None:intergenic | 35.0% | |
| GTCGAAAATGTTGACACAAT+TGG | + | Chr2:78919708-78919727 | MsG0280011053.01.T01:intron | 35.0% | |
| TAAAAATCAATGGGGGAAGA+TGG | + | Chr2:78920912-78920931 | MsG0280011053.01.T01:intron | 35.0% | |
| TAAACTTCAGGTGCTTATGT+TGG | + | Chr2:78920074-78920093 | MsG0280011053.01.T01:CDS | 35.0% | |
| TACAATGAAAGGGATAGAGT+TGG | - | Chr2:78920516-78920535 | None:intergenic | 35.0% | |
| TGGAAGAACAGTTAAGATGA+AGG | + | Chr2:78918516-78918535 | MsG0280011053.01.T01:intron | 35.0% | |
| TGTTGACACAATTGGAGTAT+TGG | + | Chr2:78919716-78919735 | MsG0280011053.01.T01:intron | 35.0% | |
| TTGGGAAAGAAATATGGTTC+TGG | + | Chr2:78920093-78920112 | MsG0280011053.01.T01:CDS | 35.0% | |
| TTTGCAGGAAATATTGCATC+TGG | + | Chr2:78918786-78918805 | MsG0280011053.01.T01:CDS | 35.0% | |
| ! | AAGAGAGAAGGTACAATGAA+AGG | - | Chr2:78920527-78920546 | None:intergenic | 35.0% |
| ! | AGAAGAATGATGATGACATC+AGG | + | Chr2:78919916-78919935 | MsG0280011053.01.T01:CDS | 35.0% |
| ! | AGAGAGAAGGTACAATGAAA+GGG | - | Chr2:78920526-78920545 | None:intergenic | 35.0% |
| ! | CGCTTTGTTGTGTGTTAATT+AGG | + | Chr2:78918657-78918676 | MsG0280011053.01.T01:intron | 35.0% |
| ! | GACTTTTCCATTTTGCTTTG+TGG | + | Chr2:78921057-78921076 | MsG0280011053.01.T01:intron | 35.0% |
| ! | TGAGTTGGATTTGATGTTGA+TGG | + | Chr2:78921279-78921298 | MsG0280011053.01.T01:intron | 35.0% |
| ! | TTATCCGTTACTTTCAACAC+AGG | + | Chr2:78918574-78918593 | MsG0280011053.01.T01:intron | 35.0% |
| ! | TTTTCCGCTAGCAATTCATA+AGG | - | Chr2:78919666-78919685 | None:intergenic | 35.0% |
| !! | CTTATGAATCTCACTTTTGC+TGG | + | Chr2:78920685-78920704 | MsG0280011053.01.T01:intron | 35.0% |
| !! | TGAAGTCTTGTTTGTTCAAC+CGG | - | Chr2:78919496-78919515 | None:intergenic | 35.0% |
| AACTTTAGGCTTCACCTGAA+TGG | + | Chr2:78921206-78921225 | MsG0280011053.01.T01:intron | 40.0% | |
| AATTTGGACAGATCGCTGTT+TGG | - | Chr2:78919566-78919585 | None:intergenic | 40.0% | |
| ACAATCTCCAATACCCTGTA+AGG | - | Chr2:78918494-78918513 | None:intergenic | 40.0% | |
| AGACTTCAACCAGTTCAATC+CGG | + | Chr2:78919508-78919527 | MsG0280011053.01.T01:intron | 40.0% | |
| ATACGCAGAAAAAATGTGGG+AGG | + | Chr2:78919176-78919195 | MsG0280011053.01.T01:intron | 40.0% | |
| ATGAGATGATTAAGGCTGGT+AGG | + | Chr2:78918459-78918478 | MsG0280011053.01.T01:CDS | 40.0% | |
| CAAGATGAGATGATTAAGGC+TGG | + | Chr2:78918455-78918474 | MsG0280011053.01.T01:CDS | 40.0% | |
| CTTCTACGAACAGTGTCTAA+AGG | - | Chr2:78919901-78919920 | None:intergenic | 40.0% | |
| CTTGAATCAGATGGTATTGC+TGG | + | Chr2:78918947-78918966 | MsG0280011053.01.T01:intron | 40.0% | |
| CTTGCAAGCTAGTAAACTTC+AGG | + | Chr2:78920062-78920081 | MsG0280011053.01.T01:CDS | 40.0% | |
| GGATATTGGAAAGTCTTTGC+AGG | + | Chr2:78918771-78918790 | MsG0280011053.01.T01:CDS | 40.0% | |
| GGTCCAAAATCTCTCTTCAA+AGG | + | Chr2:78919996-78920015 | MsG0280011053.01.T01:CDS | 40.0% | |
| TACCTCAGGTTCAAGCTAAA+TGG | + | Chr2:78921362-78921381 | MsG0280011053.01.T01:intron | 40.0% | |
| TTGCATTCTCTTCTCTTCCT+TGG | - | Chr2:78921246-78921265 | None:intergenic | 40.0% | |
| ! | AAATCTCTCTTCAAAGGTGC+TGG | + | Chr2:78920002-78920021 | MsG0280011053.01.T01:CDS | 40.0% |
| ! | GTGGGAGGTTTTTACCTTAA+AGG | + | Chr2:78919191-78919210 | MsG0280011053.01.T01:intron | 40.0% |
| ! | TGGATTTTCGACATAGTCCA+AGG | + | Chr2:78921226-78921245 | MsG0280011053.01.T01:intron | 40.0% |
| ! | TTAGCTTGAACCTGAGGTAT+TGG | - | Chr2:78921361-78921380 | None:intergenic | 40.0% |
| ! | TTCCGTCTTTGTTTACTCGT+TGG | + | Chr2:78918830-78918849 | MsG0280011053.01.T01:intron | 40.0% |
| !! | GCACCTTTGAAGAGAGATTT+TGG | - | Chr2:78920002-78920021 | None:intergenic | 40.0% |
| !! | GGAAAGAAATATGGTTCTGG+TGG | + | Chr2:78920096-78920115 | MsG0280011053.01.T01:CDS | 40.0% |
| !! | GTGTACCGTGGTTTGTATTT+TGG | + | Chr2:78918999-78919018 | MsG0280011053.01.T01:intron | 40.0% |
| !!! | CAGGGTATTGGAGATTGTTT+TGG | + | Chr2:78918496-78918515 | MsG0280011053.01.T01:intron | 40.0% |
| !!! | CCCACATTTTTTCTGCGTAT+TGG | - | Chr2:78919176-78919195 | None:intergenic | 40.0% |
| !!! | CGTATTGGTTTTGACATGAG+AGG | - | Chr2:78919161-78919180 | None:intergenic | 40.0% |
| AAACATCTTCGAGCAGTTGC+TGG | + | Chr2:78920028-78920047 | MsG0280011053.01.T01:CDS | 45.0% | |
| AACTGTAACAGCCCATCCTA+GGG | - | Chr2:78919857-78919876 | None:intergenic | 45.0% | |
| AACTTCAAGCGAGAGAGAGA+TGG | + | Chr2:78918750-78918769 | MsG0280011053.01.T01:CDS | 45.0% | |
| AGCGAGAGAGAGATGGATAT+TGG | + | Chr2:78918757-78918776 | MsG0280011053.01.T01:CDS | 45.0% | |
| ATGTTGGTCATTGTGTACCG+TGG | + | Chr2:78918987-78919006 | MsG0280011053.01.T01:intron | 45.0% | |
| CTGATTGAACCGGATTGAAC+TGG | - | Chr2:78919520-78919539 | None:intergenic | 45.0% | |
| CTTTATCGCGGCTTCAATGT+TGG | + | Chr2:78918971-78918990 | MsG0280011053.01.T01:intron | 45.0% | |
| GAAGAGAGAGAGAAGAGAGA+AGG | - | Chr2:78920539-78920558 | None:intergenic | 45.0% | |
| GGTAGGGGCAGATTAAATCA+TGG | + | Chr2:78919613-78919632 | MsG0280011053.01.T01:intron | 45.0% | |
| TTCTCTTAAGCCAGTGCTCT+TGG | + | Chr2:78919032-78919051 | MsG0280011053.01.T01:intron | 45.0% | |
| ! | CAACATTTTCGACGGTAGAG+TGG | - | Chr2:78919701-78919720 | None:intergenic | 45.0% |
| !! | GGATTTACTTCGCTTTGGAG+AGG | + | Chr2:78918537-78918556 | MsG0280011053.01.T01:intron | 45.0% |
| !! | GGTATTGCTGGTCTTTATCG+CGG | + | Chr2:78918959-78918978 | MsG0280011053.01.T01:intron | 45.0% |
| !! | TGCCATTTAGCTTGAACCTG+AGG | - | Chr2:78921367-78921386 | None:intergenic | 45.0% |
| !!! | AAAAAACAATTTATTTTTTT+TGG | + | Chr2:78921026-78921045 | MsG0280011053.01.T01:intron | 5.0% |
| !!! | AAAAACAATTTATTTTTTTT+GGG | + | Chr2:78921027-78921046 | MsG0280011053.01.T01:intron | 5.0% |
| !!! | AAAATAAATTGTTTTTTTTT+AGG | - | Chr2:78921023-78921042 | None:intergenic | 5.0% |
| AGAAGCTTCACGCGCTCAAT+AGG | - | Chr2:78918425-78918444 | None:intergenic | 50.0% | |
| AGGTGGGAGAGGCAATTCAA+TGG | + | Chr2:78918900-78918919 | MsG0280011053.01.T01:intron | 50.0% | |
| ATCCTAGGGCAAAGCTAGCT+AGG | - | Chr2:78919843-78919862 | None:intergenic | 50.0% | |
| CAACTGTAACAGCCCATCCT+AGG | - | Chr2:78919858-78919877 | None:intergenic | 50.0% | |
| CCAAGTCCACGAAGAAAGGT+GGG | + | Chr2:78918884-78918903 | MsG0280011053.01.T01:intron | 50.0% | |
| CCATCATGGACCAATACCTC+AGG | + | Chr2:78921348-78921367 | MsG0280011053.01.T01:intron | 50.0% | |
| CTCTGAGCCTTACAGGGTAT+TGG | + | Chr2:78918484-78918503 | MsG0280011053.01.T01:intron | 50.0% | |
| CTTAAGCCAGTGCTCTTGGT+AGG | + | Chr2:78919036-78919055 | MsG0280011053.01.T01:intron | 50.0% | |
| GCTCTTGGTAGGAACGTTTC+AGG | + | Chr2:78919047-78919066 | MsG0280011053.01.T01:intron | 50.0% | |
| TAGGCTCTCTGAGCCTTACA+GGG | + | Chr2:78918478-78918497 | MsG0280011053.01.T01:CDS | 50.0% | |
| ! | AACGTTCCTACCAAGAGCAC+TGG | - | Chr2:78919045-78919064 | None:intergenic | 50.0% |
| !! | AGCTAGCTTTGCCCTAGGAT+GGG | + | Chr2:78919843-78919862 | MsG0280011053.01.T01:CDS | 50.0% |
| !! | CCTGAGGTATTGGTCCATGA+TGG | - | Chr2:78921351-78921370 | None:intergenic | 50.0% |
| !! | CTAGGATGGGCTGTTACAGT+TGG | + | Chr2:78919856-78919875 | MsG0280011053.01.T01:CDS | 50.0% |
| !! | TAGCTAGCTTTGCCCTAGGA+TGG | + | Chr2:78919842-78919861 | MsG0280011053.01.T01:CDS | 50.0% |
| !! | TTCCTAGCTAGCTTTGCCCT+AGG | + | Chr2:78919838-78919857 | MsG0280011053.01.T01:CDS | 50.0% |
| CCCACCTTTCTTCGTGGACT+TGG | - | Chr2:78918887-78918906 | None:intergenic | 55.0% | |
| GACGCCAAGTCCACGAAGAA+AGG | + | Chr2:78918880-78918899 | MsG0280011053.01.T01:intron | 55.0% | |
| GCCAAGTCCACGAAGAAAGG+TGG | + | Chr2:78918883-78918902 | MsG0280011053.01.T01:intron | 55.0% | |
| GTAGGCTCTCTGAGCCTTAC+AGG | + | Chr2:78918477-78918496 | MsG0280011053.01.T01:CDS | 55.0% | |
| TCCACGAAGAAAGGTGGGAG+AGG | + | Chr2:78918889-78918908 | MsG0280011053.01.T01:intron | 55.0% | |
| TTCGACGGTAGAGTGGCTTG+AGG | - | Chr2:78919694-78919713 | None:intergenic | 55.0% | |
| TTCGAGCAGTTGCTGGTGCT+GGG | + | Chr2:78920035-78920054 | MsG0280011053.01.T01:CDS | 55.0% | |
| !! | ATTGCATCTGGTGCTGCAGC+AGG | + | Chr2:78918798-78918817 | MsG0280011053.01.T01:intron | 55.0% |
| CTTCGAGCAGTTGCTGGTGC+TGG | + | Chr2:78920034-78920053 | MsG0280011053.01.T01:CDS | 60.0% | |
| GCCTCTCCCACCTTTCTTCG+TGG | - | Chr2:78918893-78918912 | None:intergenic | 60.0% | |
| TGGACTTGGCGTCGCTTGCA+AGG | - | Chr2:78918873-78918892 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 78918380 | 78921416 | 78918380 | ID=MsG0280011053.01;Name=MsG0280011053.01 |
| Chr2 | mRNA | 78918380 | 78921416 | 78918380 | ID=MsG0280011053.01.T01;Parent=MsG0280011053.01;Name=MsG0280011053.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.33|0.5|1|0.66|0.5|4|293|170 |
| Chr2 | exon | 78918380 | 78918499 | 78918380 | ID=MsG0280011053.01.T01:exon:17374;Parent=MsG0280011053.01.T01 |
| Chr2 | exon | 78918709 | 78918807 | 78918709 | ID=MsG0280011053.01.T01:exon:17375;Parent=MsG0280011053.01.T01 |
| Chr2 | exon | 78919832 | 78920394 | 78919832 | ID=MsG0280011053.01.T01:exon:17376;Parent=MsG0280011053.01.T01 |
| Chr2 | exon | 78921393 | 78921416 | 78921393 | ID=MsG0280011053.01.T01:exon:17377;Parent=MsG0280011053.01.T01 |
| Chr2 | CDS | 78918380 | 78918499 | 78918380 | ID=MsG0280011053.01.T01:cds;Parent=MsG0280011053.01.T01 |
| Chr2 | CDS | 78918709 | 78918807 | 78918709 | ID=MsG0280011053.01.T01:cds;Parent=MsG0280011053.01.T01 |
| Chr2 | CDS | 78919832 | 78920125 | 78919832 | ID=MsG0280011053.01.T01:cds;Parent=MsG0280011053.01.T01 |
| Chr2 | three_prime_UTR | 78920126 | 78920394 | 78920126 | ID=MsG0280011053.01.T01:three_prime_utr;Parent=MsG0280011053.01.T01 |
| Chr2 | three_prime_UTR | 78921393 | 78921416 | 78921393 | ID=MsG0280011053.01.T01:three_prime_utr;Parent=MsG0280011053.01.T01 |
| Gene Sequence |
| Protein sequence |
