AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028560.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028560.01.T01 MTR_5g074400 95.187 561 20 6 21 578 25 581 0.0 936
MsG0580028560.01.T01 MTR_3g031220 55.536 569 165 21 33 577 3 507 4.73e-172 498
MsG0580028560.01.T01 MTR_7g071120 48.178 494 204 14 104 577 30 491 3.96e-131 392
MsG0580028560.01.T01 MTR_3g031220 57.611 427 116 16 31 434 1 385 8.97e-129 382
MsG0580028560.01.T01 MTR_3g031220 62.903 62 22 1 414 475 198 258 1.25e-18 88.6
MsG0580028560.01.T01 MTR_4g013260 48.642 405 150 14 79 477 47 399 4.68e-104 323
MsG0580028560.01.T01 MTR_3g009470 43.871 465 182 13 78 478 110 559 1.40e-95 307
MsG0580028560.01.T01 MTR_3g009470 54.118 85 37 2 414 497 280 363 1.06e-17 87.4
MsG0580028560.01.T01 MTR_3g009470 47.253 91 44 3 221 308 477 566 3.39e-15 79.3
MsG0580028560.01.T01 MTR_5g094430 42.955 440 196 12 57 478 26 428 7.29e-91 290
MsG0580028560.01.T01 MTR_5g094430 50.649 77 24 2 414 490 200 262 4.38e-15 78.6
MsG0580028560.01.T01 MTR_3g056100 41.037 463 183 14 59 476 47 464 3.28e-90 290
MsG0580028560.01.T01 MTR_3g056100 52.000 75 22 2 414 488 243 303 1.64e-15 80.1
MsG0580028560.01.T01 MTR_3g056100 40.764 471 186 15 59 476 47 477 2.76e-89 288
MsG0580028560.01.T01 MTR_3g056100 42.056 107 47 3 414 520 243 334 1.40e-15 80.5
MsG0580028560.01.T01 MTR_7g080020 38.943 511 209 12 56 476 58 555 1.84e-86 285
MsG0580028560.01.T01 MTR_7g080020 59.701 67 26 1 414 480 280 345 9.71e-17 84.3
MsG0580028560.01.T01 MTR_7g080020 46.078 102 44 4 237 328 493 593 1.11e-15 80.9
MsG0580028560.01.T01 MTR_7g011820 40.329 486 211 14 33 491 53 486 2.83e-85 275
MsG0580028560.01.T01 MTR_3g056100 58.000 250 73 7 234 476 96 320 1.22e-84 271
MsG0580028560.01.T01 MTR_3g056100 52.000 75 22 2 414 488 99 159 1.92e-15 79.3
MsG0580028560.01.T01 MTR_3g056100 56.977 258 76 8 234 476 96 333 4.60e-84 270
MsG0580028560.01.T01 MTR_3g056100 42.056 107 47 3 414 520 99 190 9.67e-16 80.1
MsG0580028560.01.T01 MTR_5g094430 57.613 243 90 4 236 478 65 294 8.82e-84 268
MsG0580028560.01.T01 MTR_5g094430 39.496 119 50 3 199 295 171 289 2.05e-16 82.0
MsG0580028560.01.T01 MTR_5g094430 50.649 77 24 2 414 490 66 128 4.48e-15 77.8
MsG0580028560.01.T01 MTR_5g094430 57.613 243 90 4 236 478 87 316 1.10e-83 268
MsG0580028560.01.T01 MTR_5g094430 39.496 119 50 3 199 295 193 311 2.26e-16 82.0
MsG0580028560.01.T01 MTR_5g094430 50.649 77 24 2 414 490 88 150 4.66e-15 78.2
MsG0580028560.01.T01 MTR_5g042920 49.485 291 116 9 210 483 112 388 8.78e-79 255
MsG0580028560.01.T01 MTR_5g042920 41.667 120 64 4 217 332 298 415 1.11e-15 80.1
MsG0580028560.01.T01 MTR_7g080000 37.451 510 241 18 17 476 13 494 1.67e-78 262
MsG0580028560.01.T01 MTR_7g080000 47.222 108 50 5 413 516 233 337 2.08e-15 80.1
MsG0580028560.01.T01 MTR_7g100510 48.438 256 105 6 229 473 181 420 1.48e-74 244
MsG0580028560.01.T01 MTR_4g082580 48.617 253 83 6 232 483 140 346 6.09e-70 231
MsG0580028560.01.T01 MTR_3g009470 39.336 422 175 12 78 434 110 515 1.42e-65 223
MsG0580028560.01.T01 MTR_3g009470 54.118 85 37 2 414 497 280 363 4.34e-18 87.8
MsG0580028560.01.T01 MTR_5g097490 42.629 251 127 4 227 477 82 315 9.55e-53 185
MsG0580028560.01.T01 MTR_4g130900 36.977 311 167 9 174 476 132 421 5.80e-47 172
MsG0580028560.01.T01 MTR_5g097500 33.594 256 138 6 224 477 68 293 1.13e-36 139
MsG0580028560.01.T01 MTR_5g074200 49.645 141 64 4 208 346 192 327 1.19e-33 131
MsG0580028560.01.T01 MTR_5g074200 50.000 78 35 2 414 488 220 296 3.10e-16 80.5
MsG0580028560.01.T01 MTR_8g007270 60.870 92 34 1 379 470 121 210 2.60e-33 127
MsG0580028560.01.T01 MTR_8g007270 38.333 120 56 4 192 293 92 211 1.19e-15 77.0
MsG0580028560.01.T01 MTR_1g077780 61.798 89 33 1 395 483 43 130 3.45e-32 121
MsG0580028560.01.T01 MTR_1g077780 45.122 82 39 2 220 295 40 121 1.58e-15 74.3
MsG0580028560.01.T01 MTR_3g095080 66.216 74 25 0 397 470 151 224 1.09e-29 117
MsG0580028560.01.T01 MTR_3g095080 55.172 58 25 1 237 293 168 225 1.10e-14 74.3
MsG0580028560.01.T01 MTR_3g095080 66.216 74 25 0 397 470 127 200 1.35e-29 116
MsG0580028560.01.T01 MTR_3g095080 55.172 58 25 1 237 293 144 201 1.27e-14 73.6
MsG0580028560.01.T01 MTR_8g092140 65.333 75 25 1 397 470 142 216 3.19e-28 113
MsG0580028560.01.T01 MTR_8g092140 55.172 58 25 1 237 293 160 217 8.70e-15 74.7
MsG0580028560.01.T01 MTR_7g079010 54.444 90 41 0 381 470 108 197 5.35e-27 109
MsG0580028560.01.T01 MTR_7g079010 50.769 65 31 1 229 292 133 197 1.25e-14 73.6
MsG0580028560.01.T01 MTR_4g094588 47.581 124 51 2 371 480 122 245 1.50e-26 111
MsG0580028560.01.T01 MTR_4g094588 55.072 69 30 1 237 304 178 246 4.32e-16 80.1
MsG0580028560.01.T01 MTR_2g033820 62.338 77 29 0 398 474 187 263 4.38e-26 110
MsG0580028560.01.T01 MTR_2g033820 52.941 68 31 1 237 303 203 270 6.05e-15 77.4
MsG0580028560.01.T01 MTR_1g015140 60.526 76 29 1 395 470 84 158 6.62e-26 104
MsG0580028560.01.T01 MTR_1g015140 50.769 65 31 1 229 292 94 158 1.59e-14 72.0
MsG0580028560.01.T01 MTR_1g086790 53.846 91 42 0 398 488 142 232 9.75e-26 108
MsG0580028560.01.T01 MTR_1g086790 51.562 64 30 1 237 299 158 221 8.71e-14 73.2
MsG0580028560.01.T01 MTR_8g096730 47.059 102 54 0 389 490 45 146 9.94e-26 103
MsG0580028560.01.T01 MTR_8g096730 56.140 57 24 1 237 292 70 126 3.36e-15 73.6
MsG0580028560.01.T01 MTR_7g109800 52.747 91 43 0 398 488 129 219 9.98e-26 107
MsG0580028560.01.T01 MTR_7g109800 37.273 110 62 3 207 309 109 218 3.80e-14 73.9
MsG0580028560.01.T01 MTR_3g104750 51.190 84 41 0 387 470 77 160 1.09e-25 103
MsG0580028560.01.T01 MTR_3g104750 52.632 57 26 1 237 292 104 160 1.47e-13 69.3
MsG0580028560.01.T01 MTR_5g043880 54.878 82 37 0 389 470 99 180 1.32e-24 104
MsG0580028560.01.T01 MTR_5g043880 57.895 57 23 1 237 292 124 180 1.41e-12 68.9
MsG0580028560.01.T01 MTR_7g028415 54.321 81 37 0 405 485 84 164 1.59e-24 100
MsG0580028560.01.T01 MTR_7g028415 52.632 57 26 1 237 292 93 149 1.92e-13 68.9
MsG0580028560.01.T01 MTR_7g028710 54.321 81 37 0 405 485 84 164 1.59e-24 100
MsG0580028560.01.T01 MTR_7g028710 52.632 57 26 1 237 292 93 149 1.92e-13 68.9
MsG0580028560.01.T01 MTR_4g107970 45.946 111 52 3 367 473 132 238 2.02e-24 107
MsG0580028560.01.T01 MTR_4g107970 52.459 61 27 2 237 295 178 238 1.01e-13 74.3
MsG0580028560.01.T01 MTR_4g107970 45.946 111 52 3 367 473 209 315 5.57e-24 106
MsG0580028560.01.T01 MTR_4g107970 52.459 61 27 2 237 295 255 315 1.41e-13 73.9
MsG0580028560.01.T01 MTR_2g045360 49.020 102 50 2 376 475 172 273 8.88e-24 104
MsG0580028560.01.T01 MTR_2g045360 39.535 86 45 3 231 309 200 285 2.19e-11 66.6
MsG0580028560.01.T01 MTR_4g122530 58.442 77 32 0 398 474 192 268 1.07e-23 104
MsG0580028560.01.T01 MTR_4g122530 53.125 64 29 1 237 299 208 271 1.24e-14 76.6
MsG0580028560.01.T01 MTR_3g053330 47.727 88 45 1 387 473 224 311 1.20e-23 104
MsG0580028560.01.T01 MTR_3g053330 40.000 85 49 2 238 320 252 336 1.60e-13 73.6
MsG0580028560.01.T01 MTR_4g132430 52.381 84 39 1 393 475 106 189 1.33e-23 102
MsG0580028560.01.T01 MTR_4g132430 49.180 61 29 2 237 295 127 187 2.22e-12 69.3
MsG0580028560.01.T01 MTR_4g132430 52.381 84 39 1 393 475 240 323 7.28e-23 102
MsG0580028560.01.T01 MTR_4g132430 49.180 61 29 2 237 295 261 321 5.59e-12 68.6
MsG0580028560.01.T01 MTR_3g095040 54.667 75 34 0 400 474 104 178 8.75e-23 97.1
MsG0580028560.01.T01 MTR_3g095040 53.333 60 27 1 237 295 118 177 4.63e-13 68.9
MsG0580028560.01.T01 MTR_2g088000 52.381 84 39 1 393 475 328 411 1.17e-22 102
MsG0580028560.01.T01 MTR_2g088000 39.759 83 48 2 237 317 349 431 3.64e-12 69.7
MsG0580028560.01.T01 MTR_8g092010 53.425 73 34 0 401 473 95 167 1.34e-22 95.9
MsG0580028560.01.T01 MTR_8g092010 53.333 60 27 1 237 295 108 167 3.99e-13 68.6
MsG0580028560.01.T01 MTR_2g023930 53.165 79 36 1 396 473 287 365 1.36e-22 102
MsG0580028560.01.T01 MTR_2g023930 50.000 60 28 2 238 295 306 365 1.88e-12 70.5
MsG0580028560.01.T01 MTR_4g094412 53.165 79 36 1 398 475 218 296 1.86e-22 101
MsG0580028560.01.T01 MTR_4g094412 52.459 61 27 2 237 295 234 294 3.95e-13 72.4
MsG0580028560.01.T01 MTR_7g110720 48.837 86 43 1 398 482 173 258 1.93e-22 100
MsG0580028560.01.T01 MTR_7g110720 50.000 60 28 2 238 295 190 249 3.30e-12 68.9
MsG0580028560.01.T01 MTR_4g094412 53.165 79 36 1 398 475 227 305 1.94e-22 101
MsG0580028560.01.T01 MTR_4g094412 52.459 61 27 2 237 295 243 303 4.51e-13 72.0
MsG0580028560.01.T01 MTR_7g110720 48.837 86 43 1 398 482 200 285 2.13e-22 100
MsG0580028560.01.T01 MTR_7g110720 50.000 60 28 2 238 295 217 276 3.32e-12 69.3
MsG0580028560.01.T01 MTR_7g009730 55.000 80 31 2 392 470 201 276 7.77e-22 100
MsG0580028560.01.T01 MTR_7g009730 51.724 58 26 2 237 292 219 276 1.49e-11 67.4
MsG0580028560.01.T01 MTR_4g049790 46.237 93 49 1 384 475 282 374 4.57e-21 97.4
MsG0580028560.01.T01 MTR_4g049790 41.096 73 41 2 238 308 313 385 8.54e-11 65.1
MsG0580028560.01.T01 MTR_4g049760 37.879 132 81 1 344 474 220 351 6.34e-21 97.1
MsG0580028560.01.T01 MTR_4g094908 51.765 85 37 2 395 478 250 331 7.42e-21 94.4
MsG0580028560.01.T01 MTR_4g094908 50.000 58 27 2 238 293 267 324 1.03e-12 70.1
MsG0580028560.01.T01 MTR_1g078260 57.746 71 29 1 401 470 234 304 8.49e-21 96.3
MsG0580028560.01.T01 MTR_1g078260 50.847 59 27 2 237 293 247 305 5.26e-11 65.5
MsG0580028560.01.T01 MTR_1g009613 56.098 82 32 2 395 475 246 324 1.75e-20 93.6
MsG0580028560.01.T01 MTR_1g009613 54.386 57 24 2 238 292 263 319 9.75e-12 67.0
MsG0580028560.01.T01 MTR_7g062220 36.735 147 76 3 414 543 124 270 6.44e-20 91.3
MsG0580028560.01.T01 MTR_7g062220 63.158 57 20 1 237 292 124 180 9.61e-16 79.0
MsG0580028560.01.T01 MTR_6g086555 49.398 83 41 1 392 473 184 266 2.07e-19 91.3
MsG0580028560.01.T01 MTR_6g086555 37.168 113 53 5 235 329 204 316 1.26e-13 73.6
MsG0580028560.01.T01 MTR_6g046600 68.519 54 17 0 253 306 18 71 2.60e-19 84.3
MsG0580028560.01.T01 MTR_3g106060 53.425 73 31 3 401 470 123 195 2.83e-19 89.0
MsG0580028560.01.T01 MTR_3g106060 55.738 61 25 2 238 296 139 199 1.37e-15 78.2
MsG0580028560.01.T01 MTR_5g016610 51.899 79 37 1 395 472 180 258 5.52e-19 87.8
MsG0580028560.01.T01 MTR_5g016610 50.000 58 27 2 238 293 200 257 2.47e-12 68.2
MsG0580028560.01.T01 MTR_4g007060 43.396 106 49 4 384 484 103 202 1.37e-18 86.7
MsG0580028560.01.T01 MTR_4g007060 51.667 60 27 2 238 295 129 188 3.31e-14 73.9
MsG0580028560.01.T01 MTR_4g127040 48.276 87 44 1 394 479 225 311 1.85e-18 87.0
MsG0580028560.01.T01 MTR_1g013790 50.794 63 30 1 412 473 99 161 1.89e-18 85.9
MsG0580028560.01.T01 MTR_1g013790 38.889 90 45 3 226 305 82 171 2.56e-12 67.8
MsG0580028560.01.T01 MTR_4g007060 43.396 106 49 4 384 484 137 236 2.02e-18 87.0
MsG0580028560.01.T01 MTR_4g007060 51.667 60 27 2 238 295 163 222 4.81e-14 73.9
MsG0580028560.01.T01 MTR_2g105060 54.688 64 28 1 412 474 92 155 2.46e-18 85.1
MsG0580028560.01.T01 MTR_2g105060 50.000 60 28 2 238 295 95 154 6.44e-13 69.3
MsG0580028560.01.T01 MTR_5g091390 39.744 156 70 3 400 548 143 281 3.27e-18 86.3
MsG0580028560.01.T01 MTR_5g091390 52.239 67 31 1 237 302 157 223 8.58e-15 75.9
MsG0580028560.01.T01 MTR_2g105060 54.688 64 28 1 412 474 167 230 3.64e-18 86.3
MsG0580028560.01.T01 MTR_2g105060 50.000 60 28 2 238 295 170 229 8.16e-13 70.1
MsG0580028560.01.T01 MTR_1g013760 41.935 93 47 4 384 470 106 197 5.71e-18 85.1
MsG0580028560.01.T01 MTR_1g013760 50.877 57 26 2 238 292 141 197 1.73e-13 71.6
MsG0580028560.01.T01 MTR_3g108960 48.718 78 39 1 395 471 295 372 1.99e-16 82.0
MsG0580028560.01.T01 MTR_5g093540 40.323 124 50 5 227 346 146 249 2.41e-16 79.3
MsG0580028560.01.T01 MTR_1g070455 49.351 77 38 1 395 470 274 350 3.85e-16 80.9
MsG0580028560.01.T01 MTR_1g070455 54.237 59 25 2 238 294 294 352 3.23e-13 71.6
MsG0580028560.01.T01 MTR_4g047580 36.752 117 64 2 369 475 227 343 4.93e-16 81.6
MsG0580028560.01.T01 MTR_2g016770 52.381 63 29 1 415 476 36 98 2.86e-15 75.5
MsG0580028560.01.T01 MTR_2g016770 50.000 60 28 2 238 295 36 95 7.52e-12 65.5
MsG0580028560.01.T01 MTR_2g024350 53.226 62 28 1 415 475 9 70 3.10e-15 75.9
MsG0580028560.01.T01 MTR_2g024350 58.333 60 23 2 238 295 9 68 4.93e-15 75.1
MsG0580028560.01.T01 MTR_8g087000 40.000 90 51 2 415 501 78 167 3.22e-15 75.9
MsG0580028560.01.T01 MTR_8g087000 39.785 93 48 4 238 328 78 164 3.83e-12 67.0
MsG0580028560.01.T01 MTR_8g087000 40.000 90 51 2 415 501 77 166 3.45e-15 75.9
MsG0580028560.01.T01 MTR_8g087000 39.785 93 48 4 238 328 77 163 4.07e-12 67.0
MsG0580028560.01.T01 MTR_2g016770 52.381 63 29 1 415 476 28 90 3.59e-15 75.1
MsG0580028560.01.T01 MTR_2g016770 50.000 60 28 2 238 295 28 87 9.33e-12 65.1
MsG0580028560.01.T01 MTR_0117s0040 35.333 150 81 6 395 530 57 204 4.64e-15 75.5
MsG0580028560.01.T01 MTR_7g109600 34.513 113 61 2 387 486 14 126 1.08e-14 74.7
MsG0580028560.01.T01 MTR_7g109600 51.667 60 27 2 238 295 54 113 1.85e-11 65.1
MsG0580028560.01.T01 MTR_2g024380 58.333 60 23 2 238 295 252 311 1.57e-14 76.6
MsG0580028560.01.T01 MTR_2g024380 54.098 61 27 1 415 474 252 312 3.11e-14 75.9
MsG0580028560.01.T01 MTR_8g067650 53.125 64 28 2 234 295 336 399 6.45e-14 74.7
MsG0580028560.01.T01 MTR_8g067650 50.000 64 31 1 412 474 337 400 1.66e-12 70.5
MsG0580028560.01.T01 MTR_1g099600 38.947 95 56 2 395 488 167 260 7.85e-14 73.2
MsG0580028560.01.T01 MTR_1g099600 49.315 73 33 3 236 306 184 254 9.44e-13 69.7
MsG0580028560.01.T01 MTR_1g077760 67.500 40 13 0 395 434 95 134 2.65e-13 67.8
MsG0580028560.01.T01 MTR_8g067635 31.579 171 96 5 234 388 346 511 2.90e-13 72.8
MsG0580028560.01.T01 MTR_8g067635 50.000 64 31 1 412 474 347 410 1.16e-12 70.9
MsG0580028560.01.T01 MTR_2g032030 37.190 121 66 3 377 495 238 350 5.27e-13 72.0
MsG0580028560.01.T01 MTR_5g044695 54.167 48 22 0 393 440 56 103 5.40e-13 65.9
MsG0580028560.01.T01 MTR_2g083870 47.619 63 32 1 415 476 81 143 5.69e-13 69.7
MsG0580028560.01.T01 MTR_8g098945 43.243 74 41 1 413 485 128 201 5.95e-13 69.7
MsG0580028560.01.T01 MTR_8g098945 43.011 93 44 5 238 323 130 220 2.63e-12 67.8
MsG0580028560.01.T01 MTR_8g069935 44.578 83 44 2 236 316 330 412 6.75e-13 71.6
MsG0580028560.01.T01 MTR_8g069935 42.857 63 35 1 414 475 331 393 1.13e-11 67.8
MsG0580028560.01.T01 MTR_2g032030 37.190 121 66 3 377 495 238 350 7.22e-13 71.2
MsG0580028560.01.T01 MTR_8g028565 46.154 78 40 2 415 491 156 232 1.70e-12 69.3
MsG0580028560.01.T01 MTR_3g095080 63.415 41 15 0 397 437 151 191 1.78e-12 67.0
MsG0580028560.01.T01 MTR_3g090860 45.588 68 33 2 227 290 123 190 2.27e-12 68.9
MsG0580028560.01.T01 MTR_3g090860 50.847 59 26 1 413 468 132 190 6.21e-12 67.8
MsG0580028560.01.T01 MTR_8g099350 51.724 58 24 2 237 290 132 189 2.93e-12 68.9
MsG0580028560.01.T01 MTR_8g099350 32.308 130 60 3 414 540 132 236 3.76e-11 65.5
MsG0580028560.01.T01 MTR_5g067680 48.276 58 26 2 237 290 202 259 3.04e-12 68.9
MsG0580028560.01.T01 MTR_5g067680 48.276 58 27 1 414 468 202 259 1.39e-11 66.6
MsG0580028560.01.T01 MTR_7g079040 47.692 65 33 1 415 478 155 219 6.03e-12 67.4
MsG0580028560.01.T01 MTR_6g038890 54.167 48 22 0 393 440 167 214 1.52e-11 64.7
MsG0580028560.01.T01 MTR_4g007060 40.244 82 43 2 384 464 137 213 1.59e-11 65.1
MsG0580028560.01.T01 MTR_6g053200 29.412 119 72 3 414 527 330 441 2.29e-11 67.0
MsG0580028560.01.T01 MTR_8g027860 42.254 71 32 3 237 303 136 201 8.17e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028560.01.T01 AT2G38470 46.279 551 194 21 57 577 40 518 5.20e-112 344
MsG0580028560.01.T01 AT2G03340 44.394 437 188 14 58 493 108 490 1.78e-93 296
MsG0580028560.01.T01 AT5G07100 44.681 423 99 11 55 476 8 296 2.52e-93 289
MsG0580028560.01.T01 AT4G26640 41.627 418 222 7 74 483 7 410 7.87e-91 289
MsG0580028560.01.T01 AT4G26640 41.627 418 222 7 74 483 47 450 2.13e-90 289
MsG0580028560.01.T01 AT2G30250 43.750 464 163 14 33 475 3 389 2.35e-89 281
MsG0580028560.01.T01 AT2G30250 49.383 81 38 2 223 300 312 392 5.90e-16 80.5
MsG0580028560.01.T01 AT4G26640 54.440 259 99 5 231 483 29 274 3.03e-85 270
MsG0580028560.01.T01 AT4G26640 54.440 259 99 5 231 483 29 274 3.03e-85 270
MsG0580028560.01.T01 AT4G26640 54.440 259 99 5 231 483 29 274 3.03e-85 270
MsG0580028560.01.T01 AT4G26640 54.440 259 99 5 231 483 29 274 3.03e-85 270
MsG0580028560.01.T01 AT1G13960 41.958 429 173 10 58 473 103 468 3.34e-85 275
MsG0580028560.01.T01 AT4G26640 54.826 259 98 5 231 483 133 378 1.37e-84 272
MsG0580028560.01.T01 AT5G07100 57.438 242 41 5 236 476 23 203 2.29e-82 257
MsG0580028560.01.T01 AT5G07100 57.438 242 41 5 236 476 23 203 2.29e-82 257
MsG0580028560.01.T01 AT5G07100 57.438 242 41 5 236 476 23 203 2.29e-82 257
MsG0580028560.01.T01 AT5G07100 57.438 242 41 5 236 476 23 203 2.29e-82 257
MsG0580028560.01.T01 AT1G13960 51.724 261 102 4 226 473 66 315 5.75e-79 253
MsG0580028560.01.T01 AT4G26440 48.485 297 109 6 236 492 177 469 7.65e-75 249
MsG0580028560.01.T01 AT3G01080 51.261 238 78 4 236 473 204 403 1.13e-70 235
MsG0580028560.01.T01 AT3G01080 59.091 66 26 1 414 479 205 269 3.39e-17 85.1
MsG0580028560.01.T01 AT3G01080 47.674 86 42 2 213 295 318 403 6.23e-17 84.0
MsG0580028560.01.T01 AT3G01080 51.261 238 78 4 236 473 166 365 1.64e-70 233
MsG0580028560.01.T01 AT3G01080 59.091 66 26 1 414 479 167 231 3.93e-17 84.3
MsG0580028560.01.T01 AT3G01080 47.674 86 42 2 213 295 280 365 6.81e-17 83.6
MsG0580028560.01.T01 AT2G37260 48.864 264 102 6 229 472 77 327 1.15e-62 210
MsG0580028560.01.T01 AT2G37260 48.864 264 102 6 229 472 75 325 1.39e-62 210
MsG0580028560.01.T01 AT2G37260 48.864 264 102 6 229 472 157 407 8.03e-62 210
MsG0580028560.01.T01 AT2G04880 45.528 246 117 4 237 476 111 345 2.87e-61 210
MsG0580028560.01.T01 AT2G04880 54.688 64 28 1 412 475 109 171 2.23e-16 82.4
MsG0580028560.01.T01 AT2G04880 55.882 68 29 1 229 295 275 342 5.84e-16 81.3
MsG0580028560.01.T01 AT2G04880 43.446 267 116 6 237 476 111 369 1.23e-60 209
MsG0580028560.01.T01 AT2G04880 54.688 64 28 1 412 475 109 171 2.36e-16 82.4
MsG0580028560.01.T01 AT2G04880 55.882 68 29 1 229 295 299 366 6.16e-16 81.3
MsG0580028560.01.T01 AT4G30935 42.194 237 123 5 238 474 169 391 2.43e-48 175
MsG0580028560.01.T01 AT4G30935 50.000 70 34 1 238 306 332 401 2.48e-15 79.3
MsG0580028560.01.T01 AT5G56270 78.431 102 20 1 375 476 450 549 4.87e-47 176
MsG0580028560.01.T01 AT5G56270 39.648 227 119 4 85 300 117 336 7.12e-33 134
MsG0580028560.01.T01 AT5G56270 51.282 78 35 2 221 295 469 546 1.48e-15 80.5
MsG0580028560.01.T01 AT5G56270 60.000 60 23 1 414 473 273 331 1.75e-15 80.5
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.56e-45 174
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.66e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.58e-45 174
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.68e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.58e-45 174
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.68e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.61e-45 174
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 8.01e-12 68.9
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.62e-45 174
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.87e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.64e-45 173
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.61e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.69e-45 173
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.95e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.76e-45 173
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.59e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 1.76e-45 173
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 7.59e-12 69.3
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 391 594 2.14e-45 173
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 400 459 9.06e-12 68.9
MsG0580028560.01.T01 AT4G12020 47.143 210 104 4 226 434 458 661 3.51e-45 172
MsG0580028560.01.T01 AT4G12020 50.820 61 29 1 413 473 467 526 1.00e-11 68.6
MsG0580028560.01.T01 AT2G44745 60.215 93 36 1 379 470 109 201 1.20e-33 128
MsG0580028560.01.T01 AT2G44745 58.621 58 23 1 237 293 145 202 1.73e-15 76.3
MsG0580028560.01.T01 AT4G39410 64.474 76 27 0 395 470 204 279 4.46e-28 114
MsG0580028560.01.T01 AT4G39410 45.946 74 37 2 223 293 207 280 1.78e-13 72.0
MsG0580028560.01.T01 AT1G55600 60.241 83 33 0 393 475 286 368 7.59e-28 117
MsG0580028560.01.T01 AT1G55600 55.932 59 25 1 238 295 308 366 3.49e-14 75.5
MsG0580028560.01.T01 AT1G29860 51.376 109 42 2 381 478 93 201 1.07e-26 110
MsG0580028560.01.T01 AT1G29860 49.333 75 36 2 237 310 136 209 6.23e-15 75.9
MsG0580028560.01.T01 AT4G18170 62.338 77 29 0 398 474 156 232 1.77e-26 110
MsG0580028560.01.T01 AT4G18170 38.571 140 83 3 237 374 172 310 2.00e-14 75.1
MsG0580028560.01.T01 AT3G01080 70.312 64 19 0 236 299 204 267 3.01e-26 110
MsG0580028560.01.T01 AT3G01080 59.091 66 26 1 414 479 205 269 8.77e-18 85.1
MsG0580028560.01.T01 AT1G69310 60.256 78 31 0 393 470 126 203 5.86e-26 108
MsG0580028560.01.T01 AT1G69310 54.386 57 25 1 237 292 147 203 1.48e-12 68.9
MsG0580028560.01.T01 AT1G69310 60.256 78 31 0 393 470 126 203 5.86e-26 108
MsG0580028560.01.T01 AT1G69310 54.386 57 25 1 237 292 147 203 1.48e-12 68.9
MsG0580028560.01.T01 AT1G69310 60.256 78 31 0 393 470 126 203 5.86e-26 108
MsG0580028560.01.T01 AT1G69310 54.386 57 25 1 237 292 147 203 1.48e-12 68.9
MsG0580028560.01.T01 AT1G64000 59.211 76 31 0 395 470 95 170 1.40e-25 104
MsG0580028560.01.T01 AT1G64000 56.140 57 24 1 237 292 114 170 5.38e-15 74.3
MsG0580028560.01.T01 AT5G41570 59.211 76 31 0 395 470 79 154 1.55e-25 103
MsG0580028560.01.T01 AT5G41570 56.140 57 24 1 237 292 98 154 1.14e-14 72.8
MsG0580028560.01.T01 AT5G13080 59.722 72 29 0 401 472 54 125 7.84e-25 100
MsG0580028560.01.T01 AT5G13080 54.386 57 25 1 237 292 67 123 2.94e-15 73.6
MsG0580028560.01.T01 AT5G26170 58.571 70 29 0 401 470 100 169 8.89e-25 101
MsG0580028560.01.T01 AT5G26170 53.448 58 26 1 237 293 113 170 1.34e-14 72.4
MsG0580028560.01.T01 AT5G49520 61.728 81 30 1 398 477 205 285 9.80e-25 107
MsG0580028560.01.T01 AT5G49520 53.125 64 29 1 237 299 221 284 6.56e-14 74.3
MsG0580028560.01.T01 AT5G46350 52.688 93 44 0 400 492 169 261 1.34e-24 105
MsG0580028560.01.T01 AT5G46350 50.000 72 35 1 229 299 175 246 3.16e-13 71.6
MsG0580028560.01.T01 AT2G46130 53.571 84 39 0 387 470 3 86 2.36e-24 98.2
MsG0580028560.01.T01 AT2G46130 59.649 57 22 1 237 292 30 86 6.86e-16 74.3
MsG0580028560.01.T01 AT2G47260 59.211 76 31 0 398 473 158 233 3.18e-24 104
MsG0580028560.01.T01 AT2G47260 53.125 64 29 1 237 299 174 237 3.57e-14 74.3
MsG0580028560.01.T01 AT1G62300 42.657 143 68 5 345 473 230 372 3.91e-24 107
MsG0580028560.01.T01 AT1G62300 50.000 60 28 2 238 295 313 372 1.06e-11 68.2
MsG0580028560.01.T01 AT3G01970 62.500 72 27 0 401 472 52 123 6.63e-24 98.2
MsG0580028560.01.T01 AT3G01970 57.627 59 22 2 237 293 65 122 3.47e-13 67.8
MsG0580028560.01.T01 AT4G04450 52.809 89 41 1 388 475 172 260 6.64e-24 105
MsG0580028560.01.T01 AT4G04450 43.836 73 39 2 238 308 199 271 2.80e-12 69.3
MsG0580028560.01.T01 AT5G15130 53.846 78 35 1 397 473 168 245 1.10e-23 105
MsG0580028560.01.T01 AT5G15130 44.595 74 39 2 237 308 185 258 2.35e-12 70.1
MsG0580028560.01.T01 AT5G64810 57.746 71 30 0 401 471 97 167 1.29e-23 99.0
MsG0580028560.01.T01 AT5G64810 50.877 57 27 1 237 292 110 166 1.37e-12 67.4
MsG0580028560.01.T01 AT5G15130 53.846 78 35 1 397 473 210 287 1.50e-23 105
MsG0580028560.01.T01 AT5G15130 44.595 74 39 2 237 308 227 300 2.38e-12 70.1
MsG0580028560.01.T01 AT4G04450 52.809 89 41 1 388 475 266 354 2.94e-23 103
MsG0580028560.01.T01 AT4G04450 43.836 73 39 2 238 308 293 365 4.27e-12 69.3
MsG0580028560.01.T01 AT4G22070 51.724 87 41 1 388 473 271 357 8.80e-23 102
MsG0580028560.01.T01 AT4G22070 50.000 60 28 2 238 295 298 357 8.38e-12 68.2
MsG0580028560.01.T01 AT4G22070 51.724 87 41 1 388 473 271 357 8.80e-23 102
MsG0580028560.01.T01 AT4G22070 50.000 60 28 2 238 295 298 357 8.38e-12 68.2
MsG0580028560.01.T01 AT4G22070 51.724 87 41 1 388 473 271 357 8.80e-23 102
MsG0580028560.01.T01 AT4G22070 50.000 60 28 2 238 295 298 357 8.38e-12 68.2
MsG0580028560.01.T01 AT4G22070 51.724 87 41 1 388 473 271 357 8.80e-23 102
MsG0580028560.01.T01 AT4G22070 50.000 60 28 2 238 295 298 357 8.38e-12 68.2
MsG0580028560.01.T01 AT1G68150 53.165 79 36 1 398 475 219 297 1.86e-22 100
MsG0580028560.01.T01 AT1G68150 53.333 60 26 2 238 295 236 295 2.41e-13 72.4
MsG0580028560.01.T01 AT1G18860 52.564 78 36 1 397 473 222 299 1.46e-21 99.0
MsG0580028560.01.T01 AT1G18860 50.820 61 28 2 237 295 239 299 2.32e-11 67.0
MsG0580028560.01.T01 AT1G69310 56.410 78 30 1 393 470 126 199 2.74e-21 94.7
MsG0580028560.01.T01 AT3G62340 47.525 101 43 1 398 498 102 192 6.73e-21 93.6
MsG0580028560.01.T01 AT3G62340 50.000 74 35 2 237 308 118 191 2.34e-13 71.2
MsG0580028560.01.T01 AT4G01720 54.545 77 34 1 398 473 223 299 1.20e-20 95.9
MsG0580028560.01.T01 AT4G01720 37.037 108 60 4 196 295 192 299 1.58e-11 67.4
MsG0580028560.01.T01 AT2G46130 50.000 84 38 1 387 470 3 82 9.43e-20 85.1
MsG0580028560.01.T01 AT2G46130 54.386 57 21 2 237 292 30 82 2.29e-11 61.2
MsG0580028560.01.T01 AT4G31550 55.128 78 31 2 395 471 230 304 1.23e-19 90.9
MsG0580028560.01.T01 AT4G31550 49.333 75 36 2 238 310 247 321 6.38e-14 73.6
MsG0580028560.01.T01 AT4G31550 55.128 78 31 2 395 471 229 303 1.27e-19 90.5
MsG0580028560.01.T01 AT4G31550 49.333 75 36 2 238 310 246 320 6.68e-14 73.6
MsG0580028560.01.T01 AT2G21900 50.000 76 35 1 403 475 95 170 1.31e-19 87.8
MsG0580028560.01.T01 AT2G21900 46.269 67 35 1 237 302 109 175 8.44e-13 68.2
MsG0580028560.01.T01 AT2G24570 57.143 77 29 2 395 470 227 300 1.63e-19 90.1
MsG0580028560.01.T01 AT2G24570 54.386 57 24 2 238 292 244 300 4.31e-13 70.9
MsG0580028560.01.T01 AT2G23320 50.633 79 35 2 395 472 224 299 1.91e-19 90.1
MsG0580028560.01.T01 AT2G23320 53.448 58 25 2 238 293 241 298 1.65e-12 69.3
MsG0580028560.01.T01 AT4G24240 52.500 80 37 1 394 472 261 340 2.06e-19 90.5
MsG0580028560.01.T01 AT4G24240 53.448 58 25 2 238 293 282 339 3.36e-13 71.6
MsG0580028560.01.T01 AT4G31800 50.704 71 33 2 407 475 103 173 1.53e-18 85.9
MsG0580028560.01.T01 AT4G31800 38.776 98 55 4 228 321 100 196 1.61e-14 73.9
MsG0580028560.01.T01 AT1G80840 51.562 64 30 1 412 474 144 207 2.53e-18 86.3
MsG0580028560.01.T01 AT1G80840 53.333 60 26 2 238 295 147 206 3.41e-13 71.2
MsG0580028560.01.T01 AT4G31800 50.704 71 33 2 407 475 168 238 2.92e-18 86.3
MsG0580028560.01.T01 AT4G31800 38.776 98 55 4 228 321 165 261 2.69e-14 74.3
MsG0580028560.01.T01 AT5G28650 50.649 77 37 1 395 470 243 319 1.33e-17 84.7
MsG0580028560.01.T01 AT5G28650 54.237 59 25 2 238 294 263 321 7.05e-13 70.5
MsG0580028560.01.T01 AT5G43290 43.434 99 38 2 390 470 72 170 1.50e-17 83.6
MsG0580028560.01.T01 AT5G43290 63.793 58 20 1 236 292 113 170 5.24e-16 79.0
MsG0580028560.01.T01 AT2G25000 50.000 64 31 1 413 475 102 165 1.69e-17 82.4
MsG0580028560.01.T01 AT2G25000 47.619 63 31 2 238 298 104 166 9.77e-13 68.6
MsG0580028560.01.T01 AT2G25000 50.000 64 31 1 413 475 102 165 1.69e-17 82.4
MsG0580028560.01.T01 AT2G25000 47.619 63 31 2 238 298 104 166 9.77e-13 68.6
MsG0580028560.01.T01 AT2G25000 50.000 64 31 1 413 475 124 187 3.44e-17 82.0
MsG0580028560.01.T01 AT2G25000 47.619 63 31 2 238 298 126 188 1.29e-12 68.6
MsG0580028560.01.T01 AT3G04670 50.649 77 37 1 395 470 243 319 3.88e-17 83.2
MsG0580028560.01.T01 AT3G04670 52.542 59 26 2 238 294 263 321 9.52e-13 70.1
MsG0580028560.01.T01 AT2G25000 50.000 64 31 1 413 475 145 208 4.98e-17 82.0
MsG0580028560.01.T01 AT2G25000 47.619 63 31 2 238 298 147 209 1.75e-12 68.6
MsG0580028560.01.T01 AT2G30590 51.948 77 36 1 395 470 294 370 6.61e-17 83.2
MsG0580028560.01.T01 AT2G30590 54.237 59 25 2 238 294 314 372 4.08e-12 68.6
MsG0580028560.01.T01 AT1G69810 46.835 79 40 2 397 473 128 206 7.25e-17 82.4
MsG0580028560.01.T01 AT1G69810 46.835 79 40 2 397 473 186 264 9.37e-17 82.8
MsG0580028560.01.T01 AT4G23550 44.156 77 42 1 403 478 129 205 4.67e-15 76.6
MsG0580028560.01.T01 AT5G52830 40.404 99 56 3 395 491 147 244 1.17e-13 73.2
MsG0580028560.01.T01 AT5G52830 44.048 84 43 3 236 317 164 245 2.79e-12 68.9
MsG0580028560.01.T01 AT1G29280 50.000 60 29 1 415 473 75 134 1.23e-13 71.6
MsG0580028560.01.T01 AT4G01250 50.769 65 31 1 415 478 129 193 1.42e-13 72.0
MsG0580028560.01.T01 AT5G24110 38.182 110 51 3 228 333 104 200 3.57e-13 70.9
MsG0580028560.01.T01 AT3G58710 48.387 62 31 1 415 475 72 133 1.39e-12 68.9
MsG0580028560.01.T01 AT2G40740 36.283 113 52 4 361 469 135 231 1.40e-12 68.9
MsG0580028560.01.T01 AT2G40740 33.884 121 66 6 237 352 173 284 6.55e-12 67.0
MsG0580028560.01.T01 AT3G58710 48.387 62 31 1 415 475 71 132 1.52e-12 68.6
MsG0580028560.01.T01 AT2G40740 36.607 112 51 4 361 468 144 239 1.61e-12 68.9
MsG0580028560.01.T01 AT2G40740 33.884 121 66 6 237 352 182 293 8.30e-12 67.0
MsG0580028560.01.T01 AT2G34830 37.624 101 54 2 377 476 195 287 3.13e-12 69.3
MsG0580028560.01.T01 AT2G34830 37.624 101 54 2 377 476 186 278 3.22e-12 69.3
MsG0580028560.01.T01 AT1G30650 37.624 101 54 2 377 476 188 280 4.48e-12 68.9
MsG0580028560.01.T01 AT4G23810 45.588 68 33 2 228 291 149 216 5.26e-11 64.7
MsG0580028560.01.T01 AT4G11070 45.588 68 31 3 228 290 100 166 5.77e-11 63.9
MsG0580028560.01.T01 AT2G46400 42.308 78 38 3 237 307 104 181 6.74e-11 63.9
MsG0580028560.01.T01 AT5G45050 46.154 65 34 1 415 478 1181 1245 7.25e-11 65.9
MsG0580028560.01.T01 AT4G11070 45.588 68 31 3 228 290 132 198 7.39e-11 64.3
MsG0580028560.01.T01 AT5G45050 46.154 65 34 1 415 478 1042 1106 7.50e-11 65.9
MsG0580028560.01.T01 AT5G45050 46.154 65 34 1 415 478 1153 1217 7.67e-11 65.9

Find 142 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGGAAGGTTGGAAATTT+TGG 0.123460 5:-82344473 MsG0580028560.01.T01:three_prime_UTR
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5:+82346445 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5:-82346264 MsG0580028560.01.T01:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5:+82344537 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.295221 5:-82346389 MsG0580028560.01.T01:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5:+82344756 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.301577 5:-82344585 MsG0580028560.01.T01:CDS
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5:+82346412 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5:-82344884 MsG0580028560.01.T01:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5:+82346438 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5:+82346311 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5:-82344666 MsG0580028560.01.T01:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5:+82346167 None:intergenic
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5:+82345644 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5:+82347877 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5:+82344676 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5:+82347126 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5:-82345572 MsG0580028560.01.T01:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5:-82347205 MsG0580028560.01.T01:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5:+82344737 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5:+82346158 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5:+82347127 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5:+82344912 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5:+82347811 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5:+82346338 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5:+82344774 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5:+82346481 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5:+82344765 None:intergenic
GAGAATTCTTCAATATCAAT+TGG 0.394609 5:-82346086 MsG0580028560.01.T01:CDS
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5:-82345555 MsG0580028560.01.T01:CDS
CAGCAGAAGGAGAAGCTAAA+AGG 0.400048 5:+82347983 None:intergenic
TTCAGCAAAGCAAAGATTCA+AGG 0.408387 5:+82344520 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5:-82347862 MsG0580028560.01.T01:CDS
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5:+82346302 None:intergenic
TTGAGAATCCATAATTTCCT+TGG 0.432499 5:+82344658 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5:-82344862 MsG0580028560.01.T01:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5:+82346405 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5:-82346372 MsG0580028560.01.T01:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5:+82347224 None:intergenic
TATACAGGATGGCTTTGGTT+TGG 0.445170 5:-82344351 MsG0580028560.01.T01:three_prime_UTR
TTAGTAGATACATGGAAGGT+TGG 0.446487 5:-82344482 MsG0580028560.01.T01:three_prime_UTR
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5:+82347904 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5:+82347901 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5:-82344822 MsG0580028560.01.T01:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5:+82347832 None:intergenic
CTCAAGGTTTGATAATCAAA+TGG 0.448868 5:-82344640 MsG0580028560.01.T01:CDS
TGCTGTTGTTGATTCATGTA+AGG 0.449558 5:+82344615 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5:-82347954 MsG0580028560.01.T01:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5:-82346371 MsG0580028560.01.T01:CDS
AAGTTTATACAGGATGGCTT+TGG 0.463264 5:-82344356 MsG0580028560.01.T01:three_prime_UTR
GTTACTGAGATAGTTTATAA+GGG 0.464337 5:-82346263 MsG0580028560.01.T01:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5:+82344819 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5:-82344682 MsG0580028560.01.T01:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5:-82344883 MsG0580028560.01.T01:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5:-82346291 MsG0580028560.01.T01:CDS
CACCACCAGATCGACTCCTT+TGG 0.467879 5:+82346033 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5:+82347868 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5:+82344780 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.475349 5:+82346089 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5:+82346312 None:intergenic
GAGAAAGTTGTTGACATGAA+AGG 0.476955 5:+82348009 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5:+82344796 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5:-82345554 MsG0580028560.01.T01:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5:-82345600 MsG0580028560.01.T01:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5:+82344903 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5:+82346422 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5:-82347083 MsG0580028560.01.T01:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5:-82344752 MsG0580028560.01.T01:CDS
CTTGTAAAGTTTATACAGGA+TGG 0.489011 5:-82344362 MsG0580028560.01.T01:three_prime_UTR
GCAGCAGCAACAACAACAAA+TGG 0.490866 5:-82344595 MsG0580028560.01.T01:CDS
AGAAAGTTGTTGACATGAAA+GGG 0.492570 5:+82348010 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.492867 5:-82346400 MsG0580028560.01.T01:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5:+82346503 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.516687 5:+82344557 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5:+82344766 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5:+82344684 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5:-82346134 MsG0580028560.01.T01:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5:-82344675 MsG0580028560.01.T01:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5:+82344829 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5:-82346029 MsG0580028560.01.T01:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5:-82346126 MsG0580028560.01.T01:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5:+82344913 None:intergenic
GTTGTCTGAACTACAACTCT+AGG 0.534551 5:+82345620 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5:+82346431 None:intergenic
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5:-82346038 MsG0580028560.01.T01:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5:+82345582 None:intergenic
AAGGAAATTATGGATTCTCA+AGG 0.541036 5:-82344656 MsG0580028560.01.T01:CDS
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5:-82346290 MsG0580028560.01.T01:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5:-82347168 MsG0580028560.01.T01:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5:+82346472 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5:+82347113 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5:-82344828 MsG0580028560.01.T01:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5:+82346144 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5:+82347844 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5:+82346221 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5:+82347905 None:intergenic
TGTCCTTGAGGTGCTTGCTG+TGG 0.563779 5:+82344711 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5:-82346485 MsG0580028560.01.T01:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5:+82347094 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5:-82347188 MsG0580028560.01.T01:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5:-82347189 MsG0580028560.01.T01:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5:+82347230 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5:+82347906 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5:-82345583 MsG0580028560.01.T01:CDS
TGGTTTCTCCTCTAGAGCTA+AGG 0.577015 5:-82344565 MsG0580028560.01.T01:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5:-82346410 MsG0580028560.01.T01:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5:+82344818 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5:-82347953 MsG0580028560.01.T01:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5:+82347878 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5:-82346049 MsG0580028560.01.T01:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5:-82346195 MsG0580028560.01.T01:CDS
AATTCTTCAATATCAATTGG+AGG 0.586744 5:-82346083 MsG0580028560.01.T01:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5:-82346619 MsG0580028560.01.T01:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5:-82344760 MsG0580028560.01.T01:CDS
TGTGGCCTCTGACTCTGAAG+AGG 0.590935 5:+82344729 None:intergenic
GACATTGATATCCTGGATGA+TGG 0.594877 5:-82345593 MsG0580028560.01.T01:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5:+82347880 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5:-82345989 MsG0580028560.01.T01:intron
GCATAACAGGAGAATCAAGA+AGG 0.606162 5:+82347824 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5:-82344768 MsG0580028560.01.T01:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5:-82345538 MsG0580028560.01.T01:intron
TGGATGATGGTTACAGATGG+AGG 0.611243 5:-82345580 MsG0580028560.01.T01:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5:-82344861 MsG0580028560.01.T01:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5:+82347833 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5:-82346035 MsG0580028560.01.T01:CDS
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5:-82344734 MsG0580028560.01.T01:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5:+82344699 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5:+82347970 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5:-82346009 MsG0580028560.01.T01:CDS
AGGCCACAGCAAGCACCTCA+AGG 0.632749 5:-82344714 MsG0580028560.01.T01:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5:-82346229 MsG0580028560.01.T01:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5:-82347952 MsG0580028560.01.T01:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5:+82347879 None:intergenic
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5:-82346000 MsG0580028560.01.T01:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5:+82344878 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5:+82347907 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5:-82344681 MsG0580028560.01.T01:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5:-82346140 MsG0580028560.01.T01:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5:-82347187 MsG0580028560.01.T01:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5:+82347847 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5:+82344820 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5:-82344917 MsG0580028560.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTAATCAATTGA+AGG - Chr5:82345021-82345040 MsG0580028560.01.T01:intron 10.0%
!! AAAACATTGAATCATATTTA+TGG + Chr5:82346470-82346489 None:intergenic 15.0%
!!! CTTTAGTTTTTTTTTTTTGT+TGG - Chr5:82345059-82345078 MsG0580028560.01.T01:intron 15.0%
!!! TAAGTTTACATAAAATTTTC+AGG - Chr5:82346699-82346718 MsG0580028560.01.T01:intron 15.0%
!!! TTATTTGTTTTTTTTGACAT+GGG - Chr5:82344707-82344726 MsG0580028560.01.T01:CDS 15.0%
!!! TTTATTTGTTTTTTTTGACA+TGG - Chr5:82344706-82344725 MsG0580028560.01.T01:CDS 15.0%
!!! TTTTATTTTATTTCAACACT+TGG - Chr5:82346442-82346461 MsG0580028560.01.T01:CDS 15.0%
!! AAAATGAAAGAAACTAACAT+TGG + Chr5:82344613-82344632 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG - Chr5:82344449-82344468 MsG0580028560.01.T01:three_prime_UTR 20.0%
!! ATATTATTATATTGTGGTTG+TGG - Chr5:82346605-82346624 MsG0580028560.01.T01:CDS 20.0%
!! CAAAAAACAAATGCAATAAA+TGG + Chr5:82348005-82348024 None:intergenic 20.0%
!! CTTGATATATTCATTTATGT+AGG - Chr5:82346657-82346676 MsG0580028560.01.T01:intron 20.0%
!! GAGATTAAAAAAATTGAAGT+TGG - Chr5:82345461-82345480 MsG0580028560.01.T01:intron 20.0%
!! GCAATAAATGCTTATAAAAT+TGG + Chr5:82345366-82345385 None:intergenic 20.0%
!! GCTCATATATTATTATATTG+TGG - Chr5:82346599-82346618 MsG0580028560.01.T01:CDS 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG - Chr5:82346710-82346729 MsG0580028560.01.T01:intron 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG + Chr5:82346884-82346903 None:intergenic 20.0%
!!! CATTTATTGCATTTGTTTTT+TGG - Chr5:82348003-82348022 MsG0580028560.01.T01:CDS 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG + Chr5:82346878-82346897 None:intergenic 20.0%
!!! TTTATGTAGGTTTTATTTCA+TGG - Chr5:82346670-82346689 MsG0580028560.01.T01:intron 20.0%
!!! TTTCATTTTTAGTAGATACA+TGG - Chr5:82347912-82347931 MsG0580028560.01.T01:CDS 20.0%
!!! TTTTCTTGTAAAGTTTATAC+AGG - Chr5:82348036-82348055 MsG0580028560.01.T01:CDS 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - Chr5:82344973-82344992 MsG0580028560.01.T01:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG - Chr5:82346722-82346741 MsG0580028560.01.T01:intron 25.0%
! AAATATTACCTAGTCAAATG+TGG - Chr5:82347013-82347032 MsG0580028560.01.T01:intron 25.0%
! AATGCTGTTACTGAATTTAT+GGG - Chr5:82345107-82345126 MsG0580028560.01.T01:intron 25.0%
! AATTCTTCAATATCAATTGG+AGG - Chr5:82346319-82346338 MsG0580028560.01.T01:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG + Chr5:82345719-82345738 None:intergenic 25.0%
! AGAAATAGCCAAATTAGAAA+AGG + Chr5:82347161-82347180 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG - Chr5:82346138-82346157 MsG0580028560.01.T01:CDS 25.0%
! ATAAGCATTTATTGCATGTT+TGG - Chr5:82345371-82345390 MsG0580028560.01.T01:intron 25.0%
! ATATTTGTAAACTGCAATCA+TGG + Chr5:82346999-82347018 None:intergenic 25.0%
! ATTGATATTGAAGAATTCTC+AGG + Chr5:82346316-82346335 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - Chr5:82344448-82344467 MsG0580028560.01.T01:three_prime_UTR 25.0%
! GAGAATTCTTCAATATCAAT+TGG - Chr5:82346316-82346335 MsG0580028560.01.T01:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG - Chr5:82344450-82344469 MsG0580028560.01.T01:three_prime_UTR 25.0%
! GTTACTGAGATAGTTTATAA+GGG - Chr5:82346139-82346158 MsG0580028560.01.T01:CDS 25.0%
! TAATGCTGTTACTGAATTTA+TGG - Chr5:82345106-82345125 MsG0580028560.01.T01:intron 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + Chr5:82344939-82344958 None:intergenic 25.0%
! TATTTGTAAACTGCAATCAT+GGG + Chr5:82346998-82347017 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - Chr5:82346542-82346561 MsG0580028560.01.T01:CDS 25.0%
! TTTCATCATCTATGTTTCAT+GGG - Chr5:82344741-82344760 MsG0580028560.01.T01:CDS 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG - Chr5:82345715-82345734 MsG0580028560.01.T01:intron 25.0%
!! ACTGCAATTTAAAACTACTA+TGG - Chr5:82346628-82346647 MsG0580028560.01.T01:intron 25.0%
!! ATTTCATTGATTGGATTAAC+AGG + Chr5:82346238-82346257 None:intergenic 25.0%
!! ATTTGTTCTCTATCTGTTTT+AGG - Chr5:82347065-82347084 MsG0580028560.01.T01:intron 25.0%
!! GTGTTTAATTTATGACTTGT+AGG - Chr5:82347446-82347465 MsG0580028560.01.T01:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG + Chr5:82346543-82346562 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG - Chr5:82346961-82346980 MsG0580028560.01.T01:intron 25.0%
!! TTTTCATCATCTATGTTTCA+TGG - Chr5:82344740-82344759 MsG0580028560.01.T01:CDS 25.0%
!!! AAGATTGTTTGTTTTGTGTT+TGG - Chr5:82344848-82344867 MsG0580028560.01.T01:CDS 25.0%
!!! ATTTTTAGTAGATACATGGA+AGG - Chr5:82347916-82347935 MsG0580028560.01.T01:CDS 25.0%
!!! CACATTATTTTTGTTGGATT+TGG + Chr5:82345682-82345701 None:intergenic 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - Chr5:82347096-82347115 MsG0580028560.01.T01:CDS 25.0%
!!! CTTTTATTTTCCAATACACA+AGG - Chr5:82348088-82348107 MsG0580028560.01.T01:CDS 25.0%
!!! GTTGATCACATTATTTTTGT+TGG + Chr5:82345688-82345707 None:intergenic 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - Chr5:82344780-82344799 MsG0580028560.01.T01:CDS 25.0%
!!! TTTCTAATTTGGCTATTTCT+TGG - Chr5:82347161-82347180 MsG0580028560.01.T01:CDS 25.0%
AAAGTTGAGAGATCAATTGA+GGG - Chr5:82346112-82346131 MsG0580028560.01.T01:CDS 30.0%
AAGGAAATTATGGATTCTCA+AGG - Chr5:82347746-82347765 MsG0580028560.01.T01:intron 30.0%
AATTGGATGAACAATTCTGA+GGG - Chr5:82345214-82345233 MsG0580028560.01.T01:intron 30.0%
AGAAAGTTGTTGACATGAAA+GGG + Chr5:82344395-82344414 None:intergenic 30.0%
ATATGGACAAAAGCAAGTTA+AGG - Chr5:82346030-82346049 MsG0580028560.01.T01:CDS 30.0%
ATATGGACAGAAAGTTGTTA+AGG - Chr5:82346847-82346866 MsG0580028560.01.T01:intron 30.0%
ATGTTCTTAAATTGCTGATG+CGG - Chr5:82346494-82346513 MsG0580028560.01.T01:CDS 30.0%
CTTGTAAAGTTTATACAGGA+TGG - Chr5:82348040-82348059 MsG0580028560.01.T01:CDS 30.0%
GAAAAATGAAGGTGAAAATG+AGG - Chr5:82346721-82346740 MsG0580028560.01.T01:intron 30.0%
GCTAAGAAAAGTTTGAACAA+AGG - Chr5:82344894-82344913 MsG0580028560.01.T01:CDS 30.0%
TATGGACAAAAGCAAGTTAA+GGG - Chr5:82346031-82346050 MsG0580028560.01.T01:CDS 30.0%
TATGGACAGAAAGTTGTTAA+GGG - Chr5:82346848-82346867 MsG0580028560.01.T01:intron 30.0%
TGATCATGGATTTCATTGAT+TGG + Chr5:82346247-82346266 None:intergenic 30.0%
TGATGATTGAAAAGTTGTTG+TGG + Chr5:82345311-82345330 None:intergenic 30.0%
TGTAGTCAGTACATTATTGA+CGG - Chr5:82345515-82345534 MsG0580028560.01.T01:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + Chr5:82347148-82347167 None:intergenic 30.0%
TTCAAAACATCGATGATCAT+TGG + Chr5:82345641-82345660 None:intergenic 30.0%
TTGAGAATCCATAATTTCCT+TGG + Chr5:82347747-82347766 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - Chr5:82345316-82345335 MsG0580028560.01.T01:intron 30.0%
! ACTTTTTACCACATTTGACT+AGG + Chr5:82347024-82347043 None:intergenic 30.0%
! CTCAAGGTTTGATAATCAAA+TGG - Chr5:82347762-82347781 MsG0580028560.01.T01:intron 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - Chr5:82347150-82347169 MsG0580028560.01.T01:CDS 30.0%
!!! GCATTTGTTTTTTGGATGTT+TGG - Chr5:82348011-82348030 MsG0580028560.01.T01:CDS 30.0%
AAATCCAAACAATGGAGCAA+TGG - Chr5:82347642-82347661 MsG0580028560.01.T01:intron 35.0%
AACAAGTGACATTGATATCC+TGG - Chr5:82346802-82346821 MsG0580028560.01.T01:intron 35.0%
AACCCTTCAAATCCAAACAA+TGG - Chr5:82347634-82347653 MsG0580028560.01.T01:intron 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + Chr5:82344528-82344547 None:intergenic 35.0%
AAGTTTATACAGGATGGCTT+TGG - Chr5:82348046-82348065 MsG0580028560.01.T01:CDS 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + Chr5:82344527-82344546 None:intergenic 35.0%
ATAAAACACCGACACAGAAA+CGG + Chr5:82347399-82347418 None:intergenic 35.0%
ATTGGATGAACAATTCTGAG+GGG - Chr5:82345215-82345234 MsG0580028560.01.T01:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - Chr5:82347817-82347836 MsG0580028560.01.T01:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG - Chr5:82345213-82345232 MsG0580028560.01.T01:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + Chr5:82347639-82347658 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + Chr5:82346103-82346122 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG - Chr5:82346111-82346130 MsG0580028560.01.T01:CDS 35.0%
GAGAAAGTTGTTGACATGAA+AGG + Chr5:82344396-82344415 None:intergenic 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + Chr5:82344537-82344556 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG - Chr5:82346013-82346032 MsG0580028560.01.T01:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG + Chr5:82345933-82345952 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG + Chr5:82346067-82346086 None:intergenic 35.0%
TAGCCAAATTAGAAAAGGCA+AGG + Chr5:82347156-82347175 None:intergenic 35.0%
TCAAGGAACATGTCATCTTT+AGG + Chr5:82347868-82347887 None:intergenic 35.0%
TCATATGCATCACATGGTAA+TGG - Chr5:82346268-82346287 MsG0580028560.01.T01:CDS 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + Chr5:82346093-82346112 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG + Chr5:82346000-82346019 None:intergenic 35.0%
TTAAGGGAAATCCAAATCCA+AGG - Chr5:82346864-82346883 MsG0580028560.01.T01:intron 35.0%
TTAGTAGATACATGGAAGGT+TGG - Chr5:82347920-82347939 MsG0580028560.01.T01:CDS 35.0%
TTCAGCAAAGCAAAGATTCA+AGG + Chr5:82347885-82347904 None:intergenic 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + Chr5:82346094-82346113 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + Chr5:82344594-82344613 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG - Chr5:82345319-82345338 MsG0580028560.01.T01:intron 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + Chr5:82347631-82347650 None:intergenic 35.0%
! ACATGGAAGGTTGGAAATTT+TGG - Chr5:82347929-82347948 MsG0580028560.01.T01:CDS 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + Chr5:82346421-82346440 None:intergenic 35.0%
! CTTTTCAAACCCAACAACAA+GGG - Chr5:82345266-82345285 MsG0580028560.01.T01:intron 35.0%
! TCTTTTCAAACCCAACAACA+AGG - Chr5:82345265-82345284 MsG0580028560.01.T01:intron 35.0%
! TGGTGATGAATTTGATGAAG+AGG - Chr5:82346393-82346412 MsG0580028560.01.T01:CDS 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG + Chr5:82345924-82345943 None:intergenic 35.0%
!! AAATTTTGGAAAGTGGGTCT+AGG - Chr5:82347943-82347962 MsG0580028560.01.T01:CDS 35.0%
!! AGGTTGGAAATTTTGGAAAG+TGG - Chr5:82347936-82347955 MsG0580028560.01.T01:CDS 35.0%
!! ATCACATGGTAATGGACAAA+TGG - Chr5:82346276-82346295 MsG0580028560.01.T01:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG - Chr5:82346002-82346021 MsG0580028560.01.T01:CDS 35.0%
!! GGCTATTTCTTGGTCAAATT+TGG - Chr5:82347171-82347190 MsG0580028560.01.T01:CDS 35.0%
!! GGTTGGAAATTTTGGAAAGT+GGG - Chr5:82347937-82347956 MsG0580028560.01.T01:CDS 35.0%
!! TGCTGTTGTTGATTCATGTA+AGG + Chr5:82347790-82347809 None:intergenic 35.0%
AACGTGCCTCACATGATTTA+AGG - Chr5:82347518-82347537 MsG0580028560.01.T01:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + Chr5:82347142-82347161 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+CGG - Chr5:82346551-82346570 MsG0580028560.01.T01:CDS 40.0%
ACACAGAAACGGACATAACA+TGG + Chr5:82347388-82347407 None:intergenic 40.0%
ACGTGCCTCACATGATTTAA+GGG - Chr5:82347519-82347538 MsG0580028560.01.T01:intron 40.0%
ATCATCTGATCTTCGGCTTA+AGG + Chr5:82345993-82346012 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - Chr5:82346207-82346226 MsG0580028560.01.T01:CDS 40.0%
ATTCAACCTTCAAATGCTGC+AGG - Chr5:82347720-82347739 MsG0580028560.01.T01:intron 40.0%
ATTTGATGAAGAGGAACCTG+AGG - Chr5:82346402-82346421 MsG0580028560.01.T01:CDS 40.0%
CAAACCAACAACACCAACAA+TGG - Chr5:82345917-82345936 MsG0580028560.01.T01:intron 40.0%
CATATCTGTCAGTGTCATGT+CGG + Chr5:82347294-82347313 None:intergenic 40.0%
CTGCTCAAAGCAACTACAAT+TGG - Chr5:82345197-82345216 MsG0580028560.01.T01:intron 40.0%
GACATTGATATCCTGGATGA+TGG - Chr5:82346809-82346828 MsG0580028560.01.T01:intron 40.0%
GACTGTCCAATCTAGACTAA+TGG + Chr5:82345542-82345561 None:intergenic 40.0%
GATCAGTCATATGCATCACA+TGG - Chr5:82346262-82346281 MsG0580028560.01.T01:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG + Chr5:82344581-82344600 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + Chr5:82347640-82347659 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG - Chr5:82347541-82347560 MsG0580028560.01.T01:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - Chr5:82346830-82346849 MsG0580028560.01.T01:intron 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + Chr5:82344526-82344545 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG + Chr5:82346261-82346280 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG + Chr5:82346785-82346804 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG + Chr5:82345902-82345921 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + Chr5:82344525-82344544 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG - Chr5:82345783-82345802 MsG0580028560.01.T01:intron 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + Chr5:82347721-82347740 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG - Chr5:82347388-82347407 MsG0580028560.01.T01:intron 40.0%
TTAAGCCGAAGATCAGATGA+TGG - Chr5:82345992-82346011 MsG0580028560.01.T01:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG - Chr5:82347721-82347740 MsG0580028560.01.T01:intron 40.0%
TTGAATGGTGATTGTCCTTG+AGG + Chr5:82347706-82347725 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + Chr5:82347625-82347644 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG - Chr5:82345166-82345185 MsG0580028560.01.T01:intron 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG + Chr5:82344480-82344499 None:intergenic 40.0%
!! TATACAGGATGGCTTTGGTT+TGG - Chr5:82348051-82348070 MsG0580028560.01.T01:CDS 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - Chr5:82344540-82344559 MsG0580028560.01.T01:CDS 40.0%
AAACTGCAATCATGGGAGTG+AGG + Chr5:82346991-82347010 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - Chr5:82347650-82347669 MsG0580028560.01.T01:intron 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - Chr5:82346413-82346432 MsG0580028560.01.T01:CDS 45.0%
ATGCTAAGCCTCAATGCACA+AGG - Chr5:82346173-82346192 MsG0580028560.01.T01:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG + Chr5:82347649-82347668 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + Chr5:82347527-82347546 None:intergenic 45.0%
CAGCAGAAGGAGAAGCTAAA+AGG + Chr5:82344422-82344441 None:intergenic 45.0%
CGACATCACAACTGCAATTG+CGG + Chr5:82346577-82346596 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG - Chr5:82347292-82347311 MsG0580028560.01.T01:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG + Chr5:82345983-82346002 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + Chr5:82344572-82344591 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG + Chr5:82346184-82346203 None:intergenic 45.0%
GCAGCAGCAACAACAACAAA+TGG - Chr5:82347807-82347826 MsG0580028560.01.T01:intron 45.0%
GGAGTGAGGAAATCCATCAT+TGG + Chr5:82346977-82346996 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - Chr5:82347540-82347559 MsG0580028560.01.T01:intron 45.0%
GGGGAATCAGCAAATGAGAA+AGG - Chr5:82345234-82345253 MsG0580028560.01.T01:intron 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + Chr5:82344500-82344519 None:intergenic 45.0%
TCATCTGAAGAAGCAGCAGA+AGG + Chr5:82344435-82344454 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG + Chr5:82346823-82346842 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG + Chr5:82346761-82346780 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + Chr5:82344499-82344518 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - Chr5:82346353-82346372 MsG0580028560.01.T01:CDS 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG + Chr5:82345175-82345194 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - Chr5:82345533-82345552 MsG0580028560.01.T01:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + Chr5:82347609-82347628 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - Chr5:82346819-82346838 MsG0580028560.01.T01:intron 45.0%
! TGGATGATGGTTACAGATGG+AGG - Chr5:82346822-82346841 MsG0580028560.01.T01:intron 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG + Chr5:82345974-82345993 None:intergenic 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + Chr5:82347848-82347867 None:intergenic 45.0%
!! TGGTTTCTCCTCTAGAGCTA+AGG - Chr5:82347837-82347856 MsG0580028560.01.T01:CDS 45.0%
CTGCAGGGCCAAGGAAATTA+TGG - Chr5:82347736-82347755 MsG0580028560.01.T01:intron 50.0%
GACAAAGGCAAAGAAGGAGG+GGG + Chr5:82344498-82344517 None:intergenic 50.0%
GCTTCCTCACTGGACAGTTA+GGG + Chr5:82347492-82347511 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + Chr5:82344573-82344592 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + Chr5:82344504-82344523 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + Chr5:82344501-82344520 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - Chr5:82347668-82347687 MsG0580028560.01.T01:intron 50.0%
TCTCACCAAAGGAGTCGATC+TGG - Chr5:82346364-82346383 MsG0580028560.01.T01:CDS 50.0%
TGCTTCCTCACTGGACAGTT+AGG + Chr5:82347493-82347512 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG + Chr5:82345960-82345979 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + Chr5:82347668-82347687 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG + Chr5:82345181-82345200 None:intergenic 50.0%
AGGTCAGCAGGGCTTAAACC+AGG + Chr5:82344561-82344580 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG - Chr5:82347485-82347504 MsG0580028560.01.T01:intron 55.0%
CACCAAAGGAGTCGATCTGG+TGG - Chr5:82346367-82346386 MsG0580028560.01.T01:CDS 55.0%
CGTTCGACATGCTTCCTCAC+TGG + Chr5:82347502-82347521 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - Chr5:82347727-82347746 MsG0580028560.01.T01:intron 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + Chr5:82347729-82347748 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG + Chr5:82344513-82344532 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + Chr5:82344522-82344541 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + Chr5:82345292-82345311 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + Chr5:82344558-82344577 None:intergenic 55.0%
! CACCACCAGATCGACTCCTT+TGG + Chr5:82346372-82346391 None:intergenic 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG + Chr5:82345967-82345986 None:intergenic 55.0%
! TGTCCTTGAGGTGCTTGCTG+TGG + Chr5:82347694-82347713 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + Chr5:82347676-82347695 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG + Chr5:82345278-82345297 None:intergenic 55.0%
AGGCCACAGCAAGCACCTCA+AGG - Chr5:82347688-82347707 MsG0580028560.01.T01:intron 60.0%
CTTCCACTTCCACGAGCAGC+GGG + Chr5:82347586-82347605 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + Chr5:82347587-82347606 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG + Chr5:82347585-82347604 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG - Chr5:82346373-82346392 MsG0580028560.01.T01:CDS 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG + Chr5:82345279-82345298 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + Chr5:82347576-82347595 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - Chr5:82347574-82347593 MsG0580028560.01.T01:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - Chr5:82347580-82347599 MsG0580028560.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 82344306 82348118 82344306 ID=MsG0580028560.01;Name=MsG0580028560.01
Chr5 mRNA 82344306 82348118 82344306 ID=MsG0580028560.01.T01;Parent=MsG0580028560.01;Name=MsG0580028560.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.5|0.4|1|1|1|5|215|578
Chr5 exon 82344306 82344956 82344306 ID=MsG0580028560.01.T01:exon:33117;Parent=MsG0580028560.01.T01
Chr5 exon 82345539 82345703 82345539 ID=MsG0580028560.01.T01:exon:33116;Parent=MsG0580028560.01.T01
Chr5 exon 82345990 82346630 82345990 ID=MsG0580028560.01.T01:exon:33115;Parent=MsG0580028560.01.T01
Chr5 exon 82347073 82347258 82347073 ID=MsG0580028560.01.T01:exon:33114;Parent=MsG0580028560.01.T01
Chr5 exon 82347810 82348118 82347810 ID=MsG0580028560.01.T01:exon:33113;Parent=MsG0580028560.01.T01
Chr5 CDS 82347810 82348118 82347810 ID=MsG0580028560.01.T01:cds;Parent=MsG0580028560.01.T01
Chr5 CDS 82347073 82347258 82347073 ID=MsG0580028560.01.T01:cds;Parent=MsG0580028560.01.T01
Chr5 CDS 82345990 82346630 82345990 ID=MsG0580028560.01.T01:cds;Parent=MsG0580028560.01.T01
Chr5 CDS 82345539 82345703 82345539 ID=MsG0580028560.01.T01:cds;Parent=MsG0580028560.01.T01
Chr5 CDS 82344521 82344956 82344521 ID=MsG0580028560.01.T01:cds;Parent=MsG0580028560.01.T01
Chr5 three_prime_UTR 82344306 82344520 82344306 ID=MsG0580028560.01.T01:three_prime_utr;Parent=MsG0580028560.01.T01
Gene Sequence

>MsG0580028560.01.T01

ATGGCATCTTCATCAACAACTAGTTTTGAAAATAATAATAATCAAAACTCTTTGAACTCATTGAACAATTTCACTTTCTCAACACACCCTTTCATGTCAACAACTTTCTCTGACCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAACAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAGCATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAGCAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAGGTTTGATAATCAAATGGTGCCTTACATGAATCAACAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTCTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA

Protein sequence

>MsG0580028560.01.T01

MASSSTTSFENNNNQNSLNSLNNFTFSTHPFMSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC*