Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046996.01.T01 | XP_003609582.1 | 93.583 | 187 | 8 | 2 | 1 | 183 | 1 | 187 | 5.27E-104 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046996.01.T01 | C6SVQ5 | 71.795 | 195 | 41 | 4 | 1 | 183 | 1 | 193 | 8.59E-93 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046996.01.T01 | G7JJ29 | 93.583 | 187 | 8 | 2 | 1 | 183 | 1 | 187 | 2.52e-104 | 306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0880046996.01 | 0.830302 | 3.170350e-55 | 3.326955e-52 |
| MsG0080048036.01 | MsG0880046996.01 | 0.878273 | 3.208578e-69 | 1.664947e-65 |
| MsG0080048301.01 | MsG0880046996.01 | 0.829555 | 4.821491e-55 | 4.951242e-52 |
| MsG0080048312.01 | MsG0880046996.01 | 0.807702 | 4.441962e-50 | 2.491110e-47 |
| MsG0080048345.01 | MsG0880046996.01 | 0.854427 | 1.239890e-61 | 2.767909e-58 |
| MsG0080048347.01 | MsG0880046996.01 | 0.862510 | 4.814557e-64 | 1.413645e-60 |
| MsG0080048348.01 | MsG0880046996.01 | 0.812480 | 4.150932e-51 | 2.642290e-48 |
| MsG0080048349.01 | MsG0880046996.01 | 0.824644 | 7.219076e-54 | 6.433140e-51 |
| MsG0080048350.01 | MsG0880046996.01 | 0.809295 | 2.030215e-50 | 1.187491e-47 |
| MsG0080048352.01 | MsG0880046996.01 | 0.866107 | 3.629381e-65 | 1.209054e-61 |
| MsG0080048967.01 | MsG0880046996.01 | 0.810187 | 1.305735e-50 | 7.818576e-48 |
| MsG0080049066.01 | MsG0880046996.01 | -0.840888 | 6.629393e-58 | 9.576233e-55 |
| MsG0080049133.01 | MsG0880046996.01 | -0.825293 | 5.072417e-54 | 4.604505e-51 |
| MsG0180000019.01 | MsG0880046996.01 | 0.801222 | 9.967120e-49 | 4.734104e-46 |
| MsG0180000234.01 | MsG0880046996.01 | 0.841126 | 5.740859e-58 | 8.353154e-55 |
| MsG0180000337.01 | MsG0880046996.01 | 0.846132 | 2.632421e-59 | 4.485811e-56 |
| MsG0180000467.01 | MsG0880046996.01 | -0.814537 | 1.464991e-51 | 9.856315e-49 |
| MsG0180000930.01 | MsG0880046996.01 | 0.833265 | 5.889220e-56 | 6.747030e-53 |
| MsG0180001050.01 | MsG0880046996.01 | 0.815393 | 9.461554e-52 | 6.515189e-49 |
| MsG0180001053.01 | MsG0880046996.01 | 0.807565 | 4.751239e-50 | 2.654983e-47 |
| MsG0180001108.01 | MsG0880046996.01 | 0.800431 | 1.445886e-48 | 6.731412e-46 |
| MsG0180001111.01 | MsG0880046996.01 | -0.838009 | 3.709674e-57 | 4.904558e-54 |
| MsG0180001533.01 | MsG0880046996.01 | 0.819430 | 1.166509e-52 | 8.974544e-50 |
| MsG0180002099.01 | MsG0880046996.01 | -0.827187 | 1.796441e-54 | 1.721728e-51 |
| MsG0180002214.01 | MsG0880046996.01 | -0.846138 | 2.621042e-59 | 4.467374e-56 |
| MsG0180002274.01 | MsG0880046996.01 | 0.819520 | 1.112225e-52 | 8.578755e-50 |
| MsG0180002326.01 | MsG0880046996.01 | 0.818856 | 1.575810e-52 | 1.193303e-49 |
| MsG0180002365.01 | MsG0880046996.01 | 0.836658 | 8.225434e-57 | 1.043327e-53 |
| MsG0180002425.01 | MsG0880046996.01 | -0.810098 | 1.364798e-50 | 8.153800e-48 |
| MsG0180002546.01 | MsG0880046996.01 | -0.827378 | 1.617519e-54 | 1.559044e-51 |
| MsG0880044339.01 | MsG0880046996.01 | -0.847232 | 1.317522e-59 | 2.326317e-56 |
| MsG0880044570.01 | MsG0880046996.01 | 0.813866 | 2.060746e-51 | 1.361443e-48 |
| MsG0880045188.01 | MsG0880046996.01 | -0.813196 | 2.892699e-51 | 1.876561e-48 |
| MsG0880045272.01 | MsG0880046996.01 | 0.840780 | 7.076363e-58 | 1.018747e-54 |
| MsG0880045277.01 | MsG0880046996.01 | 0.830961 | 2.186842e-55 | 2.339750e-52 |
| MsG0880045369.01 | MsG0880046996.01 | -0.809050 | 2.291648e-50 | 1.331616e-47 |
| MsG0880045385.01 | MsG0880046996.01 | -0.818016 | 2.442213e-52 | 1.806930e-49 |
| MsG0880045413.01 | MsG0880046996.01 | -0.806613 | 7.555754e-50 | 4.119263e-47 |
| MsG0880045441.01 | MsG0880046996.01 | 0.846861 | 1.664550e-59 | 2.904304e-56 |
| MsG0880045458.01 | MsG0880046996.01 | 0.874424 | 6.826111e-68 | 3.071501e-64 |
| MsG0880045677.01 | MsG0880046996.01 | 0.874298 | 7.534816e-68 | 3.373712e-64 |
| MsG0880045683.01 | MsG0880046996.01 | 0.806705 | 7.225449e-50 | 3.948553e-47 |
| MsG0880045818.01 | MsG0880046996.01 | 0.828981 | 6.644380e-55 | 6.708716e-52 |
| MsG0880045861.01 | MsG0880046996.01 | 0.804357 | 2.245598e-49 | 1.155441e-46 |
| MsG0880045968.01 | MsG0880046996.01 | -0.804346 | 2.257783e-49 | 1.161367e-46 |
| MsG0880046176.01 | MsG0880046996.01 | 0.814007 | 1.918499e-51 | 1.272322e-48 |
| MsG0880046219.01 | MsG0880046996.01 | -0.833019 | 6.782845e-56 | 7.714293e-53 |
| MsG0880046308.01 | MsG0880046996.01 | 0.855233 | 7.236976e-62 | 1.659257e-58 |
| MsG0880046341.01 | MsG0880046996.01 | -0.810017 | 1.420733e-50 | 8.470506e-48 |
| MsG0880046429.01 | MsG0880046996.01 | 0.880798 | 4.077854e-70 | 2.331217e-66 |
| MsG0880046469.01 | MsG0880046996.01 | -0.839716 | 1.341240e-57 | 1.868015e-54 |
| MsG0880046863.01 | MsG0880046996.01 | 0.848596 | 5.543083e-60 | 1.022400e-56 |
| MsG0880046996.01 | MsG0880047233.01 | 0.804632 | 1.968215e-49 | 1.019860e-46 |
| MsG0880046996.01 | MsG0880047256.01 | 0.885975 | 5.113486e-72 | 3.583580e-68 |
| MsG0880046996.01 | MsG0880047318.01 | -0.837263 | 5.762130e-57 | 7.444011e-54 |
| MsG0880046996.01 | MsG0880047486.01 | 0.866281 | 3.196706e-65 | 1.071528e-61 |
| MsG0880046996.01 | MsG0880047491.01 | 0.837537 | 4.902958e-57 | 6.388324e-54 |
| MsG0880046996.01 | MsG0880047493.01 | 0.826819 | 2.200559e-54 | 2.086329e-51 |
| MsG0880046996.01 | MsG0880047665.01 | 0.832469 | 9.289814e-56 | 1.039260e-52 |
| MsG0880046996.01 | MsG0880047747.01 | 0.823438 | 1.385105e-53 | 1.192571e-50 |
| MsG0180002935.01 | MsG0880046996.01 | 0.819654 | 1.036847e-52 | 8.027123e-50 |
| MsG0180002981.01 | MsG0880046996.01 | 0.806808 | 6.871092e-50 | 3.765137e-47 |
| MsG0180003235.01 | MsG0880046996.01 | 0.831316 | 1.788690e-55 | 1.934006e-52 |
| MsG0180003240.01 | MsG0880046996.01 | 0.833968 | 3.930676e-56 | 4.599723e-53 |
| MsG0180003250.01 | MsG0880046996.01 | 0.815206 | 1.041141e-51 | 7.132094e-49 |
| MsG0180003687.01 | MsG0880046996.01 | 0.808697 | 2.726358e-50 | 1.569366e-47 |
| MsG0180003757.01 | MsG0880046996.01 | -0.869329 | 3.360066e-66 | 1.256064e-62 |
| MsG0180003779.01 | MsG0880046996.01 | -0.816336 | 5.829353e-52 | 4.119272e-49 |
| MsG0180003985.01 | MsG0880046996.01 | -0.816482 | 5.405946e-52 | 3.835015e-49 |
| MsG0180004110.01 | MsG0880046996.01 | 0.821358 | 4.212706e-53 | 3.419578e-50 |
| MsG0180004203.01 | MsG0880046996.01 | 0.863116 | 3.131779e-64 | 9.388881e-61 |
| MsG0180004266.01 | MsG0880046996.01 | 0.812921 | 3.322936e-51 | 2.139768e-48 |
| MsG0180004328.01 | MsG0880046996.01 | 0.835510 | 1.609223e-56 | 1.972016e-53 |
| MsG0180004491.01 | MsG0880046996.01 | 0.850243 | 1.925994e-60 | 3.748961e-57 |
| MsG0180004502.01 | MsG0880046996.01 | -0.846656 | 1.893748e-59 | 3.282816e-56 |
| MsG0180004553.01 | MsG0880046996.01 | -0.811478 | 6.861606e-51 | 4.252012e-48 |
| MsG0180004562.01 | MsG0880046996.01 | 0.864339 | 1.305790e-64 | 4.085416e-61 |
| MsG0180004752.01 | MsG0880046996.01 | 0.829328 | 5.472719e-55 | 5.584054e-52 |
| MsG0180004777.01 | MsG0880046996.01 | 0.842778 | 2.100282e-58 | 3.218239e-55 |
| MsG0180004919.01 | MsG0880046996.01 | 0.818394 | 2.005794e-52 | 1.499675e-49 |
| MsG0180004941.01 | MsG0880046996.01 | 0.849845 | 2.489477e-60 | 4.782373e-57 |
| MsG0180004942.01 | MsG0880046996.01 | 0.851961 | 6.310685e-61 | 1.298503e-57 |
| MsG0180004957.01 | MsG0880046996.01 | -0.803505 | 3.376972e-49 | 1.699963e-46 |
| MsG0180005016.01 | MsG0880046996.01 | -0.807808 | 4.217866e-50 | 2.371997e-47 |
| MsG0180005328.01 | MsG0880046996.01 | 0.872313 | 3.501192e-67 | 1.458210e-63 |
| MsG0180005356.01 | MsG0880046996.01 | 0.856658 | 2.771782e-62 | 6.663298e-59 |
| MsG0180005357.01 | MsG0880046996.01 | 0.862907 | 3.634494e-64 | 1.082036e-60 |
| MsG0180005358.01 | MsG0880046996.01 | 0.840563 | 8.062489e-58 | 1.152894e-54 |
| MsG0180005542.01 | MsG0880046996.01 | 0.875846 | 2.232053e-68 | 1.058418e-64 |
| MsG0180005648.01 | MsG0880046996.01 | 0.812981 | 3.225025e-51 | 2.080037e-48 |
| MsG0180005817.01 | MsG0880046996.01 | -0.824103 | 9.675897e-54 | 8.488849e-51 |
| MsG0180006212.01 | MsG0880046996.01 | -0.826308 | 2.912783e-54 | 2.721548e-51 |
| MsG0180006227.01 | MsG0880046996.01 | -0.824553 | 7.585472e-54 | 6.741487e-51 |
| MsG0280006381.01 | MsG0880046996.01 | -0.806057 | 9.893097e-50 | 5.317966e-47 |
| MsG0280006442.01 | MsG0880046996.01 | 0.811427 | 7.040997e-51 | 4.357272e-48 |
| MsG0280006452.01 | MsG0880046996.01 | -0.847494 | 1.116422e-59 | 1.987932e-56 |
| MsG0780040321.01 | MsG0880046996.01 | -0.809060 | 2.280291e-50 | 1.325359e-47 |
| MsG0780040480.01 | MsG0880046996.01 | 0.817860 | 2.648961e-52 | 1.951570e-49 |
| MsG0780040805.01 | MsG0880046996.01 | 0.837964 | 3.808602e-57 | 5.028342e-54 |
| MsG0780040806.01 | MsG0880046996.01 | 0.870047 | 1.959444e-66 | 7.516175e-63 |
| MsG0780041007.01 | MsG0880046996.01 | -0.800418 | 1.455038e-48 | 6.771725e-46 |
| MsG0780041079.01 | MsG0880046996.01 | 0.815893 | 7.319642e-52 | 5.109545e-49 |
| MsG0780041106.01 | MsG0880046996.01 | -0.813134 | 2.984324e-51 | 1.932729e-48 |
| MsG0780041133.01 | MsG0880046996.01 | 0.813376 | 2.640897e-51 | 1.721789e-48 |
| MsG0780041172.01 | MsG0880046996.01 | 0.815890 | 7.331124e-52 | 5.117135e-49 |
| MsG0780041173.01 | MsG0880046996.01 | -0.824705 | 6.983703e-54 | 6.234399e-51 |
| MsG0780041198.01 | MsG0880046996.01 | 0.858126 | 1.020434e-62 | 2.577187e-59 |
| MsG0780041254.01 | MsG0880046996.01 | -0.843643 | 1.235067e-58 | 1.945088e-55 |
| MsG0780041316.01 | MsG0880046996.01 | 0.850113 | 2.094486e-60 | 4.059092e-57 |
| MsG0780041380.01 | MsG0880046996.01 | 0.839286 | 1.735516e-57 | 2.385418e-54 |
| MsG0780041556.01 | MsG0880046996.01 | 0.898261 | 6.310973e-77 | 7.402556e-73 |
| MsG0780041574.01 | MsG0880046996.01 | 0.820055 | 8.394776e-53 | 6.572726e-50 |
| MsG0780041620.01 | MsG0880046996.01 | -0.836956 | 6.905270e-57 | 8.838799e-54 |
| MsG0780041720.01 | MsG0880046996.01 | -0.851563 | 8.181160e-61 | 1.662540e-57 |
| MsG0780041783.01 | MsG0880046996.01 | -0.854272 | 1.374799e-61 | 3.053984e-58 |
| MsG0780041809.01 | MsG0880046996.01 | -0.823480 | 1.354456e-53 | 1.167596e-50 |
| MsG0880041855.01 | MsG0880046996.01 | -0.852222 | 5.319817e-61 | 1.103969e-57 |
| MsG0880042500.01 | MsG0880046996.01 | -0.800620 | 1.322964e-48 | 6.188610e-46 |
| MsG0880042740.01 | MsG0880046996.01 | 0.860733 | 1.680774e-63 | 4.641355e-60 |
| MsG0880042810.01 | MsG0880046996.01 | 0.826127 | 3.216657e-54 | 2.990061e-51 |
| MsG0880042858.01 | MsG0880046996.01 | -0.852180 | 5.466605e-61 | 1.132954e-57 |
| MsG0880043017.01 | MsG0880046996.01 | 0.807901 | 4.031072e-50 | 2.272333e-47 |
| MsG0880043109.01 | MsG0880046996.01 | 0.810510 | 1.111982e-50 | 6.715645e-48 |
| MsG0880043185.01 | MsG0880046996.01 | 0.867205 | 1.625091e-65 | 5.626507e-62 |
| MsG0880043364.01 | MsG0880046996.01 | 0.859112 | 5.180371e-63 | 1.352665e-59 |
| MsG0880043481.01 | MsG0880046996.01 | 0.810570 | 1.079349e-50 | 6.528939e-48 |
| MsG0880043744.01 | MsG0880046996.01 | 0.857104 | 2.049110e-62 | 5.000686e-59 |
| MsG0880043824.01 | MsG0880046996.01 | 0.849713 | 2.709747e-60 | 5.182892e-57 |
| MsG0880043828.01 | MsG0880046996.01 | 0.878912 | 1.912260e-69 | 1.016205e-65 |
| MsG0280010704.01 | MsG0880046996.01 | -0.809094 | 2.242576e-50 | 1.304646e-47 |
| MsG0280010802.01 | MsG0880046996.01 | 0.854802 | 9.653733e-62 | 2.182394e-58 |
| MsG0280011041.01 | MsG0880046996.01 | 0.822425 | 2.384837e-53 | 1.995510e-50 |
| MsG0280011042.01 | MsG0880046996.01 | 0.827645 | 1.395494e-54 | 1.355226e-51 |
| MsG0280011053.01 | MsG0880046996.01 | 0.805589 | 1.241086e-49 | 6.591474e-47 |
| MsG0280011165.01 | MsG0880046996.01 | 0.877311 | 6.957282e-69 | 3.482573e-65 |
| MsG0280011193.01 | MsG0880046996.01 | 0.868619 | 5.708134e-66 | 2.078523e-62 |
| MsG0280011203.01 | MsG0880046996.01 | 0.863231 | 2.885620e-64 | 8.685845e-61 |
| MsG0280011238.01 | MsG0880046996.01 | 0.802641 | 5.094702e-49 | 2.508529e-46 |
| MsG0280011299.01 | MsG0880046996.01 | -0.803364 | 3.612100e-49 | 1.811584e-46 |
| MsG0280011301.01 | MsG0880046996.01 | -0.844931 | 5.569469e-59 | 9.132497e-56 |
| MsG0380011613.01 | MsG0880046996.01 | 0.875534 | 2.855866e-68 | 1.338213e-64 |
| MsG0380011635.01 | MsG0880046996.01 | 0.845362 | 4.257327e-59 | 7.077457e-56 |
| MsG0380011636.01 | MsG0880046996.01 | 0.817043 | 4.045829e-52 | 2.914775e-49 |
| MsG0380011638.01 | MsG0880046996.01 | 0.823683 | 1.213909e-53 | 1.052615e-50 |
| MsG0380011974.01 | MsG0880046996.01 | 0.813833 | 2.094870e-51 | 1.382752e-48 |
| MsG0380012099.01 | MsG0880046996.01 | 0.812148 | 4.903996e-51 | 3.093848e-48 |
| MsG0380012281.01 | MsG0880046996.01 | -0.835982 | 1.221757e-56 | 1.518669e-53 |
| MsG0380012400.01 | MsG0880046996.01 | 0.816543 | 5.238183e-52 | 3.722222e-49 |
| MsG0380012654.01 | MsG0880046996.01 | 0.825351 | 4.914681e-54 | 4.468533e-51 |
| MsG0380013100.01 | MsG0880046996.01 | 0.839908 | 1.196023e-57 | 1.675892e-54 |
| MsG0380013114.01 | MsG0880046996.01 | -0.851946 | 6.372017e-61 | 1.310564e-57 |
| MsG0380013272.01 | MsG0880046996.01 | 0.883000 | 6.493688e-71 | 4.044329e-67 |
| MsG0380013278.01 | MsG0880046996.01 | 0.871583 | 6.119941e-67 | 2.481912e-63 |
| MsG0380013300.01 | MsG0880046996.01 | 0.877915 | 4.283121e-69 | 2.192955e-65 |
| MsG0380013449.01 | MsG0880046996.01 | 0.811848 | 5.702893e-51 | 3.568491e-48 |
| MsG0380013452.01 | MsG0880046996.01 | 0.816981 | 4.178085e-52 | 3.005089e-49 |
| MsG0380013506.01 | MsG0880046996.01 | -0.836335 | 9.940587e-57 | 1.248983e-53 |
| MsG0380013956.01 | MsG0880046996.01 | -0.821495 | 3.917752e-53 | 3.192292e-50 |
| MsG0380014410.01 | MsG0880046996.01 | 0.801327 | 9.487429e-49 | 4.518237e-46 |
| MsG0380014642.01 | MsG0880046996.01 | -0.810169 | 1.317615e-50 | 7.886365e-48 |
| MsG0380014920.01 | MsG0880046996.01 | 0.800056 | 1.723554e-48 | 7.947891e-46 |
| MsG0680030719.01 | MsG0880046996.01 | 0.821600 | 3.703361e-53 | 3.026476e-50 |
| MsG0680030960.01 | MsG0880046996.01 | 0.828598 | 8.226743e-55 | 8.215063e-52 |
| MsG0680030961.01 | MsG0880046996.01 | 0.831355 | 1.749240e-55 | 1.893601e-52 |
| MsG0680031240.01 | MsG0880046996.01 | 0.865160 | 7.222421e-65 | 2.326739e-61 |
| MsG0680031429.01 | MsG0880046996.01 | 0.873377 | 1.541913e-67 | 6.676484e-64 |
| MsG0680031813.01 | MsG0880046996.01 | -0.857617 | 1.444609e-62 | 3.587158e-59 |
| MsG0680033618.01 | MsG0880046996.01 | 0.804716 | 1.889991e-49 | 9.815380e-47 |
| MsG0680034229.01 | MsG0880046996.01 | -0.862574 | 4.601105e-64 | 1.353807e-60 |
| MsG0680034255.01 | MsG0880046996.01 | 0.813139 | 2.977929e-51 | 1.928816e-48 |
| MsG0680034316.01 | MsG0880046996.01 | 0.837583 | 4.770987e-57 | 6.225297e-54 |
| MsG0680034317.01 | MsG0880046996.01 | 0.819170 | 1.336665e-52 | 1.020958e-49 |
| MsG0680035496.01 | MsG0880046996.01 | 0.838931 | 2.144295e-57 | 2.915577e-54 |
| MsG0480018463.01 | MsG0880046996.01 | -0.800869 | 1.177379e-48 | 5.542520e-46 |
| MsG0480018496.01 | MsG0880046996.01 | 0.853708 | 1.998980e-61 | 4.358203e-58 |
| MsG0480018563.01 | MsG0880046996.01 | 0.808605 | 2.852473e-50 | 1.638041e-47 |
| MsG0480018626.01 | MsG0880046996.01 | -0.829226 | 5.793777e-55 | 5.893520e-52 |
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| MsG0780040121.01 | MsG0880046996.01 | -0.829595 | 4.713298e-55 | 4.846251e-52 |
| MsG0780040144.01 | MsG0880046996.01 | 0.849326 | 3.474305e-60 | 6.563300e-57 |
| MsG0780040181.01 | MsG0880046996.01 | 0.856601 | 2.880857e-62 | 6.913701e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046996.01.T01 | MTR_4g118800 | 93.583 | 187 | 8 | 2 | 1 | 183 | 1 | 187 | 6.38e-108 | 306 |
| MsG0880046996.01.T01 | MTR_7g108130 | 34.177 | 158 | 91 | 4 | 28 | 177 | 30 | 182 | 5.20e-24 | 93.6 |
| MsG0880046996.01.T01 | MTR_2g020060 | 32.530 | 166 | 95 | 2 | 29 | 180 | 25 | 187 | 1.73e-21 | 87.0 |
| MsG0880046996.01.T01 | MTR_4g118810 | 32.168 | 143 | 81 | 2 | 28 | 156 | 34 | 174 | 4.80e-19 | 80.9 |
| MsG0880046996.01.T01 | MTR_0004s0210 | 32.903 | 155 | 89 | 4 | 29 | 179 | 10 | 153 | 5.49e-17 | 74.7 |
| MsG0880046996.01.T01 | MTR_5g041900 | 35.593 | 177 | 98 | 6 | 5 | 167 | 4 | 178 | 3.42e-16 | 73.2 |
| MsG0880046996.01.T01 | MTR_4g081880 | 30.864 | 162 | 99 | 5 | 25 | 177 | 27 | 184 | 4.76e-16 | 72.8 |
| MsG0880046996.01.T01 | MTR_7g011090 | 32.044 | 181 | 110 | 7 | 8 | 180 | 11 | 186 | 5.25e-16 | 72.4 |
| MsG0880046996.01.T01 | MTR_8g089300 | 30.496 | 141 | 84 | 3 | 29 | 156 | 28 | 167 | 6.98e-15 | 69.7 |
| MsG0880046996.01.T01 | MTR_7g083120 | 32.911 | 158 | 97 | 4 | 1 | 150 | 1 | 157 | 1.47e-13 | 65.9 |
| MsG0880046996.01.T01 | MTR_2g026530 | 33.333 | 156 | 98 | 3 | 28 | 177 | 32 | 187 | 6.71e-13 | 64.7 |
| MsG0880046996.01.T01 | MTR_2g026530 | 33.333 | 156 | 98 | 3 | 28 | 177 | 12 | 167 | 8.39e-13 | 63.9 |
| MsG0880046996.01.T01 | MTR_0097s0070 | 32.203 | 118 | 75 | 4 | 58 | 173 | 71 | 185 | 7.32e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046996.01.T01 | AT4G15610 | 51.786 | 168 | 70 | 3 | 3 | 161 | 7 | 172 | 2.51e-51 | 163 |
| MsG0880046996.01.T01 | AT3G06390 | 47.977 | 173 | 70 | 4 | 1 | 153 | 1 | 173 | 1.12e-47 | 154 |
| MsG0880046996.01.T01 | AT4G15610 | 62.766 | 94 | 35 | 0 | 68 | 161 | 23 | 116 | 7.82e-37 | 125 |
| MsG0880046996.01.T01 | AT4G15630 | 29.814 | 161 | 97 | 2 | 28 | 174 | 28 | 186 | 2.89e-19 | 81.3 |
| MsG0880046996.01.T01 | AT5G15290 | 32.353 | 136 | 83 | 4 | 28 | 156 | 29 | 162 | 4.35e-17 | 75.5 |
| MsG0880046996.01.T01 | AT4G15620 | 27.950 | 161 | 100 | 2 | 28 | 174 | 28 | 186 | 1.37e-16 | 74.3 |
| MsG0880046996.01.T01 | AT1G14160 | 33.898 | 118 | 74 | 3 | 59 | 174 | 87 | 202 | 1.35e-14 | 69.3 |
| MsG0880046996.01.T01 | AT2G36100 | 30.882 | 136 | 87 | 2 | 27 | 156 | 48 | 182 | 6.98e-13 | 64.7 |
| MsG0880046996.01.T01 | AT1G03700 | 28.758 | 153 | 97 | 3 | 29 | 177 | 11 | 155 | 1.64e-11 | 60.1 |
Find 49 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGTGTGGTACATGATTT+TGG | 0.138071 | 8:-80774395 | MsG0880046996.01.T01:three_prime_UTR |
| AGCTGGGAGTGTTGCATATT+TGG | 0.167909 | 8:-80774789 | MsG0880046996.01.T01:CDS |
| TTCTCCTCCATTTAATCTTC+TGG | 0.173285 | 8:-80774953 | MsG0880046996.01.T01:CDS |
| GTGGCTGCATTCTCTGTTGC+TGG | 0.248825 | 8:-80775044 | MsG0880046996.01.T01:CDS |
| TTGTCACTCTGTTGCTCATT+TGG | 0.263577 | 8:-80774661 | MsG0880046996.01.T01:CDS |
| CCGCATCCCAGAAGATTAAA+TGG | 0.293656 | 8:+80774946 | None:intergenic |
| GCTGGGAGTGTTGCATATTT+GGG | 0.294630 | 8:-80774788 | MsG0880046996.01.T01:CDS |
| AGGGAAACAACCACACTAAT+TGG | 0.296811 | 8:-80774760 | MsG0880046996.01.T01:CDS |
| TCAGTTGTTGTGATGGTTAC+TGG | 0.316039 | 8:-80776277 | MsG0880046996.01.T01:CDS |
| TTCAACTCCGGCTTCGGCTT+CGG | 0.328408 | 8:-80776365 | MsG0880046996.01.T01:CDS |
| GATTAAATGGAGGAGAAGTT+TGG | 0.346130 | 8:+80774959 | None:intergenic |
| TCTCCTCCATTTAATCTTCT+GGG | 0.353459 | 8:-80774952 | MsG0880046996.01.T01:CDS |
| CAACTTTCTTCGAATCTACT+TGG | 0.362939 | 8:+80774607 | None:intergenic |
| ATCATCTTCAACTCCGGCTT+CGG | 0.372228 | 8:-80776371 | MsG0880046996.01.T01:CDS |
| GGGATATTAGCTTCAGCAAC+AGG | 0.379873 | 8:-80774815 | MsG0880046996.01.T01:CDS |
| ATTCTCTTGCAGGTGATGTT+GGG | 0.411611 | 8:-80774836 | MsG0880046996.01.T01:intron |
| GCTTCAGCAACAGGCACAGC+TGG | 0.420135 | 8:-80774806 | MsG0880046996.01.T01:CDS |
| TCTGTAGCAGTGGGATTGTT+TGG | 0.423026 | 8:-80774689 | MsG0880046996.01.T01:CDS |
| TGGCTGCATTCTCTGTTGCT+GGG | 0.437451 | 8:-80775043 | MsG0880046996.01.T01:CDS |
| CTAAGTATGATTTGATCCTA+AGG | 0.459604 | 8:-80776327 | MsG0880046996.01.T01:CDS |
| GTAAAATACAATGTGCTCCT+TGG | 0.462608 | 8:+80774423 | None:intergenic |
| TGTTGCATATTTGGGTTTGA+AGG | 0.466255 | 8:-80774780 | MsG0880046996.01.T01:CDS |
| GATTCTCTTGCAGGTGATGT+TGG | 0.466475 | 8:-80774837 | MsG0880046996.01.T01:intron |
| ACTCCGGCTTCGGCTTCGGT+TGG | 0.487941 | 8:-80776361 | MsG0880046996.01.T01:CDS |
| GTTGAAGATGATTTGTACTC+AGG | 0.496735 | 8:+80776382 | None:intergenic |
| AAGTAAGACATGGCTTCTAC+TGG | 0.498667 | 8:-80776409 | MsG0880046996.01.T01:exon |
| AACTTTCTTCGAATCTACTT+GGG | 0.503750 | 8:+80774608 | None:intergenic |
| TGCAAAACTTACACAAAGGC+TGG | 0.513124 | 8:+80776211 | None:intergenic |
| TCTGTTGTTTGCAGCATCAG+TGG | 0.515368 | 8:-80776302 | MsG0880046996.01.T01:CDS |
| GGCTGGTGAGTATCTAAACT+TGG | 0.516960 | 8:+80776228 | None:intergenic |
| GTTGCATATTTGGGTTTGAA+GGG | 0.522790 | 8:-80774779 | MsG0880046996.01.T01:CDS |
| TTTGAGGTTTGGCTTTCGGA+TGG | 0.533858 | 8:+80774983 | None:intergenic |
| CTGCAAACAACAGAAACCTT+AGG | 0.533947 | 8:+80776311 | None:intergenic |
| GGTGAGTATCTAAACTTGGC+TGG | 0.534764 | 8:+80776232 | None:intergenic |
| CCATTTAATCTTCTGGGATG+CGG | 0.538436 | 8:-80774946 | MsG0880046996.01.T01:intron |
| TATTGGTGCCTCTGTAGCAG+TGG | 0.549094 | 8:-80774699 | MsG0880046996.01.T01:CDS |
| GTACAAATCATCTTCAACTC+CGG | 0.560040 | 8:-80776377 | MsG0880046996.01.T01:CDS |
| ACACCAACCGAAGCCGAAGC+CGG | 0.563087 | 8:+80776358 | None:intergenic |
| AAACAATCCCACTGCTACAG+AGG | 0.565188 | 8:+80774691 | None:intergenic |
| ATTGGTGCCTCTGTAGCAGT+GGG | 0.574405 | 8:-80774698 | MsG0880046996.01.T01:CDS |
| CTTCAGCAACAGGCACAGCT+GGG | 0.583484 | 8:-80774805 | MsG0880046996.01.T01:CDS |
| AGTGGCATCAGTTGTTGTGA+TGG | 0.612540 | 8:-80776284 | MsG0880046996.01.T01:CDS |
| AGTAGATTCGAAGAAAGTTG+TGG | 0.613149 | 8:-80774604 | MsG0880046996.01.T01:exon |
| TTCTCTTGCAGGTGATGTTG+GGG | 0.618127 | 8:-80774835 | MsG0880046996.01.T01:intron |
| TTTGTTTAGCAAGTAAGACA+TGG | 0.639606 | 8:-80776419 | MsG0880046996.01.T01:exon |
| AGATTGAATAATTAACCAAG+TGG | 0.664798 | 8:-80774345 | MsG0880046996.01.T01:three_prime_UTR |
| TGCAAAACTTGTCATAGATG+TGG | 0.673434 | 8:+80774726 | None:intergenic |
| GTGTAATTAATTATCTACCA+AGG | 0.681836 | 8:-80774440 | MsG0880046996.01.T01:three_prime_UTR |
| CATCCCAGAAGATTAAATGG+AGG | 0.717011 | 8:+80774949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTGTAACATAAA+TGG | + | Chr8:80774838-80774857 | None:intergenic | 10.0% |
| !! | TTGATAAAAACAATTAATAT+AGG | + | Chr8:80775653-80775672 | None:intergenic | 10.0% |
| !! | AATGAAATTGAGTTATTAAT+AGG | + | Chr8:80775416-80775435 | None:intergenic | 15.0% |
| !! | AATTAATATAGGTCTTAATA+TGG | + | Chr8:80775642-80775661 | None:intergenic | 15.0% |
| !!! | TCAATCTATTTTATATTTGT+GGG | + | Chr8:80776407-80776426 | None:intergenic | 15.0% |
| !!! | TTCAATCTATTTTATATTTG+TGG | + | Chr8:80776408-80776427 | None:intergenic | 15.0% |
| !! | AAGGTAAAAATGGAATTAAA+AGG | + | Chr8:80775862-80775881 | None:intergenic | 20.0% |
| !! | TAGTTATTTGCAATATTCTT+TGG | - | Chr8:80774697-80774716 | MsG0880046996.01.T01:CDS | 20.0% |
| !!! | TATTCATTAACTTTTTTCTG+AGG | + | Chr8:80775390-80775409 | None:intergenic | 20.0% |
| !!! | TATTTTACATTCTATTAGTG+TGG | - | Chr8:80776357-80776376 | MsG0880046996.01.T01:CDS | 20.0% |
| ! | AATAAATTTCACTATTGGCA+AGG | + | Chr8:80774939-80774958 | None:intergenic | 25.0% |
| ! | ACAAAGCTGTATAAATCAAA+TGG | + | Chr8:80775123-80775142 | None:intergenic | 25.0% |
| ! | ACATAACTAACGATATTGTA+GGG | - | Chr8:80774891-80774910 | MsG0880046996.01.T01:intron | 25.0% |
| ! | AGATTGAATAATTAACCAAG+TGG | - | Chr8:80776420-80776439 | MsG0880046996.01.T01:exon | 25.0% |
| ! | AGTATTTAGCAAGGTAAAAA+TGG | + | Chr8:80775872-80775891 | None:intergenic | 25.0% |
| ! | CAGAGAATAAATTTCACTAT+TGG | + | Chr8:80774944-80774963 | None:intergenic | 25.0% |
| ! | GAGTATAATAGTATTTAGCA+AGG | + | Chr8:80775881-80775900 | None:intergenic | 25.0% |
| ! | GTATAAATCAAATGGAGAAT+TGG | + | Chr8:80775115-80775134 | None:intergenic | 25.0% |
| ! | GTGTAATTAATTATCTACCA+AGG | - | Chr8:80776325-80776344 | MsG0880046996.01.T01:CDS | 25.0% |
| ! | TAATATAGGTCTTAATATGG+TGG | + | Chr8:80775639-80775658 | None:intergenic | 25.0% |
| ! | TTTAAATCGAACAAATTCCT+TGG | - | Chr8:80774791-80774810 | MsG0880046996.01.T01:CDS | 25.0% |
| !! | AAATTTTATGCCAATTAGTG+TGG | + | Chr8:80776018-80776037 | None:intergenic | 25.0% |
| !! | CAATAATCACAGATATTTTG+TGG | - | Chr8:80775702-80775721 | MsG0880046996.01.T01:intron | 25.0% |
| !! | CTTACTTGCTAAACAAAAAT+TGG | + | Chr8:80774343-80774362 | None:intergenic | 25.0% |
| !!! | ATCTCTCTCTTTAATTTTGA+TGG | + | Chr8:80775487-80775506 | None:intergenic | 25.0% |
| !!! | GAAATACACAGTTTTTTTGA+AGG | - | Chr8:80775205-80775224 | MsG0880046996.01.T01:intron | 25.0% |
| !!! | TCTCTCTCTTTAATTTTGAT+GGG | + | Chr8:80775486-80775505 | None:intergenic | 25.0% |
| AACTTTCTTCGAATCTACTT+GGG | + | Chr8:80776160-80776179 | None:intergenic | 30.0% | |
| ACATGACTATCTTTCATAGA+AGG | + | Chr8:80774736-80774755 | None:intergenic | 30.0% | |
| AGAGATGATATATACATGCA+TGG | + | Chr8:80775312-80775331 | None:intergenic | 30.0% | |
| ATCATGCAAAACTTACACAA+AGG | + | Chr8:80774561-80774580 | None:intergenic | 30.0% | |
| ATTAATAAGCACCTTCATTG+TGG | + | Chr8:80775557-80775576 | None:intergenic | 30.0% | |
| CATAACTAACGATATTGTAG+GGG | - | Chr8:80774892-80774911 | MsG0880046996.01.T01:intron | 30.0% | |
| CTAAGTATGATTTGATCCTA+AGG | - | Chr8:80774438-80774457 | MsG0880046996.01.T01:three_prime_UTR | 30.0% | |
| GACATAACTAACGATATTGT+AGG | - | Chr8:80774890-80774909 | MsG0880046996.01.T01:intron | 30.0% | |
| GTTTGAATTTCAACTAAGAG+AGG | + | Chr8:80774771-80774790 | None:intergenic | 30.0% | |
| TAATATGGTGGTAACATATG+TGG | + | Chr8:80775627-80775646 | None:intergenic | 30.0% | |
| TTTGTTTAGCAAGTAAGACA+TGG | - | Chr8:80774346-80774365 | MsG0880046996.01.T01:three_prime_UTR | 30.0% | |
| ! | ATTAGTGTGGTACATGATTT+TGG | - | Chr8:80776370-80776389 | MsG0880046996.01.T01:CDS | 30.0% |
| ! | TATTAATTCCGGTGCTAAAT+AGG | - | Chr8:80775570-80775589 | MsG0880046996.01.T01:intron | 30.0% |
| !! | ATGAAGGTGCTTATTAATTC+CGG | - | Chr8:80775559-80775578 | MsG0880046996.01.T01:intron | 30.0% |
| !!! | CAGTTTTTTTGAAGGCTATA+AGG | - | Chr8:80775213-80775232 | MsG0880046996.01.T01:intron | 30.0% |
| !!! | TTTTTTTGAAGGCTATAAGG+AGG | - | Chr8:80775216-80775235 | MsG0880046996.01.T01:intron | 30.0% |
| AGTAGATTCGAAGAAAGTTG+TGG | - | Chr8:80776161-80776180 | MsG0880046996.01.T01:intron | 35.0% | |
| CAACTTTCTTCGAATCTACT+TGG | + | Chr8:80776161-80776180 | None:intergenic | 35.0% | |
| CATTGTGGAGAGAAAATGTT+TGG | + | Chr8:80775542-80775561 | None:intergenic | 35.0% | |
| GATTAAATGGAGGAGAAGTT+TGG | + | Chr8:80775809-80775828 | None:intergenic | 35.0% | |
| GTAAAATACAATGTGCTCCT+TGG | + | Chr8:80776345-80776364 | None:intergenic | 35.0% | |
| GTACAAATCATCTTCAACTC+CGG | - | Chr8:80774388-80774407 | MsG0880046996.01.T01:three_prime_UTR | 35.0% | |
| GTTGTTAAGCTAAGTATCCA+AGG | + | Chr8:80774811-80774830 | None:intergenic | 35.0% | |
| TCTATGTTAGGTGCTTAAGT+GGG | - | Chr8:80775286-80775305 | MsG0880046996.01.T01:intron | 35.0% | |
| TCTCCTCCATTTAATCTTCT+GGG | - | Chr8:80775813-80775832 | MsG0880046996.01.T01:intron | 35.0% | |
| TGCAAAACTTGTCATAGATG+TGG | + | Chr8:80776042-80776061 | None:intergenic | 35.0% | |
| TTATCCAATGATTCTCTTGC+AGG | - | Chr8:80775919-80775938 | MsG0880046996.01.T01:intron | 35.0% | |
| TTCTCCTCCATTTAATCTTC+TGG | - | Chr8:80775812-80775831 | MsG0880046996.01.T01:intron | 35.0% | |
| ! | ACATCTATGACAAGTTTTGC+AGG | - | Chr8:80776041-80776060 | MsG0880046996.01.T01:intron | 35.0% |
| ! | ACATTTTCTCTCCACAATGA+AGG | - | Chr8:80775543-80775562 | MsG0880046996.01.T01:intron | 35.0% |
| ! | GTTGAAGATGATTTGTACTC+AGG | + | Chr8:80774386-80774405 | None:intergenic | 35.0% |
| ! | GTTGCATATTTGGGTTTGAA+GGG | - | Chr8:80775986-80776005 | MsG0880046996.01.T01:intron | 35.0% |
| ! | TGGTCTTAAACAAGTCATCA+TGG | + | Chr8:80775251-80775270 | None:intergenic | 35.0% |
| ! | TGTTGCATATTTGGGTTTGA+AGG | - | Chr8:80775985-80776004 | MsG0880046996.01.T01:intron | 35.0% |
| !! | ATGTTTGGTGCTTATAGAGA+AGG | + | Chr8:80775527-80775546 | None:intergenic | 35.0% |
| !! | TGTTTGGTGCTTATAGAGAA+GGG | + | Chr8:80775526-80775545 | None:intergenic | 35.0% |
| !!! | AGAAGTTTGGTTTTGAGGTT+TGG | + | Chr8:80775796-80775815 | None:intergenic | 35.0% |
| !!! | TAACTTTTTTCTGAGGTGCT+GGG | + | Chr8:80775383-80775402 | None:intergenic | 35.0% |
| !!! | TTAACTTTTTTCTGAGGTGC+TGG | + | Chr8:80775384-80775403 | None:intergenic | 35.0% |
| AAGTAAGACATGGCTTCTAC+TGG | - | Chr8:80774356-80774375 | MsG0880046996.01.T01:three_prime_UTR | 40.0% | |
| AGGGAAACAACCACACTAAT+TGG | - | Chr8:80776005-80776024 | MsG0880046996.01.T01:intron | 40.0% | |
| ATCACCTGCAAGAGAATCAT+TGG | + | Chr8:80775926-80775945 | None:intergenic | 40.0% | |
| ATTCTCTTGCAGGTGATGTT+GGG | - | Chr8:80775929-80775948 | MsG0880046996.01.T01:intron | 40.0% | |
| CATCCCAGAAGATTAAATGG+AGG | + | Chr8:80775819-80775838 | None:intergenic | 40.0% | |
| CTCTATGTTAGGTGCTTAAG+TGG | - | Chr8:80775285-80775304 | MsG0880046996.01.T01:intron | 40.0% | |
| CTGCAAACAACAGAAACCTT+AGG | + | Chr8:80774457-80774476 | None:intergenic | 40.0% | |
| GTGCTTAACCTATTTAGCAC+CGG | + | Chr8:80775581-80775600 | None:intergenic | 40.0% | |
| TCAGTTGTTGTGATGGTTAC+TGG | - | Chr8:80774488-80774507 | MsG0880046996.01.T01:three_prime_UTR | 40.0% | |
| TGCAAAACTTACACAAAGGC+TGG | + | Chr8:80774557-80774576 | None:intergenic | 40.0% | |
| TTGTCACTCTGTTGCTCATT+TGG | - | Chr8:80776104-80776123 | MsG0880046996.01.T01:intron | 40.0% | |
| ! | ATAGAGTGCTCTGTTGCATA+TGG | + | Chr8:80775271-80775290 | None:intergenic | 40.0% |
| ! | GACAAGTTTTGCAGGCATAT+TGG | - | Chr8:80776049-80776068 | MsG0880046996.01.T01:intron | 40.0% |
| !! | CCATTTAATCTTCTGGGATG+CGG | - | Chr8:80775819-80775838 | MsG0880046996.01.T01:intron | 40.0% |
| !!! | TGGTTTTGAGGTTTGGCTTT+CGG | + | Chr8:80775789-80775808 | None:intergenic | 40.0% |
| AAACAATCCCACTGCTACAG+AGG | + | Chr8:80776077-80776096 | None:intergenic | 45.0% | |
| AGTGGCATCAGTTGTTGTGA+TGG | - | Chr8:80774481-80774500 | MsG0880046996.01.T01:three_prime_UTR | 45.0% | |
| ATCATCTTCAACTCCGGCTT+CGG | - | Chr8:80774394-80774413 | MsG0880046996.01.T01:three_prime_UTR | 45.0% | |
| CCGCATCCCAGAAGATTAAA+TGG | + | Chr8:80775822-80775841 | None:intergenic | 45.0% | |
| GATTCTCTTGCAGGTGATGT+TGG | - | Chr8:80775928-80775947 | MsG0880046996.01.T01:intron | 45.0% | |
| GGCTGGTGAGTATCTAAACT+TGG | + | Chr8:80774540-80774559 | None:intergenic | 45.0% | |
| GGTGAGTATCTAAACTTGGC+TGG | + | Chr8:80774536-80774555 | None:intergenic | 45.0% | |
| TCTGTAGCAGTGGGATTGTT+TGG | - | Chr8:80776076-80776095 | MsG0880046996.01.T01:intron | 45.0% | |
| TTCTCTTGCAGGTGATGTTG+GGG | - | Chr8:80775930-80775949 | MsG0880046996.01.T01:intron | 45.0% | |
| ! | CTTAGAGCATCCACAATGGT+GGG | + | Chr8:80775603-80775622 | None:intergenic | 45.0% |
| ! | GCAACAGAGCACTCTATGTT+AGG | - | Chr8:80775274-80775293 | MsG0880046996.01.T01:intron | 45.0% |
| ! | GGGATATTAGCTTCAGCAAC+AGG | - | Chr8:80775950-80775969 | MsG0880046996.01.T01:intron | 45.0% |
| ! | TCTGTTGTTTGCAGCATCAG+TGG | - | Chr8:80774463-80774482 | MsG0880046996.01.T01:three_prime_UTR | 45.0% |
| ! | TCTTAGAGCATCCACAATGG+TGG | + | Chr8:80775604-80775623 | None:intergenic | 45.0% |
| ! | TGGTCTTAGAGCATCCACAA+TGG | + | Chr8:80775607-80775626 | None:intergenic | 45.0% |
| ! | TTGGTGCTTATAGAGAAGGG+TGG | + | Chr8:80775523-80775542 | None:intergenic | 45.0% |
| !! | AGCTGGGAGTGTTGCATATT+TGG | - | Chr8:80775976-80775995 | MsG0880046996.01.T01:intron | 45.0% |
| !! | GCTGGGAGTGTTGCATATTT+GGG | - | Chr8:80775977-80775996 | MsG0880046996.01.T01:intron | 45.0% |
| !! | TTTGAGGTTTGGCTTTCGGA+TGG | + | Chr8:80775785-80775804 | None:intergenic | 45.0% |
| !!! | GGAGGAGAAGTTTGGTTTTG+AGG | + | Chr8:80775801-80775820 | None:intergenic | 45.0% |
| !!! | TTTTTTCTGAGGTGCTGGGT+TGG | + | Chr8:80775379-80775398 | None:intergenic | 45.0% |
| !! | GAAATAATAATAATAATAAA+CGG | + | Chr8:80775081-80775100 | None:intergenic | 5.0% |
| AGGTTAAGCACCCACCATTG+TGG | - | Chr8:80775590-80775609 | MsG0880046996.01.T01:intron | 50.0% | |
| TGGCTGCATTCTCTGTTGCT+GGG | - | Chr8:80775722-80775741 | MsG0880046996.01.T01:intron | 50.0% | |
| ! | ATTGGTGCCTCTGTAGCAGT+GGG | - | Chr8:80776067-80776086 | MsG0880046996.01.T01:intron | 50.0% |
| ! | TATTGGTGCCTCTGTAGCAG+TGG | - | Chr8:80776066-80776085 | MsG0880046996.01.T01:intron | 50.0% |
| CTTCAGCAACAGGCACAGCT+GGG | - | Chr8:80775960-80775979 | MsG0880046996.01.T01:intron | 55.0% | |
| GTGGCTGCATTCTCTGTTGC+TGG | - | Chr8:80775721-80775740 | MsG0880046996.01.T01:intron | 55.0% | |
| TTCAACTCCGGCTTCGGCTT+CGG | - | Chr8:80774400-80774419 | MsG0880046996.01.T01:three_prime_UTR | 55.0% | |
| ! | GGTGCTGGGTTGGAGAGATT+AGG | + | Chr8:80775369-80775388 | None:intergenic | 55.0% |
| ACACCAACCGAAGCCGAAGC+CGG | + | Chr8:80774410-80774429 | None:intergenic | 60.0% | |
| GCTTCAGCAACAGGCACAGC+TGG | - | Chr8:80775959-80775978 | MsG0880046996.01.T01:intron | 60.0% | |
| ACTCCGGCTTCGGCTTCGGT+TGG | - | Chr8:80774404-80774423 | MsG0880046996.01.T01:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 80774336 | 80776451 | 80774336 | ID=MsG0880046996.01;Name=MsG0880046996.01 |
| Chr8 | mRNA | 80774336 | 80776451 | 80774336 | ID=MsG0880046996.01.T01;Parent=MsG0880046996.01;Name=MsG0880046996.01.T01;_AED=0.49;_eAED=0.49;_QI=29|1|1|1|1|1|3|286|183 |
| Chr8 | exon | 80774336 | 80774846 | 80774336 | ID=MsG0880046996.01.T01:exon:10500;Parent=MsG0880046996.01.T01 |
| Chr8 | exon | 80774947 | 80775073 | 80774947 | ID=MsG0880046996.01.T01:exon:10499;Parent=MsG0880046996.01.T01 |
| Chr8 | exon | 80776223 | 80776451 | 80776223 | ID=MsG0880046996.01.T01:exon:10498;Parent=MsG0880046996.01.T01 |
| Chr8 | five_prime_UTR | 80776423 | 80776451 | 80776423 | ID=MsG0880046996.01.T01:five_prime_utr;Parent=MsG0880046996.01.T01 |
| Chr8 | CDS | 80776223 | 80776422 | 80776223 | ID=MsG0880046996.01.T01:cds;Parent=MsG0880046996.01.T01 |
| Chr8 | CDS | 80774947 | 80775073 | 80774947 | ID=MsG0880046996.01.T01:cds;Parent=MsG0880046996.01.T01 |
| Chr8 | CDS | 80774622 | 80774846 | 80774622 | ID=MsG0880046996.01.T01:cds;Parent=MsG0880046996.01.T01 |
| Chr8 | three_prime_UTR | 80774336 | 80774621 | 80774336 | ID=MsG0880046996.01.T01:three_prime_utr;Parent=MsG0880046996.01.T01 |
| Gene Sequence |
| Protein sequence |
