AlfalfaGEDB | MsG0280007840.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007840.01

KEGG: -
GO: GO:0003700 GO:0006355 GO:0043565
PFAM: PF03106

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007840.01.T01	AFK35708.1	92.308	273	19	2	30	301	108	379	4.68E-143	418

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007840.01.T01	O22900	51.172	256	102	7	44	293	99	337	3.53E-56	187

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007840.01.T01	I3S616	92.308	273	19	2	30	301	108	379	2.23e-143	418

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048692.01	MsG0280007840.01	-0.809884	1.517315e-50	9.014359e-48
MsG0080048800.01	MsG0280007840.01	-0.812778	3.573109e-51	2.292131e-48
MsG0080049076.01	MsG0280007840.01	-0.805782	1.130272e-49	6.033074e-47
MsG0180000337.01	MsG0280007840.01	0.811217	7.819447e-51	4.812106e-48
MsG0180002214.01	MsG0280007840.01	-0.814952	1.185642e-51	8.066189e-49
MsG0180002546.01	MsG0280007840.01	-0.836536	8.833406e-57	1.116439e-53
MsG0180004491.01	MsG0280007840.01	0.835637	1.494325e-56	1.838150e-53
MsG0180004752.01	MsG0280007840.01	0.870695	1.201307e-66	4.716340e-63
MsG0180005817.01	MsG0280007840.01	-0.802617	5.153502e-49	2.535990e-46
MsG0180005959.01	MsG0280007840.01	0.822714	2.043362e-53	1.723818e-50
MsG0180006012.01	MsG0280007840.01	0.824139	9.491042e-54	8.335482e-51
MsG0280007052.01	MsG0280007840.01	0.800925	1.146376e-48	5.404428e-46
MsG0280007840.01	MsG0280009971.01	0.835216	1.909273e-56	2.319426e-53
MsG0280007840.01	MsG0280011152.01	0.842979	1.857332e-58	2.863933e-55
MsG0280007840.01	MsG0280011350.01	0.800054	1.725583e-48	7.956781e-46
MsG0280007840.01	MsG0380012008.01	0.803030	4.235050e-49	2.105973e-46
MsG0280007840.01	MsG0380013940.01	-0.806500	7.980835e-50	4.338640e-47
MsG0280007840.01	MsG0380013945.01	-0.825842	3.760665e-54	3.467700e-51
MsG0280007840.01	MsG0380013953.01	-0.823561	1.296652e-53	1.120308e-50
MsG0280007840.01	MsG0380013956.01	-0.800855	1.185040e-48	5.576724e-46
MsG0280007840.01	MsG0380013957.01	-0.831412	1.693727e-55	1.836499e-52
MsG0280007840.01	MsG0380013966.01	-0.806276	8.899511e-50	4.810645e-47
MsG0280007840.01	MsG0380013967.01	-0.830269	3.229975e-55	3.386452e-52
MsG0280007840.01	MsG0380013971.01	-0.818298	2.108445e-52	1.572149e-49
MsG0280007840.01	MsG0380013977.01	-0.826432	2.721280e-54	2.551719e-51
MsG0280007840.01	MsG0380014005.01	-0.801699	7.960603e-49	3.826686e-46
MsG0280007840.01	MsG0380014006.01	-0.824836	6.502723e-54	5.826701e-51
MsG0280007840.01	MsG0380014032.01	-0.827412	1.586875e-54	1.530964e-51
MsG0280007840.01	MsG0380016270.01	0.803875	2.828634e-49	1.437603e-46
MsG0280007840.01	MsG0380016926.01	0.821683	3.544997e-53	2.903980e-50
MsG0280007840.01	MsG0380016931.01	-0.804215	2.403800e-49	1.232298e-46
MsG0280007840.01	MsG0380017690.01	0.805664	1.196748e-49	6.368372e-47
MsG0280007840.01	MsG0380017766.01	0.804457	2.141028e-49	1.104426e-46
MsG0280007840.01	MsG0380018026.01	0.823839	1.115938e-53	9.718557e-51
MsG0280007840.01	MsG0480018500.01	0.821518	3.870218e-53	3.155545e-50
MsG0280007840.01	MsG0480019038.01	0.807128	5.880391e-50	3.248845e-47
MsG0280007840.01	MsG0480019726.01	0.816699	4.833485e-52	3.449378e-49
MsG0280007840.01	MsG0480019880.01	0.826780	2.248721e-54	2.129485e-51
MsG0280007840.01	MsG0480020444.01	0.855866	4.733432e-62	1.108449e-58
MsG0280007840.01	MsG0480021642.01	0.817045	4.042219e-52	2.912331e-49
MsG0280007840.01	MsG0480022125.01	0.836789	7.615113e-57	9.698992e-54
MsG0280007840.01	MsG0480022520.01	0.838149	3.414517e-57	4.532701e-54
MsG0280007840.01	MsG0480022760.01	0.822044	2.924406e-53	2.420208e-50
MsG0280007840.01	MsG0480022974.01	0.822583	2.191787e-53	1.842306e-50
MsG0280007840.01	MsG0480023318.01	0.843198	1.624204e-58	2.521756e-55
MsG0280007840.01	MsG0580024871.01	0.811901	5.552293e-51	3.479164e-48
MsG0280007840.01	MsG0580024999.01	0.846065	2.745019e-59	4.668079e-56
MsG0280007840.01	MsG0580028355.01	0.829485	5.013551e-55	5.138219e-52
MsG0280007840.01	MsG0580028560.01	0.812814	3.507909e-51	2.252395e-48
MsG0280007840.01	MsG0580029583.01	0.823702	1.201246e-53	1.042242e-50
MsG0280007840.01	MsG0580029798.01	0.854810	9.604777e-62	2.171948e-58
MsG0280007840.01	MsG0580029901.01	0.800437	1.442166e-48	6.714991e-46
MsG0280007840.01	MsG0580029930.01	0.816929	4.292286e-52	3.082646e-49
MsG0280007840.01	MsG0680035741.01	0.805751	1.147576e-49	6.120754e-47
MsG0280007840.01	MsG0680035841.01	0.829518	4.921344e-55	5.048597e-52
MsG0280007840.01	MsG0680035842.01	0.824976	6.026355e-54	5.421443e-51
MsG0280007840.01	MsG0780037599.01	0.838807	2.308636e-57	3.127172e-54
MsG0280007840.01	MsG0780039450.01	0.815761	7.831703e-52	5.447952e-49
MsG0280007840.01	MsG0780040144.01	0.874931	4.590824e-68	2.104880e-64
MsG0280007840.01	MsG0780041173.01	-0.800736	1.252855e-48	5.877970e-46
MsG0280007840.01	MsG0780041380.01	0.825335	4.957520e-54	4.505627e-51
MsG0280007840.01	MsG0780041589.01	0.801320	9.521439e-49	4.533580e-46
MsG0280007840.01	MsG0880041985.01	0.816905	4.345725e-52	3.118903e-49
MsG0280007840.01	MsG0880042368.01	0.801738	7.816015e-49	3.760865e-46
MsG0280007840.01	MsG0880043109.01	0.805282	1.439139e-49	7.583123e-47
MsG0280007840.01	MsG0880043685.01	0.811862	5.662069e-51	3.544300e-48
MsG0280007840.01	MsG0880043715.01	0.853989	1.659417e-61	3.651823e-58
MsG0280007840.01	MsG0880044669.01	0.813576	2.386401e-51	1.564298e-48
MsG0280007840.01	MsG0880045256.01	0.819140	1.358224e-52	1.036495e-49
MsG0280007840.01	MsG0880045861.01	0.836441	9.340554e-57	1.177249e-53
MsG0280007840.01	MsG0880045907.01	0.802053	6.734478e-49	3.266653e-46
MsG0280007840.01	MsG0880046251.01	-0.815806	7.656453e-52	5.332214e-49
MsG0280007840.01	MsG0880047081.01	0.800297	1.540064e-48	7.145505e-46
MsG0280007840.01	MsG0880047256.01	0.822323	2.519466e-53	2.101917e-50
MsG0280007840.01	MsG0880047491.01	0.801656	8.125103e-49	3.901502e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007840.01.T01	MTR_2g033820	92.308	273	19	2	30	301	109	380	5.86e-147	418
MsG0280007840.01.T01	MTR_1g086790	51.984	252	103	6	40	287	80	317	6.32e-62	199
MsG0280007840.01.T01	MTR_7g109800	59.589	146	48	1	42	187	74	208	4.41e-50	168
MsG0280007840.01.T01	MTR_5g043880	43.415	205	85	4	98	297	98	276	3.79e-45	154
MsG0280007840.01.T01	MTR_4g122530	40.385	260	102	7	70	287	160	408	1.41e-44	157
MsG0280007840.01.T01	MTR_4g094588	58.779	131	53	1	70	199	123	253	1.85e-41	146
MsG0280007840.01.T01	MTR_5g091390	78.750	80	17	0	110	189	143	222	3.54e-40	142
MsG0280007840.01.T01	MTR_1g015140	67.500	80	26	0	102	181	80	159	1.40e-33	121
MsG0280007840.01.T01	MTR_8g007270	66.667	87	28	1	98	184	128	213	1.69e-33	122
MsG0280007840.01.T01	MTR_7g079010	69.620	79	24	0	104	182	121	199	3.53e-33	121
MsG0280007840.01.T01	MTR_3g104750	68.750	80	24	1	104	182	83	162	4.30e-32	117
MsG0280007840.01.T01	MTR_7g028415	68.000	75	24	0	112	186	81	155	6.53e-32	117
MsG0280007840.01.T01	MTR_7g028710	68.000	75	24	0	112	186	81	155	6.53e-32	117
MsG0280007840.01.T01	MTR_3g095080	57.843	102	37	1	85	180	123	224	1.40e-31	118
MsG0280007840.01.T01	MTR_3g095080	57.843	102	37	1	85	180	99	200	1.90e-31	117
MsG0280007840.01.T01	MTR_8g092010	47.107	121	63	1	75	194	59	179	1.09e-30	114
MsG0280007840.01.T01	MTR_3g095040	58.140	86	35	1	110	194	104	189	3.74e-30	113
MsG0280007840.01.T01	MTR_5g094430	50.427	117	52	1	89	199	189	305	3.75e-30	118
MsG0280007840.01.T01	MTR_5g094430	58.730	63	25	1	124	186	66	127	3.10e-16	79.0
MsG0280007840.01.T01	MTR_7g011820	50.909	110	50	1	80	185	362	471	4.29e-30	119
MsG0280007840.01.T01	MTR_7g011820	47.872	94	33	2	109	187	198	290	1.08e-18	86.7
MsG0280007840.01.T01	MTR_5g094430	50.427	117	52	1	89	199	211	327	4.75e-30	118
MsG0280007840.01.T01	MTR_5g094430	58.730	63	25	1	124	186	88	149	2.87e-16	79.0
MsG0280007840.01.T01	MTR_5g094430	50.427	117	52	1	89	199	323	439	1.19e-29	118
MsG0280007840.01.T01	MTR_5g094430	58.730	63	25	1	124	186	200	261	3.99e-16	79.0
MsG0280007840.01.T01	MTR_8g092140	67.568	74	23	1	108	180	143	216	1.36e-29	112
MsG0280007840.01.T01	MTR_5g042920	50.000	106	53	0	79	184	275	380	2.26e-29	116
MsG0280007840.01.T01	MTR_5g042920	60.000	60	23	1	124	183	151	209	4.10e-16	78.6
MsG0280007840.01.T01	MTR_3g009470	52.381	105	49	1	82	185	452	556	8.70e-29	116
MsG0280007840.01.T01	MTR_3g009470	57.812	64	26	1	124	187	280	342	1.32e-17	83.6
MsG0280007840.01.T01	MTR_3g056100	49.194	124	61	2	78	201	226	347	1.40e-28	114
MsG0280007840.01.T01	MTR_3g056100	59.375	64	25	1	124	187	99	161	3.56e-17	81.6
MsG0280007840.01.T01	MTR_3g056100	49.194	124	61	2	78	201	213	334	1.41e-28	114
MsG0280007840.01.T01	MTR_3g056100	59.375	64	25	1	124	187	99	161	3.97e-17	81.6
MsG0280007840.01.T01	MTR_8g096730	51.111	90	44	0	92	181	38	127	2.43e-28	107
MsG0280007840.01.T01	MTR_3g056100	49.194	124	61	2	78	201	357	478	2.45e-28	114
MsG0280007840.01.T01	MTR_3g056100	59.375	64	25	1	124	187	243	305	4.81e-17	81.6
MsG0280007840.01.T01	MTR_3g056100	49.194	124	61	2	78	201	370	491	2.96e-28	114
MsG0280007840.01.T01	MTR_3g056100	59.375	64	25	1	124	187	243	305	4.60e-17	81.6
MsG0280007840.01.T01	MTR_3g031220	63.636	77	28	0	108	184	349	425	4.97e-28	113
MsG0280007840.01.T01	MTR_3g031220	54.545	66	29	1	124	189	198	262	2.51e-16	79.3
MsG0280007840.01.T01	MTR_4g082580	46.957	115	52	1	80	185	225	339	4.16e-27	109
MsG0280007840.01.T01	MTR_4g082580	44.681	94	51	1	95	187	115	208	1.36e-17	82.8
MsG0280007840.01.T01	MTR_5g074400	48.276	116	48	1	70	185	378	481	5.38e-27	110
MsG0280007840.01.T01	MTR_5g074400	56.667	60	25	1	124	183	243	301	2.60e-15	76.6
MsG0280007840.01.T01	MTR_7g080020	43.382	136	68	2	59	185	419	554	8.84e-27	110
MsG0280007840.01.T01	MTR_7g080020	57.812	64	26	1	124	187	280	342	5.13e-17	81.6
MsG0280007840.01.T01	MTR_1g077780	39.007	141	72	3	77	205	4	142	3.05e-26	101
MsG0280007840.01.T01	MTR_7g071120	39.597	149	74	2	53	185	237	385	3.16e-26	108
MsG0280007840.01.T01	MTR_7g071120	53.333	75	31	2	124	198	166	236	1.17e-16	80.5
MsG0280007840.01.T01	MTR_7g080000	45.455	121	63	2	68	185	373	493	4.17e-26	108
MsG0280007840.01.T01	MTR_7g080000	55.385	65	28	1	123	187	233	296	3.57e-16	79.3
MsG0280007840.01.T01	MTR_4g013260	59.211	76	31	0	108	183	320	395	5.89e-26	107
MsG0280007840.01.T01	MTR_4g013260	53.247	77	34	1	124	198	184	260	7.16e-21	92.8
MsG0280007840.01.T01	MTR_4g132430	50.000	82	40	1	108	188	111	192	6.20e-24	100
MsG0280007840.01.T01	MTR_7g100510	35.882	170	91	4	22	191	277	428	7.39e-24	100
MsG0280007840.01.T01	MTR_7g100510	45.833	96	41	3	125	220	190	274	8.04e-17	80.9
MsG0280007840.01.T01	MTR_4g130900	42.982	114	65	0	74	187	309	422	1.05e-23	100
MsG0280007840.01.T01	MTR_4g132430	50.000	82	40	1	108	188	245	326	1.55e-23	100
MsG0280007840.01.T01	MTR_7g062220	68.421	57	18	0	124	180	124	180	6.67e-23	96.7
MsG0280007840.01.T01	MTR_2g105060	51.163	86	39	2	106	188	74	159	8.58e-23	94.7
MsG0280007840.01.T01	MTR_2g105060	51.163	86	39	2	106	188	149	234	1.68e-22	95.5
MsG0280007840.01.T01	MTR_3g053330	48.148	81	41	1	108	187	235	315	2.03e-22	97.1
MsG0280007840.01.T01	MTR_2g023930	40.000	135	72	4	58	183	231	365	2.69e-22	97.1
MsG0280007840.01.T01	MTR_5g029850	68.852	61	19	0	82	142	9	69	5.60e-22	87.8
MsG0280007840.01.T01	MTR_7g110720	40.152	132	60	4	72	202	151	264	7.44e-22	95.1
MsG0280007840.01.T01	MTR_7g110720	40.152	132	60	4	72	202	178	291	7.99e-22	95.1
MsG0280007840.01.T01	MTR_4g094412	51.282	78	37	1	108	184	227	304	1.14e-21	95.1
MsG0280007840.01.T01	MTR_4g094412	51.282	78	37	1	108	184	218	295	1.22e-21	95.1
MsG0280007840.01.T01	MTR_2g088000	49.351	77	38	1	108	183	333	409	1.65e-21	95.1
MsG0280007840.01.T01	MTR_7g009730	50.649	77	37	1	111	186	206	282	3.32e-21	94.0
MsG0280007840.01.T01	MTR_5g097490	55.696	79	34	1	109	187	237	314	3.86e-21	92.8
MsG0280007840.01.T01	MTR_5g097490	52.542	59	27	1	125	183	93	150	1.94e-12	67.4
MsG0280007840.01.T01	MTR_4g049790	36.029	136	75	2	111	245	299	423	7.36e-21	92.8
MsG0280007840.01.T01	MTR_4g007060	58.065	62	25	1	123	183	127	188	9.66e-21	90.1
MsG0280007840.01.T01	MTR_4g007060	58.065	62	25	1	123	183	161	222	1.41e-20	90.1
MsG0280007840.01.T01	MTR_4g107970	42.553	94	53	1	91	183	145	238	1.56e-20	92.0
MsG0280007840.01.T01	MTR_4g107970	42.553	94	53	1	91	183	222	315	2.64e-20	91.3
MsG0280007840.01.T01	MTR_7g109600	50.685	73	35	1	125	196	54	126	5.05e-20	87.8
MsG0280007840.01.T01	MTR_4g049760	47.436	78	40	1	111	187	277	354	5.64e-20	90.5
MsG0280007840.01.T01	MTR_2g045360	45.122	82	44	1	108	188	195	276	1.12e-19	89.0
MsG0280007840.01.T01	MTR_6g086555	44.444	81	44	1	110	189	192	272	1.35e-19	88.6
MsG0280007840.01.T01	MTR_3g106060	50.000	72	32	2	122	192	136	204	5.02e-19	85.5
MsG0280007840.01.T01	MTR_1g009613	42.683	82	46	1	100	180	238	319	5.60e-19	86.3
MsG0280007840.01.T01	MTR_5g016610	43.617	94	52	1	100	192	175	268	8.26e-19	84.7
MsG0280007840.01.T01	MTR_1g013760	47.297	74	34	2	112	180	124	197	1.75e-18	84.0
MsG0280007840.01.T01	MTR_3g108960	40.206	97	57	1	85	180	275	371	2.14e-18	85.1
MsG0280007840.01.T01	MTR_4g094908	42.553	94	53	1	100	192	242	335	2.34e-18	84.3
MsG0280007840.01.T01	MTR_1g078260	49.296	71	35	1	111	180	234	304	1.66e-17	82.8
MsG0280007840.01.T01	MTR_3g009470	57.812	64	26	1	124	187	280	342	1.77e-17	82.8
MsG0280007840.01.T01	MTR_3g009470	48.438	64	32	1	82	144	452	515	5.71e-11	63.5
MsG0280007840.01.T01	MTR_1g013790	51.613	62	29	1	123	183	100	161	4.57e-17	79.3
MsG0280007840.01.T01	MTR_4g127040	41.463	82	47	1	100	180	221	302	5.43e-17	80.1
MsG0280007840.01.T01	MTR_8g028565	51.667	60	28	1	125	183	156	215	1.24e-16	79.3
MsG0280007840.01.T01	MTR_3g031220	54.545	66	29	1	124	189	198	262	1.62e-16	79.3
MsG0280007840.01.T01	MTR_8g098945	50.000	62	30	1	123	183	128	189	4.41e-16	77.0
MsG0280007840.01.T01	MTR_2g032030	51.667	60	28	1	125	183	268	327	6.89e-16	78.2
MsG0280007840.01.T01	MTR_2g032030	51.667	60	28	1	125	183	268	327	8.09e-16	77.8
MsG0280007840.01.T01	MTR_0117s0040	37.069	116	71	2	70	184	21	135	1.24e-15	75.5
MsG0280007840.01.T01	MTR_5g097500	45.333	75	41	0	109	183	215	289	2.57e-15	75.5
MsG0280007840.01.T01	MTR_8g087000	46.774	62	32	1	125	185	77	138	5.00e-15	73.6
MsG0280007840.01.T01	MTR_8g087000	46.774	62	32	1	125	185	78	139	5.27e-15	73.6
MsG0280007840.01.T01	MTR_7g079040	48.333	60	30	1	125	183	155	214	5.94e-15	74.3
MsG0280007840.01.T01	MTR_2g024350	45.312	64	34	1	125	187	9	72	7.79e-15	72.8
MsG0280007840.01.T01	MTR_2g024380	41.463	82	46	2	104	183	230	311	1.07e-14	74.3
MsG0280007840.01.T01	MTR_1g070455	50.877	57	27	1	125	180	294	350	1.16e-14	73.9
MsG0280007840.01.T01	MTR_4g047580	32.800	125	72	3	111	234	268	381	2.37e-14	73.6
MsG0280007840.01.T01	MTR_1g099600	39.080	87	48	3	99	183	162	245	2.48e-14	72.4
MsG0280007840.01.T01	MTR_8g069935	37.500	96	58	2	98	191	304	399	3.31e-14	73.2
MsG0280007840.01.T01	MTR_2g016770	46.667	60	31	1	125	183	28	87	3.59e-14	70.5
MsG0280007840.01.T01	MTR_2g016770	46.667	60	31	1	125	183	36	95	3.71e-14	70.5
MsG0280007840.01.T01	MTR_2g075680	35.811	148	71	5	87	225	108	240	4.93e-14	71.6
MsG0280007840.01.T01	MTR_8g099350	39.604	101	57	2	82	179	91	190	5.54e-14	72.0
MsG0280007840.01.T01	MTR_5g074200	49.206	63	31	1	124	186	220	281	1.29e-13	70.5
MsG0280007840.01.T01	MTR_3g090860	51.667	60	26	1	123	179	132	191	1.40e-13	70.5
MsG0280007840.01.T01	MTR_2g083870	35.644	101	58	2	90	183	40	140	1.43e-13	69.7
MsG0280007840.01.T01	MTR_8g067650	37.778	90	54	2	100	187	314	403	2.50e-13	70.5
MsG0280007840.01.T01	MTR_5g067680	37.190	121	62	4	83	190	158	277	3.32e-13	69.7
MsG0280007840.01.T01	MTR_3g095080	52.941	68	26	1	85	146	123	190	4.64e-13	67.0
MsG0280007840.01.T01	MTR_8g067635	46.154	65	34	1	124	187	349	413	4.72e-13	69.7
MsG0280007840.01.T01	MTR_2g075700	38.053	113	58	3	87	190	104	213	6.85e-13	68.2
MsG0280007840.01.T01	MTR_7g117200	50.000	60	27	1	123	179	117	176	7.52e-13	68.2
MsG0280007840.01.T01	MTR_8g027860	34.615	104	65	1	88	188	100	203	7.96e-13	68.6
MsG0280007840.01.T01	MTR_3g093830	29.947	187	117	5	30	209	35	214	3.32e-12	66.2
MsG0280007840.01.T01	MTR_2g075610	45.763	59	29	1	123	178	28	86	1.10e-11	63.2
MsG0280007840.01.T01	MTR_2g075750	45.000	60	30	1	123	179	27	86	1.10e-11	62.8
MsG0280007840.01.T01	MTR_7g073430	47.458	59	28	1	124	179	122	180	1.39e-11	64.3
MsG0280007840.01.T01	MTR_8g005750	33.083	133	72	5	83	212	63	181	1.94e-11	63.9
MsG0280007840.01.T01	MTR_8g032510	36.170	94	53	2	124	214	119	208	5.21e-11	62.4
MsG0280007840.01.T01	MTR_5g018380	44.068	59	31	1	123	181	122	178	6.31e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007840.01.T01	AT2G47260	51.172	256	102	7	44	293	99	337	3.60e-57	187
MsG0280007840.01.T01	AT5G49520	51.185	211	67	6	93	287	190	380	3.47e-50	171
MsG0280007840.01.T01	AT1G69310	70.874	103	30	0	97	199	120	222	5.52e-46	157
MsG0280007840.01.T01	AT1G69310	70.874	103	30	0	97	199	120	222	5.52e-46	157
MsG0280007840.01.T01	AT1G69310	70.874	103	30	0	97	199	120	222	5.52e-46	157
MsG0280007840.01.T01	AT4G18170	46.269	201	92	4	39	224	72	271	1.65e-45	157
MsG0280007840.01.T01	AT1G29860	47.573	206	80	5	84	287	94	273	5.75e-43	149
MsG0280007840.01.T01	AT1G69310	66.990	103	30	1	97	199	120	218	2.63e-40	142
MsG0280007840.01.T01	AT3G62340	41.919	198	78	5	102	287	96	268	8.79e-39	138
MsG0280007840.01.T01	AT5G46350	53.030	132	60	1	56	187	117	246	3.46e-38	137
MsG0280007840.01.T01	AT2G44745	63.830	94	33	1	97	189	118	211	2.27e-35	127
MsG0280007840.01.T01	AT2G46130	61.538	91	35	0	105	195	11	101	2.16e-34	121
MsG0280007840.01.T01	AT4G39410	61.682	107	35	3	97	198	195	300	4.58e-34	126
MsG0280007840.01.T01	AT5G13080	70.423	71	21	0	111	181	54	124	2.77e-32	117
MsG0280007840.01.T01	AT3G01970	61.905	84	29	1	111	194	52	132	5.80e-31	114
MsG0280007840.01.T01	AT1G13960	66.667	75	25	0	109	183	241	315	4.18e-30	117
MsG0280007840.01.T01	AT1G13960	57.812	64	26	1	124	187	76	138	1.05e-17	82.8
MsG0280007840.01.T01	AT2G03340	53.398	103	48	0	82	184	373	475	5.32e-30	119
MsG0280007840.01.T01	AT2G03340	61.667	60	22	1	124	183	250	308	2.65e-17	82.4
MsG0280007840.01.T01	AT1G13960	44.444	135	62	1	62	183	334	468	5.47e-30	119
MsG0280007840.01.T01	AT1G13960	57.812	64	26	1	124	187	229	291	1.36e-17	83.2
MsG0280007840.01.T01	AT5G41570	59.259	81	33	0	102	182	76	156	6.24e-29	109
MsG0280007840.01.T01	AT2G46130	57.143	91	35	1	105	195	11	97	6.78e-29	107
MsG0280007840.01.T01	AT5G26170	65.278	72	25	0	111	182	100	171	1.42e-28	108
MsG0280007840.01.T01	AT5G07100	47.863	117	57	2	78	193	98	211	1.70e-28	109
MsG0280007840.01.T01	AT5G07100	50.000	64	32	0	124	187	24	87	1.55e-15	74.3
MsG0280007840.01.T01	AT5G07100	47.863	117	57	2	78	193	98	211	1.70e-28	109
MsG0280007840.01.T01	AT5G07100	50.000	64	32	0	124	187	24	87	1.55e-15	74.3
MsG0280007840.01.T01	AT5G07100	47.863	117	57	2	78	193	98	211	1.70e-28	109
MsG0280007840.01.T01	AT5G07100	50.000	64	32	0	124	187	24	87	1.55e-15	74.3
MsG0280007840.01.T01	AT5G07100	47.863	117	57	2	78	193	98	211	1.70e-28	109
MsG0280007840.01.T01	AT5G07100	50.000	64	32	0	124	187	24	87	1.55e-15	74.3
MsG0280007840.01.T01	AT1G64000	59.036	83	34	0	100	182	90	172	2.31e-28	108
MsG0280007840.01.T01	AT2G38470	46.094	128	57	2	105	220	343	470	3.01e-28	114
MsG0280007840.01.T01	AT2G38470	56.667	60	25	1	124	183	184	242	9.02e-15	74.7
MsG0280007840.01.T01	AT3G01080	65.333	75	26	0	109	183	291	365	4.01e-28	112
MsG0280007840.01.T01	AT3G01080	57.812	64	26	1	124	187	167	229	3.01e-17	82.0
MsG0280007840.01.T01	AT3G01080	65.333	75	26	0	109	183	329	403	5.03e-28	112
MsG0280007840.01.T01	AT3G01080	57.812	64	26	1	124	187	205	267	3.50e-17	82.0
MsG0280007840.01.T01	AT5G07100	47.009	117	58	2	78	193	191	304	5.34e-28	110
MsG0280007840.01.T01	AT5G07100	50.000	64	32	0	124	187	117	180	2.86e-15	75.1
MsG0280007840.01.T01	AT5G64810	54.217	83	38	0	100	182	86	168	1.11e-27	106
MsG0280007840.01.T01	AT4G26440	49.057	106	54	0	80	185	328	433	3.14e-27	111
MsG0280007840.01.T01	AT4G26440	31.746	189	107	4	91	279	145	311	9.78e-17	80.9
MsG0280007840.01.T01	AT4G26640	61.538	78	30	0	108	185	189	266	3.63e-27	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	35	99	4.01e-17	81.3
MsG0280007840.01.T01	AT4G26640	61.538	78	30	0	108	185	189	266	3.63e-27	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	35	99	4.01e-17	81.3
MsG0280007840.01.T01	AT4G26640	61.538	78	30	0	108	185	189	266	3.63e-27	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	35	99	4.01e-17	81.3
MsG0280007840.01.T01	AT4G26640	61.538	78	30	0	108	185	189	266	3.63e-27	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	35	99	4.01e-17	81.3
MsG0280007840.01.T01	AT5G56270	62.821	78	29	0	108	185	471	548	4.54e-27	111
MsG0280007840.01.T01	AT5G56270	54.688	64	28	1	124	187	273	335	1.53e-15	77.4
MsG0280007840.01.T01	AT4G26640	60.494	81	32	0	105	185	290	370	9.68e-27	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	139	203	5.78e-17	81.3
MsG0280007840.01.T01	AT4G26640	60.494	81	32	0	105	185	322	402	1.07e-26	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	171	235	7.05e-17	81.3
MsG0280007840.01.T01	AT4G26640	60.494	81	32	0	105	185	362	442	1.34e-26	109
MsG0280007840.01.T01	AT4G26640	59.091	66	26	1	124	189	211	275	6.78e-17	81.3
MsG0280007840.01.T01	AT2G21900	48.315	89	43	1	100	185	82	170	3.18e-25	100
MsG0280007840.01.T01	AT2G30250	56.627	83	36	0	105	187	309	391	8.55e-25	103
MsG0280007840.01.T01	AT2G30250	53.623	69	30	2	124	191	166	233	1.39e-13	70.9
MsG0280007840.01.T01	AT2G04880	46.789	109	50	1	83	183	234	342	8.79e-25	103
MsG0280007840.01.T01	AT2G04880	37.168	113	70	1	123	235	110	221	2.32e-16	79.3
MsG0280007840.01.T01	AT2G04880	46.789	109	50	1	83	183	258	366	9.28e-25	103
MsG0280007840.01.T01	AT2G04880	37.209	129	69	4	123	251	110	226	3.32e-16	79.0
MsG0280007840.01.T01	AT4G04450	39.007	141	72	4	108	245	182	311	2.00e-23	99.8
MsG0280007840.01.T01	AT1G55600	57.534	73	31	0	111	183	294	366	2.33e-23	100
MsG0280007840.01.T01	AT4G04450	39.007	141	72	4	108	245	276	405	4.12e-23	99.4
MsG0280007840.01.T01	AT1G80840	45.545	101	49	3	87	184	110	207	1.63e-22	95.5
MsG0280007840.01.T01	AT2G37260	47.423	97	45	2	84	180	233	323	3.34e-22	95.5
MsG0280007840.01.T01	AT2G37260	53.125	64	29	1	125	188	84	146	1.23e-14	73.9
MsG0280007840.01.T01	AT2G37260	47.423	97	45	2	84	180	235	325	3.59e-22	95.1
MsG0280007840.01.T01	AT2G37260	53.125	64	29	1	125	188	86	148	1.19e-14	73.9
MsG0280007840.01.T01	AT1G62300	51.948	77	36	1	108	183	296	372	4.36e-22	96.7
MsG0280007840.01.T01	AT4G22070	51.948	77	36	1	108	183	281	357	4.54e-22	96.7
MsG0280007840.01.T01	AT4G22070	51.948	77	36	1	108	183	281	357	4.54e-22	96.7
MsG0280007840.01.T01	AT4G22070	51.948	77	36	1	108	183	281	357	4.54e-22	96.7
MsG0280007840.01.T01	AT4G22070	51.948	77	36	1	108	183	281	357	4.54e-22	96.7
MsG0280007840.01.T01	AT2G37260	47.423	97	45	2	84	180	315	405	4.77e-22	95.9
MsG0280007840.01.T01	AT2G37260	53.125	64	29	1	125	188	166	228	1.54e-14	73.9
MsG0280007840.01.T01	AT1G68150	39.496	119	55	3	108	225	219	321	1.69e-21	93.6
MsG0280007840.01.T01	AT1G18860	50.649	77	37	1	108	183	223	299	4.92e-21	93.6
MsG0280007840.01.T01	AT5G43290	64.912	57	20	0	124	180	114	170	1.38e-20	89.7
MsG0280007840.01.T01	AT4G01720	44.330	97	52	2	89	183	203	299	1.55e-20	92.0
MsG0280007840.01.T01	AT5G15130	45.238	84	45	1	104	186	165	248	3.56e-20	90.9
MsG0280007840.01.T01	AT5G15130	45.238	84	45	1	104	186	207	290	4.21e-20	90.9
MsG0280007840.01.T01	AT4G30935	45.977	87	40	1	98	184	312	391	2.09e-19	88.6
MsG0280007840.01.T01	AT4G30935	52.542	59	27	1	125	183	169	226	2.93e-11	64.3
MsG0280007840.01.T01	AT4G31800	53.846	65	29	1	123	186	110	174	4.78e-19	84.7
MsG0280007840.01.T01	AT2G25000	53.846	65	29	1	123	186	102	166	6.38e-19	84.0
MsG0280007840.01.T01	AT2G25000	53.846	65	29	1	123	186	102	166	6.38e-19	84.0
MsG0280007840.01.T01	AT4G31800	53.846	65	29	1	123	186	175	239	6.93e-19	85.5
MsG0280007840.01.T01	AT2G25000	53.846	65	29	1	123	186	124	188	1.02e-18	84.0
MsG0280007840.01.T01	AT2G25000	53.846	65	29	1	123	186	145	209	1.51e-18	84.0
MsG0280007840.01.T01	AT2G23320	46.341	82	43	1	100	180	216	297	2.53e-18	84.0
MsG0280007840.01.T01	AT1G29280	53.968	63	28	1	125	186	75	137	3.03e-18	82.8
MsG0280007840.01.T01	AT2G30590	36.697	109	65	2	77	181	263	371	3.38e-18	84.3
MsG0280007840.01.T01	AT4G31550	43.902	82	45	1	100	180	221	302	1.13e-17	82.4
MsG0280007840.01.T01	AT3G01080	57.812	64	26	1	124	187	205	267	2.15e-17	81.6
MsG0280007840.01.T01	AT2G24570	45.455	88	46	2	94	180	214	300	2.21e-17	81.3
MsG0280007840.01.T01	AT5G52830	45.882	85	40	3	100	183	146	225	2.79e-17	81.6
MsG0280007840.01.T01	AT4G31550	44.318	88	47	2	94	180	217	303	3.90e-17	80.9
MsG0280007840.01.T01	AT4G24240	36.290	124	77	2	58	180	216	338	8.07e-17	80.1
MsG0280007840.01.T01	AT5G45050	33.939	165	94	4	30	183	941	1101	9.91e-17	81.3
MsG0280007840.01.T01	AT5G45050	33.939	165	94	4	30	183	1080	1240	1.22e-16	80.9
MsG0280007840.01.T01	AT5G45050	33.939	165	94	4	30	183	1052	1212	1.28e-16	80.9
MsG0280007840.01.T01	AT1G69810	44.872	78	41	2	108	183	187	264	2.74e-16	79.0
MsG0280007840.01.T01	AT1G69810	44.872	78	41	2	108	183	129	206	2.76e-16	78.6
MsG0280007840.01.T01	AT3G04670	41.463	82	47	1	100	180	238	319	2.98e-16	78.2
MsG0280007840.01.T01	AT1G30650	53.333	60	27	1	125	183	218	277	4.45e-16	78.6
MsG0280007840.01.T01	AT5G28650	40.244	82	48	1	100	180	238	319	5.31e-16	77.4
MsG0280007840.01.T01	AT3G58710	30.000	210	108	7	116	301	62	256	6.23e-16	76.6
MsG0280007840.01.T01	AT3G58710	30.000	210	108	7	116	301	63	257	7.24e-16	76.6
MsG0280007840.01.T01	AT2G34830	51.667	60	28	1	125	183	216	275	9.61e-16	77.4
MsG0280007840.01.T01	AT2G34830	51.667	60	28	1	125	183	225	284	9.70e-16	77.4
MsG0280007840.01.T01	AT4G01250	50.000	60	29	1	125	183	129	188	1.18e-15	76.3
MsG0280007840.01.T01	AT5G45260	37.143	140	81	4	56	191	1141	1277	2.07e-15	77.4
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.41e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	1.95e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.41e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	1.95e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.50e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.06e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.55e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.11e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.55e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.11e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.57e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.10e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.59e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	1.97e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.64e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.06e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	548	661	2.65e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.09e-12	68.2
MsG0280007840.01.T01	AT4G12020	37.931	116	58	3	41	144	548	661	2.65e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	466	526	2.78e-12	67.8
MsG0280007840.01.T01	AT4G12020	37.931	116	58	2	41	144	481	594	2.88e-14	73.9
MsG0280007840.01.T01	AT4G12020	48.387	62	31	1	122	183	399	459	2.11e-12	68.2
MsG0280007840.01.T01	AT1G66600	33.582	134	83	3	52	179	28	161	3.43e-14	71.2
MsG0280007840.01.T01	AT1G66560	47.692	65	31	1	124	185	103	167	5.83e-14	70.9
MsG0280007840.01.T01	AT2G46400	36.449	107	60	2	76	179	61	162	6.61e-14	71.2
MsG0280007840.01.T01	AT4G23810	46.479	71	35	1	124	191	158	228	1.68e-13	70.5
MsG0280007840.01.T01	AT4G23550	45.455	66	35	1	119	183	135	200	2.73e-13	69.7
MsG0280007840.01.T01	AT4G11070	34.959	123	59	4	72	179	51	167	3.41e-13	68.9
MsG0280007840.01.T01	AT4G11070	34.959	123	59	4	72	179	83	199	4.79e-13	68.9
MsG0280007840.01.T01	AT2G40740	29.861	144	72	5	99	213	144	287	9.62e-13	67.8
MsG0280007840.01.T01	AT2G40740	29.861	144	72	5	99	213	153	296	9.79e-13	67.8
MsG0280007840.01.T01	AT1G80590	45.588	68	34	1	125	189	86	153	1.61e-12	66.2
MsG0280007840.01.T01	AT5G24110	36.275	102	50	4	86	179	77	171	2.76e-12	66.6
MsG0280007840.01.T01	AT3G56400	34.343	99	62	1	84	179	80	178	3.91e-12	65.9
MsG0280007840.01.T01	AT2G40750	49.153	59	27	1	124	179	152	210	9.61e-12	65.1
MsG0280007840.01.T01	AT1G66550	47.458	59	28	1	124	179	103	161	2.50e-11	63.2
MsG0280007840.01.T01	AT1G66550	47.458	59	28	1	124	179	108	166	2.85e-11	63.2

Find 60 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTGTCATGAAAGCAAATC+TGG	0.203637	2:+21623799	None:intergenic
GGGATTAATCATCGAGGTTT+TGG	0.240176	2:-21623168	MsG0280007840.01.T01:CDS
GAGGCTTTGTTAAGAGATAA+TGG	0.260189	2:-21623126	MsG0280007840.01.T01:CDS
GGCTATAGGTGGCGTAAATA+TGG	0.275141	2:-21623752	MsG0280007840.01.T01:CDS
TAGCTTCGGTGCTGCTGCTT+CGG	0.290732	2:-21623355	MsG0280007840.01.T01:CDS
TCTTAGTCTTGTCTTGATCT+TGG	0.299773	2:+21624317	None:intergenic
AGCTTCGGTGCTGCTGCTTC+GGG	0.319153	2:-21623354	MsG0280007840.01.T01:CDS
TTTACCTCTATGCTGTTCTA+AGG	0.320002	2:+21624375	None:intergenic
AGTAGTAATATTATTACTAA+TGG	0.370366	2:+21623281	None:intergenic
TTCAATACCTCGGATGAATC+CGG	0.413732	2:+21624463	None:intergenic
AGGCTTTGTTAAGAGATAAT+GGG	0.416894	2:-21623125	MsG0280007840.01.T01:CDS
TGTTGTTGTTGATGTAATCA+TGG	0.426264	2:+21624579	None:intergenic
ATCTTCAGGGTTTGTTAATG+AGG	0.433650	2:-21623145	MsG0280007840.01.T01:CDS
TATGTTAACACGTCGAGGTT+TGG	0.438478	2:-21623210	MsG0280007840.01.T01:CDS
GAAGAAATCGAACAAGAATT+CGG	0.447286	2:+21624427	None:intergenic
CCTTCTTCTAGTTATGTTGG+TGG	0.451903	2:-21623246	MsG0280007840.01.T01:CDS
AACCTCGATGATTAATCCCT+TGG	0.473918	2:+21623172	None:intergenic
GCAGCAGCACCGAAGCTAGT+AGG	0.480139	2:+21623360	None:intergenic
ATGTGTATGTACCTGGGAAA+AGG	0.480385	2:+21623707	None:intergenic
TGGTGAACCAAGCTGAGGTT+AGG	0.480823	2:+21623384	None:intergenic
GTTCACCAACCTACTAGCTT+CGG	0.509728	2:-21623369	MsG0280007840.01.T01:CDS
TTATTATTGTACAACAATGT+TGG	0.511800	2:+21623309	None:intergenic
AGGTTAGGACGTGACGTGGC+AGG	0.517051	2:+21623399	None:intergenic
GTTGTTGTCGTCGTGACGGT+GGG	0.521198	2:+21624530	None:intergenic
CCATCACACTCTTTCGTCAC+CGG	0.521634	2:-21624500	MsG0280007840.01.T01:CDS
AGTTATGTTGGTGGTTCTAG+TGG	0.524071	2:-21623237	MsG0280007840.01.T01:CDS
TTTGTCATGAAAGCAAATCT+GGG	0.531240	2:+21623800	None:intergenic
GAAGTTGATCACTTAGATGA+TGG	0.532713	2:-21623773	MsG0280007840.01.T01:CDS
TGTTGTTGTCGTCGTGACGG+TGG	0.534100	2:+21624529	None:intergenic
ATCACTTAGATGATGGCTAT+AGG	0.537567	2:-21623766	MsG0280007840.01.T01:CDS
CCACCAACATAACTAGAAGA+AGG	0.538338	2:+21623246	None:intergenic
GGACGTGACGTGGCAGGAGA+AGG	0.541957	2:+21623405	None:intergenic
TCAATACCTCGGATGAATCC+GGG	0.548808	2:+21624464	None:intergenic
ACCGGTGAGTTCTAACATCC+CGG	0.555255	2:-21624482	MsG0280007840.01.T01:CDS
CACCAACATAACTAGAAGAA+GGG	0.557197	2:+21623247	None:intergenic
GACGACAATTGAAGAATCAT+CGG	0.560070	2:+21623455	None:intergenic
GTTAACACGTCGAGGTTTGG+TGG	0.560475	2:-21623207	MsG0280007840.01.T01:CDS
TTCCTCGTCTAATGAAGCAA+CGG	0.560515	2:-21624407	MsG0280007840.01.T01:CDS
ACCAACATAACTAGAAGAAG+GGG	0.561388	2:+21623248	None:intergenic
GTTGTTGTTGATGTAATCAT+GGG	0.562636	2:+21624580	None:intergenic
GAACAAGAATTCGGTGACAC+CGG	0.578343	2:+21624436	None:intergenic
GTCACGTCCTAACCTCAGCT+TGG	0.584476	2:-21623391	MsG0280007840.01.T01:CDS
AATTGTCGTCACTACTTACG+AGG	0.589893	2:-21623442	MsG0280007840.01.T01:CDS
TCCGGGATGTTAGAACTCAC+CGG	0.608361	2:+21624481	None:intergenic
CACCGGAGTGTTCAATACCT+CGG	0.611727	2:+21624453	None:intergenic
CAGCACCGAAGCTAGTAGGT+TGG	0.627050	2:+21623364	None:intergenic
CGTTGTACAACGGCAAGTTG+CGG	0.640509	2:-21623504	MsG0280007840.01.T01:CDS
AACACCTTAGAACAGCATAG+AGG	0.642711	2:-21624379	MsG0280007840.01.T01:CDS
AACCGTTGCTTCATTAGACG+AGG	0.647141	2:+21624405	None:intergenic
GTAGTTATGTTAACACGTCG+AGG	0.660908	2:-21623215	MsG0280007840.01.T01:CDS
GCTGAGGTTAGGACGTGACG+TGG	0.673834	2:+21623395	None:intergenic
TAACATCCCGGATTCATCCG+AGG	0.676510	2:-21624470	MsG0280007840.01.T01:CDS
ATCCGAGGTATTGAACACTC+CGG	0.680816	2:-21624455	MsG0280007840.01.T01:CDS
ACTTAGATGATGGCTATAGG+TGG	0.681297	2:-21623763	MsG0280007840.01.T01:CDS
TAGGTTGGTGAACCAAGCTG+AGG	0.686519	2:+21623379	None:intergenic
GAGCTACTATCGTTGTACAA+CGG	0.728393	2:-21623514	MsG0280007840.01.T01:CDS
ATTGTCGTCACTACTTACGA+GGG	0.730012	2:-21623441	MsG0280007840.01.T01:CDS
GACCAAGGGATTAATCATCG+AGG	0.748189	2:-21623174	MsG0280007840.01.T01:CDS
CCAACATAACTAGAAGAAGG+GGG	0.750249	2:+21623249	None:intergenic
CCGGTGACGAAAGAGTGTGA+TGG	0.776237	2:+21624500	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACTAAATAAAATAGAAATAA+GGG	-	Chr2:21623607-21623626	MsG0280007840.01.T01:intron	10.0%
!!	TACTAAATAAAATAGAAATA+AGG	-	Chr2:21623606-21623625	MsG0280007840.01.T01:intron	10.0%
!!!	TTCACTAATTAATTTAATTT+GGG	-	Chr2:21624026-21624045	MsG0280007840.01.T01:intron	10.0%
!!	AGCATAATTATACTAATTAA+TGG	-	Chr2:21623751-21623770	MsG0280007840.01.T01:CDS	15.0%
!!	AGTAGTAATATTATTACTAA+TGG	+	Chr2:21624361-21624380	None:intergenic	15.0%
!!	GTTCACTAATTAATTTAATT+TGG	-	Chr2:21624025-21624044	MsG0280007840.01.T01:intron	15.0%
!!!	ATAATATAATTTTTGACTTG+TGG	-	Chr2:21624067-21624086	MsG0280007840.01.T01:intron	15.0%
!!!	TAATATAATTTTTGACTTGT+GGG	-	Chr2:21624068-21624087	MsG0280007840.01.T01:intron	15.0%
!!	AAAGAAAAAGAACCAAAAAA+AGG	-	Chr2:21623808-21623827	MsG0280007840.01.T01:CDS	20.0%
!!	AAGAAAATTGAGAAATGAAA+TGG	+	Chr2:21623974-21623993	None:intergenic	20.0%
!!	TTATTATTGTACAACAATGT+TGG	+	Chr2:21624333-21624352	None:intergenic	20.0%
!!!	CAACAACACTTTTTTATTAT+CGG	-	Chr2:21623078-21623097	MsG0280007840.01.T01:CDS	20.0%
!!!	TTTTTTTGGTTCTTTTTCTT+TGG	+	Chr2:21623809-21623828	None:intergenic	20.0%
!!!	ACACTTTTTTATTATCGGAT+TGG	-	Chr2:21623083-21623102	MsG0280007840.01.T01:CDS	25.0%
!!!	CACTTTTTTATTATCGGATT+GGG	-	Chr2:21623084-21623103	MsG0280007840.01.T01:CDS	25.0%
	AAAAATGAAGCAGAGTTAGA+AGG	-	Chr2:21623293-21623312	MsG0280007840.01.T01:CDS	30.0%
	AAGATTATGTGTATGTACCT+GGG	+	Chr2:21623941-21623960	None:intergenic	30.0%
	ACTACTACACTGTTTATTGT+AGG	+	Chr2:21624007-21624026	None:intergenic	30.0%
	GAAGAAATCGAACAAGAATT+CGG	+	Chr2:21623215-21623234	None:intergenic	30.0%
	TAAGATTATGTGTATGTACC+TGG	+	Chr2:21623942-21623961	None:intergenic	30.0%
	TTTGTCATGAAAGCAAATCT+GGG	+	Chr2:21623842-21623861	None:intergenic	30.0%
!!	AGGCTTTGTTAAGAGATAAT+GGG	-	Chr2:21624514-21624533	MsG0280007840.01.T01:CDS	30.0%
	ACCAACATAACTAGAAGAAG+GGG	+	Chr2:21624394-21624413	None:intergenic	35.0%
	CACCAACATAACTAGAAGAA+GGG	+	Chr2:21624395-21624414	None:intergenic	35.0%
	CTTTGTCATGAAAGCAAATC+TGG	+	Chr2:21623843-21623862	None:intergenic	35.0%
	GACGACAATTGAAGAATCAT+CGG	+	Chr2:21624187-21624206	None:intergenic	35.0%
	TTTACCTCTATGCTGTTCTA+AGG	+	Chr2:21623267-21623286	None:intergenic	35.0%
!	ATCACTTAGATGATGGCTAT+AGG	-	Chr2:21623873-21623892	MsG0280007840.01.T01:intron	35.0%
!	GAAGTTGATCACTTAGATGA+TGG	-	Chr2:21623866-21623885	MsG0280007840.01.T01:intron	35.0%
!!	ATCTTCAGGGTTTGTTAATG+AGG	-	Chr2:21624494-21624513	MsG0280007840.01.T01:CDS	35.0%
!!	GACTGTTTTTCACAGCTTTT+TGG	+	Chr2:21623913-21623932	None:intergenic	35.0%
!!	GAGGCTTTGTTAAGAGATAA+TGG	-	Chr2:21624513-21624532	MsG0280007840.01.T01:CDS	35.0%
!!	TCTTAGTCTTGTCTTGATCT+TGG	+	Chr2:21623325-21623344	None:intergenic	35.0%
!!!	TGGGTTCTCTTTCCTTTTTT+TGG	+	Chr2:21623823-21623842	None:intergenic	35.0%
	AACACCTTAGAACAGCATAG+AGG	-	Chr2:21623260-21623279	MsG0280007840.01.T01:CDS	40.0%
	AACCTCGATGATTAATCCCT+TGG	+	Chr2:21624470-21624489	None:intergenic	40.0%
	AATTGTCGTCACTACTTACG+AGG	-	Chr2:21624197-21624216	MsG0280007840.01.T01:intron	40.0%
	ATAGCAACGACAAGAACAGA+AGG	+	Chr2:21623504-21623523	None:intergenic	40.0%
	ATGTGTATGTACCTGGGAAA+AGG	+	Chr2:21623935-21623954	None:intergenic	40.0%
	ATTGTCGTCACTACTTACGA+GGG	-	Chr2:21624198-21624217	MsG0280007840.01.T01:intron	40.0%
	CCAACATAACTAGAAGAAGG+GGG	+	Chr2:21624393-21624412	None:intergenic	40.0%
	CCACCAACATAACTAGAAGA+AGG	+	Chr2:21624396-21624415	None:intergenic	40.0%
	GAGCTACTATCGTTGTACAA+CGG	-	Chr2:21624125-21624144	MsG0280007840.01.T01:intron	40.0%
	GTAGTTATGTTAACACGTCG+AGG	-	Chr2:21624424-21624443	MsG0280007840.01.T01:CDS	40.0%
	TATGTTAACACGTCGAGGTT+TGG	-	Chr2:21624429-21624448	MsG0280007840.01.T01:CDS	40.0%
	TGTGGGACACGTAAATGTAA+CGG	-	Chr2:21624085-21624104	MsG0280007840.01.T01:intron	40.0%
	TTAAGAAAACGCGTGATGAG+TGG	-	Chr2:21623421-21623440	MsG0280007840.01.T01:CDS	40.0%
	TTCAATACCTCGGATGAATC+CGG	+	Chr2:21623179-21623198	None:intergenic	40.0%
	TTCCTCGTCTAATGAAGCAA+CGG	-	Chr2:21623232-21623251	MsG0280007840.01.T01:CDS	40.0%
!	AACGGCGTTGAAACAAAAAC+AGG	-	Chr2:21624103-21624122	MsG0280007840.01.T01:intron	40.0%
!	ACTTAGATGATGGCTATAGG+TGG	-	Chr2:21623876-21623895	MsG0280007840.01.T01:intron	40.0%
!	CCTTCTTCTAGTTATGTTGG+TGG	-	Chr2:21624393-21624412	MsG0280007840.01.T01:CDS	40.0%
!	GGGATTAATCATCGAGGTTT+TGG	-	Chr2:21624471-21624490	MsG0280007840.01.T01:CDS	40.0%
!	TGAAAAACAGTCCTTTTCCC+AGG	-	Chr2:21623921-21623940	MsG0280007840.01.T01:intron	40.0%
!!	AGTTATGTTGGTGGTTCTAG+TGG	-	Chr2:21624402-21624421	MsG0280007840.01.T01:CDS	40.0%
!!!	ATCGAGGTTTTGGATCTTCA+GGG	-	Chr2:21624481-21624500	MsG0280007840.01.T01:CDS	40.0%
!!!	GTGGTTTTGTGAATGACCAA+GGG	-	Chr2:21624451-21624470	MsG0280007840.01.T01:CDS	40.0%
!!!	TTTTGTTGTTGTCGTCGTGA+CGG	+	Chr2:21623116-21623135	None:intergenic	40.0%
	AACCGTTGCTTCATTAGACG+AGG	+	Chr2:21623237-21623256	None:intergenic	45.0%
	GACCAAGGGATTAATCATCG+AGG	-	Chr2:21624465-21624484	MsG0280007840.01.T01:CDS	45.0%
	GGCTATAGGTGGCGTAAATA+TGG	-	Chr2:21623887-21623906	MsG0280007840.01.T01:intron	45.0%
	TCAATACCTCGGATGAATCC+GGG	+	Chr2:21623178-21623197	None:intergenic	45.0%
!	CCCCCTTCTTCTAGTTATGT+TGG	-	Chr2:21624390-21624409	MsG0280007840.01.T01:CDS	45.0%
!	GAACAAGAATTCGGTGACAC+CGG	+	Chr2:21623206-21623225	None:intergenic	45.0%
!	GTTCACCAACCTACTAGCTT+CGG	-	Chr2:21624270-21624289	MsG0280007840.01.T01:intron	45.0%
!!	ATCCGAGGTATTGAACACTC+CGG	-	Chr2:21623184-21623203	MsG0280007840.01.T01:CDS	45.0%
!!!	CATCGAGGTTTTGGATCTTC+AGG	-	Chr2:21624480-21624499	MsG0280007840.01.T01:CDS	45.0%
!!!	GGTGGTTTTGTGAATGACCA+AGG	-	Chr2:21624450-21624469	MsG0280007840.01.T01:CDS	45.0%
!!!	TTTTTAAAATTATTAATTCA+TGG	+	Chr2:21623362-21623381	None:intergenic	5.0%
	CCATCACACTCTTTCGTCAC+CGG	-	Chr2:21623139-21623158	MsG0280007840.01.T01:CDS	50.0%
	CGTTGTACAACGGCAAGTTG+CGG	-	Chr2:21624135-21624154	MsG0280007840.01.T01:intron	50.0%
	GTTAACACGTCGAGGTTTGG+TGG	-	Chr2:21624432-21624451	MsG0280007840.01.T01:CDS	50.0%
	TAACATCCCGGATTCATCCG+AGG	-	Chr2:21623169-21623188	MsG0280007840.01.T01:CDS	50.0%
	TCCGGGATGTTAGAACTCAC+CGG	+	Chr2:21623161-21623180	None:intergenic	50.0%
	TGGTGAACCAAGCTGAGGTT+AGG	+	Chr2:21624258-21624277	None:intergenic	50.0%
!	ACCGGTGAGTTCTAACATCC+CGG	-	Chr2:21623157-21623176	MsG0280007840.01.T01:CDS	50.0%
!	CACCGGAGTGTTCAATACCT+CGG	+	Chr2:21623189-21623208	None:intergenic	50.0%
!!	TAGGTTGGTGAACCAAGCTG+AGG	+	Chr2:21624263-21624282	None:intergenic	50.0%
	GTCACGTCCTAACCTCAGCT+TGG	-	Chr2:21624248-21624267	MsG0280007840.01.T01:intron	55.0%
	GTTGTTGTCGTCGTGACGGT+GGG	+	Chr2:21623112-21623131	None:intergenic	55.0%
	TGTTGTTGTCGTCGTGACGG+TGG	+	Chr2:21623113-21623132	None:intergenic	55.0%
!	CAGCACCGAAGCTAGTAGGT+TGG	+	Chr2:21624278-21624297	None:intergenic	55.0%
!	CCGGTGACGAAAGAGTGTGA+TGG	+	Chr2:21623142-21623161	None:intergenic	55.0%
!!	TAGCTTCGGTGCTGCTGCTT+CGG	-	Chr2:21624284-21624303	MsG0280007840.01.T01:intron	55.0%
	AGGTTAGGACGTGACGTGGC+AGG	+	Chr2:21624243-21624262	None:intergenic	60.0%
	GCTGAGGTTAGGACGTGACG+TGG	+	Chr2:21624247-21624266	None:intergenic	60.0%
!	GCAGCAGCACCGAAGCTAGT+AGG	+	Chr2:21624282-21624301	None:intergenic	60.0%
!	TTGCGGCGTGAAAAAGCGCG+TGG	-	Chr2:21624152-21624171	MsG0280007840.01.T01:intron	60.0%
!!	AGCTTCGGTGCTGCTGCTTC+GGG	-	Chr2:21624285-21624304	MsG0280007840.01.T01:intron	60.0%
	GGACGTGACGTGGCAGGAGA+AGG	+	Chr2:21624237-21624256	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	21623062	21624599	21623062	ID=MsG0280007840.01;Name=MsG0280007840.01
Chr2	mRNA	21623062	21624599	21623062	ID=MsG0280007840.01.T01;Parent=MsG0280007840.01;Name=MsG0280007840.01.T01;_AED=0.31;_eAED=0.36;_QI=0\|0\|0\|1\|1\|1\|3\|0\|301
Chr2	exon	21624313	21624599	21624313	ID=MsG0280007840.01.T01:exon:18186;Parent=MsG0280007840.01.T01
Chr2	exon	21623719	21623862	21623719	ID=MsG0280007840.01.T01:exon:18185;Parent=MsG0280007840.01.T01
Chr2	exon	21623062	21623536	21623062	ID=MsG0280007840.01.T01:exon:18184;Parent=MsG0280007840.01.T01
Chr2	CDS	21624313	21624599	21624313	ID=MsG0280007840.01.T01:cds;Parent=MsG0280007840.01.T01
Chr2	CDS	21623719	21623862	21623719	ID=MsG0280007840.01.T01:cds;Parent=MsG0280007840.01.T01
Chr2	CDS	21623062	21623536	21623062	ID=MsG0280007840.01.T01:cds;Parent=MsG0280007840.01.T01

Gene Sequence

>MsG0280007840.01.T01

ATGATTACATCAACAACAACAACACTTTTTTATTATCGGATTGGGTTCCCACCGTCACGACGACAACAACAAAACAACCATCACACTCTTTCGTCACCGGTGAGTTCTAACATCCCGGATTCATCCGAGGTATTGAACACTCCGGTGTCACCGAATTCTTGTTCGATTTCTTCCTCGTCTAATGAAGCAACGGTTAACAACACCTTAGAACAGCATAGAGGTAAACTTTCAAAAAATGAAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAATTGAAACCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCACTTAGATGATGGCTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCAATTGTCGTCACTACTTACGAGGGTCAACATACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTGGTTCACCAACCTACTAGCTTCGGTGCTGCTGCTTCGGGTTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATAATAACAACTCCATTAGTAATAATATTACTACTACTACTACACCCCCTTCTTCTAGTTATGTTGGTGGTTCTAGTGGTAGTTATGTTAACACGTCGAGGTTTGGTGGTTTTGTGAATGACCAAGGGATTAATCATCGAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAACAAGAAAAAGATTCAAGAAAAGAACAACATTAA

Protein sequence

>MsG0280007840.01.T01

MITSTTTTLFYYRIGFPPSRRQQQNNHHTLSSPVSSNIPDSSEVLNTPVSPNSCSISSSSNEATVNNTLEQHRGKLSKNEAELEGDDQDQDKTKKQLKPKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSLVHQPTSFGAAASGSHSHFLLPTLLYNNNNSISNNITTTTTPPSSSYVGGSSGSYVNTSRFGGFVNDQGINHRGFGSSGFVNEALLRDNGLLQDIIQMKKQEKDSRKEQH*