AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048754.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048754.01.T01 MTR_3g080810 98.193 498 9 0 1 498 1 498 0.0 1027
MsG0080048754.01.T01 MTR_8g104820 58.065 465 193 2 34 496 29 493 0.0 558
MsG0080048754.01.T01 MTR_3g010330 59.052 464 185 2 35 497 25 484 0.0 558
MsG0080048754.01.T01 MTR_3g117500 57.388 467 195 3 30 493 19 484 0.0 557
MsG0080048754.01.T01 MTR_1g088190 59.023 471 172 3 25 494 29 479 0.0 553
MsG0080048754.01.T01 MTR_4g035955 55.628 462 199 3 32 493 11 466 7.45e-177 512
MsG0080048754.01.T01 MTR_4g035930 53.595 459 207 3 35 493 15 467 6.14e-171 496
MsG0080048754.01.T01 MTR_5g009970 52.891 467 202 8 36 496 42 496 1.31e-170 497
MsG0080048754.01.T01 MTR_5g010000 53.863 466 201 7 35 496 40 495 2.23e-168 491
MsG0080048754.01.T01 MTR_4g035975 52.211 475 211 6 34 498 26 494 2.69e-166 486
MsG0080048754.01.T01 MTR_8g099410 49.787 470 225 7 34 495 27 493 4.87e-160 471
MsG0080048754.01.T01 MTR_8g099410 49.787 470 225 7 34 495 27 493 4.27e-159 472
MsG0080048754.01.T01 MTR_3g080190 48.276 493 238 9 10 493 21 505 9.76e-155 457
MsG0080048754.01.T01 MTR_5g009970 51.636 428 189 8 75 496 7 422 1.60e-149 440
MsG0080048754.01.T01 MTR_5g085730 46.263 495 249 10 9 493 9 496 3.87e-148 440
MsG0080048754.01.T01 MTR_1g037340 47.368 494 240 10 9 494 1 482 1.63e-145 432
MsG0080048754.01.T01 MTR_5g093590 44.807 491 249 8 11 491 20 498 4.19e-142 424
MsG0080048754.01.T01 MTR_4g074960 46.012 489 248 9 36 513 29 512 1.20e-140 424
MsG0080048754.01.T01 MTR_3g105230 43.243 481 256 8 6 483 3 469 4.78e-140 418
MsG0080048754.01.T01 MTR_5g009970 50.369 407 184 8 96 496 1 395 3.01e-136 405
MsG0080048754.01.T01 MTR_3g023740 43.802 484 257 7 11 491 6 477 1.40e-134 404
MsG0080048754.01.T01 MTR_3g113720 43.070 469 248 9 34 491 56 516 6.14e-121 370
MsG0080048754.01.T01 MTR_8g075990 43.803 468 244 10 35 491 63 522 8.54e-114 352
MsG0080048754.01.T01 MTR_1g088190 57.143 315 114 3 25 338 29 323 1.50e-111 340
MsG0080048754.01.T01 MTR_5g009970 50.296 338 153 6 163 496 1 327 1.02e-107 329
MsG0080048754.01.T01 MTR_2g028480 41.566 498 245 17 35 499 111 595 2.32e-100 320
MsG0080048754.01.T01 MTR_3g082440 39.381 485 253 17 35 490 116 588 4.60e-92 298
MsG0080048754.01.T01 MTR_3g090540 37.654 486 253 18 39 490 111 580 1.18e-87 286
MsG0080048754.01.T01 MTR_3g080800 78.698 169 17 1 497 665 66 215 4.54e-81 256
MsG0080048754.01.T01 MTR_7g108925 63.694 157 57 0 338 494 43 199 5.72e-67 219
MsG0080048754.01.T01 MTR_0393s0050 54.286 140 63 1 338 476 20 159 1.02e-45 160
MsG0080048754.01.T01 MTR_1g037320 47.853 163 80 3 96 256 1 160 1.40e-35 136
MsG0080048754.01.T01 MTR_1g037320 45.968 124 65 2 369 491 167 289 1.27e-30 122
MsG0080048754.01.T01 MTR_4g128810 39.869 153 88 2 339 490 181 330 4.01e-28 116
MsG0080048754.01.T01 MTR_1g060610 37.255 153 74 3 503 652 11 144 1.84e-19 85.9
MsG0080048754.01.T01 MTR_7g108920 42.553 94 51 2 244 336 86 177 3.27e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048754.01.T01 AT1G02800 60.600 500 186 4 1 494 5 499 0.0 610
MsG0080048754.01.T01 AT4G02290 63.124 461 169 1 34 494 51 510 0.0 610
MsG0080048754.01.T01 AT1G71380 58.025 486 198 2 13 498 4 483 0.0 565
MsG0080048754.01.T01 AT1G22880 59.322 472 188 1 27 498 16 483 0.0 556
MsG0080048754.01.T01 AT4G39010 54.379 491 221 2 9 496 3 493 0.0 555
MsG0080048754.01.T01 AT1G70710 56.989 465 199 1 34 498 27 490 0.0 550
MsG0080048754.01.T01 AT1G23210 54.032 496 220 2 1 496 1 488 0.0 548
MsG0080048754.01.T01 AT4G02290 60.902 399 155 1 96 494 1 398 4.50e-175 504
MsG0080048754.01.T01 AT4G39000 50.756 463 225 2 34 493 24 486 1.14e-169 494
MsG0080048754.01.T01 AT4G09740 52.479 484 212 7 11 491 4 472 4.40e-168 489
MsG0080048754.01.T01 AT4G23560 52.686 484 209 8 13 491 4 472 7.80e-166 484
MsG0080048754.01.T01 AT4G38990 50.740 473 223 4 33 496 21 492 1.04e-163 479
MsG0080048754.01.T01 AT1G22880 57.568 403 167 1 96 498 1 399 2.28e-162 472
MsG0080048754.01.T01 AT1G64390 48.637 477 234 7 30 498 20 493 2.79e-156 464
MsG0080048754.01.T01 AT4G11050 48.511 470 231 7 30 491 21 487 7.69e-154 456
MsG0080048754.01.T01 AT4G11050 48.511 470 231 7 30 491 21 487 2.05e-153 457
MsG0080048754.01.T01 AT4G11050 48.511 470 231 7 30 491 21 487 2.10e-153 457
MsG0080048754.01.T01 AT2G32990 49.142 466 226 7 35 491 39 502 1.86e-152 451
MsG0080048754.01.T01 AT2G44540 46.450 493 246 9 5 491 8 488 1.59e-142 425
MsG0080048754.01.T01 AT4G39010 52.208 385 181 2 9 390 3 387 1.96e-142 421
MsG0080048754.01.T01 AT2G44550 45.984 498 250 10 1 492 4 488 2.75e-142 424
MsG0080048754.01.T01 AT3G43860 48.043 460 224 7 35 491 34 481 2.37e-139 416
MsG0080048754.01.T01 AT3G43860 48.043 460 224 7 35 491 34 481 2.37e-139 416
MsG0080048754.01.T01 AT2G44570 48.707 464 222 10 36 491 34 489 7.22e-139 416
MsG0080048754.01.T01 AT1G19940 46.537 462 232 8 34 488 47 500 1.77e-133 402
MsG0080048754.01.T01 AT1G19940 46.537 462 232 8 34 488 47 500 1.77e-133 402
MsG0080048754.01.T01 AT2G44560 47.107 484 241 9 16 491 12 488 3.68e-133 400
MsG0080048754.01.T01 AT1G48930 47.198 464 234 7 36 491 31 491 2.05e-128 393
MsG0080048754.01.T01 AT1G75680 45.852 458 233 9 34 484 56 505 3.21e-125 381
MsG0080048754.01.T01 AT1G22880 60.577 312 119 1 27 338 16 323 1.07e-119 360
MsG0080048754.01.T01 AT4G38990 49.552 335 143 3 33 365 21 331 1.98e-101 313
MsG0080048754.01.T01 AT2G44570 45.767 378 190 9 36 406 34 403 2.22e-94 298
MsG0080048754.01.T01 AT5G49720 40.400 500 256 15 35 503 108 596 2.46e-94 304
MsG0080048754.01.T01 AT1G19940 44.658 365 191 7 34 391 47 407 6.25e-93 294
MsG0080048754.01.T01 AT1G65610 38.132 514 280 16 5 491 86 588 1.62e-92 300
MsG0080048754.01.T01 AT4G24260 39.165 503 258 16 36 504 109 597 1.15e-88 289
MsG0080048754.01.T01 AT1G32990 71.598 169 29 1 497 665 72 221 7.45e-75 240
MsG0080048754.01.T01 AT4G24260 36.923 390 202 15 36 391 109 488 3.06e-49 179
MsG0080048754.01.T01 AT4G24260 40.559 286 142 10 36 298 109 389 3.30e-47 173
MsG0080048754.01.T01 AT5G51610 46.154 169 33 2 497 665 71 181 7.04e-34 128
MsG0080048754.01.T01 AT4G35490 38.125 160 77 3 496 652 10 150 2.33e-22 94.4
MsG0080048754.01.T01 AT4G35490 38.125 160 77 3 496 652 10 150 2.33e-22 94.4

Find 160 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTCTCCATGTTAGTTTC+TGG 0.120345 contig423end:-7732 MsG0080048754.01.T01:intergenic
AGCAGGCACAGCGGCAAATA+TGG 0.212659 contig423end:+15729 MsG0080048754.01.T01:CDS
AAACAAGTTGATTACATATT+AGG 0.218178 contig423end:+9625 MsG0080048754.01.T01:CDS
GATGGCTGCTTGAAGCAATT+TGG 0.249537 contig423end:-8346 MsG0080048754.01.T01:intergenic
TTCAAAGGGTGTTAACATTA+TGG 0.250272 contig423end:+14032 MsG0080048754.01.T01:CDS
GTATTTAAATTTAAATATAA+TGG 0.252953 contig423end:-15936 MsG0080048754.01.T01:intergenic
ACCAGGATCTCCTGGTTTCC+AGG 0.265773 contig423end:+9028 MsG0080048754.01.T01:CDS
TCATGGATTTATAGAGCTTC+TGG 0.266197 contig423end:+8711 MsG0080048754.01.T01:CDS
CTAACATGGAGAGGAGATTC+TGG 0.269291 contig423end:+7739 MsG0080048754.01.T01:CDS
GCATGGAGTGTAATTGAATT+TGG 0.270088 contig423end:+7953 MsG0080048754.01.T01:CDS
GGATTTCAATACCTTCATTC+AGG 0.291114 contig423end:+9772 MsG0080048754.01.T01:CDS
CCTCTATGGTGAATATGTTT+TGG 0.294045 contig423end:-9697 MsG0080048754.01.T01:intergenic
ATGTCTTATATGGTTGGTTT+TGG 0.309145 contig423end:+9664 MsG0080048754.01.T01:CDS
CTGCATGAGCCTTGTATAAC+TGG 0.310887 contig423end:-8983 MsG0080048754.01.T01:intergenic
TAAATAGGATGAATTACTTT+GGG 0.315274 contig423end:+8683 MsG0080048754.01.T01:intron
CACTCCGCGCAACGTGTATA+AGG 0.320348 contig423end:+8224 MsG0080048754.01.T01:CDS
CCTAATCCAAATGTTCTTGT+TGG 0.322904 contig423end:+9799 MsG0080048754.01.T01:CDS
GGTATTGTGACAGGAATTCT+TGG 0.326998 contig423end:+8941 MsG0080048754.01.T01:intron
TCCAACAAAGATGTCTTATA+TGG 0.328912 contig423end:+9654 MsG0080048754.01.T01:CDS
ACCATATAAGACATCTTTGT+TGG 0.339582 contig423end:-9655 MsG0080048754.01.T01:intergenic
GCTGGTGACAACCTTAAGTT+TGG 0.341031 contig423end:+7899 MsG0080048754.01.T01:CDS
TGGAGCCGGTGTCGCCTTCC+CGG 0.342001 contig423end:-13989 MsG0080048754.01.T01:intergenic
CCACCGGTTGGACCGGCTCT+TGG 0.343636 contig423end:+14009 MsG0080048754.01.T01:CDS
CTGGTTGGACGGTAATCTTC+CGG 0.345606 contig423end:-7713 MsG0080048754.01.T01:intergenic
AAATCCATTCTCTTCTTTGA+AGG 0.355203 contig423end:+7682 MsG0080048754.01.T01:CDS
CCAGAGTAAGAGCAGTAAAA+TGG 0.357330 contig423end:-8540 MsG0080048754.01.T01:intergenic
GAGAAATTGTCACTGCTATC+AGG 0.366797 contig423end:-9838 MsG0080048754.01.T01:intergenic
ATGGCTCCAACAAGAACATT+TGG 0.372691 contig423end:-9805 MsG0080048754.01.T01:intergenic
CAGACACGTGTTCCAATACT+TGG 0.376150 contig423end:+14539 MsG0080048754.01.T01:intron
CCAACAAGAACATTTGGATT+AGG 0.379649 contig423end:-9799 MsG0080048754.01.T01:intergenic
GTTCTACTTCTTAAAGCTGC+TGG 0.386964 contig423end:+14271 MsG0080048754.01.T01:CDS
TACAACAATTGCTTCTGCTT+GGG 0.394575 contig423end:-15781 MsG0080048754.01.T01:intergenic
CAATCTAACGGTCACACATT+AGG 0.394793 contig423end:+8759 MsG0080048754.01.T01:CDS
TTGTTGTGTAGGGGTGGAAA+AGG 0.402114 contig423end:+15585 MsG0080048754.01.T01:intron
ATAAATAGGATGAATTACTT+TGG 0.403060 contig423end:+8682 MsG0080048754.01.T01:intron
GGCTGAGACGGCAGCTGCAT+TGG 0.410249 contig423end:+8278 MsG0080048754.01.T01:CDS
GGTGCATTAATATAAGTTGC+TGG 0.419720 contig423end:-9892 MsG0080048754.01.T01:intergenic
CCATCGGAAGCCCAAACTTA+AGG 0.422025 contig423end:-7910 MsG0080048754.01.T01:intergenic
TTCTGCTTGGGTTCAAGAAT+AGG 0.432814 contig423end:-15769 MsG0080048754.01.T01:intergenic
CAACAGATTTCTTGCAACAA+TGG 0.437940 contig423end:+9751 MsG0080048754.01.T01:CDS
CGCGGAGTGTCCATGTCCTC+AGG 0.440112 contig423end:-8210 MsG0080048754.01.T01:intergenic
CACACCAAGTACCAGCTTTG+TGG 0.444391 contig423end:-15981 MsG0080048754.01.T01:intergenic
ACCGGCTCCACCGGTTGGAC+CGG 0.445154 contig423end:+14002 MsG0080048754.01.T01:CDS
AGATTGTATAAATTGCTTGT+AGG 0.445898 contig423end:-8742 MsG0080048754.01.T01:intergenic
AATTGCTTCTGAGAAGTTGC+CGG 0.445935 contig423end:+15666 MsG0080048754.01.T01:CDS
TTCTTTGAAGGACAACGATC+CGG 0.446078 contig423end:+7694 MsG0080048754.01.T01:CDS
GCCGGTCCAACCGGTGGAGC+CGG 0.447208 contig423end:-14003 MsG0080048754.01.T01:intergenic
AACTAAAATCTTACTTTCAA+AGG 0.448333 contig423end:+8830 MsG0080048754.01.T01:CDS
TCCATTTGTGTTGAGATACT+TGG 0.453410 contig423end:-9542 MsG0080048754.01.T01:intergenic
TCTTTATTACCAGGATCTCC+TGG 0.454597 contig423end:+9020 MsG0080048754.01.T01:CDS
TTACAACAATTGCTTCTGCT+TGG 0.457628 contig423end:-15782 MsG0080048754.01.T01:intergenic
ATAAAGCTGGCTCTTGAAGC+CGG 0.458425 contig423end:+13970 MsG0080048754.01.T01:CDS
GTTCTTGTTGGAGCCATTGT+TGG 0.458699 contig423end:+9811 MsG0080048754.01.T01:CDS
TTGTCCTTCAAAGAAGAGAA+TGG 0.465104 contig423end:-7686 MsG0080048754.01.T01:intergenic
GAACCAAGAGCCGGTCCAAC+CGG 0.467333 contig423end:-14012 MsG0080048754.01.T01:intergenic
CTGAAGGTATGCCCAAGTAT+TGG 0.468858 contig423end:-14551 MsG0080048754.01.T01:intergenic
CAACACCTATGATCCATGTT+AGG 0.468912 contig423end:-8180 MsG0080048754.01.T01:intergenic
GCAGGCACAGCGGCAAATAT+GGG 0.470157 contig423end:+15730 MsG0080048754.01.T01:CDS
TGGACCGGCTCTTGGTTCAA+AGG 0.470221 contig423end:+14017 MsG0080048754.01.T01:CDS
GCCTGGAAACCAGGAGATCC+TGG 0.473013 contig423end:-9029 MsG0080048754.01.T01:intergenic
CTGGTGACAACCTTAAGTTT+GGG 0.477200 contig423end:+7900 MsG0080048754.01.T01:CDS
ACTTGGACATATAACGTGTC+TGG 0.483204 contig423end:-8061 MsG0080048754.01.T01:intergenic
ACAAAGATGTCTTATATGGT+TGG 0.486992 contig423end:+9658 MsG0080048754.01.T01:CDS
GCCAAGTATCTCAACACAAA+TGG 0.487846 contig423end:+9541 MsG0080048754.01.T01:CDS
AATTACTTTGGGGTGCATCA+TGG 0.489448 contig423end:+8694 MsG0080048754.01.T01:CDS
TCTCCATGTTAGTTTCTGGT+TGG 0.489620 contig423end:-7728 MsG0080048754.01.T01:intergenic
AGCAATTTGGAGGAATATGT+TGG 0.490359 contig423end:-8333 MsG0080048754.01.T01:intergenic
TGTTGTGTAGGGGTGGAAAA+GGG 0.492679 contig423end:+15586 MsG0080048754.01.T01:intron
AAGGTCTCGGCTCAAAATCC+AGG 0.493964 contig423end:+8243 MsG0080048754.01.T01:CDS
AAGCAAAGCTTAATTGATGA+TGG 0.494187 contig423end:-7627 MsG0080048754.01.T01:intergenic
AAAGCAAGAGCACCAACAAA+AGG 0.496484 contig423end:-9913 MsG0080048754.01.T01:intergenic
TCAGCCACAAAGCTGGTACT+TGG 0.497555 contig423end:+15977 MsG0080048754.01.T01:three_prime_UTR
CTGTTGAGGCTGCGCACGAA+TGG 0.497600 contig423end:-9734 MsG0080048754.01.T01:intergenic
GGACCGGCTCTTGGTTCAAA+GGG 0.498892 contig423end:+14018 MsG0080048754.01.T01:CDS
CATGTTAGTTTCTGGTTGGA+CGG 0.502097 contig423end:-7724 MsG0080048754.01.T01:intergenic
AGAGCAAAATCTCATAAAGT+TGG 0.506188 contig423end:+9597 MsG0080048754.01.T01:CDS
TTCTGATGTCGCGGCTGAGA+CGG 0.508344 contig423end:+8266 MsG0080048754.01.T01:CDS
TAACATGGATCATAGGTGTT+GGG 0.508347 contig423end:+8182 MsG0080048754.01.T01:CDS
GAGAGCCTAACATGGATCAT+AGG 0.511640 contig423end:+8175 MsG0080048754.01.T01:CDS
ATGGTCTCACAATTTAAGTC+CGG 0.511904 contig423end:-15685 MsG0080048754.01.T01:intergenic
CTTGTTGGAGCCATTGTTGG+TGG 0.513700 contig423end:+9814 MsG0080048754.01.T01:CDS
ATTAATATCAGCCACAAAGC+TGG 0.515910 contig423end:+15970 MsG0080048754.01.T01:three_prime_UTR
GTATAATGTGGTGGTAGAAG+TGG 0.517188 contig423end:-7566 MsG0080048754.01.T01:intergenic
TACATTTGTTCTTTATTACC+AGG 0.518164 contig423end:+9011 MsG0080048754.01.T01:CDS
TCGTGGTGGCGGCCTTGAGA+AGG 0.522834 contig423end:-8036 MsG0080048754.01.T01:intergenic
TAAAGCTGGCTCTTGAAGCC+GGG 0.523483 contig423end:+13971 MsG0080048754.01.T01:CDS
GAAGGCGACACCGGCTCCAC+CGG 0.524077 contig423end:+13993 MsG0080048754.01.T01:CDS
TGATGGTTACACCTTCAGTT+GGG 0.524285 contig423end:+8791 MsG0080048754.01.T01:CDS
AGCTGCTATCCGGTGGAGTA+CGG 0.525716 contig423end:+8009 MsG0080048754.01.T01:CDS
TCGGTTCAGGTGGACCTAGT+TGG 0.526135 contig423end:+7863 MsG0080048754.01.T01:intron
CGTGTCTGGAGTCGTGGTGG+CGG 0.527365 contig423end:-8047 MsG0080048754.01.T01:intergenic
ATGATGGTTACACCTTCAGT+TGG 0.531539 contig423end:+8790 MsG0080048754.01.T01:CDS
GTTGGAGGTTATTATGATGC+TGG 0.533900 contig423end:+7881 MsG0080048754.01.T01:CDS
TTAAGAAGTAGAACAGAAGC+AGG 0.535760 contig423end:-14262 MsG0080048754.01.T01:intergenic
TGAAGCCGGGAAGGCGACAC+CGG 0.536862 contig423end:+13984 MsG0080048754.01.T01:CDS
GACCTGGGGTATATTGAGCC+TGG 0.541463 contig423end:-9046 MsG0080048754.01.T01:intergenic
AGAAGAGGAACATACTTGGA+TGG 0.541611 contig423end:-8364 MsG0080048754.01.T01:intergenic
GGCTGCTTGAAGCAATTTGG+AGG 0.543025 contig423end:-8343 MsG0080048754.01.T01:intergenic
CACAAAGCTGGTACTTGGTG+TGG 0.544208 contig423end:+15982 MsG0080048754.01.T01:three_prime_UTR
CATCATAATAACCTCCAACT+AGG 0.545067 contig423end:-7877 MsG0080048754.01.T01:intergenic
ACAATGCTAGAGCTGCTATC+CGG 0.545376 contig423end:+7999 MsG0080048754.01.T01:CDS
TTGGGAAAGACCTGAGGACA+TGG 0.548137 contig423end:+8200 MsG0080048754.01.T01:CDS
CACTGTAAGAGCCTCTATAA+CGG 0.550722 contig423end:-8494 MsG0080048754.01.T01:intergenic
TGAAGAGTTCCAGTTATACA+AGG 0.550829 contig423end:+8974 MsG0080048754.01.T01:CDS
CCTTAAGTTTGGGCTTCCGA+TGG 0.551528 contig423end:+7910 MsG0080048754.01.T01:CDS
TTACTACTACATTATTGGCA+TGG 0.552356 contig423end:+7936 MsG0080048754.01.T01:CDS
ACGGTAAAGAAGAACCTCTA+TGG 0.554868 contig423end:-9711 MsG0080048754.01.T01:intergenic
GATTAGGTGAACCTGAATGA+AGG 0.555649 contig423end:-9783 MsG0080048754.01.T01:intergenic
ACATTAGGCGCTGACGATGA+TGG 0.559723 contig423end:+8774 MsG0080048754.01.T01:CDS
GTTCAGGTGGACCTAGTTGG+AGG 0.560989 contig423end:+7866 MsG0080048754.01.T01:intron
GTATATTGAGCCTGGAAACC+AGG 0.561641 contig423end:-9038 MsG0080048754.01.T01:intergenic
TGCTTGGGTTCAAGAATAGG+AGG 0.562010 contig423end:-15766 MsG0080048754.01.T01:intergenic
CCAAAACATATTCACCATAG+AGG 0.568991 contig423end:+9697 MsG0080048754.01.T01:CDS
GCGACACCGGCTCCACCGGT+TGG 0.574069 contig423end:+13997 MsG0080048754.01.T01:CDS
CTAACATGGATCATAGGTGT+TGG 0.574069 contig423end:+8181 MsG0080048754.01.T01:CDS
GCCTTACAACTATGTAGCAC+CGG 0.574081 contig423end:-14583 MsG0080048754.01.T01:intergenic
AGTGGTTGGAATCATAAAGC+TGG 0.577839 contig423end:+13957 MsG0080048754.01.T01:intron
AAAGGGTTCAAAAGACCCTA+AGG 0.579244 contig423end:+15603 MsG0080048754.01.T01:CDS
CCAAGAGCCGGTCCAACCGG+TGG 0.580423 contig423end:-14009 MsG0080048754.01.T01:intergenic
GAAGGTAGTCCGTACTCCAC+CGG 0.581503 contig423end:-8018 MsG0080048754.01.T01:intergenic
TTCCAGGCTCAATATACCCC+AGG 0.583174 contig423end:+9044 MsG0080048754.01.T01:CDS
ATATAACGTGTCTGGAGTCG+TGG 0.583323 contig423end:-8053 MsG0080048754.01.T01:intergenic
GGAGATTCTGGATTATCAGA+TGG 0.584707 contig423end:+7751 MsG0080048754.01.T01:CDS
GCTGGCTCTTGAAGCCGGGA+AGG 0.585779 contig423end:+13975 MsG0080048754.01.T01:CDS
GCGCAACGTGTATAAGGTCT+CGG 0.586725 contig423end:+8230 MsG0080048754.01.T01:CDS
GCAGGTTGGAGAGCCTAACA+TGG 0.595847 contig423end:+8167 MsG0080048754.01.T01:intron
ACACCCTTTGAACCAAGAGC+CGG 0.596971 contig423end:-14021 MsG0080048754.01.T01:intergenic
AATTCTCATAGCTGATTCGA+TGG 0.598811 contig423end:-15704 MsG0080048754.01.T01:intergenic
AAATAGGATGAATTACTTTG+GGG 0.602469 contig423end:+8684 MsG0080048754.01.T01:intron
AAATCCAGGTTCTGATGTCG+CGG 0.607221 contig423end:+8257 MsG0080048754.01.T01:CDS
TCGTTTATCATCCCAACTGA+AGG 0.607792 contig423end:-8802 MsG0080048754.01.T01:intergenic
CGTCCAACCAGAAACTAACA+TGG 0.609176 contig423end:+7725 MsG0080048754.01.T01:CDS
ATACCTTCAGTATAAAGTGC+CGG 0.609258 contig423end:+14564 MsG0080048754.01.T01:CDS
TGAGGCTGCGCACGAATGGA+CGG 0.609829 contig423end:-9730 MsG0080048754.01.T01:intergenic
TCAGCCGCGACATCAGAACC+TGG 0.609914 contig423end:-8261 MsG0080048754.01.T01:intergenic
TCAGCTATGAGAATTATAGC+AGG 0.610466 contig423end:+15712 MsG0080048754.01.T01:CDS
GCTATCAGGACCACCAACAA+TGG 0.613465 contig423end:-9824 MsG0080048754.01.T01:intergenic
ATGCTAGAGCTGCTATCCGG+TGG 0.619387 contig423end:+8002 MsG0080048754.01.T01:CDS
ACTTGGCGTATATTAAGAGA+AGG 0.620407 contig423end:-9525 MsG0080048754.01.T01:intergenic
GAGTACGGACTACCTTCTCA+AGG 0.620477 contig423end:+8024 MsG0080048754.01.T01:CDS
GCACCGGCACTTTATACTGA+AGG 0.621624 contig423end:-14567 MsG0080048754.01.T01:intergenic
AAGCAATTTATACAATCTAA+CGG 0.623074 contig423end:+8747 MsG0080048754.01.T01:CDS
AGTTGGGATGATAAACGACC+CGG 0.624716 contig423end:+8807 MsG0080048754.01.T01:CDS
AGAAGTAGAACAGAAGCAGG+TGG 0.625937 contig423end:-14259 MsG0080048754.01.T01:intergenic
GGCGTATATTAAGAGAAGGA+AGG 0.637006 contig423end:-9521 MsG0080048754.01.T01:intergenic
AACCAGAAACTAACATGGAG+AGG 0.638034 contig423end:+7730 MsG0080048754.01.T01:CDS
AATGTAGTAGTAAAAGCCAT+CGG 0.640548 contig423end:-7926 MsG0080048754.01.T01:intergenic
AAGTATCTCAACACAAATGG+AGG 0.642258 contig423end:+9544 MsG0080048754.01.T01:CDS
GCTAGAACTGCTGATAAACC+CGG 0.647231 contig423end:+14075 MsG0080048754.01.T01:CDS
TAACGTGTCTGGAGTCGTGG+TGG 0.648195 contig423end:-8050 MsG0080048754.01.T01:intergenic
CAGTAAGTGTAAGTATAATG+TGG 0.648603 contig423end:-7578 MsG0080048754.01.T01:intergenic
CTGTGTGATCTAGTACCACA+AGG 0.651524 contig423end:-15840 MsG0080048754.01.T01:intergenic
TAAGTGTAAGTATAATGTGG+TGG 0.655081 contig423end:-7575 MsG0080048754.01.T01:intergenic
AGACACGTGTTCCAATACTT+GGG 0.658920 contig423end:+14540 MsG0080048754.01.T01:intron
TTGTTGCAAGAAATCTGTTG+AGG 0.692493 contig423end:-9748 MsG0080048754.01.T01:intergenic
AATGGAGGTGCTGTTTCATG+TGG 0.693934 contig423end:+9559 MsG0080048754.01.T01:CDS
GAGAATTATAGCAGGCACAG+CGG 0.702772 contig423end:+15720 MsG0080048754.01.T01:CDS
TAGGTGTTGGGAAAGACCTG+AGG 0.706024 contig423end:+8194 MsG0080048754.01.T01:CDS
GAGACCTTATACACGTTGCG+CGG 0.716904 contig423end:-8228 MsG0080048754.01.T01:intergenic
CTTGTGGTACTAGATCACAC+AGG 0.786415 contig423end:+15841 MsG0080048754.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTAATATTAAAA+AGG - contig423end:12355-12374 MsG0080048754.01.T01:intergenic 0.0%
!!! ATTTTAAAAAAAAAAAAATT+AGG + contig423end:13501-13520 MsG0080048754.01.T01:intron 0.0%
!! ACATATATATAATATGAATT+TGG - contig423end:9263-9282 MsG0080048754.01.T01:intergenic 10.0%
!! ATAATTAACACATAATTTAT+TGG + contig423end:9096-9115 MsG0080048754.01.T01:intron 10.0%
!! TTATTGCTTAATAAATAAAT+AGG + contig423end:8668-8687 MsG0080048754.01.T01:intron 10.0%
!!! ACTAATTAATTTTTTTTTTG+AGG + contig423end:10428-10447 MsG0080048754.01.T01:intron 10.0%
!!! ATAATATAATTTTAACAGAT+TGG + contig423end:9208-9227 MsG0080048754.01.T01:intron 10.0%
!!! CTAATTAATTTTTTTTTTGA+GGG + contig423end:10429-10448 MsG0080048754.01.T01:intron 10.0%
!!! CTGTTAAAATTATATTATTT+TGG - contig423end:9206-9225 MsG0080048754.01.T01:intergenic 10.0%
!!! CTTATTTAAATATTTTTCAT+TGG + contig423end:12181-12200 MsG0080048754.01.T01:intron 10.0%
!!! TTAAAATTATATTATTTTGG+TGG - contig423end:9203-9222 MsG0080048754.01.T01:intergenic 10.0%
!! AAAAAAATTATTCAATACGT+GGG - contig423end:12802-12821 MsG0080048754.01.T01:intergenic 15.0%
!! AAACTTAGATATAAAAAATG+AGG - contig423end:7814-7833 MsG0080048754.01.T01:intergenic 15.0%
!! AAATAGAATGAAATAATCAT+TGG + contig423end:13275-13294 MsG0080048754.01.T01:intron 15.0%
!! AACATCTTGTATAAAAAATA+GGG - contig423end:10927-10946 MsG0080048754.01.T01:intergenic 15.0%
!! AATTATCAAACAAAATAACA+CGG + contig423end:12961-12980 MsG0080048754.01.T01:intron 15.0%
!! ATAACATAACATAATATCAA+AGG - contig423end:14303-14322 MsG0080048754.01.T01:intergenic 15.0%
!! ATACTGTATAAAAAAAAATC+AGG - contig423end:15322-15341 MsG0080048754.01.T01:intergenic 15.0%
!! ATTAACAAAAAAATTCAGAA+AGG + contig423end:10327-10346 MsG0080048754.01.T01:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + contig423end:13402-13421 MsG0080048754.01.T01:intron 15.0%
!! TAAAAAAATTATTCAATACG+TGG - contig423end:12803-12822 MsG0080048754.01.T01:intergenic 15.0%
!! TAACATAACATAATATCAAA+GGG - contig423end:14302-14321 MsG0080048754.01.T01:intergenic 15.0%
!! TATAAAAATAAACATCACAA+TGG - contig423end:13200-13219 MsG0080048754.01.T01:intergenic 15.0%
!! TGAACTATATTAAAATTGTT+AGG + contig423end:14857-14876 MsG0080048754.01.T01:intron 15.0%
!!! AAAAATTTGAGCATTTTAAA+AGG - contig423end:9286-9305 MsG0080048754.01.T01:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + contig423end:13442-13461 MsG0080048754.01.T01:intron 15.0%
!!! TACTAAATTCTTTTGTTTTA+TGG + contig423end:11662-11681 MsG0080048754.01.T01:intron 15.0%
!!! TCAATTAATGTTATTTATGT+AGG + contig423end:8455-8474 MsG0080048754.01.T01:intron 15.0%
!!! TTCTTTTATTGTTTAATCTT+TGG + contig423end:10781-10800 MsG0080048754.01.T01:intron 15.0%
!!! TTTTGTTAAAAGTTTACAAT+AGG - contig423end:10232-10251 MsG0080048754.01.T01:intergenic 15.0%
!!! TTTTGTTAATTTATATTGCT+CGG - contig423end:10317-10336 MsG0080048754.01.T01:intergenic 15.0%
!! AAACTACCATTAATATTTAC+AGG - contig423end:12929-12948 MsG0080048754.01.T01:intergenic 20.0%
!! AAAGAAAAGAGTTAAAGAAA+AGG - contig423end:8866-8885 MsG0080048754.01.T01:intergenic 20.0%
!! AACATAACATAATATCAAAG+GGG - contig423end:14301-14320 MsG0080048754.01.T01:intergenic 20.0%
!! AACTAAAATCTTACTTTCAA+AGG + contig423end:8830-8849 MsG0080048754.01.T01:CDS 20.0%
!! AAGCAATTTATACAATCTAA+CGG + contig423end:8747-8766 MsG0080048754.01.T01:CDS 20.0%
!! AGTTGTAATATATGAAACAT+AGG + contig423end:14425-14444 MsG0080048754.01.T01:intron 20.0%
!! ATAAATAGGATGAATTACTT+TGG + contig423end:8682-8701 MsG0080048754.01.T01:intron 20.0%
!! ATAAATCACATTATAGTCAA+TGG + contig423end:8907-8926 MsG0080048754.01.T01:intron 20.0%
!! ATAAATGATATGTACATGTA+TGG + contig423end:12588-12607 MsG0080048754.01.T01:intron 20.0%
!! ATATTGTATAAGACTTTACA+TGG - contig423end:8569-8588 MsG0080048754.01.T01:intergenic 20.0%
!! ATCACTAATATGTGAATTAA+GGG + contig423end:11336-11355 MsG0080048754.01.T01:intron 20.0%
!! ATGTAATAGACTTTATAGTT+GGG + contig423end:15340-15359 MsG0080048754.01.T01:intron 20.0%
!! ATGTTTAACTAAAAGAATCT+TGG + contig423end:9984-10003 MsG0080048754.01.T01:intron 20.0%
!! ATTCTAACAAATTATATCAC+AGG - contig423end:14333-14352 MsG0080048754.01.T01:intergenic 20.0%
!! CAAACAATCTTGATATATAT+TGG - contig423end:10382-10401 MsG0080048754.01.T01:intergenic 20.0%
!! CAACATCTTGTATAAAAAAT+AGG - contig423end:10928-10947 MsG0080048754.01.T01:intergenic 20.0%
!! TAAATAGGATGAATTACTTT+GGG + contig423end:8683-8702 MsG0080048754.01.T01:intron 20.0%
!! TAAATATCCTTAATATTTGC+AGG + contig423end:8149-8168 MsG0080048754.01.T01:intron 20.0%
!! TATCACTAATATGTGAATTA+AGG + contig423end:11335-11354 MsG0080048754.01.T01:intron 20.0%
!! TATGTAATAGACTTTATAGT+TGG + contig423end:15339-15358 MsG0080048754.01.T01:intron 20.0%
!! TCAACAAAAGTTAATGTATT+TGG - contig423end:11600-11619 MsG0080048754.01.T01:intergenic 20.0%
!! TCCATTTAAGTACTAAAAAT+TGG + contig423end:12515-12534 MsG0080048754.01.T01:intron 20.0%
!! TCGTATATTCACTAATTTAT+GGG - contig423end:11120-11139 MsG0080048754.01.T01:intergenic 20.0%
!! TCGTTAAAAAATAAAAGAGT+TGG + contig423end:11855-11874 MsG0080048754.01.T01:intron 20.0%
!!! AAAAAATTGTGTTTTAGAAG+AGG - contig423end:8382-8401 MsG0080048754.01.T01:intergenic 20.0%
!!! AAAATGCTCAAATTTTTGAA+GGG + contig423end:9289-9308 MsG0080048754.01.T01:intron 20.0%
!!! AAACAAGTTGATTACATATT+AGG + contig423end:9625-9644 MsG0080048754.01.T01:CDS 20.0%
!!! AACTCTTTTATTTTTTAACG+AGG - contig423end:11856-11875 MsG0080048754.01.T01:intergenic 20.0%
!!! ACAAAAATTTAATTTTGCAG+GGG + contig423end:9447-9466 MsG0080048754.01.T01:intron 20.0%
!!! ACACAAAAATTTAATTTTGC+AGG + contig423end:9445-9464 MsG0080048754.01.T01:intron 20.0%
!!! ATTAATTTAGAGTAGAGTTA+AGG + contig423end:14761-14780 MsG0080048754.01.T01:intron 20.0%
!!! CACAAAAATTTAATTTTGCA+GGG + contig423end:9446-9465 MsG0080048754.01.T01:intron 20.0%
!!! GTTATTTTGTTTGATAATTG+TGG - contig423end:12960-12979 MsG0080048754.01.T01:intergenic 20.0%
!!! TAAAATGCTCAAATTTTTGA+AGG + contig423end:9288-9307 MsG0080048754.01.T01:intron 20.0%
!!! TATGTAATCAACTTGTTTTT+TGG - contig423end:9623-9642 MsG0080048754.01.T01:intergenic 20.0%
!!! TATTTTGTTGTGTTATTTTC+AGG + contig423end:14207-14226 MsG0080048754.01.T01:CDS 20.0%
!!! TCCAATTTTTAGTACTTAAA+TGG - contig423end:12519-12538 MsG0080048754.01.T01:intergenic 20.0%
!!! TCTTGTTAGTTAATTTGATT+AGG + contig423end:10018-10037 MsG0080048754.01.T01:intron 20.0%
!!! TTTATGATGTCAATTTTGAT+AGG + contig423end:11433-11452 MsG0080048754.01.T01:intron 20.0%
! AAAAAAAATCAGGTACAGAA+AGG - contig423end:15312-15331 MsG0080048754.01.T01:intergenic 25.0%
! AAAAAAATTCAGAAAGGAGA+AGG + contig423end:10333-10352 MsG0080048754.01.T01:intron 25.0%
! AAAATCTGTCAAATTAGGTT+TGG + contig423end:13131-13150 MsG0080048754.01.T01:intron 25.0%
! AAAATGAAGCAGATATGTTA+AGG + contig423end:15461-15480 MsG0080048754.01.T01:intron 25.0%
! AAACTTATAAAAAAGGACAG+GGG + contig423end:10286-10305 MsG0080048754.01.T01:intron 25.0%
! AAAGTTGTATTGGAAATGTA+AGG + contig423end:13412-13431 MsG0080048754.01.T01:intron 25.0%
! AAATAGGATGAATTACTTTG+GGG + contig423end:8684-8703 MsG0080048754.01.T01:intron 25.0%
! AAATTGAATCACAGAGTAAA+TGG - contig423end:14958-14977 MsG0080048754.01.T01:intergenic 25.0%
! AAGATAGTAGCAGAAAATAT+TGG + contig423end:15370-15389 MsG0080048754.01.T01:intron 25.0%
! AAGGATCATTGAAACTTAAT+AGG + contig423end:14780-14799 MsG0080048754.01.T01:intron 25.0%
! AATGAAATATAGCAATGACT+AGG - contig423end:14711-14730 MsG0080048754.01.T01:intergenic 25.0%
! ACAACTTAAGAAATGAAAAC+TGG - contig423end:8405-8424 MsG0080048754.01.T01:intergenic 25.0%
! ACATAATTTATTGGCAAGTA+AGG + contig423end:9105-9124 MsG0080048754.01.T01:intron 25.0%
! AGATAGTAGCAGAAAATATT+GGG + contig423end:15371-15390 MsG0080048754.01.T01:intron 25.0%
! AGATTGTATAAATTGCTTGT+AGG - contig423end:8745-8764 MsG0080048754.01.T01:intergenic 25.0%
! AGGATCATTGAAACTTAATA+GGG + contig423end:14781-14800 MsG0080048754.01.T01:intron 25.0%
! ATACTAAATACAAAGAAGAG+AGG + contig423end:10670-10689 MsG0080048754.01.T01:intron 25.0%
! ATGAAATATAGCAATGACTA+GGG - contig423end:14710-14729 MsG0080048754.01.T01:intergenic 25.0%
! ATGTCCTTAATTGAAGAATT+AGG - contig423end:9078-9097 MsG0080048754.01.T01:intergenic 25.0%
! ATTAAAACACCTAGTAAACA+GGG - contig423end:15236-15255 MsG0080048754.01.T01:intergenic 25.0%
! ATTACAACATATTTCTCTAG+GGG - contig423end:12850-12869 MsG0080048754.01.T01:intergenic 25.0%
! CAAACTTATAAAAAAGGACA+GGG + contig423end:10285-10304 MsG0080048754.01.T01:intron 25.0%
! CAATCCTAATTCTTCAATTA+AGG + contig423end:9071-9090 MsG0080048754.01.T01:intron 25.0%
! CAGTTGCAAACTTATAAAAA+AGG + contig423end:10279-10298 MsG0080048754.01.T01:intron 25.0%
! CATTACAACATATTTCTCTA+GGG - contig423end:12851-12870 MsG0080048754.01.T01:intergenic 25.0%
! CTAAATATCCAATATCAGTA+TGG - contig423end:14886-14905 MsG0080048754.01.T01:intergenic 25.0%
! CTATTGTAAGAGAAATTCTT+AGG + contig423end:10176-10195 MsG0080048754.01.T01:intron 25.0%
! CTCACACAAATTTCTTAAAT+AGG - contig423end:12417-12436 MsG0080048754.01.T01:intergenic 25.0%
! CTCGTATATTCACTAATTTA+TGG - contig423end:11121-11140 MsG0080048754.01.T01:intergenic 25.0%
! CTCTAAATTAATGACATTTG+AGG - contig423end:14753-14772 MsG0080048754.01.T01:intergenic 25.0%
! CTTAATTGAAGAATTAGGAT+TGG - contig423end:9073-9092 MsG0080048754.01.T01:intergenic 25.0%
! GACATATTAGTGATAAGTAT+GGG - contig423end:11089-11108 MsG0080048754.01.T01:intergenic 25.0%
! GTAAATGCTATTGATGTATT+TGG - contig423end:11645-11664 MsG0080048754.01.T01:intergenic 25.0%
! TAATAAGAGATCAATTGACT+AGG - contig423end:10045-10064 MsG0080048754.01.T01:intergenic 25.0%
! TACATTTGTTCTTTATTACC+AGG + contig423end:9011-9030 MsG0080048754.01.T01:CDS 25.0%
! TGACATATTAGTGATAAGTA+TGG - contig423end:11090-11109 MsG0080048754.01.T01:intergenic 25.0%
!! ACGATTTTAGATCATGAAAA+CGG - contig423end:11810-11829 MsG0080048754.01.T01:intergenic 25.0%
!! ATAACATTTTCGTACAACTT+GGG + contig423end:11375-11394 MsG0080048754.01.T01:intron 25.0%
!! ATTTTAAATGAGCATATTGC+TGG - contig423end:12880-12899 MsG0080048754.01.T01:intergenic 25.0%
!! CACAGTATTTTACATATCAT+TGG - contig423end:15108-15127 MsG0080048754.01.T01:intergenic 25.0%
!! GTCTTTTTCTAATGAAGTAA+GGG - contig423end:13323-13342 MsG0080048754.01.T01:intergenic 25.0%
!! TATAACATTTTCGTACAACT+TGG + contig423end:11374-11393 MsG0080048754.01.T01:intron 25.0%
!! TATATTAATGCACCTTTTGT+TGG + contig423end:9901-9920 MsG0080048754.01.T01:CDS 25.0%
!! TGTCTCACTAATATTTTATG+AGG + contig423end:12105-12124 MsG0080048754.01.T01:intron 25.0%
!! TGTCTTTTTCTAATGAAGTA+AGG - contig423end:13324-13343 MsG0080048754.01.T01:intergenic 25.0%
!!! ATGATCTATTTGTTTTAAGC+TGG + contig423end:14985-15004 MsG0080048754.01.T01:intron 25.0%
!!! CAAAAATTTAATTTTGCAGG+GGG + contig423end:9448-9467 MsG0080048754.01.T01:intron 25.0%
!!! GCATGCTAATTATTTTGTAT+CGG + contig423end:7844-7863 MsG0080048754.01.T01:intron 25.0%
!!! TAATTATTTTGTATCGGTTC+AGG + contig423end:7850-7869 MsG0080048754.01.T01:intron 25.0%
!!! TATTGGTTTGATAGATTATC+AGG + contig423end:15485-15504 MsG0080048754.01.T01:intron 25.0%
!!! TGAAAGTAAGATTTTAGTTC+CGG - contig423end:8829-8848 MsG0080048754.01.T01:intergenic 25.0%
AAAATTATTCAATACGTGGG+CGG - contig423end:12799-12818 MsG0080048753.01.T01:intergenic 30.0%
AAAATTGGAAGTCTCTATTG+TGG + contig423end:12530-12549 MsG0080048754.01.T01:intron 30.0%
AAATAAGTTATGTGTACACG+TGG + contig423end:12490-12509 MsG0080048754.01.T01:intron 30.0%
AAATCCATTCTCTTCTTTGA+AGG + contig423end:7682-7701 MsG0080048754.01.T01:CDS 30.0%
AAATTGTGTGAGAGAAAAGT+TGG + contig423end:13362-13381 MsG0080048754.01.T01:intron 30.0%
AAGCAAAGCTTAATTGATGA+TGG - contig423end:7630-7649 MsG0080048754.01.T01:intergenic 30.0%
AAGTGATTGTATGTAATGAC+TGG + contig423end:14513-14532 MsG0080048754.01.T01:intron 30.0%
AATAAGTTATGTGTACACGT+GGG + contig423end:12491-12510 MsG0080048754.01.T01:intron 30.0%
AATGTACTACCATTTAGACA+TGG + contig423end:12622-12641 MsG0080048754.01.T01:intron 30.0%
AATGTAGTAGTAAAAGCCAT+CGG - contig423end:7929-7948 MsG0080048754.01.T01:intergenic 30.0%
ACAAAGATGTCTTATATGGT+TGG + contig423end:9658-9677 MsG0080048754.01.T01:CDS 30.0%
ACATTATAGTCAATGGCTTA+TGG + contig423end:8914-8933 MsG0080048754.01.T01:intron 30.0%
ACCATATAAGACATCTTTGT+TGG - contig423end:9658-9677 MsG0080048754.01.T01:intergenic 30.0%
ACGCTAATTAGGATGAATTA+AGG + contig423end:11011-11030 MsG0080048754.01.T01:intron 30.0%
AGAAATTTGTGTGAGATGTT+TGG + contig423end:12422-12441 MsG0080048754.01.T01:intron 30.0%
AGAGCAAAATCTCATAAAGT+TGG + contig423end:9597-9616 MsG0080048754.01.T01:CDS 30.0%
AGCAGATATGTTAAGGTTAT+TGG + contig423end:15468-15487 MsG0080048754.01.T01:intron 30.0%
AGGTATATAAGAATTGGGTA+TGG - contig423end:12688-12707 MsG0080048754.01.T01:intergenic 30.0%
AGTAGAAAACATAGAAGAAG+AGG - contig423end:13710-13729 MsG0080048754.01.T01:intergenic 30.0%
AGTGATAAGTATGGGATATT+GGG - contig423end:11081-11100 MsG0080048754.01.T01:intergenic 30.0%
ATAGTTGTCTCTTGTCTAAT+AGG - contig423end:12022-12041 MsG0080048754.01.T01:intergenic 30.0%
ATATAGTTCACTTAGTTGCA+AGG - contig423end:14847-14866 MsG0080048754.01.T01:intergenic 30.0%
ATATGATAGTAGTACTGTTG+TGG + contig423end:13534-13553 MsG0080048754.01.T01:intron 30.0%
ATCAAAGACAGTGATTTCAA+CGG - contig423end:14113-14132 MsG0080048754.01.T01:intergenic 30.0%
ATGAGACCCATTTCAAAAAT+TGG - contig423end:10585-10604 MsG0080048754.01.T01:intergenic 30.0%
ATGGTAGTACATTGATCAAA+TGG - contig423end:12615-12634 MsG0080048754.01.T01:intergenic 30.0%
ATTAAGACCCGTTATTTGAT+TGG + contig423end:12267-12286 MsG0080048754.01.T01:intron 30.0%
ATTAAGGGGTGATAAATTAG+TGG + contig423end:11027-11046 MsG0080048754.01.T01:intron 30.0%
ATTAGTACTAAGTCAATGTG+TGG + contig423end:10061-10080 MsG0080048754.01.T01:intron 30.0%
ATTAGTCATTAGCTGGAATT+TGG + contig423end:14669-14688 MsG0080048754.01.T01:intron 30.0%
ATTTACTAGAGATGCATTAG+TGG - contig423end:14385-14404 MsG0080048754.01.T01:intergenic 30.0%
CAGTAAGTGTAAGTATAATG+TGG - contig423end:7581-7600 MsG0080048754.01.T01:intergenic 30.0%
CATATCTTTCACGTGATTAT+TGG - contig423end:9967-9986 MsG0080048754.01.T01:intergenic 30.0%
CATGTGACCTTAAACTAATA+TGG + contig423end:10963-10982 MsG0080048754.01.T01:intron 30.0%
CATTAAAACACCTAGTAAAC+AGG - contig423end:15237-15256 MsG0080048754.01.T01:intergenic 30.0%
CATTGAAACTTAATAGGGTA+AGG + contig423end:14786-14805 MsG0080048754.01.T01:intron 30.0%
CGATTTCAAAACATGAGTAT+GGG - contig423end:13070-13089 MsG0080048754.01.T01:intergenic 30.0%
CGCTAATTAGGATGAATTAA+GGG + contig423end:11012-11031 MsG0080048754.01.T01:intron 30.0%
CTAACTATAAGGACACTATT+GGG + contig423end:14605-14624 MsG0080048754.01.T01:intron 30.0%
CTAATGACTAATAACTTTCG+TGG - contig423end:14661-14680 MsG0080048754.01.T01:intergenic 30.0%
CTAGTAAATAAGCCTGTTAT+TGG + contig423end:14396-14415 MsG0080048754.01.T01:intron 30.0%
GAAAGTTATTAGTCATTAGC+TGG + contig423end:14662-14681 MsG0080048754.01.T01:intron 30.0%
GACCTTAAACTAATATGGAT+GGG + contig423end:10968-10987 MsG0080048754.01.T01:intron 30.0%
GATTTCAAAACATGAGTATG+GGG - contig423end:13069-13088 MsG0080048754.01.T01:intergenic 30.0%
GCAAACTTATAAAAAAGGAC+AGG + contig423end:10284-10303 MsG0080048754.01.T01:intron 30.0%
GCATTACAACATATTTCTCT+AGG - contig423end:12852-12871 MsG0080048754.01.T01:intergenic 30.0%
GCTAATTAGGATGAATTAAG+GGG + contig423end:11013-11032 MsG0080048754.01.T01:intron 30.0%
GGAAATTGAAGAGTAAGTAA+AGG + contig423end:13555-13574 MsG0080048754.01.T01:intron 30.0%
GGAAGTTGTTTGGATAAAAA+TGG - contig423end:13606-13625 MsG0080048754.01.T01:intergenic 30.0%
GTACAATACATCAAAACTGA+TGG - contig423end:10895-10914 MsG0080048754.01.T01:intergenic 30.0%
GTTGCTCCTGTAAATATTAA+TGG + contig423end:12920-12939 MsG0080048754.01.T01:intron 30.0%
TAAGTGTAAGTATAATGTGG+TGG - contig423end:7578-7597 MsG0080048754.01.T01:intergenic 30.0%
TACCATTTAGACATGGTATT+GGG + contig423end:12629-12648 MsG0080048754.01.T01:intron 30.0%
TAGGATTCAACTGAATTCAA+TGG + contig423end:13643-13662 MsG0080048754.01.T01:intron 30.0%
TAGTGATAAGTATGGGATAT+TGG - contig423end:11082-11101 MsG0080048754.01.T01:intergenic 30.0%
TAGTTGTAAGGCTAACTATA+AGG + contig423end:14594-14613 MsG0080048754.01.T01:intron 30.0%
TATCCTTAATATTTGCAGGT+TGG + contig423end:8153-8172 MsG0080048754.01.T01:intron 30.0%
TCATATTCTACATGTCCATT+TGG + contig423end:10126-10145 MsG0080048754.01.T01:intron 30.0%
TCCAAACTCTATTATACTGA+TGG + contig423end:15556-15575 MsG0080048754.01.T01:intron 30.0%
TCCAACAAAGATGTCTTATA+TGG + contig423end:9654-9673 MsG0080048754.01.T01:CDS 30.0%
TCCATCAGTATAATAGAGTT+TGG - contig423end:15560-15579 MsG0080048754.01.T01:intergenic 30.0%
TGACCTTAAACTAATATGGA+TGG + contig423end:10967-10986 MsG0080048754.01.T01:intron 30.0%
TGTAAGAGAAATTCTTAGGT+AGG + contig423end:10180-10199 MsG0080048754.01.T01:intron 30.0%
TTAAAACACCTAGTAAACAG+GGG - contig423end:15235-15254 MsG0080048754.01.T01:intergenic 30.0%
TTAAGGGGTGATAAATTAGT+GGG + contig423end:11028-11047 MsG0080048754.01.T01:intron 30.0%
TTACTACTACATTATTGGCA+TGG + contig423end:7936-7955 MsG0080048754.01.T01:CDS 30.0%
TTCCACATTAACTAACCAAA+TGG - contig423end:10144-10163 MsG0080048754.01.T01:intergenic 30.0%
TTTAAGCTGGATCTAATCAA+GGG + contig423end:14998-15017 MsG0080048754.01.T01:intron 30.0%
! AAATTAATGACATTTGAGGC+AGG - contig423end:14749-14768 MsG0080048754.01.T01:intergenic 30.0%
! AACCCATCCATATTAGTTTA+AGG - contig423end:10973-10992 MsG0080048754.01.T01:intergenic 30.0%
! AGAGTATGATAACGCTAATT+AGG + contig423end:11000-11019 MsG0080048754.01.T01:intron 30.0%
! CGATTTTAGATCATGAAAAC+GGG - contig423end:11809-11828 MsG0080048754.01.T01:intergenic 30.0%
! GGCTTTTACTACTACATTAT+TGG + contig423end:7931-7950 MsG0080048754.01.T01:CDS 30.0%
! TCATAAACCCCAATTTTAAG+TGG + contig423end:12321-12340 MsG0080048754.01.T01:intron 30.0%
! TGTTTAGAGCATCTTCAATA+GGG + contig423end:11932-11951 MsG0080048754.01.T01:intron 30.0%
! TTTTAAGCTGGATCTAATCA+AGG + contig423end:14997-15016 MsG0080048754.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - contig423end:13232-13251 MsG0080048754.01.T01:intergenic 30.0%
!! AATCAAATAACGGGTCTTAA+TGG - contig423end:12268-12287 MsG0080048754.01.T01:intergenic 30.0%
!! ACTAATATGGATGGGTTATT+TGG + contig423end:10976-10995 MsG0080048754.01.T01:intron 30.0%
!! AGTTGTTGATAGTTGATTTG+TGG + contig423end:12389-12408 MsG0080048754.01.T01:intron 30.0%
!! CATAAACCCCAATTTTAAGT+GGG + contig423end:12322-12341 MsG0080048754.01.T01:intron 30.0%
!! CTAGTTTTTGCCTACATTTT+GGG - contig423end:11541-11560 MsG0080048754.01.T01:intergenic 30.0%
!! CTGTTTACTAGGTGTTTTAA+TGG + contig423end:15235-15254 MsG0080048754.01.T01:intron 30.0%
!! GTTGTTGATAGTTGATTTGT+GGG + contig423end:12390-12409 MsG0080048754.01.T01:intron 30.0%
!! TTCAAAGGGTGTTAACATTA+TGG + contig423end:14032-14051 MsG0080048754.01.T01:CDS 30.0%
!! TTTTAGAAGAGGAACATACT+TGG - contig423end:8371-8390 MsG0080048754.01.T01:intergenic 30.0%
!!! AAGGTAAGTTTTGTTCAAGA+TGG - contig423end:15293-15312 MsG0080048754.01.T01:intergenic 30.0%
!!! ACTAGTTTTTGCCTACATTT+TGG - contig423end:11542-11561 MsG0080048754.01.T01:intergenic 30.0%
!!! AGGGAATGAGATTTTTTTAG+TGG + contig423end:15160-15179 MsG0080048754.01.T01:intron 30.0%
!!! AGGTAAGTTTTGTTCAAGAT+GGG - contig423end:15292-15311 MsG0080048754.01.T01:intergenic 30.0%
!!! ATGTCTTATATGGTTGGTTT+TGG + contig423end:9664-9683 MsG0080048754.01.T01:CDS 30.0%
!!! CCATACTCATGTTTTGAAAT+CGG + contig423end:13068-13087 MsG0080048754.01.T01:intron 30.0%
!!! GAAAGTAAGATTTTAGTTCC+GGG - contig423end:8828-8847 MsG0080048754.01.T01:intergenic 30.0%
!!! GGTTTTAAGGATAGTTTAAG+AGG - contig423end:13733-13752 MsG0080048754.01.T01:intergenic 30.0%
!!! TTACTAGGTGTTTTAATGGA+TGG + contig423end:15239-15258 MsG0080048754.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + contig423end:13233-13252 MsG0080048754.01.T01:intron 30.0%
!!! TTTTTTAGTGGTTACATTCG+AGG + contig423end:15172-15191 MsG0080048754.01.T01:intron 30.0%
AAACATCACAATGGTAGACA+AGG - contig423end:13191-13210 MsG0080048754.01.T01:intergenic 35.0%
AAACTATCCTTAAAACCCAG+TGG + contig423end:13736-13755 MsG0080048754.01.T01:intron 35.0%
AAATTATTCAATACGTGGGC+GGG - contig423end:12798-12817 MsG0080048754.01.T01:intergenic 35.0%
AAGTATCTCAACACAAATGG+AGG + contig423end:9544-9563 MsG0080048754.01.T01:CDS 35.0%
ACAACTTGTAGACCAATAAC+AGG - contig423end:14411-14430 MsG0080048754.01.T01:intergenic 35.0%
ACAGGAGCAACTAAATCAAT+CGG - contig423end:12911-12930 MsG0080048754.01.T01:intergenic 35.0%
ACCATTTAGACATGGTATTG+GGG + contig423end:12630-12649 MsG0080048754.01.T01:intron 35.0%
ACGGGTAGGTATATAAGAAT+TGG - contig423end:12694-12713 MsG0080048754.01.T01:intergenic 35.0%
ACTTGGCGTATATTAAGAGA+AGG - contig423end:9528-9547 MsG0080048754.01.T01:intergenic 35.0%
AGAATTTCTCCTACACTACA+AGG + contig423end:15140-15159 MsG0080048754.01.T01:intron 35.0%
AGAGTTAAAGAAAAGGCCAA+AGG - contig423end:8859-8878 MsG0080048754.01.T01:intergenic 35.0%
AGCAATTTGGAGGAATATGT+TGG - contig423end:8336-8355 MsG0080048754.01.T01:intergenic 35.0%
ATAAGAATTGGGTATGGAGA+CGG - contig423end:12682-12701 MsG0080048754.01.T01:intergenic 35.0%
ATACCTTCAGTATAAAGTGC+CGG + contig423end:14564-14583 MsG0080048754.01.T01:CDS 35.0%
ATATACGAGAAACACTTGCT+TGG + contig423end:11132-11151 MsG0080048754.01.T01:intron 35.0%
ATGGTCTCACAATTTAAGTC+CGG - contig423end:15688-15707 MsG0080048754.01.T01:intergenic 35.0%
ATTAATATCAGCCACAAAGC+TGG + contig423end:15970-15989 MsG0080048754.01.T01:three_prime_UTR 35.0%
ATTCAATTTATCATCCCCGT+TGG - contig423end:12730-12749 MsG0080048754.01.T01:intergenic 35.0%
ATTTAAGCCGCTTATTACTC+TGG - contig423end:9239-9258 MsG0080048754.01.T01:intergenic 35.0%
ATTTGATTGGTACCTCCATT+GGG + contig423end:12280-12299 MsG0080048754.01.T01:intron 35.0%
CAACAGATTTCTTGCAACAA+TGG + contig423end:9751-9770 MsG0080048754.01.T01:CDS 35.0%
CAAGTGTAAAAAAGTCCTTG+TGG + contig423end:15825-15844 MsG0080048754.01.T01:three_prime_UTR 35.0%
CATCATAATAACCTCCAACT+AGG - contig423end:7880-7899 MsG0080048754.01.T01:intergenic 35.0%
CCAAAACATATTCACCATAG+AGG + contig423end:9697-9716 MsG0080048754.01.T01:CDS 35.0%
CCAACAAGAACATTTGGATT+AGG - contig423end:9802-9821 MsG0080048754.01.T01:intergenic 35.0%
CCACTGAAGGAAGAAAAAAT+AGG + contig423end:11994-12013 MsG0080048754.01.T01:intron 35.0%
CCGATTTCAAAACATGAGTA+TGG - contig423end:13071-13090 MsG0080048754.01.T01:intergenic 35.0%
CCTAATCCAAATGTTCTTGT+TGG + contig423end:9799-9818 MsG0080048754.01.T01:CDS 35.0%
CGGAGAAAATCTGTCAAATT+AGG + contig423end:13126-13145 MsG0080048754.01.T01:intron 35.0%
CGGGTAGGTATATAAGAATT+GGG - contig423end:12693-12712 MsG0080048754.01.T01:intergenic 35.0%
CTACCATTTAGACATGGTAT+TGG + contig423end:12628-12647 MsG0080048754.01.T01:intron 35.0%
GAAATGGGTCTCATATAAAG+TGG + contig423end:10591-10610 MsG0080048754.01.T01:intron 35.0%
GAATTTCTCCTACACTACAA+GGG + contig423end:15141-15160 MsG0080048754.01.T01:intron 35.0%
GACCCATTTCAAAAATTGGT+TGG - contig423end:10581-10600 MsG0080048754.01.T01:intergenic 35.0%
GAGTTAAAGAAAAGGCCAAA+GGG - contig423end:8858-8877 MsG0080048754.01.T01:intergenic 35.0%
GCATGGAGTGTAATTGAATT+TGG + contig423end:7953-7972 MsG0080048754.01.T01:CDS 35.0%
GCTAACTATAAGGACACTAT+TGG + contig423end:14604-14623 MsG0080048754.01.T01:intron 35.0%
GGATTTCAATACCTTCATTC+AGG + contig423end:9772-9791 MsG0080048754.01.T01:CDS 35.0%
GGTACGTATCACTAATATGT+GGG + contig423end:11049-11068 MsG0080048754.01.T01:intron 35.0%
GGTGCATTAATATAAGTTGC+TGG - contig423end:9895-9914 MsG0080048754.01.T01:intergenic 35.0%
GTAAGTAAAGGAGTTCAATC+AGG + contig423end:13567-13586 MsG0080048754.01.T01:intron 35.0%
GTCTTGAAATATGATCAGTC+TGG + contig423end:15413-15432 MsG0080048754.01.T01:intron 35.0%
TAACATGGATCATAGGTGTT+GGG + contig423end:8182-8201 MsG0080048754.01.T01:CDS 35.0%
TACAACAATTGCTTCTGCTT+GGG - contig423end:15784-15803 MsG0080048754.01.T01:intergenic 35.0%
TACCATAGTCTATATAGTGC+CGG - contig423end:14476-14495 MsG0080048754.01.T01:intergenic 35.0%
TAGTCAATGGCTTATGGTTA+TGG + contig423end:8920-8939 MsG0080048754.01.T01:intron 35.0%
TATGGTTATGGTATTGTGAC+AGG + contig423end:8932-8951 MsG0080048754.01.T01:intron 35.0%
TATTTGATTGGTACCTCCAT+TGG + contig423end:12279-12298 MsG0080048754.01.T01:intron 35.0%
TCAAAGACAGTGATTTCAAC+GGG - contig423end:14112-14131 MsG0080048754.01.T01:intergenic 35.0%
TCAACGGGAATGATATAAAC+CGG - contig423end:14097-14116 MsG0080048754.01.T01:intergenic 35.0%
TCAGCTATGAGAATTATAGC+AGG + contig423end:15712-15731 MsG0080048754.01.T01:CDS 35.0%
TCATGGATTTATAGAGCTTC+TGG + contig423end:8711-8730 MsG0080048754.01.T01:CDS 35.0%
TCCATTTGTGTTGAGATACT+TGG - contig423end:9545-9564 MsG0080048754.01.T01:intergenic 35.0%
TCTCCAACCTGCAAATATTA+AGG - contig423end:8159-8178 MsG0080048754.01.T01:intergenic 35.0%
TGAAGAGTTCCAGTTATACA+AGG + contig423end:8974-8993 MsG0080048754.01.T01:CDS 35.0%
TGTGAGTCCCACTTAAAATT+GGG - contig423end:12332-12351 MsG0080048754.01.T01:intergenic 35.0%
TTAAGAAGTAGAACAGAAGC+AGG - contig423end:14265-14284 MsG0080048754.01.T01:intergenic 35.0%
TTACAACAATTGCTTCTGCT+TGG - contig423end:15785-15804 MsG0080048754.01.T01:intergenic 35.0%
TTAGAACATGTTTGTGTCTG+TGG + contig423end:13929-13948 MsG0080048754.01.T01:intron 35.0%
TTAGGCATCCATACTGATAT+TGG + contig423end:14875-14894 MsG0080048754.01.T01:intron 35.0%
TTGTCCTTCAAAGAAGAGAA+TGG - contig423end:7689-7708 MsG0080048754.01.T01:intergenic 35.0%
TTGTTGCAAGAAATCTGTTG+AGG - contig423end:9751-9770 MsG0080048754.01.T01:intergenic 35.0%
! AATTTTGCAGACCGTTATAG+AGG + contig423end:8483-8502 MsG0080048754.01.T01:CDS 35.0%
! ACATTCGAGGTATTCTTACA+AGG + contig423end:15185-15204 MsG0080048754.01.T01:intron 35.0%
! ACTAGTCTAGAGTATATGTG+GGG + contig423end:10555-10574 MsG0080048754.01.T01:intron 35.0%
! CCTCTATGGTGAATATGTTT+TGG - contig423end:9700-9719 MsG0080048754.01.T01:intergenic 35.0%
! CTGTCAAATTAGGTTTGGTT+CGG + contig423end:13136-13155 MsG0080048754.01.T01:intron 35.0%
! GTCCATTTGGTTAGTTAATG+TGG + contig423end:10139-10158 MsG0080048754.01.T01:intron 35.0%
! GTGTTTAGAGCATCTTCAAT+AGG + contig423end:11931-11950 MsG0080048754.01.T01:intron 35.0%
! TCAAGATGGGGAGATTTTAA+TGG - contig423end:15279-15298 MsG0080048754.01.T01:intergenic 35.0%
! TGTCAAATTAGGTTTGGTTC+GGG + contig423end:13137-13156 MsG0080048754.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + contig423end:13468-13487 MsG0080048754.01.T01:intron 35.0%
!! AATTCTCATAGCTGATTCGA+TGG - contig423end:15707-15726 MsG0080048754.01.T01:intergenic 35.0%
!! ACAAAGAAGAGAGGTATTGT+TGG + contig423end:10679-10698 MsG0080048754.01.T01:intron 35.0%
!! AGACTAGTCTAGAGTATATG+TGG + contig423end:10553-10572 MsG0080048754.01.T01:intron 35.0%
!! ATGGACTGATTTGTTGTGTA+GGG + contig423end:15575-15594 MsG0080048754.01.T01:intron 35.0%
!! GACTAGTCTAGAGTATATGT+GGG + contig423end:10554-10573 MsG0080048754.01.T01:intron 35.0%
!! TGGAGGTACCAATCAAATAA+CGG - contig423end:12278-12297 MsG0080048754.01.T01:intergenic 35.0%
!! TTACTTTCAAAGGTACCCTT+TGG + contig423end:8840-8859 MsG0080048754.01.T01:intron 35.0%
!!! AAGGACTTTTTTACACTTGG+AGG - contig423end:15824-15843 MsG0080048754.01.T01:intergenic 35.0%
!!! AGATTTTCTCCGTTTTGACT+GGG - contig423end:13118-13137 MsG0080048754.01.T01:intergenic 35.0%
!!! AGGACTTTTTTACACTTGGA+GGG - contig423end:15823-15842 MsG0080048754.01.T01:intergenic 35.0%
!!! ATTTTTTCTTCCTTCAGTGG+AGG - contig423end:11994-12013 MsG0080048754.01.T01:intergenic 35.0%
!!! CACAAGGACTTTTTTACACT+TGG - contig423end:15827-15846 MsG0080048754.01.T01:intergenic 35.0%
!!! CCTATTTTTTCTTCCTTCAG+TGG - contig423end:11997-12016 MsG0080048754.01.T01:intergenic 35.0%
!!! GATTTTAAAGCGTCTTTGAG+AGG - contig423end:13799-13818 MsG0080048754.01.T01:intergenic 35.0%
!!! GGCCAACCAATTTTTGAAAT+GGG + contig423end:10576-10595 MsG0080048754.01.T01:intron 35.0%
!!! GGTAAGTTTTGTTCAAGATG+GGG - contig423end:15291-15310 MsG0080048754.01.T01:intergenic 35.0%
!!! TGGATTTTTCAAGAGCTTCA+TGG - contig423end:7669-7688 MsG0080048754.01.T01:intergenic 35.0%
!!! TTATTTTGTATCGGTTCAGG+TGG + contig423end:7853-7872 MsG0080048754.01.T01:intron 35.0%
!!! TTCCTACTTTTTGTGCCTTA+GGG - contig423end:15621-15640 MsG0080048754.01.T01:intergenic 35.0%
!!! TTTCCTACTTTTTGTGCCTT+AGG - contig423end:15622-15641 MsG0080048754.01.T01:intergenic 35.0%
AAAGGGTTCAAAAGACCCTA+AGG + contig423end:15603-15622 MsG0080048754.01.T01:CDS 40.0%
AAAGTTGGAGAGGGTAAAGT+TGG + contig423end:13377-13396 MsG0080048754.01.T01:intron 40.0%
AACCAGAAACTAACATGGAG+AGG + contig423end:7730-7749 MsG0080048754.01.T01:CDS 40.0%
AAGGCTACATCCACTACTTA+TGG + contig423end:15204-15223 MsG0080048754.01.T01:intron 40.0%
AATTATTCAATACGTGGGCG+GGG - contig423end:12797-12816 MsG0080048754.01.T01:intergenic 40.0%
ACGGTAAAGAAGAACCTCTA+TGG - contig423end:9714-9733 MsG0080048754.01.T01:intergenic 40.0%
ACGTTATATGTCCAAGTGAG+TGG + contig423end:8067-8086 MsG0080048754.01.T01:intron 40.0%
ACTCAAAAATCTCTCCCCAA+TGG - contig423end:12298-12317 MsG0080048754.01.T01:intergenic 40.0%
ACTTGGACATATAACGTGTC+TGG - contig423end:8064-8083 MsG0080048754.01.T01:intergenic 40.0%
AGAAGAGGAACATACTTGGA+TGG - contig423end:8367-8386 MsG0080048754.01.T01:intergenic 40.0%
AGACACGTGTTCCAATACTT+GGG + contig423end:14540-14559 MsG0080048754.01.T01:intron 40.0%
AGATTCACTCGTAAACAGGA+TGG - contig423end:15524-15543 MsG0080048754.01.T01:intergenic 40.0%
AGTGGTTGGAATCATAAAGC+TGG + contig423end:13957-13976 MsG0080048754.01.T01:intron 40.0%
ATACCCAAACCCAGTCAAAA+CGG + contig423end:13106-13125 MsG0080048754.01.T01:intron 40.0%
ATCTCATTCCCTTGTAGTGT+AGG - contig423end:15152-15171 MsG0080048754.01.T01:intergenic 40.0%
ATGATGGTTACACCTTCAGT+TGG + contig423end:8790-8809 MsG0080048754.01.T01:CDS 40.0%
ATGGCTCCAACAAGAACATT+TGG - contig423end:9808-9827 MsG0080048754.01.T01:intergenic 40.0%
CAAAGCAAAGGGAAGTTGTT+TGG - contig423end:13616-13635 MsG0080048754.01.T01:intergenic 40.0%
CAACACCTATGATCCATGTT+AGG - contig423end:8183-8202 MsG0080048754.01.T01:intergenic 40.0%
CAACGGGAATGATATAAACC+GGG - contig423end:14096-14115 MsG0080048754.01.T01:intergenic 40.0%
CAATCTAACGGTCACACATT+AGG + contig423end:8759-8778 MsG0080048754.01.T01:CDS 40.0%
CACTAGATTCACTCGTAAAC+AGG - contig423end:15528-15547 MsG0080048754.01.T01:intergenic 40.0%
CACTGTAAGAGCCTCTATAA+CGG - contig423end:8497-8516 MsG0080048754.01.T01:intergenic 40.0%
CCAAAGACAATACACTAGCA+TGG - contig423end:12210-12229 MsG0080048754.01.T01:intergenic 40.0%
CCAGAGTAAGAGCAGTAAAA+TGG - contig423end:8543-8562 MsG0080048754.01.T01:intergenic 40.0%
CCATGCTAGTGTATTGTCTT+TGG + contig423end:12207-12226 MsG0080048754.01.T01:intron 40.0%
CCTAAGCAAAGCAAAGCAAA+GGG - contig423end:13627-13646 MsG0080048754.01.T01:intergenic 40.0%
CTAACATGGATCATAGGTGT+TGG + contig423end:8181-8200 MsG0080048754.01.T01:CDS 40.0%
CTATAAGGACACTATTGGGT+CGG + contig423end:14609-14628 MsG0080048754.01.T01:intron 40.0%
CTGGTGACAACCTTAAGTTT+GGG + contig423end:7900-7919 MsG0080048754.01.T01:CDS 40.0%
GAGAAATTGTCACTGCTATC+AGG - contig423end:9841-9860 MsG0080048754.01.T01:intergenic 40.0%
GATTAGGTGAACCTGAATGA+AGG - contig423end:9786-9805 MsG0080048754.01.T01:intergenic 40.0%
GCCAAGTATCTCAACACAAA+TGG + contig423end:9541-9560 MsG0080048754.01.T01:CDS 40.0%
GGAACTCCTTCATAGACAAT+GGG - contig423end:10874-10893 MsG0080048754.01.T01:intergenic 40.0%
GGAGATTCTGGATTATCAGA+TGG + contig423end:7751-7770 MsG0080048754.01.T01:CDS 40.0%
GGCGTATATTAAGAGAAGGA+AGG - contig423end:9524-9543 MsG0080048754.01.T01:intergenic 40.0%
GGGTACGTATCACTAATATG+TGG + contig423end:11048-11067 MsG0080048754.01.T01:intron 40.0%
GGTATTGTGACAGGAATTCT+TGG + contig423end:8941-8960 MsG0080048754.01.T01:intron 40.0%
GTACTAAGTCAATGTGTGGT+TGG + contig423end:10065-10084 MsG0080048754.01.T01:intron 40.0%
GTATAATGTGGTGGTAGAAG+TGG - contig423end:7569-7588 MsG0080048754.01.T01:intergenic 40.0%
GTGAGTCCCACTTAAAATTG+GGG - contig423end:12331-12350 MsG0080048754.01.T01:intergenic 40.0%
GTGTGAGATGTTTGGTTAGA+GGG + contig423end:12430-12449 MsG0080048754.01.T01:intron 40.0%
GTGTGAGTCCCACTTAAAAT+TGG - contig423end:12333-12352 MsG0080048754.01.T01:intergenic 40.0%
GTTCTACTTCTTAAAGCTGC+TGG + contig423end:14271-14290 MsG0080048754.01.T01:CDS 40.0%
GTTGGAGGTTATTATGATGC+TGG + contig423end:7881-7900 MsG0080048754.01.T01:CDS 40.0%
TAAGAATTGGGTATGGAGAC+GGG - contig423end:12681-12700 MsG0080048754.01.T01:intergenic 40.0%
TACCAGCAGTATACGAGTTT+AGG - contig423end:11705-11724 MsG0080048754.01.T01:intergenic 40.0%
TCCTAAGCAAAGCAAAGCAA+AGG - contig423end:13628-13647 MsG0080048754.01.T01:intergenic 40.0%
TCGTTTATCATCCCAACTGA+AGG - contig423end:8805-8824 MsG0080048754.01.T01:intergenic 40.0%
TCTTTATTACCAGGATCTCC+TGG + contig423end:9020-9039 MsG0080048754.01.T01:CDS 40.0%
TGATGGTTACACCTTCAGTT+GGG + contig423end:8791-8810 MsG0080048754.01.T01:CDS 40.0%
TGGAACTCCTTCATAGACAA+TGG - contig423end:10875-10894 MsG0080048754.01.T01:intergenic 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG + contig423end:13368-13387 MsG0080048754.01.T01:intron 40.0%
TGTGTGAGATGTTTGGTTAG+AGG + contig423end:12429-12448 MsG0080048754.01.T01:intron 40.0%
TTCAAAACATGAGTATGGGG+CGG - contig423end:13066-13085 MsG0080048754.01.T01:intergenic 40.0%
TTCTGCTTGGGTTCAAGAAT+AGG - contig423end:15772-15791 MsG0080048754.01.T01:intergenic 40.0%
TTTGATTGGTACCTCCATTG+GGG + contig423end:12281-12300 MsG0080048754.01.T01:intron 40.0%
! AAGAATTAGGATTGGTGACC+TGG - contig423end:9065-9084 MsG0080048754.01.T01:intergenic 40.0%
! AATTGCTTCTGAGAAGTTGC+CGG + contig423end:15666-15685 MsG0080048754.01.T01:CDS 40.0%
! AGAATTAGGATTGGTGACCT+GGG - contig423end:9064-9083 MsG0080048754.01.T01:intergenic 40.0%
! ATTTAGACATGGTATTGGGG+CGG + contig423end:12633-12652 MsG0080048754.01.T01:intron 40.0%
! CAATGTGTGGTTGGTTAGTA+AGG + contig423end:10074-10093 MsG0080048754.01.T01:intron 40.0%
! CATTTTCGTACAACTTGGGT+TGG + contig423end:11379-11398 MsG0080048754.01.T01:intron 40.0%
! CCATTTTACTGCTCTTACTC+TGG + contig423end:8540-8559 MsG0080048754.01.T01:CDS 40.0%
! TAATGACATTTGAGGCAGGA+AGG - contig423end:14745-14764 MsG0080048754.01.T01:intergenic 40.0%
! TTAAAGCGTCTTTGAGAGGT+GGG - contig423end:13795-13814 MsG0080048754.01.T01:intergenic 40.0%
! TTCTTTGAAGGACAACGATC+CGG + contig423end:7694-7713 MsG0080048754.01.T01:CDS 40.0%
! TTTAAAGCGTCTTTGAGAGG+TGG - contig423end:13796-13815 MsG0080048754.01.T01:intergenic 40.0%
!! AAAGCAAGAGCACCAACAAA+AGG - contig423end:9916-9935 MsG0080048754.01.T01:intergenic 40.0%
!! AATTACTTTGGGGTGCATCA+TGG + contig423end:8694-8713 MsG0080048754.01.T01:CDS 40.0%
!! ACGCTTTAAAATCACTGCCA+TGG + contig423end:13806-13825 MsG0080048754.01.T01:intron 40.0%
!! CAGATTTTCTCCGTTTTGAC+TGG - contig423end:13119-13138 MsG0080048754.01.T01:intergenic 40.0%
!! CATGTTAGTTTCTGGTTGGA+CGG - contig423end:7727-7746 MsG0080048754.01.T01:intergenic 40.0%
!! GATGGACTGATTTGTTGTGT+AGG + contig423end:15574-15593 MsG0080048754.01.T01:intron 40.0%
!! GGAGGTACCAATCAAATAAC+GGG - contig423end:12277-12296 MsG0080048754.01.T01:intergenic 40.0%
!! GGGCCAACCAATTTTTGAAA+TGG + contig423end:10575-10594 MsG0080048754.01.T01:intron 40.0%
!! TCTCCATGTTAGTTTCTGGT+TGG - contig423end:7731-7750 MsG0080048754.01.T01:intergenic 40.0%
!! TGGACTGATTTGTTGTGTAG+GGG + contig423end:15576-15595 MsG0080048754.01.T01:intron 40.0%
!!! AAAGGGGGGTTTTGTTTTGA+GGG - contig423end:13767-13786 MsG0080048754.01.T01:intergenic 40.0%
!!! ATGAGTGTCGTTTTAGGCTT+TGG + contig423end:13239-13258 MsG0080048754.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + contig423end:13472-13491 MsG0080048754.01.T01:intron 40.0%
AAGAATTGGGTATGGAGACG+GGG - contig423end:12680-12699 MsG0080048754.01.T01:intergenic 45.0%
ACAATGCTAGAGCTGCTATC+CGG + contig423end:7999-8018 MsG0080048754.01.T01:CDS 45.0%
AGAAGTAGAACAGAAGCAGG+TGG - contig423end:14262-14281 MsG0080048754.01.T01:intergenic 45.0%
AGGAAGAAGAACAAAGCGAC+GGG - contig423end:13690-13709 MsG0080048754.01.T01:intergenic 45.0%
AGTTGGGATGATAAACGACC+CGG + contig423end:8807-8826 MsG0080048754.01.T01:CDS 45.0%
ATGAGTTTGAGCATGGGTTC+GGG + contig423end:13017-13036 MsG0080048754.01.T01:intron 45.0%
ATTCGCGATGAGTTTGAGCA+TGG + contig423end:13010-13029 MsG0080048754.01.T01:intron 45.0%
CAAAAATCTCTCCCCAATGG+AGG - contig423end:12295-12314 MsG0080048754.01.T01:intergenic 45.0%
CACCGAAAACATGCTCAAAG+CGG - contig423end:8093-8112 MsG0080048754.01.T01:intergenic 45.0%
CACCGGCACTATATAGACTA+TGG + contig423end:14471-14490 MsG0080048754.01.T01:intron 45.0%
CAGACACGTGTTCCAATACT+TGG + contig423end:14539-14558 MsG0080048754.01.T01:intron 45.0%
CCCTTTGCTTTGCTTTGCTT+AGG + contig423end:13624-13643 MsG0080048754.01.T01:intron 45.0%
CGCATACCCATTGTCTATGA+AGG + contig423end:10865-10884 MsG0080048754.01.T01:intron 45.0%
CGTCCAACCAGAAACTAACA+TGG + contig423end:7725-7744 MsG0080048754.01.T01:CDS 45.0%
CTAACATGGAGAGGAGATTC+TGG + contig423end:7739-7758 MsG0080048754.01.T01:CDS 45.0%
CTCTCTCTGTCCCAAAATGT+AGG + contig423end:11528-11547 MsG0080048754.01.T01:intron 45.0%
CTGGGTTTGGGTATGAGTTT+AGG - contig423end:13100-13119 MsG0080048754.01.T01:intergenic 45.0%
CTGTGTGATCTAGTACCACA+AGG - contig423end:15843-15862 MsG0080048754.01.T01:intergenic 45.0%
CTTGTGGTACTAGATCACAC+AGG + contig423end:15841-15860 MsG0080048754.01.T01:three_prime_UTR 45.0%
GACCCTAAGGCACAAAAAGT+AGG + contig423end:15616-15635 MsG0080048754.01.T01:CDS 45.0%
GAGAATTATAGCAGGCACAG+CGG + contig423end:15720-15739 MsG0080048754.01.T01:CDS 45.0%
GAGAGCCTAACATGGATCAT+AGG + contig423end:8175-8194 MsG0080048754.01.T01:CDS 45.0%
GAGGAAGAAGAACAAAGCGA+CGG - contig423end:13691-13710 MsG0080048754.01.T01:intergenic 45.0%
GATGAGTTTGAGCATGGGTT+CGG + contig423end:13016-13035 MsG0080048754.01.T01:intron 45.0%
GATGGCTGCTTGAAGCAATT+TGG - contig423end:8349-8368 MsG0080048754.01.T01:intergenic 45.0%
GCCCCAATACCATGTCTAAA+TGG - contig423end:12634-12653 MsG0080048754.01.T01:intergenic 45.0%
GCCTTACAACTATGTAGCAC+CGG - contig423end:14586-14605 MsG0080048754.01.T01:intergenic 45.0%
GCTAGAACTGCTGATAAACC+CGG + contig423end:14075-14094 MsG0080048754.01.T01:CDS 45.0%
GCTGGATCTAATCAAGGGTT+AGG + contig423end:15003-15022 MsG0080048754.01.T01:intron 45.0%
GCTGGTGACAACCTTAAGTT+TGG + contig423end:7899-7918 MsG0080048754.01.T01:CDS 45.0%
GGGTCTTAATGGTCACTAGT+GGG - contig423end:12257-12276 MsG0080048754.01.T01:intergenic 45.0%
GGTCTTAATGGTCACTAGTG+GGG - contig423end:12256-12275 MsG0080048754.01.T01:intergenic 45.0%
GGTGTGACCAGAGTAATAAG+CGG + contig423end:9229-9248 MsG0080048754.01.T01:intron 45.0%
GTATATTGAGCCTGGAAACC+AGG - contig423end:9041-9060 MsG0080048754.01.T01:intergenic 45.0%
GTCCTAAACTCGTATACTGC+TGG + contig423end:11700-11719 MsG0080048754.01.T01:intron 45.0%
GTGTGAGAGAAAAGTTGGAG+AGG + contig423end:13367-13386 MsG0080048754.01.T01:intron 45.0%
GTTCTTGTTGGAGCCATTGT+TGG + contig423end:9811-9830 MsG0080048754.01.T01:CDS 45.0%
TCAAAACATGAGTATGGGGC+GGG - contig423end:13065-13084 MsG0080048754.01.T01:intergenic 45.0%
TGCTTGGGTTCAAGAATAGG+AGG - contig423end:15769-15788 MsG0080048754.01.T01:intergenic 45.0%
TGTTGTGTAGGGGTGGAAAA+GGG + contig423end:15586-15605 MsG0080048754.01.T01:intron 45.0%
TTATCATCCCCGTTGGATGT+GGG - contig423end:12723-12742 MsG0080048754.01.T01:intergenic 45.0%
TTCGCGATGAGTTTGAGCAT+GGG + contig423end:13011-13030 MsG0080048754.01.T01:intron 45.0%
TTGTTGTGTAGGGGTGGAAA+AGG + contig423end:15585-15604 MsG0080048754.01.T01:intron 45.0%
TTTAGACGTGAGACTCGTTC+AGG - contig423end:12060-12079 MsG0080048754.01.T01:intergenic 45.0%
TTTATCATCCCCGTTGGATG+TGG - contig423end:12724-12743 MsG0080048754.01.T01:intergenic 45.0%
TTTCTTTGCTTTGCCACCAC+CGG - contig423end:13844-13863 MsG0080048754.01.T01:intergenic 45.0%
TTTGTGTCTGTGGCAAACAG+TGG + contig423end:13939-13958 MsG0080048754.01.T01:intron 45.0%
! AAATCCAGGTTCTGATGTCG+CGG + contig423end:8257-8276 MsG0080048754.01.T01:CDS 45.0%
! ATAAAGCTGGCTCTTGAAGC+CGG + contig423end:13970-13989 MsG0080048754.01.T01:CDS 45.0%
! ATATAACGTGTCTGGAGTCG+TGG - contig423end:8056-8075 MsG0080048754.01.T01:intergenic 45.0%
! CTCCTCTCCATGTTAGTTTC+TGG - contig423end:7735-7754 MsG0080048754.01.T01:intergenic 45.0%
! CTGAAGGTATGCCCAAGTAT+TGG - contig423end:14554-14573 MsG0080048754.01.T01:intergenic 45.0%
! CTGCATGAGCCTTGTATAAC+TGG - contig423end:8986-9005 MsG0080048754.01.T01:intergenic 45.0%
! GAATTAGGATTGGTGACCTG+GGG - contig423end:9063-9082 MsG0080048754.01.T01:intergenic 45.0%
! TTTAGACATGGTATTGGGGC+GGG + contig423end:12634-12653 MsG0080048754.01.T01:intron 45.0%
!! AATGGAGGTGCTGTTTCATG+TGG + contig423end:9559-9578 MsG0080048754.01.T01:CDS 45.0%
!! ACTGATTTGTTGTGTAGGGG+TGG + contig423end:15579-15598 MsG0080048754.01.T01:intron 45.0%
!! CAGGGGGTATTCTGTACAAA+GGG + contig423end:9464-9483 MsG0080048754.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + contig423end:13471-13490 MsG0080048754.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - contig423end:13490-13471 MsG0080048754.01.T01:intergenic 45.0%
!!! GAAAGGGGGGTTTTGTTTTG+AGG - contig423end:13768-13787 MsG0080048754.01.T01:intergenic 45.0%
!!! GGTGCTCTTGCTTTTTTCTC+TGG + contig423end:9922-9941 MsG0080048754.01.T01:CDS 45.0%
!!! TCTCCGTTTTGACTGGGTTT+GGG - contig423end:13112-13131 MsG0080048754.01.T01:intergenic 45.0%
!!! TTCTCCGTTTTGACTGGGTT+TGG - contig423end:13113-13132 MsG0080048754.01.T01:intergenic 45.0%
!! GTATTTAAATTTAAATATAA+TGG - contig423end:15939-15958 MsG0080048754.01.T01:intergenic 5.0%
AAGGTCTCGGCTCAAAATCC+AGG + contig423end:8243-8262 MsG0080048754.01.T01:CDS 50.0%
ACACCCTTTGAACCAAGAGC+CGG - contig423end:14024-14043 MsG0080048754.01.T01:intergenic 50.0%
AGGGGTTCAGCCATAAGTAG+TGG - contig423end:15217-15236 MsG0080048754.01.T01:intergenic 50.0%
CACACCAAGTACCAGCTTTG+TGG - contig423end:15984-16003 MsG0080048754.01.T01:intergenic 50.0%
CACTATTGGGTCGGCATGTT+TGG + contig423end:14618-14637 MsG0080048754.01.T01:intron 50.0%
CATAGGCACCACACTAGATG+CGG + contig423end:14442-14461 MsG0080048754.01.T01:intron 50.0%
CCATCGGAAGCCCAAACTTA+AGG - contig423end:7913-7932 MsG0080048754.01.T01:intergenic 50.0%
CCTTAAGTTTGGGCTTCCGA+TGG + contig423end:7910-7929 MsG0080048754.01.T01:CDS 50.0%
CGGGTCTTAATGGTCACTAG+TGG - contig423end:12258-12277 MsG0080048754.01.T01:intergenic 50.0%
CGTTACCTACCCACATCCAA+CGG + contig423end:12711-12730 MsG0080048754.01.T01:intron 50.0%
CGTTGGATGTGGGTAGGTAA+CGG - contig423end:12713-12732 MsG0080048754.01.T01:intergenic 50.0%
CTGGTTGGACGGTAATCTTC+CGG - contig423end:7716-7735 MsG0080048754.01.T01:intergenic 50.0%
CTGTCAAGAACCTCCACTGA+AGG + contig423end:11981-12000 MsG0080048754.01.T01:intron 50.0%
CTTCAGTGGAGGTTCTTGAC+AGG - contig423end:11983-12002 MsG0080048754.01.T01:intergenic 50.0%
CTTGTTGGAGCCATTGTTGG+TGG + contig423end:9814-9833 MsG0080048754.01.T01:CDS 50.0%
GAGACCTTATACACGTTGCG+CGG - contig423end:8231-8250 MsG0080048754.01.T01:intergenic 50.0%
GCGCAACGTGTATAAGGTCT+CGG + contig423end:8230-8249 MsG0080048754.01.T01:CDS 50.0%
GCTATCAGGACCACCAACAA+TGG - contig423end:9827-9846 MsG0080048754.01.T01:intergenic 50.0%
GGCATCAAAACCCATATCCG+TGG - contig423end:13170-13189 MsG0080048754.01.T01:intergenic 50.0%
GGCTGCTTGAAGCAATTTGG+AGG - contig423end:8346-8365 MsG0080048754.01.T01:intergenic 50.0%
GGGCAGATAACCACGGATAT+GGG + contig423end:13157-13176 MsG0080048754.01.T01:intron 50.0%
GTTACCTACCCACATCCAAC+GGG + contig423end:12712-12731 MsG0080048754.01.T01:intron 50.0%
GTTGGATGTGGGTAGGTAAC+GGG - contig423end:12712-12731 MsG0080048754.01.T01:intergenic 50.0%
TCAGCCACAAAGCTGGTACT+TGG + contig423end:15977-15996 MsG0080048754.01.T01:three_prime_UTR 50.0%
TGAGTTTGAGCATGGGTTCG+GGG + contig423end:13018-13037 MsG0080048754.01.T01:intron 50.0%
TGGCTGAACCCCTGTTTACT+AGG + contig423end:15224-15243 MsG0080048754.01.T01:intron 50.0%
TGTCTGTGGCAAACAGTGGT+TGG + contig423end:13943-13962 MsG0080048754.01.T01:intron 50.0%
TTACCTACCCACATCCAACG+GGG + contig423end:12713-12732 MsG0080048754.01.T01:intron 50.0%
TTCCAGGCTCAATATACCCC+AGG + contig423end:9044-9063 MsG0080048754.01.T01:CDS 50.0%
TTCTTTGCTTTGCCACCACC+GGG - contig423end:13843-13862 MsG0080048754.01.T01:intergenic 50.0%
TTGAGAGGTGGGAAGGGAAA+GGG - contig423end:13784-13803 MsG0080048754.01.T01:intergenic 50.0%
TTGGGAAAGACCTGAGGACA+TGG + contig423end:8200-8219 MsG0080048754.01.T01:CDS 50.0%
TTTGAGAGGTGGGAAGGGAA+AGG - contig423end:13785-13804 MsG0080048754.01.T01:intergenic 50.0%
! CACAAAGCTGGTACTTGGTG+TGG + contig423end:15982-16001 MsG0080048754.01.T01:three_prime_UTR 50.0%
! GAGTACGGACTACCTTCTCA+AGG + contig423end:8024-8043 MsG0080048754.01.T01:CDS 50.0%
! GCACCGGCACTTTATACTGA+AGG - contig423end:14570-14589 MsG0080048754.01.T01:intergenic 50.0%
! GGTGGTGGCAAAGCAAAGAA+AGG + contig423end:13843-13862 MsG0080048754.01.T01:intron 50.0%
! TAAAGCTGGCTCTTGAAGCC+GGG + contig423end:13971-13990 MsG0080048754.01.T01:CDS 50.0%
! TGACATTTGAGGCAGGAAGG+AGG - contig423end:14742-14761 MsG0080048754.01.T01:intergenic 50.0%
!! ACATTAGGCGCTGACGATGA+TGG + contig423end:8774-8793 MsG0080048754.01.T01:CDS 50.0%
!! GCAGGGGGTATTCTGTACAA+AGG + contig423end:9463-9482 MsG0080048754.01.T01:intron 50.0%
!! GCCGGTGCTACATAGTTGTA+AGG + contig423end:14582-14601 MsG0080048754.01.T01:intron 50.0%
!! GGCCGCTTTGAGCATGTTTT+CGG + contig423end:8088-8107 MsG0080048754.01.T01:intron 50.0%
!! TAGGTGTTGGGAAAGACCTG+AGG + contig423end:8194-8213 MsG0080048754.01.T01:CDS 50.0%
!! TTGGTTCGGGCAGATAACCA+CGG + contig423end:13150-13169 MsG0080048754.01.T01:intron 50.0%
ACCAGGATCTCCTGGTTTCC+AGG + contig423end:9028-9047 MsG0080048754.01.T01:CDS 55.0%
ACTAGATGCGGACACGACAC+CGG + contig423end:14454-14473 MsG0080048754.01.T01:intron 55.0%
AGCAGGCACAGCGGCAAATA+TGG + contig423end:15729-15748 MsG0080048754.01.T01:CDS 55.0%
AGCTGCTATCCGGTGGAGTA+CGG + contig423end:8009-8028 MsG0080048754.01.T01:CDS 55.0%
ATGAGTATGGGGCGGGTAAC+AGG - contig423end:13058-13077 MsG0080048754.01.T01:intergenic 55.0%
ATGCTAGAGCTGCTATCCGG+TGG + contig423end:8002-8021 MsG0080048754.01.T01:CDS 55.0%
ATTCAATACGTGGGCGGGGA+TGG - contig423end:12793-12812 MsG0080048754.01.T01:intergenic 55.0%
CACTCCGCGCAACGTGTATA+AGG + contig423end:8224-8243 MsG0080048754.01.T01:CDS 55.0%
CGGGCAGATAACCACGGATA+TGG + contig423end:13156-13175 MsG0080048754.01.T01:intron 55.0%
GAAGGTAGTCCGTACTCCAC+CGG - contig423end:8021-8040 MsG0080048754.01.T01:intergenic 55.0%
GACCTGGGGTATATTGAGCC+TGG - contig423end:9049-9068 MsG0080048754.01.T01:intergenic 55.0%
GCAGGCACAGCGGCAAATAT+GGG + contig423end:15730-15749 MsG0080048754.01.T01:CDS 55.0%
GTTCAGGTGGACCTAGTTGG+AGG + contig423end:7866-7885 MsG0080048754.01.T01:intron 55.0%
TCGGTTCAGGTGGACCTAGT+TGG + contig423end:7863-7882 MsG0080048754.01.T01:intron 55.0%
TGAGAGGTGGGAAGGGAAAG+GGG - contig423end:13783-13802 MsG0080048754.01.T01:intergenic 55.0%
TGTCGTGTCCGCATCTAGTG+TGG - contig423end:14453-14472 MsG0080048754.01.T01:intergenic 55.0%
TTCAATACGTGGGCGGGGAT+GGG - contig423end:12792-12811 MsG0080048754.01.T01:intergenic 55.0%
TTCTGATGTCGCGGCTGAGA+CGG + contig423end:8266-8285 MsG0080048754.01.T01:CDS 55.0%
TTTGAGCATGGGTTCGGGGT+GGG + contig423end:13022-13041 MsG0080048754.01.T01:intron 55.0%
! ACATGGTATTGGGGCGGGAT+GGG + contig423end:12639-12658 MsG0080048754.01.T01:intron 55.0%
! AGCGTCTTTGAGAGGTGGGA+AGG - contig423end:13791-13810 MsG0080048754.01.T01:intergenic 55.0%
! GCAGGTTGGAGAGCCTAACA+TGG + contig423end:8167-8186 MsG0080048754.01.T01:intron 55.0%
! GCGTCTTTGAGAGGTGGGAA+GGG - contig423end:13790-13809 MsG0080048754.01.T01:intergenic 55.0%
! GGACCGGCTCTTGGTTCAAA+GGG + contig423end:14018-14037 MsG0080048754.01.T01:CDS 55.0%
! GGAGACGCCACTGGGTTTTA+AGG - contig423end:13746-13765 MsG0080048754.01.T01:intergenic 55.0%
! TAACGTGTCTGGAGTCGTGG+TGG - contig423end:8053-8072 MsG0080048754.01.T01:intergenic 55.0%
! TGGACCGGCTCTTGGTTCAA+AGG + contig423end:14017-14036 MsG0080048754.01.T01:CDS 55.0%
!! GATGTGGGTAGGTAACGGGT+AGG - contig423end:12708-12727 MsG0080048754.01.T01:intergenic 55.0%
!!! GTTTTGAGGGAGACGCCACT+GGG - contig423end:13754-13773 MsG0080048754.01.T01:intergenic 55.0%
!!! TGTTTTGAGGGAGACGCCAC+TGG - contig423end:13755-13774 MsG0080048754.01.T01:intergenic 55.0%
AGAGGTGGGAAGGGAAAGGG+GGG - contig423end:13781-13800 MsG0080048754.01.T01:intergenic 60.0%
CATCCCCGTTGGATGTGGGT+AGG - contig423end:12719-12738 MsG0080048754.01.T01:intergenic 60.0%
CTGTTGAGGCTGCGCACGAA+TGG - contig423end:9737-9756 MsG0080048754.01.T01:intergenic 60.0%
GAACCAAGAGCCGGTCCAAC+CGG - contig423end:14015-14034 MsG0080048754.01.T01:intergenic 60.0%
GAGAGGTGGGAAGGGAAAGG+GGG - contig423end:13782-13801 MsG0080048754.01.T01:intergenic 60.0%
GCCTGGAAACCAGGAGATCC+TGG - contig423end:9032-9051 MsG0080048754.01.T01:intergenic 60.0%
GCTCAAAGCGGCCACTCACT+TGG - contig423end:8081-8100 MsG0080048754.01.T01:intergenic 60.0%
GCTTTGCCACCACCGGGTTT+GGG - contig423end:13837-13856 MsG0080048754.01.T01:intergenic 60.0%
GTTTGAGCATGGGTTCGGGG+TGG + contig423end:13021-13040 MsG0080048754.01.T01:intron 60.0%
TCAATACGTGGGCGGGGATG+GGG - contig423end:12791-12810 MsG0080048754.01.T01:intergenic 60.0%
TCAGCCGCGACATCAGAACC+TGG - contig423end:8264-8283 MsG0080048754.01.T01:intergenic 60.0%
TGAGGCTGCGCACGAATGGA+CGG - contig423end:9733-9752 MsG0080048754.01.T01:intergenic 60.0%
TGCTTTGCCACCACCGGGTT+TGG - contig423end:13838-13857 MsG0080048754.01.T01:intergenic 60.0%
! CATGGTATTGGGGCGGGATG+GGG + contig423end:12640-12659 MsG0080048754.01.T01:intron 60.0%
! GACATGGTATTGGGGCGGGA+TGG + contig423end:12638-12657 MsG0080048754.01.T01:intron 60.0%
ACCGGGTTTGGGAGGAGCCA+TGG - contig423end:13826-13845 MsG0080048754.01.T01:intergenic 65.0%
ATGGCTCCTCCCAAACCCGG+TGG + contig423end:13825-13844 MsG0080048754.01.T01:intron 65.0%
GCCATGGCTCCTCCCAAACC+CGG + contig423end:13822-13841 MsG0080048754.01.T01:intron 65.0%
GGCTGAGACGGCAGCTGCAT+TGG + contig423end:8278-8297 MsG0080048754.01.T01:CDS 65.0%
GGGTCGGCATGTTTGGCCAG+CGG + contig423end:14625-14644 MsG0080048754.01.T01:intron 65.0%
GTATTGGGGCGGGATGGGGA+CGG + contig423end:12644-12663 MsG0080048754.01.T01:intron 65.0%
TATTGGGGCGGGATGGGGAC+GGG + contig423end:12645-12664 MsG0080048754.01.T01:intron 65.0%
TCGTGGTGCGTAGTTGCCGC+TGG - contig423end:14644-14663 MsG0080048754.01.T01:intergenic 65.0%
TCTCATCCCCCGTTCCCCGA+CGG + contig423end:12749-12768 MsG0080048754.01.T01:intron 65.0%
TGAAGCCGGGAAGGCGACAC+CGG + contig423end:13984-14003 MsG0080048754.01.T01:CDS 65.0%
TTGCCACCACCGGGTTTGGG+AGG - contig423end:13834-13853 MsG0080048754.01.T01:intergenic 65.0%
! ACGGGAGCGCAGAGAGAGAG+TGG - contig423end:13672-13691 MsG0080048754.01.T01:intergenic 65.0%
! CGCGGAGTGTCCATGTCCTC+AGG - contig423end:8213-8232 MsG0080048754.01.T01:intergenic 65.0%
! CGTGTCTGGAGTCGTGGTGG+CGG - contig423end:8050-8069 MsG0080048754.01.T01:intergenic 65.0%
! GCTGGCTCTTGAAGCCGGGA+AGG + contig423end:13975-13994 MsG0080048754.01.T01:CDS 65.0%
!! TCGTGGTGGCGGCCTTGAGA+AGG - contig423end:8039-8058 MsG0080048754.01.T01:intergenic 65.0%
ACCCGAACCCCGTCGGGGAA+CGG - contig423end:12761-12780 MsG0080048754.01.T01:intergenic 70.0%
ATACGTGGGCGGGGATGGGG+CGG - contig423end:12788-12807 MsG0080048754.01.T01:intergenic 70.0%
CCAAGAGCCGGTCCAACCGG+TGG - contig423end:14012-14031 MsG0080048754.01.T01:intergenic 70.0%
CGGGGATACCCGAACCCCGT+CGG - contig423end:12768-12787 MsG0080048754.01.T01:intergenic 70.0%
CTCATCCCCCGTTCCCCGAC+GGG + contig423end:12750-12769 MsG0080048754.01.T01:intron 70.0%
GCTCCTCCCAAACCCGGTGG+TGG + contig423end:13828-13847 MsG0080048754.01.T01:intron 70.0%
GGGATACCCGAACCCCGTCG+GGG - contig423end:12766-12785 MsG0080048754.01.T01:intergenic 70.0%
GGGGATACCCGAACCCCGTC+GGG - contig423end:12767-12786 MsG0080048754.01.T01:intergenic 70.0%
TCATCCCCCGTTCCCCGACG+GGG + contig423end:12751-12770 MsG0080048754.01.T01:intron 70.0%
! ACCGGCTCCACCGGTTGGAC+CGG + contig423end:14002-14021 MsG0080048754.01.T01:CDS 70.0%
! CCACCGGTTGGACCGGCTCT+TGG + contig423end:14009-14028 MsG0080048754.01.T01:CDS 70.0%
!! GAAGGCGACACCGGCTCCAC+CGG + contig423end:13993-14012 MsG0080048754.01.T01:CDS 70.0%
!! TGGAGCCGGTGTCGCCTTCC+CGG - contig423end:13992-14011 MsG0080048754.01.T01:intergenic 70.0%
CCCCGTTCCCCGACGGGGTT+CGG + contig423end:12756-12775 MsG0080048754.01.T01:intron 75.0%
CCCGAACCCCGTCGGGGAAC+GGG - contig423end:12760-12779 MsG0080048754.01.T01:intergenic 75.0%
CCCGTTCCCCGACGGGGTTC+GGG + contig423end:12757-12776 MsG0080048754.01.T01:intron 75.0%
CCGAACCCCGTCGGGGAACG+GGG - contig423end:12759-12778 MsG0080048754.01.T01:intergenic 75.0%
CGAACCCCGTCGGGGAACGG+GGG - contig423end:12758-12777 MsG0080048754.01.T01:intergenic 75.0%
GCCGGTCCAACCGGTGGAGC+CGG - contig423end:14006-14025 MsG0080048754.01.T01:intergenic 75.0%
TACGTGGGCGGGGATGGGGC+GGG - contig423end:12787-12806 MsG0080048754.01.T01:intergenic 75.0%
!! GCGACACCGGCTCCACCGGT+TGG + contig423end:13997-14016 MsG0080048754.01.T01:CDS 75.0%
! ACGTGGGCGGGGATGGGGCG+GGG - contig423end:12786-12805 MsG0080048754.01.T01:intergenic 80.0%
Chromosome Type Strat End Strand Name
contig423end gene 7559 16067 7559 ID=MsG0080048754.01;Name=MsG0080048754.01
contig423end mRNA 7559 16067 7559 ID=MsG0080048754.01.T01;Parent=MsG0080048754.01;Name=MsG0080048754.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0.09|1|1|1|11|263|665
contig423end exon 15596 16067 15596 ID=MsG0080048754.01.T01:exon:17751;Parent=MsG0080048754.01.T01
contig423end exon 14542 14598 14542 ID=MsG0080048754.01.T01:exon:17750;Parent=MsG0080048754.01.T01
contig423end exon 14194 14292 14194 ID=MsG0080048754.01.T01:exon:17749;Parent=MsG0080048754.01.T01
contig423end exon 13959 14096 13959 ID=MsG0080048754.01.T01:exon:17748;Parent=MsG0080048754.01.T01
contig423end exon 9467 9955 9467 ID=MsG0080048754.01.T01:exon:17747;Parent=MsG0080048754.01.T01
contig423end exon 8954 9065 8954 ID=MsG0080048754.01.T01:exon:17746;Parent=MsG0080048754.01.T01
contig423end exon 8690 8851 8690 ID=MsG0080048754.01.T01:exon:17745;Parent=MsG0080048754.01.T01
contig423end exon 8477 8569 8477 ID=MsG0080048754.01.T01:exon:17744;Parent=MsG0080048754.01.T01
contig423end exon 8171 8371 8171 ID=MsG0080048754.01.T01:exon:17743;Parent=MsG0080048754.01.T01
contig423end exon 7872 8081 7872 ID=MsG0080048754.01.T01:exon:17742;Parent=MsG0080048754.01.T01
contig423end exon 7559 7786 7559 ID=MsG0080048754.01.T01:exon:17741;Parent=MsG0080048754.01.T01
contig423end CDS 7559 7786 7559 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 7872 8081 7872 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 8171 8371 8171 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 8477 8569 8477 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 8690 8851 8690 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 8954 9065 8954 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 9467 9955 9467 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 13959 14096 13959 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 14194 14292 14194 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 14542 14598 14542 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end CDS 15596 15804 15596 ID=MsG0080048754.01.T01:cds;Parent=MsG0080048754.01.T01
contig423end three_prime_UTR 15805 16067 15805 ID=MsG0080048754.01.T01:three_prime_utr;Parent=MsG0080048754.01.T01
Gene Sequence

>MsG0080048754.01.T01

ATGGCTTCCACTTCTACCACCACATTATACTTACACTTACTGTTGTTAATGTTAACATTTTGTTCATTCCATCATCAATTAAGCTTTGCTTTCACTTCACAAGAGTACCATGAAGCTCTTGAAAAATCCATTCTCTTCTTTGAAGGACAACGATCCGGAAGATTACCGTCCAACCAGAAACTAACATGGAGAGGAGATTCTGGATTATCAGATGGCTCTTCTTATCATGTGGACCTAGTTGGAGGTTATTATGATGCTGGTGACAACCTTAAGTTTGGGCTTCCGATGGCTTTTACTACTACATTATTGGCATGGAGTGTAATTGAATTTGGAAGCTCAATGCAAGATCAGATTGACAATGCTAGAGCTGCTATCCGGTGGAGTACGGACTACCTTCTCAAGGCCGCCACCACGACTCCAGACACGTTATATGTCCAAGTTGGAGAGCCTAACATGGATCATAGGTGTTGGGAAAGACCTGAGGACATGGACACTCCGCGCAACGTGTATAAGGTCTCGGCTCAAAATCCAGGTTCTGATGTCGCGGCTGAGACGGCAGCTGCATTGGCAGCTTCTTCATTAGTATTCAAAGATTCAGATCCAACATATTCCTCCAAATTGCTTCAAGCAGCCATCCAAGTATTCAATTTTGCAGACCGTTATAGAGGCTCTTACAGTGACTCTCTTAATTCTGTTGTCTGTCCATTTTACTGCTCTTACTCTGGATACCATGATGAATTACTTTGGGGTGCATCATGGATTTATAGAGCTTCTGGAATTAGCTCCTACAAGCAATTTATACAATCTAACGGTCACACATTAGGCGCTGACGATGATGGTTACACCTTCAGTTGGGATGATAAACGACCCGGAACTAAAATCTTACTTTCAAAGGAATTCTTGGAGAAAGATTCTGAAGAGTTCCAGTTATACAAGGCTCATGCAGACAATTACATTTGTTCTTTATTACCAGGATCTCCTGGTTTCCAGGCTCAATATACCCCAGGGGGTATTCTGTACAAAGGGAGTGAGAGCAATTTACAGTATGTGACATCTACATCCTTCCTTCTCTTAATATACGCCAAGTATCTCAACACAAATGGAGGTGCTGTTTCATGTGGTACATCAAAAATCACAGAGCAAAATCTCATAAAGTTGGCCAAAAAACAAGTTGATTACATATTAGGTGATAATCCAACAAAGATGTCTTATATGGTTGGTTTTGGAGAGAAATATCCAAAACATATTCACCATAGAGGTTCTTCTTTACCGTCCATTCGTGCGCAGCCTCAACAGATTTCTTGCAACAATGGATTTCAATACCTTCATTCAGGTTCACCTAATCCAAATGTTCTTGTTGGAGCCATTGTTGGTGGTCCTGATAGCAGTGACAATTTCTCTGATGATAGAAATAATTATCAACAGTCAGAACCAGCAACTTATATTAATGCACCTTTTGTTGGTGCTCTTGCTTTTTTCTCTGGTCAAGAATCAATGGTTGGAATCATAAAGCTGGCTCTTGAAGCCGGGAAGGCGACACCGGCTCCACCGGTTGGACCGGCTCTTGGTTCAAAGGGTGTTAACATTATGGCTTTCTGTAAAGATTACAATGCTAGAACTGCTGATAAACCCGATTTCAGACAGTATATTTTGTTGTGTTATTTTCAGGATAAAAGTTTTACTTTCATATTGAAGACTCCACCTGCTTCTGTTCTACTTCTTAAAGCTGCTGACACGTGTTCCAATACTTGGGCATACCTTCAGTATAAAGTGCCGGTGCTACATAGTTGGGTGGAAAAGGGTTCAAAAGACCCTAAGGCACAAAAAGTAGGAAAAGTCACAGTTGATCAATTGCGTACAATTGCTTCTGAGAAGTTGCCGGACTTAAATTGTGAGACCATCGAATCAGCTATGAGAATTATAGCAGGCACAGCGGCAAATATGGGAATTGATGTTGATCCTCCTATTCTTGAACCCAAGCAGAAGCAATTGTTGTAA

Protein sequence

>MsG0080048754.01.T01

MASTSTTTLYLHLLLLMLTFCSFHHQLSFAFTSQEYHEALEKSILFFEGQRSGRLPSNQKLTWRGDSGLSDGSSYHVDLVGGYYDAGDNLKFGLPMAFTTTLLAWSVIEFGSSMQDQIDNARAAIRWSTDYLLKAATTTPDTLYVQVGEPNMDHRCWERPEDMDTPRNVYKVSAQNPGSDVAAETAAALAASSLVFKDSDPTYSSKLLQAAIQVFNFADRYRGSYSDSLNSVVCPFYCSYSGYHDELLWGASWIYRASGISSYKQFIQSNGHTLGADDDGYTFSWDDKRPGTKILLSKEFLEKDSEEFQLYKAHADNYICSLLPGSPGFQAQYTPGGILYKGSESNLQYVTSTSFLLLIYAKYLNTNGGAVSCGTSKITEQNLIKLAKKQVDYILGDNPTKMSYMVGFGEKYPKHIHHRGSSLPSIRAQPQQISCNNGFQYLHSGSPNPNVLVGAIVGGPDSSDNFSDDRNNYQQSEPATYINAPFVGALAFFSGQESMVGIIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPDFRQYILLCYFQDKSFTFILKTPPASVLLLKAADTCSNTWAYLQYKVPVLHSWVEKGSKDPKAQKVGKVTVDQLRTIASEKLPDLNCETIESAMRIIAGTAANMGIDVDPPILEPKQKQLL*