AlfalfaGEDB | MsG0880042305.01

M. sativa cultivar ZhongmuNo.1 / MsG0880042305.01

KEGG: K00748
GO: GO:0008915 GO:0009245
PFAM: PF02684

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042305.01.T01	XP_013444159.1	87.273	275	26	2	1	266	43	317	7.38E-169	486

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042305.01.T01	F4IF99	57.353	272	109	3	2	266	34	305	1.23E-107	322

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042305.01.T01	A0A072TLS9	87.273	275	26	2	1	266	43	317	3.53e-169	486

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048683.01	MsG0880042305.01	0.806748	7.075925e-50	3.871210e-47
MsG0180000546.01	MsG0880042305.01	0.810786	9.691355e-51	5.896554e-48
MsG0180001088.01	MsG0880042305.01	0.819857	9.318618e-53	7.255392e-50
MsG0180001712.01	MsG0880042305.01	0.801087	1.062501e-48	5.029697e-46
MsG0180003189.01	MsG0880042305.01	0.801849	7.416735e-49	3.579022e-46
MsG0180004390.01	MsG0880042305.01	0.804923	1.710979e-49	8.933798e-47
MsG0180004765.01	MsG0880042305.01	0.822329	2.511317e-53	2.095463e-50
MsG0180004926.01	MsG0880042305.01	0.834041	3.769870e-56	4.420761e-53
MsG0180005730.01	MsG0880042305.01	0.803537	3.324302e-49	1.674904e-46
MsG0180006054.01	MsG0880042305.01	0.815752	7.870432e-52	5.473509e-49
MsG0180006104.01	MsG0880042305.01	0.800798	1.217161e-48	5.719311e-46
MsG0780040596.01	MsG0880042305.01	0.801160	1.026657e-48	4.868783e-46
MsG0780040794.01	MsG0880042305.01	0.810309	1.228910e-50	7.382326e-48
MsG0780041015.01	MsG0880042305.01	-0.843680	1.207532e-58	1.903815e-55
MsG0780041435.01	MsG0880042305.01	0.800338	1.510341e-48	7.014887e-46
MsG0780041507.01	MsG0880042305.01	0.806977	6.327696e-50	3.482461e-47
MsG0780041729.01	MsG0880042305.01	-0.804371	2.230392e-49	1.148042e-46
MsG0780041747.01	MsG0880042305.01	0.812919	3.327506e-51	2.142574e-48
MsG0880042161.01	MsG0880042305.01	0.818629	1.774335e-52	1.335113e-49
MsG0880042305.01	MsG0880042434.01	0.807094	5.979707e-50	3.300832e-47
MsG0880042305.01	MsG0880042656.01	0.816281	5.996834e-52	4.231263e-49
MsG0880042305.01	MsG0880043454.01	0.804077	2.568870e-49	1.312327e-46
MsG0880042305.01	MsG0880045765.01	0.817375	3.406660e-52	2.476739e-49
MsG0880042305.01	MsG0880045992.01	0.813005	3.185631e-51	2.056037e-48
MsG0880042305.01	MsG0880046967.01	0.804816	1.801385e-49	9.379702e-47
MsG0880042305.01	MsG0880047294.01	0.830783	2.418178e-55	2.573734e-52
MsG0280010916.01	MsG0880042305.01	0.833787	4.363882e-56	5.078587e-53
MsG0280011163.01	MsG0880042305.01	0.812066	5.111350e-51	3.217235e-48
MsG0280011175.01	MsG0880042305.01	0.814725	1.330817e-51	8.999312e-49
MsG0280011216.01	MsG0880042305.01	0.809728	1.638991e-50	9.697905e-48
MsG0280011376.01	MsG0880042305.01	0.833821	4.278748e-56	4.984817e-53
MsG0380011895.01	MsG0880042305.01	0.805773	1.135234e-49	6.058173e-47
MsG0380012005.01	MsG0880042305.01	0.826512	2.604328e-54	2.447526e-51
MsG0380012362.01	MsG0880042305.01	0.803882	2.819406e-49	1.433144e-46
MsG0380013853.01	MsG0880042305.01	0.820837	5.555136e-53	4.444571e-50
MsG0380014706.01	MsG0880042305.01	0.839352	1.668626e-57	2.298373e-54
MsG0380014727.01	MsG0880042305.01	0.837848	4.080341e-57	5.367934e-54
MsG0380014866.01	MsG0880042305.01	0.803347	3.640181e-49	1.824945e-46
MsG0680030880.01	MsG0880042305.01	0.824101	9.684078e-54	8.495620e-51
MsG0680031561.01	MsG0880042305.01	0.804569	2.028398e-49	1.049383e-46
MsG0680032460.01	MsG0880042305.01	-0.827150	1.833900e-54	1.755619e-51
MsG0680033465.01	MsG0880042305.01	0.829637	4.604439e-55	4.740070e-52
MsG0680034739.01	MsG0880042305.01	0.802803	4.716310e-49	2.331996e-46
MsG0680035580.01	MsG0880042305.01	0.806237	9.067440e-50	4.896646e-47
MsG0480018883.01	MsG0880042305.01	0.803618	3.198544e-49	1.614808e-46
MsG0480020024.01	MsG0880042305.01	0.843112	1.711904e-58	2.650824e-55
MsG0480020025.01	MsG0880042305.01	0.823918	1.069500e-53	9.334721e-51
MsG0480020788.01	MsG0880042305.01	0.819102	1.385205e-52	1.056083e-49
MsG0480021869.01	MsG0880042305.01	0.816060	6.716514e-52	4.710514e-49
MsG0480022933.01	MsG0880042305.01	0.803076	4.141650e-49	2.061940e-46
MsG0480023251.01	MsG0880042305.01	0.835681	1.456322e-56	1.793973e-53
MsG0580024363.01	MsG0880042305.01	-0.813590	2.369543e-51	1.553859e-48
MsG0580024494.01	MsG0880042305.01	0.807030	6.167855e-50	3.399190e-47
MsG0580024495.01	MsG0880042305.01	0.824016	1.014123e-53	8.874955e-51
MsG0580024790.01	MsG0880042305.01	-0.805615	1.225769e-49	6.514415e-47
MsG0380015374.01	MsG0880042305.01	0.807810	4.214100e-50	2.370004e-47
MsG0380015745.01	MsG0880042305.01	0.802651	5.071235e-49	2.497573e-46
MsG0380016182.01	MsG0880042305.01	0.811300	7.502190e-51	4.626779e-48
MsG0380016740.01	MsG0880042305.01	0.847962	8.294466e-60	1.499029e-56
MsG0380017085.01	MsG0880042305.01	0.806965	6.366637e-50	3.502727e-47
MsG0380017126.01	MsG0880042305.01	0.800074	1.709578e-48	7.886970e-46
MsG0380017202.01	MsG0880042305.01	0.813265	2.793141e-51	1.815423e-48
MsG0380017322.01	MsG0880042305.01	0.816919	4.313117e-52	3.096746e-49
MsG0380017941.01	MsG0880042305.01	0.801552	8.531007e-49	4.085782e-46
MsG0480018251.01	MsG0880042305.01	0.807498	4.909429e-50	2.738793e-47
MsG0480018402.01	MsG0880042305.01	0.812860	3.428026e-51	2.203794e-48
MsG0580029376.01	MsG0880042305.01	0.815215	1.036129e-51	7.099520e-49
MsG0580029999.01	MsG0880042305.01	-0.821208	4.561230e-53	3.687400e-50
MsG0680030636.01	MsG0880042305.01	0.820917	5.322294e-53	4.267867e-50
MsG0280006753.01	MsG0880042305.01	-0.801633	8.212392e-49	3.941203e-46
MsG0280007547.01	MsG0880042305.01	0.838037	3.647959e-57	4.827002e-54
MsG0280008894.01	MsG0880042305.01	0.830249	3.265572e-55	3.422037e-52
MsG0280010216.01	MsG0880042305.01	0.811260	7.654206e-51	4.715714e-48
MsG0780037330.01	MsG0880042305.01	0.814900	1.217513e-51	8.271420e-49
MsG0780038644.01	MsG0880042305.01	0.814850	1.248774e-51	8.472648e-49
MsG0780039438.01	MsG0880042305.01	0.841551	4.437922e-58	6.544018e-55

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042305.01.T01	MTR_8g012965	87.273	275	26	2	1	266	43	317	8.94e-173	486

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042305.01.T01	AT2G04560	57.353	272	109	3	2	266	34	305	1.25e-108	322

Find 67 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGCAAGAGATGGCGAATTT+AGG	0.165758	8:-6872830	MsG0880042305.01.T01:CDS
ATATCTCAGTGATGGGAATT+TGG	0.223187	8:-6872552	MsG0880042305.01.T01:CDS
TGTATTAACAGTTGATTCTA+AGG	0.234708	8:-6871402	MsG0880042305.01.T01:CDS
ATTGTTGCCGGCGAGGTTTC+CGG	0.288963	8:-6872801	MsG0880042305.01.T01:CDS
TGCAAGAGATGGCGAATTTA+GGG	0.301664	8:-6872829	MsG0880042305.01.T01:CDS
AGATGTTATGGAGTTGAATT+TGG	0.311579	8:-6871043	MsG0880042305.01.T01:intron
ATTATGTAGCACCATCATTC+TGG	0.317124	8:-6871203	MsG0880042305.01.T01:CDS
GATAAAATTTGTAGATTGAA+TGG	0.324230	8:-6871102	MsG0880042305.01.T01:CDS
ACTGTTATTAGCTTGCTTCC+TGG	0.350190	8:-6870346	MsG0880042305.01.T01:intron
TCCTGTCTTGGAAGATGTTA+TGG	0.362592	8:-6871055	MsG0880042305.01.T01:CDS
GGATTATCTGCAACCTTTGT+TGG	0.368849	8:-6871081	MsG0880042305.01.T01:CDS
CCATTCATTGATTGAGCAGT+TGG	0.372854	8:+6870839	None:intergenic
TATCTCAGTGATGGGAATTT+GGG	0.375925	8:-6872551	MsG0880042305.01.T01:CDS
ACCTCTTGTACTCTGCTTCC+AGG	0.389554	8:+6870328	None:intergenic
GGAGGTGAAGAAAGGCTTAG+AGG	0.391546	8:-6871171	MsG0880042305.01.T01:CDS
TTCCATTGCTTCTCGTCTCA+TGG	0.404421	8:-6872775	MsG0880042305.01.T01:CDS
TTCCATTGTATTAGCGAAGA+TGG	0.412306	8:+6870292	None:intergenic
TAGAGGACTGGCAGAATTTG+TGG	0.429359	8:-6871154	MsG0880042305.01.T01:CDS
CCAATGCCCGAAAATCGAAC+TGG	0.449765	8:+6872726	None:intergenic
TTATGTAGCACCATCATTCT+GGG	0.449943	8:-6871202	MsG0880042305.01.T01:CDS
GGGACCGTTCAAAGGTGGCC+TGG	0.466943	8:-6870191	MsG0880042305.01.T01:CDS
CTTTGTTGGACATCCTGTCT+TGG	0.467487	8:-6871067	MsG0880042305.01.T01:CDS
GATGTGGAAAACTTCATTGC+TGG	0.481798	8:-6870212	MsG0880042305.01.T01:CDS
CCTTTCCATGCCCAGAATGA+TGG	0.484321	8:+6871192	None:intergenic
GTTCTGCATACTTCCAAATG+AGG	0.487182	8:-6871124	MsG0880042305.01.T01:CDS
ATCACTGAGATATCTTCAAT+AGG	0.489071	8:+6872562	None:intergenic
CTTTCATGTTGCACCTAATG+AGG	0.492042	8:-6870234	MsG0880042305.01.T01:CDS
TGGAATCAATACAGCAGGCC+AGG	0.515787	8:+6870173	None:intergenic
TGAAGAAAGGCTTAGAGGAC+TGG	0.519272	8:-6871166	MsG0880042305.01.T01:CDS
CCCGAAAATCGAACTGGGAA+AGG	0.520386	8:+6872732	None:intergenic
ATCAATGAATGGAGGGCTGA+AGG	0.523214	8:-6870828	MsG0880042305.01.T01:CDS
CCAACTGCTCAATCAATGAA+TGG	0.527823	8:-6870839	MsG0880042305.01.T01:CDS
ACGAGAAGCAATGGAATCAC+CGG	0.531851	8:+6872782	None:intergenic
GAAATGGTGAAGACTTCCTC+AGG	0.533796	8:-6870806	MsG0880042305.01.T01:CDS
TATTGAAGATATCTCAGTGA+TGG	0.535792	8:-6872560	MsG0880042305.01.T01:CDS
GTATTAACAGTTGATTCTAA+GGG	0.537432	8:-6871401	MsG0880042305.01.T01:CDS
ATGTGGAAAACTTCATTGCT+GGG	0.538493	8:-6870211	MsG0880042305.01.T01:CDS
GAATGGAGGGCTGAAGGAAA+TGG	0.543268	8:-6870822	MsG0880042305.01.T01:CDS
AGCCATGAGACGAGAAGCAA+TGG	0.544018	8:+6872773	None:intergenic
TCCATAACATCTTCCAAGAC+AGG	0.545112	8:+6871054	None:intergenic
CATGGAAAGGAGGTGAAGAA+AGG	0.547868	8:-6871179	MsG0880042305.01.T01:CDS
ATAGATATGGCTGCAAGAGA+TGG	0.548714	8:-6872840	None:intergenic
TAGCACCATCATTCTGGGCA+TGG	0.550692	8:-6871197	MsG0880042305.01.T01:CDS
TGAAAGACAGTCGTCAATTG+TGG	0.550753	8:+6870251	None:intergenic
CTGCTCAATCAATGAATGGA+GGG	0.552804	8:-6870835	MsG0880042305.01.T01:CDS
GCAGAGTACAAGAGGTCAGT+CGG	0.558596	8:-6870321	MsG0880042305.01.T01:CDS
TCATTGCTGGGACCGTTCAA+AGG	0.562768	8:-6870199	MsG0880042305.01.T01:CDS
TTCCATCTTCGCTAATACAA+TGG	0.570495	8:-6870294	MsG0880042305.01.T01:CDS
ATTGAAGATATCTCAGTGAT+GGG	0.571831	8:-6872559	MsG0880042305.01.T01:CDS
TCAGCAAAAGTTGCATTCGC+CGG	0.578477	8:-6871235	MsG0880042305.01.T01:CDS
CCATCATTCTGGGCATGGAA+AGG	0.583758	8:-6871192	MsG0880042305.01.T01:CDS
TCACCTGGAATCAATACAGC+AGG	0.585506	8:+6870168	None:intergenic
TTGCTGGGACCGTTCAAAGG+TGG	0.590229	8:-6870196	MsG0880042305.01.T01:CDS
TCCTGGAAGCAGAGTACAAG+AGG	0.590969	8:-6870329	MsG0880042305.01.T01:CDS
TGTTGCACCTAATGAGGATG+TGG	0.591325	8:-6870228	MsG0880042305.01.T01:CDS
CAATGCCCGAAAATCGAACT+GGG	0.593435	8:+6872727	None:intergenic
AGGACTAAGATGACTAGTGA+AGG	0.594509	8:-6872601	MsG0880042305.01.T01:CDS
GGAATCACCGGAAACCTCGC+CGG	0.595060	8:+6872794	None:intergenic
ACTGCTCAATCAATGAATGG+AGG	0.611797	8:-6870836	MsG0880042305.01.T01:CDS
CAGGCCAGGCCACCTTTGAA+CGG	0.612512	8:+6870187	None:intergenic
TCAACTGTTAATACAACATG+AGG	0.618454	8:+6871410	None:intergenic
TCATTCTGGGCATGGAAAGG+AGG	0.620432	8:-6871189	MsG0880042305.01.T01:CDS
GCTACATAATGAAAATGTGC+CGG	0.636883	8:+6871216	None:intergenic
ACATTGATTCTATACAAATG+TGG	0.647034	8:+6872520	None:intergenic
GAGGCACCTCATGTTTCCTG+AGG	0.652123	8:+6870790	None:intergenic
CAAGACAGGATGTCCAACAA+AGG	0.669228	8:+6871068	None:intergenic
AGACTTCCTCAGGAAACATG+AGG	0.696129	8:-6870796	MsG0880042305.01.T01:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTTAAATATGCATTTTT+TGG	+	Chr8:6870842-6870861	None:intergenic	10.0%
!!!	TATGAATTTATTTTTTTTTC+TGG	-	Chr8:6872315-6872334	MsG0880042305.01.T01:intron	10.0%
!!	TTCTGTAAATTATTTGAAAA+TGG	-	Chr8:6870337-6870356	MsG0880042305.01.T01:CDS	15.0%
!!!	ACTGTATTTATGTTTTTTTA+TGG	-	Chr8:6871266-6871285	MsG0880042305.01.T01:intron	15.0%
!!!	CTTTAAAAAGAATCAAAATA+AGG	+	Chr8:6871501-6871520	None:intergenic	15.0%
!!	AAGAATCAAAATAAGGTTAA+AGG	+	Chr8:6871494-6871513	None:intergenic	20.0%
!!	GAAAATAAGAATTTATGCAT+AGG	-	Chr8:6870726-6870745	MsG0880042305.01.T01:intron	20.0%
!!	GATAAAATTTGTAGATTGAA+TGG	-	Chr8:6871910-6871929	MsG0880042305.01.T01:intron	20.0%
!!	TAAGCTATAATAGAATGTTA+TGG	+	Chr8:6871454-6871473	None:intergenic	20.0%
!!!	CTTATCACTTTAACTTTAAA+AGG	-	Chr8:6872639-6872658	MsG0880042305.01.T01:intron	20.0%
!!!	TAAAACATGTTTTGATTTTC+AGG	-	Chr8:6871538-6871557	MsG0880042305.01.T01:intron	20.0%
!	AAAAATGCTAACTAAGAATG+AGG	+	Chr8:6872075-6872094	None:intergenic	25.0%
!	AGTAGTTATCAAGTACTATA+GGG	+	Chr8:6871371-6871390	None:intergenic	25.0%
!	ATTAAGCTGTTTATCCAAAT+AGG	-	Chr8:6871344-6871363	MsG0880042305.01.T01:intron	25.0%
!	GAATTGAATTGTCACAAAAA+AGG	+	Chr8:6872412-6872431	None:intergenic	25.0%
!	TAGTAGTTATCAAGTACTAT+AGG	+	Chr8:6871372-6871391	None:intergenic	25.0%
!	TCTATTATAGCTTAGTGTTT+GGG	-	Chr8:6871460-6871479	MsG0880042305.01.T01:intron	25.0%
!	TGTCTTAAAATGAACCAAAT+AGG	-	Chr8:6871071-6871090	MsG0880042305.01.T01:CDS	25.0%
!	TTAAGCTGTTTATCCAAATA+GGG	-	Chr8:6871345-6871364	MsG0880042305.01.T01:intron	25.0%
!	TTCAAACTACAATAAACTTC+AGG	+	Chr8:6872540-6872559	None:intergenic	25.0%
!	TTCTATTATAGCTTAGTGTT+TGG	-	Chr8:6871459-6871478	MsG0880042305.01.T01:intron	25.0%
!!	CTACAAATTTTATCCTCATT+TGG	+	Chr8:6871904-6871923	None:intergenic	25.0%
!!	GTATTAACAGTTGATTCTAA+GGG	-	Chr8:6871611-6871630	MsG0880042305.01.T01:intron	25.0%
!!	TAAACTTCAGGTTCAAAATT+TGG	+	Chr8:6872528-6872547	None:intergenic	25.0%
!!	TGTATTAACAGTTGATTCTA+AGG	-	Chr8:6871610-6871629	MsG0880042305.01.T01:intron	25.0%
!!!	AATTTTCAGCTATTTTCCAT+AGG	+	Chr8:6871007-6871026	None:intergenic	25.0%
!!!	ACATTGATTCTATACAAATG+TGG	+	Chr8:6870495-6870514	None:intergenic	25.0%
!!!	AGTTTTGAAATGTTAAGCAT+GGG	+	Chr8:6872365-6872384	None:intergenic	25.0%
!!!	CATAGGTTGTTTTACAAAAT+TGG	-	Chr8:6870743-6870762	MsG0880042305.01.T01:intron	25.0%
!!!	TAGTTTTGAAATGTTAAGCA+TGG	+	Chr8:6872366-6872385	None:intergenic	25.0%
!!!	TTGTTTTACATATGCTTTCT+TGG	-	Chr8:6870977-6870996	MsG0880042305.01.T01:intron	25.0%
	AAATTGGATTCCATGTACTT+AGG	-	Chr8:6870759-6870778	MsG0880042305.01.T01:intron	30.0%
	ACATTGTTAGTGTTCTGTTT+GGG	-	Chr8:6870534-6870553	MsG0880042305.01.T01:intron	30.0%
	AGATGTTATGGAGTTGAATT+TGG	-	Chr8:6871969-6871988	MsG0880042305.01.T01:intron	30.0%
	AGCTCACATACTTATCTTTA+AGG	-	Chr8:6872286-6872305	MsG0880042305.01.T01:intron	30.0%
	ATCACTGAGATATCTTCAAT+AGG	+	Chr8:6870453-6870472	None:intergenic	30.0%
	ATTGAAGATATCTCAGTGAT+GGG	-	Chr8:6870453-6870472	MsG0880042305.01.T01:intron	30.0%
	CTAAAAACAGCTTAAGAACA+TGG	+	Chr8:6871196-6871215	None:intergenic	30.0%
	CTATTATAGCTTAGTGTTTG+GGG	-	Chr8:6871461-6871480	MsG0880042305.01.T01:intron	30.0%
	TACAGAAGAGCAATAAAAGA+AGG	+	Chr8:6870324-6870343	None:intergenic	30.0%
	TACATTGTTAGTGTTCTGTT+TGG	-	Chr8:6870533-6870552	MsG0880042305.01.T01:intron	30.0%
	TATTGAAGATATCTCAGTGA+TGG	-	Chr8:6870452-6870471	MsG0880042305.01.T01:intron	30.0%
	TCAACTGTTAATACAACATG+AGG	+	Chr8:6871605-6871624	None:intergenic	30.0%
	TTCAATGTAATCACATGTGT+CGG	-	Chr8:6870639-6870658	MsG0880042305.01.T01:intron	30.0%
!	GTATTGATGTATACAAATGG+TGG	-	Chr8:6871730-6871749	MsG0880042305.01.T01:intron	30.0%
!!	ACTTTATGGTTGAGTTTTGT+CGG	-	Chr8:6872120-6872139	MsG0880042305.01.T01:intron	30.0%
!!	ATTCTAAGGGCTTTTCTTTT+CGG	-	Chr8:6871624-6871643	MsG0880042305.01.T01:intron	30.0%
!!	GAGAGTGTTTAATTTGTTTC+AGG	-	Chr8:6870391-6870410	MsG0880042305.01.T01:intron	30.0%
!!	GAGGTATTGATGTATACAAA+TGG	-	Chr8:6871727-6871746	MsG0880042305.01.T01:intron	30.0%
!!	GGCTTTTACATAGTTACTTT+TGG	+	Chr8:6872344-6872363	None:intergenic	30.0%
!!!	CTTTTTAAAGCTTGTGTTGT+GGG	-	Chr8:6871511-6871530	MsG0880042305.01.T01:intron	30.0%
!!!	CTTTTTTTCATAAGCTATCC+TGG	+	Chr8:6871237-6871256	None:intergenic	30.0%
!!!	TCTTTTTAAAGCTTGTGTTG+TGG	-	Chr8:6871510-6871529	MsG0880042305.01.T01:intron	30.0%
!!!	TTTTCCAATTTAGAAGTACC+TGG	+	Chr8:6872247-6872266	None:intergenic	30.0%
	AAGATAAGTATGTGAGCTTG+TGG	+	Chr8:6872284-6872303	None:intergenic	35.0%
	AAGCACTTGTGAAACTGTTT+GGG	-	Chr8:6871148-6871167	MsG0880042305.01.T01:CDS	35.0%
	AATTAATGTACCTGCAGTGA+TGG	-	Chr8:6871678-6871697	MsG0880042305.01.T01:intron	35.0%
	ACTAAGTAGGGTCAATTACA+TGG	-	Chr8:6871417-6871436	MsG0880042305.01.T01:CDS	35.0%
	ACTCAACCATAAAGTTCAAC+TGG	+	Chr8:6872115-6872134	None:intergenic	35.0%
	ATGTAATTGACCCTACTTAG+TGG	+	Chr8:6871418-6871437	None:intergenic	35.0%
	ATGTGGAAAACTTCATTGCT+GGG	-	Chr8:6872801-6872820	MsG0880042305.01.T01:CDS	35.0%
	ATTATGTAGCACCATCATTC+TGG	-	Chr8:6871809-6871828	MsG0880042305.01.T01:intron	35.0%
	ATTGCTTTCTTTCTCTTGTG+TGG	-	Chr8:6872474-6872493	MsG0880042305.01.T01:intron	35.0%
	GCTACATAATGAAAATGTGC+CGG	+	Chr8:6871799-6871818	None:intergenic	35.0%
	TAAGCACTTGTGAAACTGTT+TGG	-	Chr8:6871147-6871166	MsG0880042305.01.T01:CDS	35.0%
	TGACTATATCTAGCTGCAAA+AGG	+	Chr8:6871760-6871779	None:intergenic	35.0%
	TGCATAGTGTGTCTAGAAAA+TGG	+	Chr8:6872582-6872601	None:intergenic	35.0%
	TGTAATTGACCCTACTTAGT+GGG	+	Chr8:6871417-6871436	None:intergenic	35.0%
	TGTTCTGTTTGGGAATTAGT+GGG	-	Chr8:6870544-6870563	MsG0880042305.01.T01:intron	35.0%
	TTATGTAGCACCATCATTCT+GGG	-	Chr8:6871810-6871829	MsG0880042305.01.T01:intron	35.0%
	TTCCATCTTCGCTAATACAA+TGG	-	Chr8:6872718-6872737	MsG0880042305.01.T01:intron	35.0%
	TTCCATTGTATTAGCGAAGA+TGG	+	Chr8:6872723-6872742	None:intergenic	35.0%
	TTTGGACCTTTGTTCTTGAT+CGG	+	Chr8:6870824-6870843	None:intergenic	35.0%
!	AAGTTTTCCACATCCTCATT+AGG	+	Chr8:6872794-6872813	None:intergenic	35.0%
!	ATATCTCAGTGATGGGAATT+TGG	-	Chr8:6870460-6870479	MsG0880042305.01.T01:intron	35.0%
!	CACACTTTCATTAGAAGTGT+TGG	-	Chr8:6870694-6870713	MsG0880042305.01.T01:intron	35.0%
!	CTTCTAATGAAAGTGTGACT+CGG	+	Chr8:6870691-6870710	None:intergenic	35.0%
!	TATCTCAGTGATGGGAATTT+GGG	-	Chr8:6870461-6870480	MsG0880042305.01.T01:intron	35.0%
!!	GTTGTGGATTTGCTATTTAG+AGG	-	Chr8:6871708-6871727	MsG0880042305.01.T01:intron	35.0%
!!	TTTAGGGTTTTCATTGTTGC+CGG	-	Chr8:6870199-6870218	MsG0880042305.01.T01:CDS	35.0%
	AAGACCTATCCCACTAAGTA+GGG	-	Chr8:6871405-6871424	MsG0880042305.01.T01:CDS	40.0%
	AAGCACGTATTCACACATTC+GGG	-	Chr8:6870784-6870803	MsG0880042305.01.T01:intron	40.0%
	AAGTACTATAGGGCCCTATT+TGG	+	Chr8:6871361-6871380	None:intergenic	40.0%
	AAGTGCTTATGCCAGTAGAT+AGG	+	Chr8:6871136-6871155	None:intergenic	40.0%
	ACAATCACGCATTCGAACAT+TGG	+	Chr8:6870924-6870943	None:intergenic	40.0%
	ACTGCTCAATCAATGAATGG+AGG	-	Chr8:6872176-6872195	MsG0880042305.01.T01:intron	40.0%
	AGGAAGCAAGCTAATAACAG+TGG	+	Chr8:6872667-6872686	None:intergenic	40.0%
	AGGACTAAGATGACTAGTGA+AGG	-	Chr8:6870411-6870430	MsG0880042305.01.T01:intron	40.0%
	ATAGGCTCAAATAAGCCAAC+AGG	+	Chr8:6871118-6871137	None:intergenic	40.0%
	CAAGCACGTATTCACACATT+CGG	-	Chr8:6870783-6870802	MsG0880042305.01.T01:intron	40.0%
	CCAACTGCTCAATCAATGAA+TGG	-	Chr8:6872173-6872192	MsG0880042305.01.T01:intron	40.0%
	CCATAAAGTTCAACTGGACA+AGG	+	Chr8:6872109-6872128	None:intergenic	40.0%
	CCTTGTCCAGTTGAACTTTA+TGG	-	Chr8:6872106-6872125	MsG0880042305.01.T01:intron	40.0%
	CTGCTCAATCAATGAATGGA+GGG	-	Chr8:6872177-6872196	MsG0880042305.01.T01:intron	40.0%
	CTTATTTCGATAAGCTCTCC+AGG	-	Chr8:6871216-6871235	MsG0880042305.01.T01:CDS	40.0%
	CTTTCATGTTGCACCTAATG+AGG	-	Chr8:6872778-6872797	MsG0880042305.01.T01:CDS	40.0%
	GAATTTGGACAGTGTCTTGA+TGG	-	Chr8:6870890-6870909	MsG0880042305.01.T01:intron	40.0%
	GATGTGGAAAACTTCATTGC+TGG	-	Chr8:6872800-6872819	MsG0880042305.01.T01:CDS	40.0%
	GCTTATTTGAGCCTATCTAC+TGG	-	Chr8:6871122-6871141	MsG0880042305.01.T01:CDS	40.0%
	GGATTATCTGCAACCTTTGT+TGG	-	Chr8:6871931-6871950	MsG0880042305.01.T01:intron	40.0%
	GGTGTTTGGAAAAGCCTATT+TGG	+	Chr8:6871088-6871107	None:intergenic	40.0%
	GTGTTCTGTTTGGGAATTAG+TGG	-	Chr8:6870543-6870562	MsG0880042305.01.T01:intron	40.0%
	GTTCTGCATACTTCCAAATG+AGG	-	Chr8:6871888-6871907	MsG0880042305.01.T01:intron	40.0%
	GTTCTGTTTGGGAATTAGTG+GGG	-	Chr8:6870545-6870564	MsG0880042305.01.T01:intron	40.0%
	TAAGATACCCGAGCTGAATT+TGG	-	Chr8:6870875-6870894	MsG0880042305.01.T01:intron	40.0%
	TCCATAACATCTTCCAAGAC+AGG	+	Chr8:6871961-6871980	None:intergenic	40.0%
	TCCTGTCTTGGAAGATGTTA+TGG	-	Chr8:6871957-6871976	MsG0880042305.01.T01:intron	40.0%
	TGAAAGACAGTCGTCAATTG+TGG	+	Chr8:6872764-6872783	None:intergenic	40.0%
	TGCAAGAGATGGCGAATTTA+GGG	-	Chr8:6870183-6870202	MsG0880042305.01.T01:CDS	40.0%
!	AACAGATTTTCCATCACTGC+AGG	+	Chr8:6871691-6871710	None:intergenic	40.0%
!	CAGTGATGGAAAATCTGTTG+TGG	-	Chr8:6871692-6871711	MsG0880042305.01.T01:intron	40.0%
!	CCATTCATTGATTGAGCAGT+TGG	+	Chr8:6872176-6872195	None:intergenic	40.0%
!	TCCTTTCCCAGTTCGATTTT+CGG	-	Chr8:6870279-6870298	MsG0880042305.01.T01:CDS	40.0%
!!	ACTGTTATTAGCTTGCTTCC+TGG	-	Chr8:6872666-6872685	MsG0880042305.01.T01:intron	40.0%
!!	TCCAATTTAGAAGTACCTGG+AGG	+	Chr8:6872244-6872263	None:intergenic	40.0%
!!!	CGGTTTTTGAAACAGCTAAG+AGG	-	Chr8:6871644-6871663	MsG0880042305.01.T01:intron	40.0%
	ACACTGTCCAAATTCAGCTC+GGG	+	Chr8:6870885-6870904	None:intergenic	45.0%
	ACGAGAAGCAATGGAATCAC+CGG	+	Chr8:6870233-6870252	None:intergenic	45.0%
	ACGTGCTTGTCCTAAGTACA+TGG	+	Chr8:6870772-6870791	None:intergenic	45.0%
	AGACTTCCTCAGGAAACATG+AGG	-	Chr8:6872216-6872235	MsG0880042305.01.T01:intron	45.0%
	AGCACGTATTCACACATTCG+GGG	-	Chr8:6870785-6870804	MsG0880042305.01.T01:intron	45.0%
	ATCAATGAATGGAGGGCTGA+AGG	-	Chr8:6872184-6872203	MsG0880042305.01.T01:intron	45.0%
	ATGCTTTCTTGGAGAGCCTA+TGG	-	Chr8:6870988-6871007	MsG0880042305.01.T01:intron	45.0%
	CAAGACAGGATGTCCAACAA+AGG	+	Chr8:6871947-6871966	None:intergenic	45.0%
	CAAGACCTATCCCACTAAGT+AGG	-	Chr8:6871404-6871423	MsG0880042305.01.T01:CDS	45.0%
	CAATGCCCGAAAATCGAACT+GGG	+	Chr8:6870288-6870307	None:intergenic	45.0%
	CATGGAAAGGAGGTGAAGAA+AGG	-	Chr8:6871833-6871852	MsG0880042305.01.T01:intron	45.0%
	CTACTTAGTGGGATAGGTCT+TGG	+	Chr8:6871406-6871425	None:intergenic	45.0%
	CTGCAAGAGATGGCGAATTT+AGG	-	Chr8:6870182-6870201	MsG0880042305.01.T01:CDS	45.0%
	CTTTGTTGGACATCCTGTCT+TGG	-	Chr8:6871945-6871964	MsG0880042305.01.T01:intron	45.0%
	GAAATGGTGAAGACTTCCTC+AGG	-	Chr8:6872206-6872225	MsG0880042305.01.T01:intron	45.0%
	GACACTGTCCAAATTCAGCT+CGG	+	Chr8:6870886-6870905	None:intergenic	45.0%
	GACCTTTGTTCTTGATCGGA+CGG	+	Chr8:6870820-6870839	None:intergenic	45.0%
	GCCTCCAGGTACTTCTAAAT+TGG	-	Chr8:6872240-6872259	MsG0880042305.01.T01:intron	45.0%
	GTGTACTTCGCTTGACTACA+GGG	-	Chr8:6870942-6870961	MsG0880042305.01.T01:intron	45.0%
	TATTCACACATTCGGGGCAT+TGG	-	Chr8:6870791-6870810	MsG0880042305.01.T01:intron	45.0%
	TCAGCAAAAGTTGCATTCGC+CGG	-	Chr8:6871777-6871796	MsG0880042305.01.T01:intron	45.0%
	TGAAGAAAGGCTTAGAGGAC+TGG	-	Chr8:6871846-6871865	MsG0880042305.01.T01:intron	45.0%
	TGGACAGTGTCTTGATGGAA+TGG	-	Chr8:6870895-6870914	MsG0880042305.01.T01:intron	45.0%
	TGTGTACTTCGCTTGACTAC+AGG	-	Chr8:6870941-6870960	MsG0880042305.01.T01:intron	45.0%
	TGTTGCACCTAATGAGGATG+TGG	-	Chr8:6872784-6872803	MsG0880042305.01.T01:CDS	45.0%
	TTCCATTGCTTCTCGTCTCA+TGG	-	Chr8:6870237-6870256	MsG0880042305.01.T01:CDS	45.0%
	TTGACCCTACTTAGTGGGAT+AGG	+	Chr8:6871412-6871431	None:intergenic	45.0%
!	AGGCTTTTCCAAACACCTCT+AGG	-	Chr8:6871091-6871110	MsG0880042305.01.T01:CDS	45.0%
!	CCTTTCCCAGTTCGATTTTC+GGG	-	Chr8:6870280-6870299	MsG0880042305.01.T01:CDS	45.0%
!	GGCTTTTCCAAACACCTCTA+GGG	-	Chr8:6871092-6871111	MsG0880042305.01.T01:CDS	45.0%
!	GTAATCACATGTGTCGGTGT+CGG	-	Chr8:6870645-6870664	MsG0880042305.01.T01:intron	45.0%
!	TAGAGGACTGGCAGAATTTG+TGG	-	Chr8:6871858-6871877	MsG0880042305.01.T01:intron	45.0%
!!!	TTCGATTTTCGGGCATTGGA+GGG	-	Chr8:6870290-6870309	MsG0880042305.01.T01:CDS	45.0%
	AATAAGCCAACAGGCCCTAG+AGG	+	Chr8:6871109-6871128	None:intergenic	50.0%
	ACCTCTTGTACTCTGCTTCC+AGG	+	Chr8:6872687-6872706	None:intergenic	50.0%
	AGCCATGAGACGAGAAGCAA+TGG	+	Chr8:6870242-6870261	None:intergenic	50.0%
	AGCCGTCCGATCAAGAACAA+AGG	-	Chr8:6870815-6870834	MsG0880042305.01.T01:CDS	50.0%
	CCAATGCCCGAAAATCGAAC+TGG	+	Chr8:6870289-6870308	None:intergenic	50.0%
	CCATCATTCTGGGCATGGAA+AGG	-	Chr8:6871820-6871839	MsG0880042305.01.T01:intron	50.0%
	CCCGAAAATCGAACTGGGAA+AGG	+	Chr8:6870283-6870302	None:intergenic	50.0%
	CCTTTCCATGCCCAGAATGA+TGG	+	Chr8:6871823-6871842	None:intergenic	50.0%
	GAATGGAGGGCTGAAGGAAA+TGG	-	Chr8:6872190-6872209	MsG0880042305.01.T01:intron	50.0%
	GCAGAGTACAAGAGGTCAGT+CGG	-	Chr8:6872691-6872710	MsG0880042305.01.T01:intron	50.0%
	GGAGGTGAAGAAAGGCTTAG+AGG	-	Chr8:6871841-6871860	MsG0880042305.01.T01:intron	50.0%
	TAGCACCATCATTCTGGGCA+TGG	-	Chr8:6871815-6871834	MsG0880042305.01.T01:intron	50.0%
	TCATTCTGGGCATGGAAAGG+AGG	-	Chr8:6871823-6871842	MsG0880042305.01.T01:intron	50.0%
	TCATTGCTGGGACCGTTCAA+AGG	-	Chr8:6872813-6872832	MsG0880042305.01.T01:CDS	50.0%
	TCCTGGAAGCAGAGTACAAG+AGG	-	Chr8:6872683-6872702	MsG0880042305.01.T01:intron	50.0%
!!	CCAGTTCGATTTTCGGGCAT+TGG	-	Chr8:6870286-6870305	MsG0880042305.01.T01:CDS	50.0%
!!!	GTTCGATTTTCGGGCATTGG+AGG	-	Chr8:6870289-6870308	MsG0880042305.01.T01:CDS	50.0%
	ATTGTTGCCGGCGAGGTTTC+CGG	-	Chr8:6870211-6870230	MsG0880042305.01.T01:CDS	55.0%
	TTGCTGGGACCGTTCAAAGG+TGG	-	Chr8:6872816-6872835	MsG0880042305.01.T01:CDS	55.0%
!	AGGAAACATGAGGTGCCTCC+AGG	-	Chr8:6872226-6872245	MsG0880042305.01.T01:intron	55.0%
!	GAGGCACCTCATGTTTCCTG+AGG	+	Chr8:6872225-6872244	None:intergenic	55.0%
!	GGTTTTCATTGTTGCCGGCG+AGG	-	Chr8:6870204-6870223	MsG0880042305.01.T01:CDS	55.0%
!!	CAAACACCTCTAGGGCCTGT+TGG	-	Chr8:6871100-6871119	MsG0880042305.01.T01:CDS	55.0%
!!	CAACAGGCCCTAGAGGTGTT+TGG	+	Chr8:6871102-6871121	None:intergenic	55.0%
	CAGGCCAGGCCACCTTTGAA+CGG	+	Chr8:6872828-6872847	None:intergenic	60.0%
	GGAATCACCGGAAACCTCGC+CGG	+	Chr8:6870221-6870240	None:intergenic	60.0%
	GGGACCGTTCAAAGGTGGCC+TGG	-	Chr8:6872821-6872840	MsG0880042305.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	6870178	6872856	6870178	ID=MsG0880042305.01;Name=MsG0880042305.01
Chr8	mRNA	6870178	6872856	6870178	ID=MsG0880042305.01.T01;Parent=MsG0880042305.01;Name=MsG0880042305.01.T01;_AED=0.41;_eAED=0.42;_QI=0\|0\|0\|1\|1\|1\|6\|0\|270
Chr8	exon	6872723	6872856	6872723	ID=MsG0880042305.01.T01:exon:1832;Parent=MsG0880042305.01.T01
Chr8	exon	6872522	6872621	6872522	ID=MsG0880042305.01.T01:exon:1831;Parent=MsG0880042305.01.T01
Chr8	exon	6871369	6871474	6871369	ID=MsG0880042305.01.T01:exon:1830;Parent=MsG0880042305.01.T01
Chr8	exon	6871044	6871267	6871044	ID=MsG0880042305.01.T01:exon:1829;Parent=MsG0880042305.01.T01
Chr8	exon	6870797	6870865	6870797	ID=MsG0880042305.01.T01:exon:1828;Parent=MsG0880042305.01.T01
Chr8	exon	6870178	6870357	6870178	ID=MsG0880042305.01.T01:exon:1827;Parent=MsG0880042305.01.T01
Chr8	CDS	6872723	6872856	6872723	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01
Chr8	CDS	6872522	6872621	6872522	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01
Chr8	CDS	6871369	6871474	6871369	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01
Chr8	CDS	6871044	6871267	6871044	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01
Chr8	CDS	6870797	6870865	6870797	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01
Chr8	CDS	6870178	6870357	6870178	ID=MsG0880042305.01.T01:cds;Parent=MsG0880042305.01.T01

Gene Sequence

>MsG0880042305.01.T01

ATGGCTGCAAGAGATGGCGAATTTAGGGTTTTCATTGTTGCCGGCGAGGTTTCCGGTGATTCCATTGCTTCTCGTCTCATGGCTTCGCTTAAGCTTCTCTCTCCTTTCCCAGTTCGATTTTCGGGCATTGGAGGGACTAAGATGACTAGTGAAGGATTGAAATCTTTGTTTCCTATTGAAGATATCTCAGTGATGGGAATTTGGGAATTATTGCCACATTTGTATAGAATCAATGTGAGACTGAATGAAGCTGTAAGCAAAGCTTCTTTATTTGAGCCTCATGTTGTATTAACAGTTGATTCTAAGGGCTTTTCTTTTCGGTTTTTGAAACAGCTAAGAGCTAGATATAGTCAGCAAAAGTTGCATTCGCCGGCACATTTTCATTATGTAGCACCATCATTCTGGGCATGGAAAGGAGGTGAAGAAAGGCTTAGAGGACTGGCAGAATTTGTGGATCATTTGTTCTGCATACTTCCAAATGAGGATAAAATTTGTAGATTGAATGGATTATCTGCAACCTTTGTTGGACATCCTGTCTTGGAAGATGTTATGGAGTTGAATTTGAGAACCAACTGCTCAATCAATGAATGGAGGGCTGAAGGAAATGGTGAAGACTTCCTCAGGAAACATGAGCTTGCTTCCTGGAAGCAGAGTACAAGAGGTCAGTCGGATGCTTCCATCTTCGCTAATACAATGGAACTACTGAAAGACAATGTTCCACAATTGACGACTGTCTTTCATGTTGCACCTAATGAGGATGTGGAAAACTTCATTGCTGGGACCGTTCAAAGGTGGCCTGGCCTGCTGTATTGA

Protein sequence

>MsG0880042305.01.T01

MAARDGEFRVFIVAGEVSGDSIASRLMASLKLLSPFPVRFSGIGGTKMTSEGLKSLFPIEDISVMGIWELLPHLYRINVRLNEAVSKASLFEPHVVLTVDSKGFSFRFLKQLRARYSQQKLHSPAHFHYVAPSFWAWKGGEERLRGLAEFVDHLFCILPNEDKICRLNGLSATFVGHPVLEDVMELNLRTNCSINEWRAEGNGEDFLRKHELASWKQSTRGQSDASIFANTMELLKDNVPQLTTVFHVAPNEDVENFIAGTVQRWPGLLY*