Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024494.01.T01 | XP_024640230.1 | 82.203 | 118 | 5 | 2 | 1 | 117 | 1 | 103 | 1.06E-58 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024494.01.T01 | G7JVZ5 | 82.203 | 118 | 5 | 2 | 1 | 117 | 1 | 103 | 5.07e-59 | 192 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047957.01 | MsG0580024494.01 | 0.807095 | 5.976678e-50 | 3.299256e-47 |
| MsG0080047959.01 | MsG0580024494.01 | 0.805387 | 1.367911e-49 | 7.227418e-47 |
| MsG0080048464.01 | MsG0580024494.01 | 0.807386 | 5.184796e-50 | 2.883946e-47 |
| MsG0080048683.01 | MsG0580024494.01 | 0.852707 | 3.868899e-61 | 8.154421e-58 |
| MsG0080048849.01 | MsG0580024494.01 | 0.829162 | 6.005503e-55 | 6.097149e-52 |
| MsG0180000008.01 | MsG0580024494.01 | 0.813947 | 1.977826e-51 | 1.309489e-48 |
| MsG0180000091.01 | MsG0580024494.01 | 0.823488 | 1.348303e-53 | 1.162599e-50 |
| MsG0180000470.01 | MsG0580024494.01 | 0.828994 | 6.596608e-55 | 6.663342e-52 |
| MsG0180000546.01 | MsG0580024494.01 | 0.800728 | 1.257984e-48 | 5.900664e-46 |
| MsG0180000649.01 | MsG0580024494.01 | 0.809123 | 2.210557e-50 | 1.287053e-47 |
| MsG0180000650.01 | MsG0580024494.01 | 0.807912 | 4.008803e-50 | 2.260457e-47 |
| MsG0180000814.01 | MsG0580024494.01 | 0.800664 | 1.296298e-48 | 6.070665e-46 |
| MsG0180000828.01 | MsG0580024494.01 | 0.802017 | 6.849075e-49 | 3.319190e-46 |
| MsG0180001088.01 | MsG0580024494.01 | 0.854094 | 1.547199e-61 | 3.417157e-58 |
| MsG0180001141.01 | MsG0580024494.01 | 0.820324 | 7.283400e-53 | 5.744628e-50 |
| MsG0180001149.01 | MsG0580024494.01 | 0.824633 | 7.261515e-54 | 6.469070e-51 |
| MsG0180001971.01 | MsG0580024494.01 | 0.829356 | 5.390474e-55 | 5.504391e-52 |
| MsG0180003189.01 | MsG0580024494.01 | 0.866870 | 2.077206e-65 | 7.109550e-62 |
| MsG0180003357.01 | MsG0580024494.01 | 0.808443 | 3.089726e-50 | 1.766932e-47 |
| MsG0180003673.01 | MsG0580024494.01 | 0.821763 | 3.397141e-53 | 2.789110e-50 |
| MsG0180003686.01 | MsG0580024494.01 | 0.812311 | 4.519520e-51 | 2.863811e-48 |
| MsG0180003854.01 | MsG0580024494.01 | 0.812218 | 4.735804e-51 | 2.993453e-48 |
| MsG0180004025.01 | MsG0580024494.01 | 0.855169 | 7.557197e-62 | 1.729025e-58 |
| MsG0180004765.01 | MsG0580024494.01 | 0.838295 | 3.130038e-57 | 4.173651e-54 |
| MsG0180004926.01 | MsG0580024494.01 | 0.821149 | 4.706553e-53 | 3.798469e-50 |
| MsG0180004997.01 | MsG0580024494.01 | 0.829118 | 6.155189e-55 | 6.240667e-52 |
| MsG0180005279.01 | MsG0580024494.01 | 0.804750 | 1.859213e-49 | 9.664350e-47 |
| MsG0180005730.01 | MsG0580024494.01 | 0.852085 | 5.819444e-61 | 1.202432e-57 |
| MsG0180005732.01 | MsG0580024494.01 | 0.849515 | 3.076789e-60 | 5.847026e-57 |
| MsG0180005960.01 | MsG0580024494.01 | 0.803429 | 3.500782e-49 | 1.758833e-46 |
| MsG0180006054.01 | MsG0580024494.01 | 0.827505 | 1.507595e-54 | 1.458272e-51 |
| MsG0180006055.01 | MsG0580024494.01 | 0.810202 | 1.296055e-50 | 7.763828e-48 |
| MsG0180006096.01 | MsG0580024494.01 | 0.831598 | 1.524701e-55 | 1.662537e-52 |
| MsG0180006251.01 | MsG0580024494.01 | 0.823128 | 1.636161e-53 | 1.396606e-50 |
| MsG0280006309.01 | MsG0580024494.01 | 0.821643 | 3.620660e-53 | 2.962531e-50 |
| MsG0280010599.01 | MsG0580024494.01 | 0.813514 | 2.463101e-51 | 1.611857e-48 |
| MsG0280010807.01 | MsG0580024494.01 | 0.813722 | 2.216489e-51 | 1.458689e-48 |
| MsG0280010916.01 | MsG0580024494.01 | 0.850804 | 1.339592e-60 | 2.655844e-57 |
| MsG0280011109.01 | MsG0580024494.01 | 0.805539 | 1.271625e-49 | 6.744737e-47 |
| MsG0280011163.01 | MsG0580024494.01 | 0.837268 | 5.746365e-57 | 7.424603e-54 |
| MsG0280011216.01 | MsG0580024494.01 | 0.807386 | 5.184796e-50 | 2.883946e-47 |
| MsG0280011376.01 | MsG0580024494.01 | 0.828921 | 6.870112e-55 | 6.924868e-52 |
| MsG0280011415.01 | MsG0580024494.01 | 0.816841 | 4.492099e-52 | 3.218376e-49 |
| MsG0380011669.01 | MsG0580024494.01 | 0.819367 | 1.205223e-52 | 9.255556e-50 |
| MsG0380011704.01 | MsG0580024494.01 | 0.822004 | 2.986319e-53 | 2.468738e-50 |
| MsG0380011895.01 | MsG0580024494.01 | 0.830822 | 2.365222e-55 | 2.520299e-52 |
| MsG0380012005.01 | MsG0580024494.01 | 0.867331 | 1.480889e-65 | 5.150956e-62 |
| MsG0380012007.01 | MsG0580024494.01 | 0.816136 | 6.461588e-52 | 4.540955e-49 |
| MsG0380012184.01 | MsG0580024494.01 | 0.803963 | 2.712723e-49 | 1.381755e-46 |
| MsG0380012362.01 | MsG0580024494.01 | 0.829544 | 4.849845e-55 | 4.978840e-52 |
| MsG0380012394.01 | MsG0580024494.01 | 0.814090 | 1.839395e-51 | 1.222584e-48 |
| MsG0380013467.01 | MsG0580024494.01 | 0.814972 | 1.173322e-51 | 7.987107e-49 |
| MsG0380013853.01 | MsG0580024494.01 | 0.833477 | 5.215621e-56 | 6.013215e-53 |
| MsG0380014251.01 | MsG0580024494.01 | 0.809099 | 2.236395e-50 | 1.301276e-47 |
| MsG0380014548.01 | MsG0580024494.01 | 0.822659 | 2.103972e-53 | 1.772214e-50 |
| MsG0380014727.01 | MsG0580024494.01 | 0.853505 | 2.286784e-61 | 4.952419e-58 |
| MsG0380014866.01 | MsG0580024494.01 | 0.823313 | 1.481748e-53 | 1.271299e-50 |
| MsG0480018883.01 | MsG0580024494.01 | 0.831820 | 1.343593e-55 | 1.474847e-52 |
| MsG0480018964.01 | MsG0580024494.01 | 0.831183 | 1.929043e-55 | 2.077443e-52 |
| MsG0480019041.01 | MsG0580024494.01 | 0.803642 | 3.162425e-49 | 1.597543e-46 |
| MsG0480019384.01 | MsG0580024494.01 | 0.838431 | 2.888112e-57 | 3.867622e-54 |
| MsG0480019434.01 | MsG0580024494.01 | 0.801705 | 7.936911e-49 | 3.815966e-46 |
| MsG0480019435.01 | MsG0580024494.01 | 0.825651 | 4.172292e-54 | 3.826221e-51 |
| MsG0480020024.01 | MsG0580024494.01 | 0.878797 | 2.100257e-69 | 1.111302e-65 |
| MsG0480020025.01 | MsG0580024494.01 | 0.831471 | 1.637888e-55 | 1.779236e-52 |
| MsG0480020322.01 | MsG0580024494.01 | 0.827484 | 1.525391e-54 | 1.474627e-51 |
| MsG0480020323.01 | MsG0580024494.01 | 0.837692 | 4.474416e-57 | 5.858587e-54 |
| MsG0480020765.01 | MsG0580024494.01 | 0.807785 | 4.265553e-50 | 2.397388e-47 |
| MsG0480021853.01 | MsG0580024494.01 | 0.804893 | 1.735951e-49 | 9.057386e-47 |
| MsG0480021869.01 | MsG0580024494.01 | 0.837377 | 5.386697e-57 | 6.983546e-54 |
| MsG0480021917.01 | MsG0580024494.01 | 0.811123 | 8.195431e-51 | 5.030968e-48 |
| MsG0480021918.01 | MsG0580024494.01 | 0.811110 | 8.248860e-51 | 5.062134e-48 |
| MsG0480021948.01 | MsG0580024494.01 | 0.804820 | 1.798059e-49 | 9.363355e-47 |
| MsG0480022068.01 | MsG0580024494.01 | 0.815326 | 9.788399e-52 | 6.727986e-49 |
| MsG0480022222.01 | MsG0580024494.01 | 0.806020 | 1.007235e-49 | 5.409253e-47 |
| MsG0480022535.01 | MsG0580024494.01 | 0.827965 | 1.168561e-54 | 1.145673e-51 |
| MsG0480022575.01 | MsG0580024494.01 | 0.800824 | 1.202545e-48 | 5.654307e-46 |
| MsG0480022739.01 | MsG0580024494.01 | -0.811399 | 7.139566e-51 | 4.414979e-48 |
| MsG0480022750.01 | MsG0580024494.01 | 0.835716 | 1.427171e-56 | 1.759859e-53 |
| MsG0480022802.01 | MsG0580024494.01 | 0.800650 | 1.304994e-48 | 6.109229e-46 |
| MsG0480022933.01 | MsG0580024494.01 | 0.808864 | 2.512085e-50 | 1.452447e-47 |
| MsG0480023145.01 | MsG0580024494.01 | 0.813965 | 1.959154e-51 | 1.297824e-48 |
| MsG0480023251.01 | MsG0580024494.01 | 0.836045 | 1.177497e-56 | 1.466502e-53 |
| MsG0480023488.01 | MsG0580024494.01 | 0.806855 | 6.716589e-50 | 3.684939e-47 |
| MsG0480023638.01 | MsG0580024494.01 | 0.829881 | 4.016571e-55 | 4.164697e-52 |
| MsG0480023652.01 | MsG0580024494.01 | 0.815160 | 1.065591e-51 | 7.290550e-49 |
| MsG0480023943.01 | MsG0580024494.01 | 0.802086 | 6.630063e-49 | 3.218743e-46 |
| MsG0580024161.01 | MsG0580024494.01 | 0.801601 | 8.337865e-49 | 3.998035e-46 |
| MsG0580024363.01 | MsG0580024494.01 | -0.852361 | 4.856439e-61 | 1.012267e-57 |
| MsG0580024494.01 | MsG0580024495.01 | 0.884188 | 2.372755e-71 | 1.550561e-67 |
| MsG0580024494.01 | MsG0580024775.01 | 0.806725 | 7.154290e-50 | 3.911839e-47 |
| MsG0580024494.01 | MsG0580024935.01 | 0.857235 | 1.874603e-62 | 4.595338e-59 |
| MsG0580024494.01 | MsG0580025448.01 | 0.826051 | 3.353003e-54 | 3.110104e-51 |
| MsG0580024494.01 | MsG0580025467.01 | 0.826367 | 2.820765e-54 | 2.640074e-51 |
| MsG0580024494.01 | MsG0580025621.01 | 0.819171 | 1.336184e-52 | 1.020601e-49 |
| MsG0580024494.01 | MsG0580025832.01 | 0.812560 | 3.987089e-51 | 2.543232e-48 |
| MsG0580024494.01 | MsG0580025843.01 | 0.801628 | 8.233555e-49 | 3.950749e-46 |
| MsG0580024494.01 | MsG0580026032.01 | 0.849237 | 3.678019e-60 | 6.928765e-57 |
| MsG0580024494.01 | MsG0580026086.01 | 0.802732 | 4.878153e-49 | 2.407630e-46 |
| MsG0580024494.01 | MsG0580026270.01 | 0.806466 | 8.115535e-50 | 4.408113e-47 |
| MsG0580024494.01 | MsG0580026340.01 | 0.815836 | 7.537925e-52 | 5.253736e-49 |
| MsG0580024494.01 | MsG0580027922.01 | 0.812748 | 3.627351e-51 | 2.325254e-48 |
| MsG0580024494.01 | MsG0580029008.01 | 0.813440 | 2.556840e-51 | 1.669871e-48 |
| MsG0580024494.01 | MsG0580029355.01 | 0.839016 | 2.038245e-57 | 2.778445e-54 |
| MsG0580024494.01 | MsG0580029376.01 | 0.836709 | 7.984469e-57 | 1.014426e-53 |
| MsG0580024494.01 | MsG0580029429.01 | 0.808737 | 2.673727e-50 | 1.540649e-47 |
| MsG0580024494.01 | MsG0580029879.01 | 0.805608 | 1.229390e-49 | 6.532603e-47 |
| MsG0580024494.01 | MsG0580029880.01 | 0.812270 | 4.613491e-51 | 2.920231e-48 |
| MsG0580024494.01 | MsG0580029925.01 | 0.850588 | 1.541245e-60 | 3.033765e-57 |
| MsG0580024494.01 | MsG0580029999.01 | -0.813191 | 2.899598e-51 | 1.880807e-48 |
| MsG0580024494.01 | MsG0580030142.01 | 0.808062 | 3.723937e-50 | 2.108274e-47 |
| MsG0580024494.01 | MsG0680030415.01 | 0.821088 | 4.862265e-53 | 3.917622e-50 |
| MsG0580024494.01 | MsG0680030616.01 | 0.813207 | 2.877159e-51 | 1.867012e-48 |
| MsG0580024494.01 | MsG0680030636.01 | 0.871374 | 7.176791e-67 | 2.888423e-63 |
| MsG0580024494.01 | MsG0680030880.01 | 0.828948 | 6.768231e-55 | 6.827560e-52 |
| MsG0580024494.01 | MsG0680030992.01 | 0.808623 | 2.827796e-50 | 1.624605e-47 |
| MsG0580024494.01 | MsG0680031334.01 | 0.840220 | 9.912488e-58 | 1.402513e-54 |
| MsG0580024494.01 | MsG0680031377.01 | -0.804324 | 2.282124e-49 | 1.173208e-46 |
| MsG0580024494.01 | MsG0680031561.01 | 0.840168 | 1.022622e-57 | 1.444708e-54 |
| MsG0580024494.01 | MsG0680032058.01 | 0.847088 | 1.442503e-59 | 2.535646e-56 |
| MsG0580024494.01 | MsG0680032460.01 | -0.871408 | 6.989952e-67 | 2.816995e-63 |
| MsG0580024494.01 | MsG0680033459.01 | 0.824296 | 8.717425e-54 | 7.689642e-51 |
| MsG0580024494.01 | MsG0680033465.01 | 0.840150 | 1.034145e-57 | 1.460050e-54 |
| MsG0580024494.01 | MsG0680034235.01 | 0.804678 | 1.924851e-49 | 9.986313e-47 |
| MsG0580024494.01 | MsG0680034451.01 | 0.805174 | 1.515824e-49 | 7.965493e-47 |
| MsG0580024494.01 | MsG0680034782.01 | 0.849556 | 2.997849e-60 | 5.704393e-57 |
| MsG0580024494.01 | MsG0680035005.01 | 0.818296 | 2.111353e-52 | 1.574183e-49 |
| MsG0580024494.01 | MsG0680035707.01 | 0.831298 | 1.806982e-55 | 1.952675e-52 |
| MsG0580024494.01 | MsG0780035948.01 | 0.808876 | 2.496287e-50 | 1.443752e-47 |
| MsG0580024494.01 | MsG0780035957.01 | 0.800774 | 1.231096e-48 | 5.781132e-46 |
| MsG0580024494.01 | MsG0780036128.01 | 0.815482 | 9.037615e-52 | 6.239008e-49 |
| MsG0580024494.01 | MsG0780036190.01 | 0.804087 | 2.555705e-49 | 1.305918e-46 |
| MsG0580024494.01 | MsG0780036705.01 | 0.802917 | 4.468270e-49 | 2.215680e-46 |
| MsG0580024494.01 | MsG0780036978.01 | 0.827442 | 1.560847e-54 | 1.507131e-51 |
| MsG0580024494.01 | MsG0780037082.01 | 0.813987 | 1.938068e-51 | 1.284544e-48 |
| MsG0580024494.01 | MsG0780037105.01 | 0.841911 | 3.566075e-58 | 5.317603e-55 |
| MsG0580024494.01 | MsG0780037330.01 | 0.809744 | 1.626008e-50 | 9.625456e-48 |
| MsG0580024494.01 | MsG0780037512.01 | 0.806483 | 8.049202e-50 | 4.373880e-47 |
| MsG0580024494.01 | MsG0780038092.01 | 0.823633 | 1.246829e-53 | 1.079564e-50 |
| MsG0580024494.01 | MsG0780038833.01 | 0.837489 | 5.043125e-57 | 6.561435e-54 |
| MsG0580024494.01 | MsG0780038906.01 | 0.824645 | 7.215113e-54 | 6.429785e-51 |
| MsG0580024494.01 | MsG0780039143.01 | 0.806437 | 8.230795e-50 | 4.467294e-47 |
| MsG0580024494.01 | MsG0780039178.01 | 0.815065 | 1.118693e-51 | 7.634462e-49 |
| MsG0580024494.01 | MsG0780039429.01 | 0.834641 | 2.664534e-56 | 3.181251e-53 |
| MsG0580024494.01 | MsG0780039438.01 | 0.818955 | 1.496068e-52 | 1.136067e-49 |
| MsG0580024494.01 | MsG0780039631.01 | 0.820674 | 6.053186e-53 | 4.820723e-50 |
| MsG0580024494.01 | MsG0780039867.01 | -0.816994 | 4.149031e-52 | 2.985253e-49 |
| MsG0580024494.01 | MsG0780040177.01 | 0.807293 | 5.425127e-50 | 3.010408e-47 |
| MsG0580024494.01 | MsG0780040576.01 | -0.815053 | 1.125606e-51 | 7.678919e-49 |
| MsG0580024494.01 | MsG0780040596.01 | 0.820797 | 5.672872e-53 | 4.533642e-50 |
| MsG0580024494.01 | MsG0780041015.01 | -0.837978 | 3.778162e-57 | 4.990379e-54 |
| MsG0580024494.01 | MsG0780041080.01 | 0.809471 | 1.861752e-50 | 1.094032e-47 |
| MsG0580024494.01 | MsG0780041187.01 | 0.820276 | 7.471266e-53 | 5.885176e-50 |
| MsG0580024494.01 | MsG0780041387.01 | 0.823805 | 1.136411e-53 | 9.887766e-51 |
| MsG0580024494.01 | MsG0780041491.01 | 0.818102 | 2.334817e-52 | 1.731530e-49 |
| MsG0580024494.01 | MsG0780041729.01 | -0.846840 | 1.686795e-59 | 2.941261e-56 |
| MsG0580024494.01 | MsG0780041747.01 | 0.860900 | 1.496072e-63 | 4.154718e-60 |
| MsG0580024494.01 | MsG0880041852.01 | 0.847824 | 9.055733e-60 | 1.629523e-56 |
| MsG0580024494.01 | MsG0880041861.01 | 0.802432 | 5.627395e-49 | 2.756193e-46 |
| MsG0580024494.01 | MsG0880042022.01 | 0.810640 | 1.042341e-50 | 6.317104e-48 |
| MsG0580024494.01 | MsG0880042161.01 | 0.836789 | 7.618101e-57 | 9.702725e-54 |
| MsG0580024494.01 | MsG0880042305.01 | 0.807030 | 6.167855e-50 | 3.399190e-47 |
| MsG0580024494.01 | MsG0880042434.01 | 0.832271 | 1.039550e-55 | 1.156033e-52 |
| MsG0580024494.01 | MsG0880042560.01 | 0.812808 | 3.518943e-51 | 2.259098e-48 |
| MsG0580024494.01 | MsG0880042576.01 | 0.800453 | 1.430923e-48 | 6.665262e-46 |
| MsG0580024494.01 | MsG0880042622.01 | 0.862611 | 4.484488e-64 | 1.321135e-60 |
| MsG0580024494.01 | MsG0880042656.01 | 0.830543 | 2.768593e-55 | 2.925721e-52 |
| MsG0580024494.01 | MsG0880042700.01 | 0.835275 | 1.844477e-56 | 2.244753e-53 |
| MsG0580024494.01 | MsG0880042743.01 | 0.808941 | 2.418017e-50 | 1.400901e-47 |
| MsG0580024494.01 | MsG0880042794.01 | 0.801822 | 7.511589e-49 | 3.622295e-46 |
| MsG0580024494.01 | MsG0880043157.01 | 0.807415 | 5.111959e-50 | 2.845625e-47 |
| MsG0580024494.01 | MsG0880043454.01 | 0.851445 | 8.835296e-61 | 1.788755e-57 |
| MsG0580024494.01 | MsG0880043521.01 | 0.811720 | 6.079300e-51 | 3.791235e-48 |
| MsG0580024494.01 | MsG0880043867.01 | 0.812074 | 5.089270e-51 | 3.204204e-48 |
| MsG0580024494.01 | MsG0880043941.01 | 0.802694 | 4.967667e-49 | 2.449373e-46 |
| MsG0580024494.01 | MsG0880044573.01 | 0.831853 | 1.318954e-55 | 1.449194e-52 |
| MsG0580024494.01 | MsG0880044728.01 | 0.807807 | 4.219577e-50 | 2.372918e-47 |
| MsG0580024494.01 | MsG0880044892.01 | 0.805054 | 1.606368e-49 | 8.415237e-47 |
| MsG0580024494.01 | MsG0880045111.01 | 0.804104 | 2.535710e-49 | 1.296241e-46 |
| MsG0580024494.01 | MsG0880045362.01 | 0.802611 | 5.168678e-49 | 2.543045e-46 |
| MsG0580024494.01 | MsG0880045371.01 | 0.865052 | 7.806859e-65 | 2.506052e-61 |
| MsG0580024494.01 | MsG0880045387.01 | 0.850846 | 1.303439e-60 | 2.587813e-57 |
| MsG0580024494.01 | MsG0880045765.01 | 0.838563 | 2.669494e-57 | 3.589206e-54 |
| MsG0580024494.01 | MsG0880045783.01 | 0.835211 | 1.914376e-56 | 2.325294e-53 |
| MsG0580024494.01 | MsG0880045926.01 | 0.840477 | 8.494950e-58 | 1.211439e-54 |
| MsG0580024494.01 | MsG0880045992.01 | 0.862025 | 6.784049e-64 | 1.958171e-60 |
| MsG0580024494.01 | MsG0880046930.01 | 0.817363 | 3.427587e-52 | 2.491061e-49 |
| MsG0580024494.01 | MsG0880047045.01 | 0.823952 | 1.050067e-53 | 9.173953e-51 |
| MsG0580024494.01 | MsG0880047046.01 | 0.833250 | 5.940127e-56 | 6.802545e-53 |
| MsG0580024494.01 | MsG0880047052.01 | 0.833879 | 4.138174e-56 | 4.829463e-53 |
| MsG0580024494.01 | MsG0880047294.01 | 0.812146 | 4.910248e-51 | 3.097591e-48 |
| MsG0580024494.01 | MsG0880047481.01 | -0.808347 | 3.238485e-50 | 1.847335e-47 |
| MsG0580024494.01 | MsG0880047696.01 | 0.811256 | 7.667422e-51 | 4.723427e-48 |
| MsG0380014948.01 | MsG0580024494.01 | 0.803474 | 3.425832e-49 | 1.723169e-46 |
| MsG0380015216.01 | MsG0580024494.01 | 0.811867 | 5.648949e-51 | 3.536527e-48 |
| MsG0380015533.01 | MsG0580024494.01 | 0.847144 | 1.392914e-59 | 2.452867e-56 |
| MsG0380015703.01 | MsG0580024494.01 | 0.820041 | 8.456730e-53 | 6.618680e-50 |
| MsG0380015847.01 | MsG0580024494.01 | -0.850468 | 1.665488e-60 | 3.265521e-57 |
| MsG0380015891.01 | MsG0580024494.01 | 0.823117 | 1.646053e-53 | 1.404602e-50 |
| MsG0380015930.01 | MsG0580024494.01 | 0.805300 | 1.426925e-49 | 7.522393e-47 |
| MsG0380015964.01 | MsG0580024494.01 | 0.814627 | 1.399157e-51 | 9.436407e-49 |
| MsG0380015965.01 | MsG0580024494.01 | 0.836426 | 9.424668e-57 | 1.187314e-53 |
| MsG0380016004.01 | MsG0580024494.01 | 0.804541 | 2.055860e-49 | 1.062790e-46 |
| MsG0380016064.01 | MsG0580024494.01 | 0.818269 | 2.140431e-52 | 1.594679e-49 |
| MsG0380016182.01 | MsG0580024494.01 | 0.863265 | 2.815916e-64 | 8.486176e-61 |
| MsG0380016191.01 | MsG0580024494.01 | -0.813988 | 1.936597e-51 | 1.283637e-48 |
| MsG0380016210.01 | MsG0580024494.01 | 0.809269 | 2.056680e-50 | 1.202129e-47 |
| MsG0380016285.01 | MsG0580024494.01 | 0.817655 | 2.947036e-52 | 2.158950e-49 |
| MsG0380016694.01 | MsG0580024494.01 | 0.814727 | 1.329725e-51 | 8.992266e-49 |
| MsG0380016740.01 | MsG0580024494.01 | 0.826729 | 2.312071e-54 | 2.186305e-51 |
| MsG0380017023.01 | MsG0580024494.01 | 0.801982 | 6.963072e-49 | 3.371309e-46 |
| MsG0380017048.01 | MsG0580024494.01 | 0.846075 | 2.726857e-59 | 4.638678e-56 |
| MsG0380017085.01 | MsG0580024494.01 | 0.826504 | 2.616942e-54 | 2.458738e-51 |
| MsG0380017176.01 | MsG0580024494.01 | 0.822630 | 2.137480e-53 | 1.799066e-50 |
| MsG0380017202.01 | MsG0580024494.01 | 0.822131 | 2.791101e-53 | 2.315789e-50 |
| MsG0380017220.01 | MsG0580024494.01 | 0.834772 | 2.469829e-56 | 2.960225e-53 |
| MsG0380017293.01 | MsG0580024494.01 | 0.821102 | 4.826657e-53 | 3.890407e-50 |
| MsG0380017322.01 | MsG0580024494.01 | 0.836828 | 7.445331e-57 | 9.493172e-54 |
| MsG0380017326.01 | MsG0580024494.01 | 0.801180 | 1.016950e-48 | 4.825085e-46 |
| MsG0380017338.01 | MsG0580024494.01 | 0.812068 | 5.107032e-51 | 3.214702e-48 |
| MsG0380017437.01 | MsG0580024494.01 | -0.819930 | 8.968270e-53 | 6.996926e-50 |
| MsG0380017461.01 | MsG0580024494.01 | 0.801330 | 9.472219e-49 | 4.511338e-46 |
| MsG0380017498.01 | MsG0580024494.01 | 0.803209 | 3.888134e-49 | 1.942398e-46 |
| MsG0380017543.01 | MsG0580024494.01 | 0.822824 | 1.926529e-53 | 1.630376e-50 |
| MsG0380017551.01 | MsG0580024494.01 | -0.812787 | 3.556169e-51 | 2.281822e-48 |
| MsG0380017589.01 | MsG0580024494.01 | 0.806187 | 9.292529e-50 | 5.011707e-47 |
| MsG0380017931.01 | MsG0580024494.01 | 0.814079 | 1.848933e-51 | 1.228606e-48 |
| MsG0480018163.01 | MsG0580024494.01 | 0.802994 | 4.307703e-49 | 2.140106e-46 |
| MsG0480018236.01 | MsG0580024494.01 | 0.845427 | 4.089954e-59 | 6.813140e-56 |
| MsG0480018251.01 | MsG0580024494.01 | 0.819706 | 1.008816e-52 | 7.821472e-50 |
| MsG0480018426.01 | MsG0580024494.01 | 0.835611 | 1.517345e-56 | 1.865067e-53 |
| MsG0280006491.01 | MsG0580024494.01 | 0.819804 | 9.581070e-53 | 7.448986e-50 |
| MsG0280006588.01 | MsG0580024494.01 | 0.817605 | 3.024610e-52 | 2.212719e-49 |
| MsG0280006589.01 | MsG0580024494.01 | 0.824657 | 7.167690e-54 | 6.389769e-51 |
| MsG0280006601.01 | MsG0580024494.01 | 0.816063 | 6.709194e-52 | 4.705643e-49 |
| MsG0280006669.01 | MsG0580024494.01 | 0.805091 | 1.577789e-49 | 8.273267e-47 |
| MsG0280006753.01 | MsG0580024494.01 | -0.855902 | 4.617323e-62 | 1.082572e-58 |
| MsG0280007066.01 | MsG0580024494.01 | 0.810975 | 8.822670e-51 | 5.395565e-48 |
| MsG0280007118.01 | MsG0580024494.01 | 0.816414 | 5.597708e-52 | 3.963806e-49 |
| MsG0280007417.01 | MsG0580024494.01 | 0.800605 | 1.332687e-48 | 6.231621e-46 |
| MsG0280007547.01 | MsG0580024494.01 | 0.831714 | 1.427154e-55 | 1.561660e-52 |
| MsG0280007691.01 | MsG0580024494.01 | 0.814770 | 1.300487e-51 | 8.804267e-49 |
| MsG0280007763.01 | MsG0580024494.01 | 0.822193 | 2.700580e-53 | 2.244494e-50 |
| MsG0280007864.01 | MsG0580024494.01 | -0.833397 | 5.460788e-56 | 6.281153e-53 |
| MsG0280008113.01 | MsG0580024494.01 | 0.837742 | 4.343187e-57 | 5.695515e-54 |
| MsG0280008928.01 | MsG0580024494.01 | 0.801481 | 8.823318e-49 | 4.218330e-46 |
| MsG0280008929.01 | MsG0580024494.01 | 0.811171 | 8.001068e-51 | 4.917785e-48 |
| MsG0280009350.01 | MsG0580024494.01 | 0.804419 | 2.179672e-49 | 1.123264e-46 |
| MsG0280010184.01 | MsG0580024494.01 | 0.803797 | 2.937082e-49 | 1.489623e-46 |
| MsG0280010216.01 | MsG0580024494.01 | 0.802675 | 5.011900e-49 | 2.469931e-46 |
| MsG0280010288.01 | MsG0580024494.01 | 0.824468 | 7.939492e-54 | 7.038322e-51 |
| MsG0280010349.01 | MsG0580024494.01 | 0.818639 | 1.764696e-52 | 1.328214e-49 |
| MsG0280010350.01 | MsG0580024494.01 | 0.813354 | 2.670393e-51 | 1.739957e-48 |
| MsG0280010378.01 | MsG0580024494.01 | 0.802272 | 6.070378e-49 | 2.961042e-46 |
| MsG0280010517.01 | MsG0580024494.01 | 0.815418 | 9.337355e-52 | 6.434169e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024494.01.T01 | MTR_5g012120 | 82.203 | 118 | 5 | 2 | 1 | 117 | 1 | 103 | 1.29e-62 | 192 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024494.01.T01 | AT1G04590 | 46.053 | 76 | 23 | 3 | 44 | 118 | 122 | 180 | 3.44e-13 | 64.7 |
| MsG0580024494.01.T01 | AT1G04590 | 46.053 | 76 | 23 | 3 | 44 | 118 | 122 | 180 | 3.56e-13 | 64.7 |
Find 31 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGTTGTGAGAAGAAATT+TGG | 0.218146 | 5:-5545798 | None:intergenic |
| GAAATACCAAAGCATTATAT+TGG | 0.265891 | 5:+5545749 | MsG0580024494.01.T01:CDS |
| GATAGTAAGGAGGCTATTTA+TGG | 0.272982 | 5:+5546169 | MsG0580024494.01.T01:CDS |
| CTCTTGATGCATGGGTTGCT+TGG | 0.290402 | 5:+5546194 | MsG0580024494.01.T01:CDS |
| TATCACGAAGCTGCATCATT+AGG | 0.312015 | 5:-5546135 | None:intergenic |
| AAATACCAAAGCATTATATT+GGG | 0.356702 | 5:+5545750 | MsG0580024494.01.T01:CDS |
| AATGATGCAGCTTCGTGATA+TGG | 0.356783 | 5:+5546138 | MsG0580024494.01.T01:CDS |
| TCTTGATGCATGGGTTGCTT+GGG | 0.383776 | 5:+5546195 | MsG0580024494.01.T01:CDS |
| CTTCGAAATCTTGCTAGAAA+AGG | 0.405557 | 5:-5545275 | None:intergenic |
| ATCACGAAGCTGCATCATTA+GGG | 0.405973 | 5:-5546134 | None:intergenic |
| TTCTCCCCAATATAATGCTT+TGG | 0.412939 | 5:-5545755 | None:intergenic |
| ATATTTCTCAATGAACCAAT+TGG | 0.419484 | 5:-5546228 | None:intergenic |
| TTTATGGTGCTCTTGATGCA+TGG | 0.435289 | 5:+5546185 | MsG0580024494.01.T01:CDS |
| TTATGGTGCTCTTGATGCAT+GGG | 0.444864 | 5:+5546186 | MsG0580024494.01.T01:CDS |
| AGAGAGAACAAGTGAATGAA+GGG | 0.445044 | 5:-5545207 | None:intergenic |
| TTCTCTCCACATTTCACAGC+AGG | 0.446461 | 5:+5545246 | MsG0580024494.01.T01:five_prime_UTR |
| AAGAGAGAACAAGTGAATGA+AGG | 0.452083 | 5:-5545208 | None:intergenic |
| TGTGGAGAGAATAAAAGTTT+CGG | 0.454466 | 5:-5545234 | None:intergenic |
| TTGGGAGCAAAATTTCCAAT+TGG | 0.483107 | 5:+5546213 | MsG0580024494.01.T01:CDS |
| CTACTAGCTTTCTGTTCAGA+AGG | 0.486635 | 5:-5545725 | None:intergenic |
| TATGGATGATACCGATAGTA+AGG | 0.509177 | 5:+5546156 | MsG0580024494.01.T01:CDS |
| TGTCTGCGAATATGATGGTT+GGG | 0.523771 | 5:-5545687 | None:intergenic |
| TTGTCTGCGAATATGATGGT+TGG | 0.577007 | 5:-5545688 | None:intergenic |
| ATAAATAGCCTCCTTACTAT+CGG | 0.582438 | 5:-5546167 | None:intergenic |
| TCTAGCAAGATTTCGAAGCA+AGG | 0.586523 | 5:+5545280 | MsG0580024494.01.T01:five_prime_UTR |
| AAATCGAGGCGATCTCCACA+TGG | 0.619578 | 5:-5545514 | None:intergenic |
| ATCGATCCTGCTGTGAAATG+TGG | 0.619764 | 5:-5545252 | None:intergenic |
| AATACCAAAGCATTATATTG+GGG | 0.621135 | 5:+5545751 | MsG0580024494.01.T01:CDS |
| GGATGATACCGATAGTAAGG+AGG | 0.675030 | 5:+5546159 | MsG0580024494.01.T01:CDS |
| CAAAACAATCAACAACCATG+TGG | 0.714494 | 5:+5545499 | MsG0580024494.01.T01:exon |
| CTTACGAGATACGAAAATCG+AGG | 0.725219 | 5:-5545528 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | Chr5:5545855-5545874 | MsG0580024494.01.T01:intron | 100.0% |
| !! | AAATTCATGAATTGAAATGA+GGG | - | Chr5:5545345-5545364 | None:intergenic | 20.0% |
| !!! | AAATACCAAAGCATTATATT+GGG | + | Chr5:5545750-5545769 | MsG0580024494.01.T01:CDS | 20.0% |
| !!! | TGTTATCCTAGTTTTTTTTT+GGG | + | Chr5:5545835-5545854 | MsG0580024494.01.T01:intron | 20.0% |
| !!! | TTATATTGATAGTTTGAGTA+TGG | + | Chr5:5546074-5546093 | MsG0580024494.01.T01:intron | 20.0% |
| ! | CAAATTCATGAATTGAAATG+AGG | - | Chr5:5545346-5545365 | None:intergenic | 25.0% |
| !! | AATACCAAAGCATTATATTG+GGG | + | Chr5:5545751-5545770 | MsG0580024494.01.T01:CDS | 25.0% |
| !! | GAAATACCAAAGCATTATAT+TGG | + | Chr5:5545749-5545768 | MsG0580024494.01.T01:CDS | 25.0% |
| !!! | ATTTGATTATTTCTGTGTTC+TGG | + | Chr5:5545367-5545386 | MsG0580024494.01.T01:intron | 25.0% |
| !!! | GTGTATTTTTTCTGTTTTTC+AGG | + | Chr5:5545607-5545626 | MsG0580024494.01.T01:intron | 25.0% |
| !!! | GTGTTATCCTAGTTTTTTTT+TGG | + | Chr5:5545834-5545853 | MsG0580024494.01.T01:intron | 25.0% |
| !!! | GTTATCCTAGTTTTTTTTTG+GGG | + | Chr5:5545836-5545855 | MsG0580024494.01.T01:intron | 25.0% |
| !!! | TTATCCTAGTTTTTTTTTGG+GGG | + | Chr5:5545837-5545856 | MsG0580024494.01.T01:intron | 25.0% |
| ATAAATAGCCTCCTTACTAT+CGG | - | Chr5:5546170-5546189 | None:intergenic | 30.0% | |
| ATAAGCTTCAACAACGTTAA+TGG | - | Chr5:5545572-5545591 | None:intergenic | 30.0% | |
| ATACAATTGTTGTGTGTTCT+GGG | + | Chr5:5545396-5545415 | MsG0580024494.01.T01:intron | 30.0% | |
| TACTGTTGTGAGAAGAAATT+TGG | - | Chr5:5545801-5545820 | None:intergenic | 30.0% | |
| TATACAATTGTTGTGTGTTC+TGG | + | Chr5:5545395-5545414 | MsG0580024494.01.T01:intron | 30.0% | |
| TGTGGAGAGAATAAAAGTTT+CGG | - | Chr5:5545237-5545256 | None:intergenic | 30.0% | |
| !!! | TATCCTAGTTTTTTTTTGGG+GGG | + | Chr5:5545838-5545857 | MsG0580024494.01.T01:intron | 30.0% |
| AAGAGAGAACAAGTGAATGA+AGG | - | Chr5:5545211-5545230 | None:intergenic | 35.0% | |
| AGAGAGAACAAGTGAATGAA+GGG | - | Chr5:5545210-5545229 | None:intergenic | 35.0% | |
| ATAGTTTGAGTATGGTGACA+GGG | + | Chr5:5546082-5546101 | MsG0580024494.01.T01:intron | 35.0% | |
| CAAAACAATCAACAACCATG+TGG | + | Chr5:5545499-5545518 | MsG0580024494.01.T01:exon | 35.0% | |
| CTTCGAAATCTTGCTAGAAA+AGG | - | Chr5:5545278-5545297 | None:intergenic | 35.0% | |
| GATAGTAAGGAGGCTATTTA+TGG | + | Chr5:5546169-5546188 | MsG0580024494.01.T01:CDS | 35.0% | |
| TATGGATGATACCGATAGTA+AGG | + | Chr5:5546156-5546175 | MsG0580024494.01.T01:CDS | 35.0% | |
| TTCTCCCCAATATAATGCTT+TGG | - | Chr5:5545758-5545777 | None:intergenic | 35.0% | |
| TTGGGAGCAAAATTTCCAAT+TGG | + | Chr5:5546213-5546232 | MsG0580024494.01.T01:CDS | 35.0% | |
| ! | GATTTTGTCTGCGAATATGA+TGG | - | Chr5:5545695-5545714 | None:intergenic | 35.0% |
| !!! | ATCCTAGTTTTTTTTTGGGG+GGG | + | Chr5:5545839-5545858 | MsG0580024494.01.T01:intron | 35.0% |
| !!! | TGACAGGGGTTTCAATTTTT+TGG | + | Chr5:5546097-5546116 | MsG0580024494.01.T01:intron | 35.0% |
| AATGATGCAGCTTCGTGATA+TGG | + | Chr5:5546138-5546157 | MsG0580024494.01.T01:CDS | 40.0% | |
| ATCACGAAGCTGCATCATTA+GGG | - | Chr5:5546137-5546156 | None:intergenic | 40.0% | |
| CTTACGAGATACGAAAATCG+AGG | - | Chr5:5545531-5545550 | None:intergenic | 40.0% | |
| GATAGTTTGAGTATGGTGAC+AGG | + | Chr5:5546081-5546100 | MsG0580024494.01.T01:intron | 40.0% | |
| TAGTTTGAGTATGGTGACAG+GGG | + | Chr5:5546083-5546102 | MsG0580024494.01.T01:intron | 40.0% | |
| TATCACGAAGCTGCATCATT+AGG | - | Chr5:5546138-5546157 | None:intergenic | 40.0% | |
| TCTAGCAAGATTTCGAAGCA+AGG | + | Chr5:5545280-5545299 | MsG0580024494.01.T01:five_prime_UTR | 40.0% | |
| TGTCTGCGAATATGATGGTT+GGG | - | Chr5:5545690-5545709 | None:intergenic | 40.0% | |
| TTATGGTGCTCTTGATGCAT+GGG | + | Chr5:5546186-5546205 | MsG0580024494.01.T01:CDS | 40.0% | |
| TTGTCTGCGAATATGATGGT+TGG | - | Chr5:5545691-5545710 | None:intergenic | 40.0% | |
| TTTATGGTGCTCTTGATGCA+TGG | + | Chr5:5546185-5546204 | MsG0580024494.01.T01:CDS | 40.0% | |
| !! | CTACTAGCTTTCTGTTCAGA+AGG | - | Chr5:5545728-5545747 | None:intergenic | 40.0% |
| !!! | TCCTAGTTTTTTTTTGGGGG+GGG | + | Chr5:5545840-5545859 | MsG0580024494.01.T01:intron | 40.0% |
| AATCCTTGGACCAAATACCG+AGG | - | Chr5:5545888-5545907 | None:intergenic | 45.0% | |
| AGCGAGAGCAAAGTTCTGTA+TGG | + | Chr5:5545949-5545968 | MsG0580024494.01.T01:intron | 45.0% | |
| ATCGATCCTGCTGTGAAATG+TGG | - | Chr5:5545255-5545274 | None:intergenic | 45.0% | |
| CTAGTGAGTAACACACTCCT+AGG | + | Chr5:5545995-5546014 | MsG0580024494.01.T01:intron | 45.0% | |
| GGATGATACCGATAGTAAGG+AGG | + | Chr5:5546159-5546178 | MsG0580024494.01.T01:CDS | 45.0% | |
| TCCAAGGATTCACTAATCCG+AGG | + | Chr5:5545898-5545917 | MsG0580024494.01.T01:intron | 45.0% | |
| TTCAATTGAGCTCCCGCTAT+GGG | - | Chr5:5545930-5545949 | None:intergenic | 45.0% | |
| TTCTCTCCACATTTCACAGC+AGG | + | Chr5:5545246-5545265 | MsG0580024494.01.T01:five_prime_UTR | 45.0% | |
| ! | CTAGGAGTGTGTTACTCACT+AGG | - | Chr5:5545997-5546016 | None:intergenic | 45.0% |
| ! | TCTTGATGCATGGGTTGCTT+GGG | + | Chr5:5546195-5546214 | MsG0580024494.01.T01:CDS | 45.0% |
| !! | TCCTCGGATTAGTGAATCCT+TGG | - | Chr5:5545902-5545921 | None:intergenic | 45.0% |
| !!! | CCTAGTTTTTTTTTGGGGGG+GGG | + | Chr5:5545841-5545860 | MsG0580024494.01.T01:intron | 45.0% |
| !!! | CTAGTTTTTTTTTGGGGGGG+GGG | + | Chr5:5545842-5545861 | MsG0580024494.01.T01:intron | 45.0% |
| !!! | TAGTTTTTTTTTGGGGGGGG+GGG | + | Chr5:5545843-5545862 | MsG0580024494.01.T01:intron | 45.0% |
| AAATCGAGGCGATCTCCACA+TGG | - | Chr5:5545517-5545536 | None:intergenic | 50.0% | |
| CACTAGGTCTCACGTTGTGT+TGG | - | Chr5:5545981-5546000 | None:intergenic | 50.0% | |
| CCCCCCCCCAAAAAAAAACT+AGG | - | Chr5:5545844-5545863 | None:intergenic | 50.0% | |
| CTTCAATTGAGCTCCCGCTA+TGG | - | Chr5:5545931-5545950 | None:intergenic | 50.0% | |
| CTTCACCATGCCAACCACTT+GGG | + | Chr5:5546033-5546052 | MsG0580024494.01.T01:intron | 50.0% | |
| TTCACCATGCCAACCACTTG+GGG | + | Chr5:5546034-5546053 | MsG0580024494.01.T01:intron | 50.0% | |
| ! | CTCTTGATGCATGGGTTGCT+TGG | + | Chr5:5546194-5546213 | MsG0580024494.01.T01:CDS | 50.0% |
| !!! | AGTTTTTTTTTGGGGGGGGG+GGG | + | Chr5:5545844-5545863 | MsG0580024494.01.T01:intron | 50.0% |
| CCAAGTGGTTGGCATGGTGA+AGG | - | Chr5:5546035-5546054 | None:intergenic | 55.0% | |
| CCTTCACCATGCCAACCACT+TGG | + | Chr5:5546032-5546051 | MsG0580024494.01.T01:intron | 55.0% | |
| TCACCATGCCAACCACTTGG+GGG | + | Chr5:5546035-5546054 | MsG0580024494.01.T01:intron | 55.0% | |
| TCCGAGGACCAATCCCATAG+CGG | + | Chr5:5545914-5545933 | MsG0580024494.01.T01:intron | 55.0% | |
| TTGAGCTCCCGCTATGGGAT+TGG | - | Chr5:5545925-5545944 | None:intergenic | 55.0% | |
| !!! | GTTTTTTTTTGGGGGGGGGG+GGG | + | Chr5:5545845-5545864 | MsG0580024494.01.T01:intron | 55.0% |
| !!! | TTTTTTTTTGGGGGGGGGGG+GGG | + | Chr5:5545846-5545865 | MsG0580024494.01.T01:intron | 55.0% |
| AGGCTGGAGAGTCGAGACCT+AGG | - | Chr5:5546015-5546034 | None:intergenic | 60.0% | |
| CAAACCCCTTCACCCCCAAG+TGG | - | Chr5:5546050-5546069 | None:intergenic | 60.0% | |
| CCAACCACTTGGGGGTGAAG+GGG | + | Chr5:5546043-5546062 | MsG0580024494.01.T01:intron | 60.0% | |
| CCGAGGACCAATCCCATAGC+GGG | + | Chr5:5545915-5545934 | MsG0580024494.01.T01:intron | 60.0% | |
| GCCAACCACTTGGGGGTGAA+GGG | + | Chr5:5546042-5546061 | MsG0580024494.01.T01:intron | 60.0% | |
| GGGCCTCGGTATTTGGTCCA+AGG | + | Chr5:5545882-5545901 | MsG0580024494.01.T01:intron | 60.0% | |
| GTGGTTGGCATGGTGAAGGC+TGG | - | Chr5:5546031-5546050 | None:intergenic | 60.0% | |
| TCACCCCCAAGTGGTTGGCA+TGG | - | Chr5:5546041-5546060 | None:intergenic | 60.0% | |
| TGCCAACCACTTGGGGGTGA+AGG | + | Chr5:5546041-5546060 | MsG0580024494.01.T01:intron | 60.0% | |
| !! | CCCGCTATGGGATTGGTCCT+CGG | - | Chr5:5545918-5545937 | None:intergenic | 60.0% |
| !!! | TTTTTTTTGGGGGGGGGGGG+GGG | + | Chr5:5545847-5545866 | MsG0580024494.01.T01:intron | 60.0% |
| CCCCTTCACCCCCAAGTGGT+TGG | - | Chr5:5546046-5546065 | None:intergenic | 65.0% | |
| !!! | TTTTTTTGGGGGGGGGGGGG+GGG | + | Chr5:5545848-5545867 | MsG0580024494.01.T01:intron | 65.0% |
| !!! | TTTTTTGGGGGGGGGGGGGG+GGG | + | Chr5:5545849-5545868 | MsG0580024494.01.T01:intron | 70.0% |
| GGGGGGGGGGCCTCGGTATT+TGG | + | Chr5:5545875-5545894 | MsG0580024494.01.T01:intron | 75.0% | |
| !! | TTTTTGGGGGGGGGGGGGGG+GGG | + | Chr5:5545850-5545869 | MsG0580024494.01.T01:intron | 75.0% |
| !!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | Chr5:5545851-5545870 | MsG0580024494.01.T01:intron | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | Chr5:5545852-5545871 | MsG0580024494.01.T01:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | Chr5:5545853-5545872 | MsG0580024494.01.T01:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGCCT+CGG | + | Chr5:5545868-5545887 | MsG0580024494.01.T01:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | Chr5:5545854-5545873 | MsG0580024494.01.T01:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 5545187 | 5546243 | 5545187 | ID=MsG0580024494.01;Name=MsG0580024494.01 |
| Chr5 | mRNA | 5545187 | 5546243 | 5545187 | ID=MsG0580024494.01.T01;Parent=MsG0580024494.01;Name=MsG0580024494.01.T01;_AED=0.47;_eAED=0.50;_QI=199|0.66|0.75|1|0|0|4|0|119 |
| Chr5 | exon | 5545187 | 5545301 | 5545187 | ID=MsG0580024494.01.T01:exon:19088;Parent=MsG0580024494.01.T01 |
| Chr5 | exon | 5545432 | 5545545 | 5545432 | ID=MsG0580024494.01.T01:exon:19089;Parent=MsG0580024494.01.T01 |
| Chr5 | exon | 5545629 | 5545817 | 5545629 | ID=MsG0580024494.01.T01:exon:19090;Parent=MsG0580024494.01.T01 |
| Chr5 | exon | 5546103 | 5546243 | 5546103 | ID=MsG0580024494.01.T01:exon:19091;Parent=MsG0580024494.01.T01 |
| Chr5 | five_prime_UTR | 5545187 | 5545301 | 5545187 | ID=MsG0580024494.01.T01:five_prime_utr;Parent=MsG0580024494.01.T01 |
| Chr5 | five_prime_UTR | 5545432 | 5545515 | 5545432 | ID=MsG0580024494.01.T01:five_prime_utr;Parent=MsG0580024494.01.T01 |
| Chr5 | CDS | 5545516 | 5545545 | 5545516 | ID=MsG0580024494.01.T01:cds;Parent=MsG0580024494.01.T01 |
| Chr5 | CDS | 5545629 | 5545817 | 5545629 | ID=MsG0580024494.01.T01:cds;Parent=MsG0580024494.01.T01 |
| Chr5 | CDS | 5546103 | 5546243 | 5546103 | ID=MsG0580024494.01.T01:cds;Parent=MsG0580024494.01.T01 |
| Gene Sequence |
| Protein sequence |
