Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044257.01.T01 | RHN47114.1 | 58.407 | 113 | 18 | 3 | 249 | 334 | 556 | 666 | 1.67E-22 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044257.01.T01 | P02302 | 91.429 | 35 | 3 | 0 | 332 | 366 | 54 | 88 | 1.99E-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044257.01.T01 | A0A396H5W9 | 58.407 | 113 | 18 | 3 | 249 | 334 | 556 | 666 | 7.97e-23 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047797.01 | MsG0880044257.01 | 0.822421 | 2.389976e-53 | 1.999554e-50 |
| MsG0080048402.01 | MsG0880044257.01 | 0.804476 | 2.121396e-49 | 1.094837e-46 |
| MsG0080048874.01 | MsG0880044257.01 | 0.802899 | 4.505650e-49 | 2.233238e-46 |
| MsG0180000470.01 | MsG0880044257.01 | 0.829019 | 6.506519e-55 | 6.577120e-52 |
| MsG0180000702.01 | MsG0880044257.01 | 0.816369 | 5.729254e-52 | 4.052119e-49 |
| MsG0880044257.01 | MsG0880045372.01 | 0.820294 | 7.401744e-53 | 5.833178e-50 |
| MsG0880044257.01 | MsG0880045639.01 | 0.808132 | 3.598436e-50 | 2.041012e-47 |
| MsG0880044257.01 | MsG0880045895.01 | 0.809882 | 1.519196e-50 | 9.025030e-48 |
| MsG0880044257.01 | MsG0880046020.01 | 0.830419 | 2.968527e-55 | 3.125782e-52 |
| MsG0180002952.01 | MsG0880044257.01 | 0.805559 | 1.258881e-49 | 6.680761e-47 |
| MsG0180004275.01 | MsG0880044257.01 | 0.822543 | 2.238991e-53 | 1.879785e-50 |
| MsG0180004295.01 | MsG0880044257.01 | 0.808667 | 2.767095e-50 | 1.591611e-47 |
| MsG0180004331.01 | MsG0880044257.01 | 0.821313 | 4.315603e-53 | 3.498728e-50 |
| MsG0180004465.01 | MsG0880044257.01 | 0.815502 | 8.948371e-52 | 6.180538e-49 |
| MsG0180004943.01 | MsG0880044257.01 | 0.823355 | 1.448698e-53 | 1.244339e-50 |
| MsG0180005185.01 | MsG0880044257.01 | 0.837268 | 5.746447e-57 | 7.424696e-54 |
| MsG0180005445.01 | MsG0880044257.01 | 0.841743 | 3.948446e-58 | 5.856602e-55 |
| MsG0180006134.01 | MsG0880044257.01 | 0.863313 | 2.721733e-64 | 8.215635e-61 |
| MsG0780040669.01 | MsG0880044257.01 | 0.807455 | 5.013120e-50 | 2.793537e-47 |
| MsG0880043450.01 | MsG0880044257.01 | 0.802145 | 6.445828e-49 | 3.133995e-46 |
| MsG0880043480.01 | MsG0880044257.01 | 0.802130 | 6.491625e-49 | 3.155056e-46 |
| MsG0280010698.01 | MsG0880044257.01 | 0.820998 | 5.098965e-53 | 4.098369e-50 |
| MsG0280011334.01 | MsG0880044257.01 | 0.803796 | 2.938632e-49 | 1.490368e-46 |
| MsG0380012330.01 | MsG0880044257.01 | 0.804744 | 1.865271e-49 | 9.694321e-47 |
| MsG0380013176.01 | MsG0880044257.01 | 0.835664 | 1.471318e-56 | 1.811367e-53 |
| MsG0380014537.01 | MsG0880044257.01 | 0.810715 | 1.004263e-50 | 6.098737e-48 |
| MsG0680035123.01 | MsG0880044257.01 | 0.829962 | 3.837473e-55 | 3.987892e-52 |
| MsG0480018465.01 | MsG0880044257.01 | 0.814403 | 1.568529e-51 | 1.051511e-48 |
| MsG0480021688.01 | MsG0880044257.01 | 0.810298 | 1.235593e-50 | 7.420275e-48 |
| MsG0480021784.01 | MsG0880044257.01 | 0.802087 | 6.626150e-49 | 3.216942e-46 |
| MsG0480021998.01 | MsG0880044257.01 | 0.800532 | 1.378962e-48 | 6.436053e-46 |
| MsG0480022262.01 | MsG0880044257.01 | 0.803371 | 3.598799e-49 | 1.805321e-46 |
| MsG0480022551.01 | MsG0880044257.01 | 0.805436 | 1.336111e-49 | 7.068382e-47 |
| MsG0480023165.01 | MsG0880044257.01 | 0.800681 | 1.286094e-48 | 6.025262e-46 |
| MsG0480023670.01 | MsG0880044257.01 | 0.821265 | 4.425671e-53 | 3.583031e-50 |
| MsG0480023873.01 | MsG0880044257.01 | 0.819027 | 1.440723e-52 | 1.096213e-49 |
| MsG0580024305.01 | MsG0880044257.01 | 0.839106 | 1.931759e-57 | 2.640600e-54 |
| MsG0580024306.01 | MsG0880044257.01 | 0.830531 | 2.786891e-55 | 2.944036e-52 |
| MsG0580024418.01 | MsG0880044257.01 | 0.801600 | 8.340963e-49 | 3.999419e-46 |
| MsG0580024690.01 | MsG0880044257.01 | 0.830109 | 3.534262e-55 | 3.688262e-52 |
| MsG0580024960.01 | MsG0880044257.01 | 0.800255 | 1.570314e-48 | 7.277909e-46 |
| MsG0580025022.01 | MsG0880044257.01 | 0.801058 | 1.076790e-48 | 5.093641e-46 |
| MsG0580025723.01 | MsG0880044257.01 | 0.811514 | 6.739309e-51 | 4.180228e-48 |
| MsG0380015039.01 | MsG0880044257.01 | 0.808617 | 2.836593e-50 | 1.629393e-47 |
| MsG0380016236.01 | MsG0880044257.01 | 0.810480 | 1.128643e-50 | 6.810936e-48 |
| MsG0380016561.01 | MsG0880044257.01 | 0.802016 | 6.850880e-49 | 3.320027e-46 |
| MsG0380016694.01 | MsG0880044257.01 | 0.804958 | 1.682049e-49 | 8.790478e-47 |
| MsG0580027152.01 | MsG0880044257.01 | 0.818211 | 2.205865e-52 | 1.640852e-49 |
| MsG0580027745.01 | MsG0880044257.01 | 0.804872 | 1.753462e-49 | 9.143728e-47 |
| MsG0580027947.01 | MsG0880044257.01 | 0.801692 | 7.985987e-49 | 3.838240e-46 |
| MsG0580029622.01 | MsG0880044257.01 | 0.823435 | 1.387695e-53 | 1.194689e-50 |
| MsG0680030561.01 | MsG0880044257.01 | 0.807503 | 4.895878e-50 | 2.731628e-47 |
| MsG0680030677.01 | MsG0880044257.01 | 0.823049 | 1.707091e-53 | 1.453905e-50 |
| MsG0280006510.01 | MsG0880044257.01 | 0.804888 | 1.740041e-49 | 9.077534e-47 |
| MsG0280006770.01 | MsG0880044257.01 | 0.805013 | 1.638166e-49 | 8.572622e-47 |
| MsG0280007529.01 | MsG0880044257.01 | 0.809877 | 1.522716e-50 | 9.044879e-48 |
| MsG0280008030.01 | MsG0880044257.01 | 0.805013 | 1.638166e-49 | 8.572622e-47 |
| MsG0280008363.01 | MsG0880044257.01 | 0.810628 | 1.048697e-50 | 6.353582e-48 |
| MsG0280008615.01 | MsG0880044257.01 | 0.800109 | 1.681246e-48 | 7.763185e-46 |
| MsG0280009421.01 | MsG0880044257.01 | 0.821234 | 4.499142e-53 | 3.639662e-50 |
| MsG0280009748.01 | MsG0880044257.01 | 0.814469 | 1.516392e-51 | 1.018399e-48 |
| MsG0680035764.01 | MsG0880044257.01 | 0.809153 | 2.178576e-50 | 1.269423e-47 |
| MsG0780036018.01 | MsG0880044257.01 | 0.814213 | 1.727452e-51 | 1.152016e-48 |
| MsG0780036201.01 | MsG0880044257.01 | 0.818148 | 2.280143e-52 | 1.693140e-49 |
| MsG0780037146.01 | MsG0880044257.01 | 0.824415 | 8.171146e-54 | 7.232450e-51 |
| MsG0780039252.01 | MsG0880044257.01 | 0.809283 | 2.043116e-50 | 1.194638e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044257.01.T01 | MTR_2g078670 | 54.795 | 73 | 32 | 1 | 69 | 140 | 1 | 73 | 6.36e-15 | 71.2 |
| MsG0880044257.01.T01 | MTR_7g059070 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_5g029820 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_5g029770 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_4g065990 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_4g088150 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_2g035230 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_8g092720 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_8g063500 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_8g103245 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_8g092820 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.88e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_4g097175 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.59e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_4g097175 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.38e-11 | 62.0 |
| MsG0880044257.01.T01 | MTR_1g023630 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.59e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_1g023630 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.38e-11 | 62.0 |
| MsG0880044257.01.T01 | MTR_8g061940 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.59e-14 | 69.3 |
| MsG0880044257.01.T01 | MTR_8g061940 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.38e-11 | 62.0 |
| MsG0880044257.01.T01 | MTR_2g082370 | 96.970 | 33 | 1 | 0 | 332 | 364 | 64 | 96 | 6.84e-14 | 68.9 |
| MsG0880044257.01.T01 | MTR_8g099430 | 93.939 | 33 | 2 | 0 | 332 | 364 | 54 | 86 | 1.65e-13 | 67.8 |
| MsG0880044257.01.T01 | MTR_8g099430 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.45e-11 | 62.0 |
| MsG0880044257.01.T01 | MTR_4g097170 | 96.970 | 33 | 1 | 0 | 332 | 364 | 95 | 127 | 2.02e-13 | 68.6 |
| MsG0880044257.01.T01 | MTR_4g097170 | 90.000 | 30 | 3 | 0 | 38 | 67 | 63 | 92 | 4.63e-11 | 61.6 |
| MsG0880044257.01.T01 | MTR_7g013610 | 96.970 | 33 | 1 | 0 | 332 | 364 | 153 | 185 | 3.49e-13 | 68.9 |
| MsG0880044257.01.T01 | MTR_2g082310 | 71.739 | 46 | 13 | 0 | 332 | 377 | 54 | 99 | 1.05e-12 | 65.5 |
| MsG0880044257.01.T01 | MTR_2g082310 | 86.667 | 30 | 4 | 0 | 38 | 67 | 22 | 51 | 6.27e-11 | 60.1 |
| MsG0880044257.01.T01 | MTR_2g082340 | 71.739 | 46 | 13 | 0 | 332 | 377 | 54 | 99 | 1.05e-12 | 65.5 |
| MsG0880044257.01.T01 | MTR_2g082340 | 86.667 | 30 | 4 | 0 | 38 | 67 | 22 | 51 | 6.27e-11 | 60.1 |
| MsG0880044257.01.T01 | MTR_7g013600 | 87.879 | 33 | 4 | 0 | 332 | 364 | 31 | 63 | 1.97e-12 | 63.9 |
| MsG0880044257.01.T01 | MTR_1g023630 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 5.54e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044257.01.T01 | AT5G65360 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.76e-14 | 69.3 |
| MsG0880044257.01.T01 | AT5G10390 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.76e-14 | 69.3 |
| MsG0880044257.01.T01 | AT5G10400 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.76e-14 | 69.3 |
| MsG0880044257.01.T01 | AT3G27360 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.76e-14 | 69.3 |
| MsG0880044257.01.T01 | AT1G09200 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 3.76e-14 | 69.3 |
| MsG0880044257.01.T01 | AT5G10980 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT5G10980 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40040 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40040 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40040 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40040 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40040 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40040 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40030 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40030 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40030 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40030 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT4G40030 | 96.970 | 33 | 1 | 0 | 332 | 364 | 54 | 86 | 4.80e-14 | 69.3 |
| MsG0880044257.01.T01 | AT4G40030 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.44e-11 | 62.0 |
| MsG0880044257.01.T01 | AT5G65350 | 93.939 | 33 | 2 | 0 | 332 | 364 | 54 | 86 | 9.19e-14 | 68.6 |
| MsG0880044257.01.T01 | AT4G40030 | 96.970 | 33 | 1 | 0 | 332 | 364 | 82 | 114 | 1.16e-13 | 68.9 |
| MsG0880044257.01.T01 | AT4G40030 | 90.000 | 30 | 3 | 0 | 38 | 67 | 50 | 79 | 1.77e-11 | 62.8 |
| MsG0880044257.01.T01 | AT1G75600 | 93.939 | 33 | 2 | 0 | 332 | 364 | 54 | 86 | 1.28e-13 | 68.2 |
| MsG0880044257.01.T01 | AT1G75600 | 90.000 | 30 | 3 | 0 | 38 | 67 | 22 | 51 | 1.64e-11 | 62.0 |
| MsG0880044257.01.T01 | AT1G13370 | 93.939 | 33 | 2 | 0 | 332 | 364 | 54 | 86 | 5.53e-13 | 66.2 |
| MsG0880044257.01.T01 | AT1G13370 | 86.667 | 30 | 4 | 0 | 38 | 67 | 22 | 51 | 5.62e-11 | 60.5 |
| MsG0880044257.01.T01 | AT1G19890 | 90.909 | 33 | 3 | 0 | 332 | 364 | 55 | 87 | 1.10e-12 | 65.5 |
| MsG0880044257.01.T01 | AT5G53940 | 87.500 | 32 | 4 | 0 | 69 | 100 | 1 | 32 | 1.25e-12 | 65.1 |
Find 83 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCAAAGTGACTCATTT+TGG | 0.117925 | 8:+38715980 | MsG0880044257.01.T01:CDS |
| GTCTTGTATGTTTCCTATTA+TGG | 0.177503 | 8:+38716169 | MsG0880044257.01.T01:CDS |
| TGTTATTTACAGTGAGAAAA+TGG | 0.212545 | 8:+38715377 | MsG0880044257.01.T01:intron |
| AATAACACACACTTGTAATA+TGG | 0.222581 | 8:-38716466 | None:intergenic |
| TTAAACATCAATTTATATAA+AGG | 0.239820 | 8:-38716019 | None:intergenic |
| TAAGTTCCTTCCCTCCAATT+TGG | 0.283084 | 8:-38716623 | None:intergenic |
| TATCCTTCTGCAGTAGAGTT+TGG | 0.311864 | 8:-38716270 | None:intergenic |
| CTGCAGAAGGATATATTGTT+TGG | 0.318222 | 8:+38716280 | MsG0880044257.01.T01:CDS |
| TACCGAAGTGCGACGGTTCC+AGG | 0.319747 | 8:-38715226 | None:intergenic |
| CAAATTCTGCAGAACTCATT+TGG | 0.327401 | 8:+38715443 | MsG0880044257.01.T01:CDS |
| TAAACATCAATTTATATAAA+GGG | 0.341933 | 8:-38716018 | None:intergenic |
| TGCTCTCTGATTAATTTGTA+TGG | 0.354739 | 8:+38716142 | MsG0880044257.01.T01:CDS |
| GATTCGCGGTGAACGTGCTT+AGG | 0.374557 | 8:+38717054 | MsG0880044257.01.T01:CDS |
| TGCTAGAGAAAATACCAAAT+TGG | 0.384385 | 8:+38716609 | MsG0880044257.01.T01:CDS |
| GCTTTGCAGCAACGCGGAAT+AGG | 0.389476 | 8:-38714690 | None:intergenic |
| TCTGCAGAATTTGCATCTAT+AGG | 0.389978 | 8:-38715433 | None:intergenic |
| GTATAACTTTGAATTGGTTA+AGG | 0.390861 | 8:+38716676 | MsG0880044257.01.T01:CDS |
| ACACAGAGTCAATGAATGTT+TGG | 0.394346 | 8:-38716655 | None:intergenic |
| CTCTGTGTATAACTTTGAAT+TGG | 0.403490 | 8:+38716670 | MsG0880044257.01.T01:CDS |
| AGGGAAGGAACTTATGAGTA+TGG | 0.422730 | 8:+38716632 | MsG0880044257.01.T01:CDS |
| TTGCAGATGATCTCATTTCT+CGG | 0.425376 | 8:+38715469 | MsG0880044257.01.T01:CDS |
| ATAACACACACTTGTAATAT+GGG | 0.434480 | 8:-38716465 | None:intergenic |
| GTTATTTACAGTGAGAAAAT+GGG | 0.435033 | 8:+38715378 | MsG0880044257.01.T01:intron |
| AAGAATCTTTGTGGTGGAGC+TGG | 0.437208 | 8:+38715401 | MsG0880044257.01.T01:CDS |
| CTAGAGCTGAATCATGTGAT+TGG | 0.444712 | 8:+38716050 | MsG0880044257.01.T01:CDS |
| CTCTGATTAATTTGTATGGA+AGG | 0.449030 | 8:+38716146 | MsG0880044257.01.T01:CDS |
| TCACGGACAAGACGCTGAAA+TGG | 0.451915 | 8:-38716871 | None:intergenic |
| TGAAATCTTGAGCAATTTCA+CGG | 0.459574 | 8:-38716888 | None:intergenic |
| TTGTGGTGGAGCTGGAGGGC+AGG | 0.462348 | 8:+38715409 | MsG0880044257.01.T01:CDS |
| TGCAGATGATCTCATTTCTC+GGG | 0.463022 | 8:+38715470 | MsG0880044257.01.T01:CDS |
| AAACCTCACCGTTACCGTCC+TGG | 0.463835 | 8:+38715208 | MsG0880044257.01.T01:CDS |
| TGAAATTGCTCAAGATTTCA+AGG | 0.466768 | 8:+38716891 | MsG0880044257.01.T01:CDS |
| AGGAAATCTGCTCCTACTAC+TGG | 0.467062 | 8:+38715175 | MsG0880044257.01.T01:CDS |
| CGAGCAAGCTGAATGTCCTC+TGG | 0.473128 | 8:-38717028 | None:intergenic |
| CAACGCGGAATAGGAATTGT+GGG | 0.480240 | 8:-38714681 | None:intergenic |
| TAGAGCTGAATCATGTGATT+GGG | 0.487224 | 8:+38716051 | MsG0880044257.01.T01:CDS |
| TACAATCTTGAGGACAAGCT+TGG | 0.488476 | 8:+38716091 | MsG0880044257.01.T01:CDS |
| ATTCGCGGTGAACGTGCTTA+GGG | 0.501136 | 8:+38717055 | MsG0880044257.01.T01:CDS |
| CAGCTTGCTCGTCGGATTCG+CGG | 0.501986 | 8:+38717040 | MsG0880044257.01.T01:CDS |
| CTTGTCCTCAAGATTGTAGA+AGG | 0.505829 | 8:-38716086 | None:intergenic |
| AATCATGTGATTGGGAATGT+TGG | 0.511180 | 8:+38716059 | MsG0880044257.01.T01:CDS |
| CTCTCAAAGGAAGCATGTCA+TGG | 0.517047 | 8:+38716324 | MsG0880044257.01.T01:CDS |
| CTATCAGTGACAATAGCAAA+TGG | 0.521414 | 8:-38716427 | None:intergenic |
| TATCAGATGAATAAGAAAGC+CGG | 0.523385 | 8:+38715920 | MsG0880044257.01.T01:intron |
| ATCAGATGAATAAGAAAGCC+GGG | 0.533261 | 8:+38715921 | MsG0880044257.01.T01:intron |
| TCTGATTAATTTGTATGGAA+GGG | 0.545738 | 8:+38716147 | MsG0880044257.01.T01:CDS |
| AATCTTTGTGGTGGAGCTGG+AGG | 0.548296 | 8:+38715404 | MsG0880044257.01.T01:CDS |
| TAGAGAAAATACCAAATTGG+AGG | 0.552258 | 8:+38716612 | MsG0880044257.01.T01:CDS |
| GCAACGCGGAATAGGAATTG+TGG | 0.552336 | 8:-38714682 | None:intergenic |
| AAATATGAAGTAAGTGAGGA+GGG | 0.552565 | 8:+38715947 | MsG0880044257.01.T01:CDS |
| GAATACCTTCTACAATCTTG+AGG | 0.554083 | 8:+38716081 | MsG0880044257.01.T01:CDS |
| CTTCAAATGAGCACTCTCAA+AGG | 0.558757 | 8:+38716311 | MsG0880044257.01.T01:CDS |
| AAAATACCAAATTGGAGGGA+AGG | 0.560350 | 8:+38716617 | MsG0880044257.01.T01:CDS |
| TCTCAAAGGAAGCATGTCAT+GGG | 0.565532 | 8:+38716325 | MsG0880044257.01.T01:CDS |
| GTCCTGGAACCGTCGCACTT+CGG | 0.565588 | 8:+38715224 | MsG0880044257.01.T01:CDS |
| CGACGGTTCCAGGACGGTAA+CGG | 0.569651 | 8:-38715216 | None:intergenic |
| ATAGAACTTGCAAGATGGAA+AGG | 0.569669 | 8:-38716244 | None:intergenic |
| TCGCAAAGACAGAGAGAGAA+GGG | 0.572355 | 8:-38714721 | None:intergenic |
| GATCCAAACTCTACTGCAGA+AGG | 0.572477 | 8:+38716267 | MsG0880044257.01.T01:CDS |
| GAAAATGGGAAGAATCTTTG+TGG | 0.573995 | 8:+38715392 | MsG0880044257.01.T01:CDS |
| GGATCATAGAACTTGCAAGA+TGG | 0.575236 | 8:-38716249 | None:intergenic |
| ACTTACTTCATATTTGTACC+CGG | 0.582063 | 8:-38715939 | None:intergenic |
| ATCTTTGTGGTGGAGCTGGA+GGG | 0.585005 | 8:+38715405 | MsG0880044257.01.T01:CDS |
| CGCGGTGAACGTGCTTAGGG+TGG | 0.589504 | 8:+38717058 | MsG0880044257.01.T01:CDS |
| CAAATATGAAGTAAGTGAGG+AGG | 0.594335 | 8:+38715946 | MsG0880044257.01.T01:CDS |
| AGAGAAAATACCAAATTGGA+GGG | 0.600710 | 8:+38716613 | MsG0880044257.01.T01:CDS |
| ATTGTCACTGATAGTTCTTG+TGG | 0.603137 | 8:+38716436 | MsG0880044257.01.T01:CDS |
| ATCGCAAAGACAGAGAGAGA+AGG | 0.609461 | 8:-38714722 | None:intergenic |
| ACGAAATTACCGAAGTGCGA+CGG | 0.610470 | 8:-38715233 | None:intergenic |
| AAATCTGCTCCTACTACTGG+AGG | 0.621038 | 8:+38715178 | MsG0880044257.01.T01:CDS |
| GAACGTGCTTAGGGTGGTGA+AGG | 0.623913 | 8:+38717064 | MsG0880044257.01.T01:CDS |
| AGGACATTCAGCTTGCTCGT+CGG | 0.641454 | 8:+38717032 | MsG0880044257.01.T01:CDS |
| GACGCTGAAATGGAAGCTTG+CGG | 0.649029 | 8:-38716861 | None:intergenic |
| GTACAAATATGAAGTAAGTG+AGG | 0.651788 | 8:+38715943 | MsG0880044257.01.T01:CDS |
| AATGGGAAGAATCTTTGTGG+TGG | 0.654666 | 8:+38715395 | MsG0880044257.01.T01:CDS |
| GGACACGTGTAATGATCTTG+TGG | 0.661046 | 8:+38714644 | None:intergenic |
| GGACAAGCTTGGTCTTCATG+CGG | 0.672916 | 8:+38716102 | MsG0880044257.01.T01:CDS |
| GTTCCAGGACGGTAACGGTG+AGG | 0.678668 | 8:-38715211 | None:intergenic |
| GAAGTGCGACGGTTCCAGGA+CGG | 0.701371 | 8:-38715222 | None:intergenic |
| AACGCGGAATAGGAATTGTG+GGG | 0.703065 | 8:-38714680 | None:intergenic |
| AGACGGATCTGAGATTCCAG+AGG | 0.705393 | 8:+38717012 | MsG0880044257.01.T01:intron |
| AAGAATGCTTTGCAGCAACG+CGG | 0.716589 | 8:-38714696 | None:intergenic |
| AAACACAAAAGTTCCAACAG+TGG | 0.740399 | 8:-38716395 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTCAAGAAAATAAAA+AGG | - | Chr8:38715530-38715549 | None:intergenic | 10.0% |
| !! | TAAACATCAATTTATATAAA+GGG | - | Chr8:38716021-38716040 | None:intergenic | 10.0% |
| !! | TTAAACATCAATTTATATAA+AGG | - | Chr8:38716022-38716041 | None:intergenic | 10.0% |
| !! | AGTAAATTCTTAATTATCTA+AGG | + | Chr8:38715634-38715653 | MsG0880044257.01.T01:intron | 15.0% |
| !! | AATAAAATCATTCCCAAAAT+TGG | - | Chr8:38716528-38716547 | None:intergenic | 20.0% |
| !! | ACAAATTAAATAAACCAAAG+AGG | - | Chr8:38716965-38716984 | None:intergenic | 20.0% |
| !! | GTGATAGTTTAAAAAGTAAA+GGG | - | Chr8:38715502-38715521 | None:intergenic | 20.0% |
| !! | TCTGAAAACCTAAAAAATTA+GGG | - | Chr8:38715263-38715282 | None:intergenic | 20.0% |
| !!! | AGAGTTTTGAATTTGAATTT+CGG | + | Chr8:38715280-38715299 | MsG0880044257.01.T01:intron | 20.0% |
| !!! | ATTTCGGATTCATAATTTTT+AGG | + | Chr8:38715296-38715315 | MsG0880044257.01.T01:intron | 20.0% |
| !!! | TTTGATATTGTTGTTATAGA+CGG | + | Chr8:38716995-38717014 | MsG0880044257.01.T01:intron | 20.0% |
| !!! | TTTTAGGAATTTTGAATTTG+CGG | + | Chr8:38715312-38715331 | MsG0880044257.01.T01:intron | 20.0% |
| ! | AATAACACACACTTGTAATA+TGG | - | Chr8:38716469-38716488 | None:intergenic | 25.0% |
| ! | ATAACACACACTTGTAATAT+GGG | - | Chr8:38716468-38716487 | None:intergenic | 25.0% |
| ! | CGTGATAGTTTAAAAAGTAA+AGG | - | Chr8:38715503-38715522 | None:intergenic | 25.0% |
| ! | CTGAAAACCTAAAAAATTAG+GGG | - | Chr8:38715262-38715281 | None:intergenic | 25.0% |
| ! | GTATAACTTTGAATTGGTTA+AGG | + | Chr8:38716676-38716695 | MsG0880044257.01.T01:CDS | 25.0% |
| ! | GTTATTTACAGTGAGAAAAT+GGG | + | Chr8:38715378-38715397 | MsG0880044257.01.T01:intron | 25.0% |
| ! | TGTAATTGTTGCAAATGATA+AGG | + | Chr8:38716717-38716736 | MsG0880044257.01.T01:intron | 25.0% |
| !! | ATGTTTCCTATTATGGTTTT+TGG | + | Chr8:38716176-38716195 | MsG0880044257.01.T01:CDS | 25.0% |
| !! | ATTTGCGGTTTATGATTTTT+AGG | + | Chr8:38715327-38715346 | MsG0880044257.01.T01:intron | 25.0% |
| !! | CTCTGAAAACCTAAAAAATT+AGG | - | Chr8:38715264-38715283 | None:intergenic | 25.0% |
| !! | TGTTATTTACAGTGAGAAAA+TGG | + | Chr8:38715377-38715396 | MsG0880044257.01.T01:intron | 25.0% |
| !! | TTCATTTCTTTTCCATACTA+GGG | + | Chr8:38715716-38715735 | MsG0880044257.01.T01:intron | 25.0% |
| !! | TTTCATTTCTTTTCCATACT+AGG | + | Chr8:38715715-38715734 | MsG0880044257.01.T01:intron | 25.0% |
| !! | TTTTTCGTTTTCTCGATAAT+AGG | + | Chr8:38715091-38715110 | MsG0880044257.01.T01:intron | 25.0% |
| !!! | GTAGTTTTGAATTTGGTATT+TGG | + | Chr8:38716555-38716574 | MsG0880044257.01.T01:intron | 25.0% |
| !!! | TCTGATTAATTTGTATGGAA+GGG | + | Chr8:38716147-38716166 | MsG0880044257.01.T01:CDS | 25.0% |
| AAATATGAAGTAAGTGAGGA+GGG | + | Chr8:38715947-38715966 | MsG0880044257.01.T01:CDS | 30.0% | |
| AACATAGAAGTCTTTACGAA+CGG | - | Chr8:38715897-38715916 | None:intergenic | 30.0% | |
| AACATAGAAGTGATAGCATT+TGG | - | Chr8:38715868-38715887 | None:intergenic | 30.0% | |
| ACTTACTTCATATTTGTACC+CGG | - | Chr8:38715942-38715961 | None:intergenic | 30.0% | |
| AGAGAAAATACCAAATTGGA+GGG | + | Chr8:38716613-38716632 | MsG0880044257.01.T01:CDS | 30.0% | |
| ATGAAGCCAAAAACCATAAT+AGG | - | Chr8:38716185-38716204 | None:intergenic | 30.0% | |
| CTCTGTGTATAACTTTGAAT+TGG | + | Chr8:38716670-38716689 | MsG0880044257.01.T01:CDS | 30.0% | |
| CTGTAAATAACATCAATCGA+AGG | - | Chr8:38715369-38715388 | None:intergenic | 30.0% | |
| GAAAAACAAATCAGTTACAG+CGG | - | Chr8:38715077-38715096 | None:intergenic | 30.0% | |
| GTACAAATATGAAGTAAGTG+AGG | + | Chr8:38715943-38715962 | MsG0880044257.01.T01:CDS | 30.0% | |
| GTCTTGTATGTTTCCTATTA+TGG | + | Chr8:38716169-38716188 | MsG0880044257.01.T01:CDS | 30.0% | |
| TAGAGAAAATACCAAATTGG+AGG | + | Chr8:38716612-38716631 | MsG0880044257.01.T01:CDS | 30.0% | |
| TATCAGATGAATAAGAAAGC+CGG | + | Chr8:38715920-38715939 | MsG0880044257.01.T01:intron | 30.0% | |
| TGAAATCTTGAGCAATTTCA+CGG | - | Chr8:38716891-38716910 | None:intergenic | 30.0% | |
| TGAAATTGCTCAAGATTTCA+AGG | + | Chr8:38716891-38716910 | MsG0880044257.01.T01:CDS | 30.0% | |
| TGCTAGAGAAAATACCAAAT+TGG | + | Chr8:38716609-38716628 | MsG0880044257.01.T01:CDS | 30.0% | |
| TTCAAGAATGTTTCACAAAC+AGG | - | Chr8:38715566-38715585 | None:intergenic | 30.0% | |
| ! | CAATTTTGTTGATCCAACTT+AGG | + | Chr8:38715818-38715837 | MsG0880044257.01.T01:intron | 30.0% |
| ! | CTAAGTTGGATCAACAAAAT+TGG | - | Chr8:38715820-38715839 | None:intergenic | 30.0% |
| ! | GGGAATGATTTTATTGTTGT+TGG | + | Chr8:38716533-38716552 | MsG0880044257.01.T01:intron | 30.0% |
| ! | TCGTTTTCCCCTAATTTTTT+AGG | + | Chr8:38715252-38715271 | MsG0880044257.01.T01:intron | 30.0% |
| ! | TCTGAGATTTGAATTTACCT+TGG | - | Chr8:38714773-38714792 | None:intergenic | 30.0% |
| ! | TGTGAAATCTTTTTCCTCTT+TGG | + | Chr8:38716948-38716967 | MsG0880044257.01.T01:intron | 30.0% |
| ! | TTCGATTTGCATGAAGAAAT+TGG | - | Chr8:38714797-38714816 | None:intergenic | 30.0% |
| !! | AATCGATTTTCACTGTTGAT+CGG | - | Chr8:38714929-38714948 | None:intergenic | 30.0% |
| !! | CTCTGATTAATTTGTATGGA+AGG | + | Chr8:38716146-38716165 | MsG0880044257.01.T01:CDS | 30.0% |
| !! | TGCTCTCTGATTAATTTGTA+TGG | + | Chr8:38716142-38716161 | MsG0880044257.01.T01:CDS | 30.0% |
| !!! | GTTGTTGGTAGTTTTGAATT+TGG | + | Chr8:38716548-38716567 | MsG0880044257.01.T01:intron | 30.0% |
| !!! | TTTCATCGCTTTTTTTGTTC+AGG | + | Chr8:38715147-38715166 | MsG0880044257.01.T01:intron | 30.0% |
| AAAATACCAAATTGGAGGGA+AGG | + | Chr8:38716617-38716636 | MsG0880044257.01.T01:CDS | 35.0% | |
| AAACACAAAAGTTCCAACAG+TGG | - | Chr8:38716398-38716417 | None:intergenic | 35.0% | |
| AATCATGTGATTGGGAATGT+TGG | + | Chr8:38716059-38716078 | MsG0880044257.01.T01:CDS | 35.0% | |
| ACACAGAGTCAATGAATGTT+TGG | - | Chr8:38716658-38716677 | None:intergenic | 35.0% | |
| ACAGTTGAGTTCATGCTAAT+TGG | - | Chr8:38716745-38716764 | None:intergenic | 35.0% | |
| ACTGAACGATGAAAAACAGA+AGG | - | Chr8:38714848-38714867 | None:intergenic | 35.0% | |
| ATAGAACTTGCAAGATGGAA+AGG | - | Chr8:38716247-38716266 | None:intergenic | 35.0% | |
| ATCAGATGAATAAGAAAGCC+GGG | + | Chr8:38715921-38715940 | MsG0880044257.01.T01:intron | 35.0% | |
| ATCTAAACAGATCGAACGAA+TGG | - | Chr8:38714825-38714844 | None:intergenic | 35.0% | |
| ATTGTCACTGATAGTTCTTG+TGG | + | Chr8:38716436-38716455 | MsG0880044257.01.T01:CDS | 35.0% | |
| CAAATATGAAGTAAGTGAGG+AGG | + | Chr8:38715946-38715965 | MsG0880044257.01.T01:CDS | 35.0% | |
| CAAATTCTGCAGAACTCATT+TGG | + | Chr8:38715443-38715462 | MsG0880044257.01.T01:CDS | 35.0% | |
| CTATCAGTGACAATAGCAAA+TGG | - | Chr8:38716430-38716449 | None:intergenic | 35.0% | |
| CTGCAGAAGGATATATTGTT+TGG | + | Chr8:38716280-38716299 | MsG0880044257.01.T01:CDS | 35.0% | |
| GAAAATGGGAAGAATCTTTG+TGG | + | Chr8:38715392-38715411 | MsG0880044257.01.T01:CDS | 35.0% | |
| GAATACCTTCTACAATCTTG+AGG | + | Chr8:38716081-38716100 | MsG0880044257.01.T01:CDS | 35.0% | |
| TAGAGCTGAATCATGTGATT+GGG | + | Chr8:38716051-38716070 | MsG0880044257.01.T01:CDS | 35.0% | |
| TCTGCAGAATTTGCATCTAT+AGG | - | Chr8:38715436-38715455 | None:intergenic | 35.0% | |
| TCTTATTCATCTGCCTAAGT+TGG | - | Chr8:38715834-38715853 | None:intergenic | 35.0% | |
| TTGCAGATGATCTCATTTCT+CGG | + | Chr8:38715469-38715488 | MsG0880044257.01.T01:CDS | 35.0% | |
| ! | AGTGTGTGTTATTACAATCC+TGG | + | Chr8:38716476-38716495 | MsG0880044257.01.T01:intron | 35.0% |
| ! | CAAAATTGGAAGCATGATGT+GGG | - | Chr8:38716514-38716533 | None:intergenic | 35.0% |
| ! | CACATCATGCTTCCAATTTT+GGG | + | Chr8:38716513-38716532 | MsG0880044257.01.T01:intron | 35.0% |
| ! | CATCAACTTTTCTTCTTCCA+AGG | + | Chr8:38714753-38714772 | MsG0880044257.01.T01:CDS | 35.0% |
| ! | GCTTTTTGTTCCAGCTATTA+CGG | - | Chr8:38715771-38715790 | None:intergenic | 35.0% |
| ! | TTGGCAAAGTGACTCATTTT+GGG | + | Chr8:38715981-38716000 | MsG0880044257.01.T01:CDS | 35.0% |
| ! | TTTGGCAAAGTGACTCATTT+TGG | + | Chr8:38715980-38715999 | MsG0880044257.01.T01:CDS | 35.0% |
| AAACCACTACTACAGATCAC+AGG | - | Chr8:38715698-38715717 | None:intergenic | 40.0% | |
| AAATCAGTTACAGCGGTGAA+CGG | - | Chr8:38715070-38715089 | None:intergenic | 40.0% | |
| AACCACTACTACAGATCACA+GGG | - | Chr8:38715697-38715716 | None:intergenic | 40.0% | |
| AATCAACCGGAAAATGACGT+CGG | - | Chr8:38714995-38715014 | None:intergenic | 40.0% | |
| AATGGGAAGAATCTTTGTGG+TGG | + | Chr8:38715395-38715414 | MsG0880044257.01.T01:CDS | 40.0% | |
| AGGGAAGGAACTTATGAGTA+TGG | + | Chr8:38716632-38716651 | MsG0880044257.01.T01:CDS | 40.0% | |
| CTAGAGCTGAATCATGTGAT+TGG | + | Chr8:38716050-38716069 | MsG0880044257.01.T01:CDS | 40.0% | |
| CTTCAAATGAGCACTCTCAA+AGG | + | Chr8:38716311-38716330 | MsG0880044257.01.T01:CDS | 40.0% | |
| CTTGTCCTCAAGATTGTAGA+AGG | - | Chr8:38716089-38716108 | None:intergenic | 40.0% | |
| GGATCATAGAACTTGCAAGA+TGG | - | Chr8:38716252-38716271 | None:intergenic | 40.0% | |
| TAAGTTCCTTCCCTCCAATT+TGG | - | Chr8:38716626-38716645 | None:intergenic | 40.0% | |
| TACAATCTTGAGGACAAGCT+TGG | + | Chr8:38716091-38716110 | MsG0880044257.01.T01:CDS | 40.0% | |
| TATCCTTCTGCAGTAGAGTT+TGG | - | Chr8:38716273-38716292 | None:intergenic | 40.0% | |
| TCAAAAGCTCAGTACTCTTC+TGG | - | Chr8:38716840-38716859 | None:intergenic | 40.0% | |
| TGCAGATGATCTCATTTCTC+GGG | + | Chr8:38715470-38715489 | MsG0880044257.01.T01:CDS | 40.0% | |
| ! | CCAAAATTGGAAGCATGATG+TGG | - | Chr8:38716515-38716534 | None:intergenic | 40.0% |
| ! | CCACATCATGCTTCCAATTT+TGG | + | Chr8:38716512-38716531 | MsG0880044257.01.T01:intron | 40.0% |
| ! | GAGGAGGGAAATCACATTTT+TGG | + | Chr8:38715962-38715981 | MsG0880044257.01.T01:CDS | 40.0% |
| ! | GTGTGTTATTACAATCCTGG+AGG | + | Chr8:38716479-38716498 | MsG0880044257.01.T01:intron | 40.0% |
| ! | TCTCAAAGGAAGCATGTCAT+GGG | + | Chr8:38716325-38716344 | MsG0880044257.01.T01:CDS | 40.0% |
| !! | GTCATTTTCCGGTTGATTCA+CGG | + | Chr8:38714997-38715016 | MsG0880044257.01.T01:intron | 40.0% |
| !!! | CTTTTTTTGTTCAGGCTGCT+AGG | + | Chr8:38715155-38715174 | MsG0880044257.01.T01:intron | 40.0% |
| AAATCTGCTCCTACTACTGG+AGG | + | Chr8:38715178-38715197 | MsG0880044257.01.T01:CDS | 45.0% | |
| AACGCGGAATAGGAATTGTG+GGG | - | Chr8:38714683-38714702 | None:intergenic | 45.0% | |
| AAGAATGCTTTGCAGCAACG+CGG | - | Chr8:38714699-38714718 | None:intergenic | 45.0% | |
| ACAGTGAGATCCGTAATAGC+TGG | + | Chr8:38715758-38715777 | MsG0880044257.01.T01:intron | 45.0% | |
| ACGAAATTACCGAAGTGCGA+CGG | - | Chr8:38715236-38715255 | None:intergenic | 45.0% | |
| ACTGTTGACATCGAGGAGAA+TGG | + | Chr8:38716760-38716779 | MsG0880044257.01.T01:intron | 45.0% | |
| AGGAAATCTGCTCCTACTAC+TGG | + | Chr8:38715175-38715194 | MsG0880044257.01.T01:CDS | 45.0% | |
| ATCAATCGAAGGCCCTAGTA+TGG | - | Chr8:38715731-38715750 | None:intergenic | 45.0% | |
| ATCGCAAAGACAGAGAGAGA+AGG | - | Chr8:38714725-38714744 | None:intergenic | 45.0% | |
| CAACGCGGAATAGGAATTGT+GGG | - | Chr8:38714684-38714703 | None:intergenic | 45.0% | |
| CTGTTGACATCGAGGAGAAT+GGG | + | Chr8:38716761-38716780 | MsG0880044257.01.T01:intron | 45.0% | |
| GAACTCAACTGTTGACATCG+AGG | + | Chr8:38716753-38716772 | MsG0880044257.01.T01:intron | 45.0% | |
| GATCCAAACTCTACTGCAGA+AGG | + | Chr8:38716267-38716286 | MsG0880044257.01.T01:CDS | 45.0% | |
| GGAAAATGACGTCGGAGTTA+CGG | - | Chr8:38714987-38715006 | None:intergenic | 45.0% | |
| GGGATTTGTACATCCACTCA+AGG | + | Chr8:38716781-38716800 | MsG0880044257.01.T01:intron | 45.0% | |
| TCGCAAAGACAGAGAGAGAA+GGG | - | Chr8:38714724-38714743 | None:intergenic | 45.0% | |
| ! | AAGAATCTTTGTGGTGGAGC+TGG | + | Chr8:38715401-38715420 | MsG0880044257.01.T01:CDS | 45.0% |
| ! | CTCTCAAAGGAAGCATGTCA+TGG | + | Chr8:38716324-38716343 | MsG0880044257.01.T01:CDS | 45.0% |
| !! | ATTTTCCGGTTGATTCACGG+CGG | + | Chr8:38715000-38715019 | MsG0880044257.01.T01:intron | 45.0% |
| !! | CTCATTTTTCGTGCCACTGT+TGG | + | Chr8:38716382-38716401 | MsG0880044257.01.T01:CDS | 45.0% |
| !! | GTAACTCCGACGTCATTTTC+CGG | + | Chr8:38714986-38715005 | MsG0880044257.01.T01:intron | 45.0% |
| !! | TACATCCACTCAAGGTGTTG+TGG | + | Chr8:38716789-38716808 | MsG0880044257.01.T01:intron | 45.0% |
| !!! | ACGGTAACGGTGAGGTTTTT+TGG | - | Chr8:38715206-38715225 | None:intergenic | 45.0% |
| !!! | TTTTTGGCTCCTCCAGTAGT+AGG | - | Chr8:38715190-38715209 | None:intergenic | 45.0% |
| ATTCGCGGTGAACGTGCTTA+GGG | + | Chr8:38717055-38717074 | MsG0880044257.01.T01:CDS | 50.0% | |
| CACCCTGTGATCTGTAGTAG+TGG | + | Chr8:38715692-38715711 | MsG0880044257.01.T01:intron | 50.0% | |
| CACTACTACAGATCACAGGG+TGG | - | Chr8:38715694-38715713 | None:intergenic | 50.0% | |
| GACGCTGAAATGGAAGCTTG+CGG | - | Chr8:38716864-38716883 | None:intergenic | 50.0% | |
| GCAACGCGGAATAGGAATTG+TGG | - | Chr8:38714685-38714704 | None:intergenic | 50.0% | |
| TCACGGACAAGACGCTGAAA+TGG | - | Chr8:38716874-38716893 | None:intergenic | 50.0% | |
| ! | AATCTTTGTGGTGGAGCTGG+AGG | + | Chr8:38715404-38715423 | MsG0880044257.01.T01:CDS | 50.0% |
| ! | AGACGGATCTGAGATTCCAG+AGG | + | Chr8:38717012-38717031 | MsG0880044257.01.T01:intron | 50.0% |
| ! | AGGACATTCAGCTTGCTCGT+CGG | + | Chr8:38717032-38717051 | MsG0880044257.01.T01:CDS | 50.0% |
| ! | ATCTTTGTGGTGGAGCTGGA+GGG | + | Chr8:38715405-38715424 | MsG0880044257.01.T01:CDS | 50.0% |
| ! | GGACAAGCTTGGTCTTCATG+CGG | + | Chr8:38716102-38716121 | MsG0880044257.01.T01:CDS | 50.0% |
| !! | TTTTCCGGTTGATTCACGGC+GGG | + | Chr8:38715001-38715020 | MsG0880044257.01.T01:intron | 50.0% |
| !!! | AGGGTGGTGAAGGTGCTTTT+AGG | + | Chr8:38717074-38717093 | MsG0880044257.01.T01:CDS | 50.0% |
| !!! | GGGTGGTGAAGGTGCTTTTA+GGG | + | Chr8:38717075-38717094 | MsG0880044257.01.T01:CDS | 50.0% |
| AAACCTCACCGTTACCGTCC+TGG | + | Chr8:38715208-38715227 | MsG0880044257.01.T01:CDS | 55.0% | |
| CAATCCCGCCGTGAATCAAC+CGG | - | Chr8:38715008-38715027 | None:intergenic | 55.0% | |
| CGAGCAAGCTGAATGTCCTC+TGG | - | Chr8:38717031-38717050 | None:intergenic | 55.0% | |
| GAACGTGCTTAGGGTGGTGA+AGG | + | Chr8:38717064-38717083 | MsG0880044257.01.T01:CDS | 55.0% | |
| GATTCGCGGTGAACGTGCTT+AGG | + | Chr8:38717054-38717073 | MsG0880044257.01.T01:CDS | 55.0% | |
| GCTTTGCAGCAACGCGGAAT+AGG | - | Chr8:38714693-38714712 | None:intergenic | 55.0% | |
| GTGAACGGTGGTTACCTTGG+TGG | - | Chr8:38715055-38715074 | None:intergenic | 55.0% | |
| TCAGTTACAGCGGTGAACGG+TGG | - | Chr8:38715067-38715086 | None:intergenic | 55.0% | |
| TGCTGCCACAACACCTTGAG+TGG | - | Chr8:38716797-38716816 | None:intergenic | 55.0% | |
| ! | TGTGGGAAGCATATGCCTCC+AGG | - | Chr8:38716497-38716516 | None:intergenic | 55.0% |
| AAGGAAGCAGCTCGCCACCA+AGG | + | Chr8:38715038-38715057 | MsG0880044257.01.T01:intron | 60.0% | |
| CGACGGTTCCAGGACGGTAA+CGG | - | Chr8:38715219-38715238 | None:intergenic | 60.0% | |
| GAAGTGCGACGGTTCCAGGA+CGG | - | Chr8:38715225-38715244 | None:intergenic | 60.0% | |
| GCGAGCTGCTTCCTTGGAGT+AGG | - | Chr8:38715033-38715052 | None:intergenic | 60.0% | |
| GCGGTGAACGGTGGTTACCT+TGG | - | Chr8:38715058-38715077 | None:intergenic | 60.0% | |
| GTCCTGGAACCGTCGCACTT+CGG | + | Chr8:38715224-38715243 | MsG0880044257.01.T01:CDS | 60.0% | |
| TACCGAAGTGCGACGGTTCC+AGG | - | Chr8:38715229-38715248 | None:intergenic | 60.0% | |
| ! | CAGCTTGCTCGTCGGATTCG+CGG | + | Chr8:38717040-38717059 | MsG0880044257.01.T01:CDS | 60.0% |
| ! | GTTCCAGGACGGTAACGGTG+AGG | - | Chr8:38715214-38715233 | None:intergenic | 60.0% |
| !! | TTGGTGGCGAGCTGCTTCCT+TGG | - | Chr8:38715039-38715058 | None:intergenic | 60.0% |
| CGCGGTGAACGTGCTTAGGG+TGG | + | Chr8:38717058-38717077 | MsG0880044257.01.T01:CDS | 65.0% | |
| GCGGGATTGCGCCTACTCCA+AGG | + | Chr8:38715019-38715038 | MsG0880044257.01.T01:intron | 65.0% | |
| ! | TTGTGGTGGAGCTGGAGGGC+AGG | + | Chr8:38715409-38715428 | MsG0880044257.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 38714655 | 38717103 | 38714655 | ID=MsG0880044257.01;Name=MsG0880044257.01 |
| Chr8 | mRNA | 38714655 | 38717103 | 38714655 | ID=MsG0880044257.01.T01;Parent=MsG0880044257.01;Name=MsG0880044257.01.T01;_AED=0.64;_eAED=0.71;_QI=0|0|0|0.42|1|1|7|0|387 |
| Chr8 | exon | 38714655 | 38714774 | 38714655 | ID=MsG0880044257.01.T01:exon:2482;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38715169 | 38715245 | 38715169 | ID=MsG0880044257.01.T01:exon:2481;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38715389 | 38715491 | 38715389 | ID=MsG0880044257.01.T01:exon:2480;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38715926 | 38716476 | 38715926 | ID=MsG0880044257.01.T01:exon:2479;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38716559 | 38716709 | 38716559 | ID=MsG0880044257.01.T01:exon:2478;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38716841 | 38716912 | 38716841 | ID=MsG0880044257.01.T01:exon:2477;Parent=MsG0880044257.01.T01 |
| Chr8 | exon | 38717014 | 38717103 | 38717014 | ID=MsG0880044257.01.T01:exon:2476;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38714655 | 38714774 | 38714655 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38715169 | 38715245 | 38715169 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38715389 | 38715491 | 38715389 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38715926 | 38716476 | 38715926 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38716559 | 38716709 | 38716559 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38716841 | 38716912 | 38716841 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Chr8 | CDS | 38717014 | 38717103 | 38717014 | ID=MsG0880044257.01.T01:cds;Parent=MsG0880044257.01.T01 |
| Gene Sequence |
| Protein sequence |
