AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037146.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037146.01.T01 MTR_7g028970 81.739 575 20 5 1 490 1 575 0.0 897
MsG0780037146.01.T01 MTR_4g109450 72.348 575 74 5 1 490 1 575 0.0 796
MsG0780037146.01.T01 MTR_4g109450 72.348 575 74 5 1 490 1 575 0.0 796
MsG0780037146.01.T01 MTR_7g012820 40.306 588 248 9 4 497 15 593 2.50e-134 411
MsG0780037146.01.T01 MTR_7g012820 40.306 588 248 9 4 497 86 664 1.89e-133 410
MsG0780037146.01.T01 MTR_6g013660 39.932 591 246 11 4 497 82 660 1.72e-129 400
MsG0780037146.01.T01 MTR_3g106160 40.217 552 227 9 33 490 123 665 6.09e-118 370
MsG0780037146.01.T01 MTR_3g498725 45.330 364 155 6 147 490 270 609 4.13e-91 298
MsG0780037146.01.T01 MTR_8g100040 43.750 368 155 6 147 490 274 613 9.70e-91 296
MsG0780037146.01.T01 MTR_3g102830 43.750 368 155 8 147 490 275 614 3.13e-87 287
MsG0780037146.01.T01 MTR_3g098310 38.441 372 171 8 148 490 314 656 6.74e-70 238
MsG0780037146.01.T01 MTR_3g098310 38.710 372 170 9 148 490 314 656 4.35e-69 238
MsG0780037146.01.T01 MTR_3g461000 31.043 393 208 7 17 349 16 405 7.86e-52 188
MsG0780037146.01.T01 MTR_2g099075 65.385 130 41 1 361 490 50 175 3.09e-43 160
MsG0780037146.01.T01 MTR_2g006950 60.000 115 35 2 376 490 1 104 1.09e-31 129
MsG0780037146.01.T01 MTR_6g048860 49.138 116 40 2 147 244 151 265 1.61e-28 116
MsG0780037146.01.T01 MTR_7g096480 73.684 57 15 0 445 501 1 57 9.28e-20 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037146.01.T01 AT1G74310 66.839 579 104 6 1 494 1 576 0.0 740
MsG0780037146.01.T01 AT1G74310 66.839 579 104 6 1 494 1 576 0.0 739
MsG0780037146.01.T01 AT4G14670 53.229 573 163 6 1 497 1 544 0.0 539
MsG0780037146.01.T01 AT5G15450 39.896 579 249 9 4 490 80 651 6.07e-129 399
MsG0780037146.01.T01 AT2G25140 39.966 588 255 11 1 497 83 663 1.69e-119 374
MsG0780037146.01.T01 AT5G50920 43.733 375 159 6 147 497 272 618 3.04e-90 295
MsG0780037146.01.T01 AT3G48870 43.968 373 161 7 147 497 262 608 7.49e-88 289
MsG0780037146.01.T01 AT3G48870 43.968 373 161 7 147 497 293 639 1.36e-87 289
MsG0780037146.01.T01 AT3G48870 43.968 373 161 7 147 497 293 639 1.36e-87 289
MsG0780037146.01.T01 AT3G48870 43.968 373 161 7 147 497 293 639 1.36e-87 289
MsG0780037146.01.T01 AT5G51070 40.872 367 170 9 148 490 287 630 2.20e-71 244
MsG0780037146.01.T01 AT3G45450 42.614 176 80 4 139 302 143 309 7.31e-34 131

Find 146 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAATTGATCGATTGATTT+TGG 0.076721 7:+20640353 MsG0780037146.01.T01:CDS
CCAATCTTTCTTTATCATTT+TGG 0.106978 7:-20642305 None:intergenic
CTTAAAAGCAATAATTATTT+TGG 0.164716 7:-20644008 None:intergenic
TTGATAATGGAAGAGCTTTC+TGG 0.214612 7:-20640279 None:intergenic
AGCTATCTATGATGCTTATA+AGG 0.230297 7:+20643559 MsG0780037146.01.T01:three_prime_UTR
TTACTTACAAAAGATGCTTT+AGG 0.252656 7:+20643922 MsG0780037146.01.T01:three_prime_UTR
GGGAAACTTGATCCTGTTAT+TGG 0.273106 7:+20640553 MsG0780037146.01.T01:intron
AATCTGGTGTGGCTGCTTCT+AGG 0.276407 7:+20640415 MsG0780037146.01.T01:CDS
TTCTCAAGCCACCTTCTAAT+TGG 0.289169 7:-20643522 None:intergenic
TAGGTTATTTGCTTTGGATA+TGG 0.298718 7:+20640734 MsG0780037146.01.T01:intron
TACTTACAAAAGATGCTTTA+GGG 0.299777 7:+20643923 MsG0780037146.01.T01:three_prime_UTR
AAGAACAATCCTGTTATTAT+AGG 0.300913 7:+20640625 MsG0780037146.01.T01:CDS
TGCTTCTAGGGTTAAATTAG+AGG 0.305282 7:+20640428 MsG0780037146.01.T01:CDS
GATGAAATTCATCTTGTTCT+CGG 0.335841 7:+20640861 MsG0780037146.01.T01:CDS
ACTAAATCAATTGCCTTATC+AGG 0.337759 7:-20641544 None:intergenic
AGGTTATTTGCTTTGGATAT+GGG 0.347039 7:+20640735 MsG0780037146.01.T01:intron
AGTCGCTGGTACTCAGTATA+GGG 0.347042 7:+20640764 MsG0780037146.01.T01:CDS
TGATGTTAGGTTATTTGCTT+TGG 0.368946 7:+20640728 MsG0780037146.01.T01:intron
TCTTTCAATGACTTTGATAA+TGG 0.377205 7:-20640292 None:intergenic
TTTATCGTTGTGCAGGTGTA+TGG 0.379532 7:+20643492 MsG0780037146.01.T01:intron
ATATCGTAGGTCTGCAGCTC+TGG 0.383932 7:-20642127 None:intergenic
TCCTCATCACGTCCAATAAC+AGG 0.384275 7:-20640565 None:intergenic
ATTCATCTTGTTCTCGGTGC+TGG 0.396509 7:+20640867 MsG0780037146.01.T01:CDS
CCTGGCTCACCTATAATAAC+AGG 0.397627 7:-20640634 None:intergenic
GCAGACTTGTTGACAGAATC+TGG 0.398994 7:+20640399 MsG0780037146.01.T01:CDS
CGAAGAATACTAATGGTATC+AGG 0.403438 7:-20641059 None:intergenic
CACCGACATTGGAAATTGCT+TGG 0.405651 7:-20640170 None:intergenic
ATGTCTAGTCGGTACATAAC+TGG 0.411033 7:+20641155 MsG0780037146.01.T01:CDS
TAATCCACGAAGAATACTAA+TGG 0.414662 7:-20641066 None:intergenic
GTCACGCGGCGACACTCATT+TGG 0.416515 7:+20640332 MsG0780037146.01.T01:CDS
TAGTCGCTGGTACTCAGTAT+AGG 0.418958 7:+20640763 MsG0780037146.01.T01:CDS
CAACAACACTTGATGAATAT+AGG 0.419042 7:+20640967 MsG0780037146.01.T01:CDS
ATCTGGTGTGGCTGCTTCTA+GGG 0.427152 7:+20640416 MsG0780037146.01.T01:CDS
TTGCAATTTCCATACATTCA+AGG 0.433163 7:-20643842 None:intergenic
CCAAAATGATAAAGAAAGAT+TGG 0.433655 7:+20642305 MsG0780037146.01.T01:CDS
TAGTATAGTCCTTGAATGTA+TGG 0.436253 7:+20643833 MsG0780037146.01.T01:three_prime_UTR
GATACCATTAGTATTCTTCG+TGG 0.438229 7:+20641062 MsG0780037146.01.T01:CDS
GCTATCTATGATGCTTATAA+GGG 0.445749 7:+20643560 MsG0780037146.01.T01:three_prime_UTR
CAGCGACAGCTTTAACTGCT+TGG 0.449855 7:-20642370 None:intergenic
ACTTTAATTTCTGATCTCAA+TGG 0.452305 7:+20640138 MsG0780037146.01.T01:CDS
TATACCAAATCACTTCCCTT+TGG 0.459313 7:-20643624 None:intergenic
TGACGAAGGTGGACAATTAA+CGG 0.460785 7:+20642920 MsG0780037146.01.T01:three_prime_UTR
TTATCGTTGTGCAGGTGTAT+GGG 0.466125 7:+20643493 MsG0780037146.01.T01:intron
ACAACCTCAGCTATTTGATC+TGG 0.466362 7:-20642246 None:intergenic
ATTTGAAAGGAGGTTTCAAC+AGG 0.467761 7:+20641013 MsG0780037146.01.T01:CDS
TGGTCCAAAGGGAAGTGATT+TGG 0.469216 7:+20643620 MsG0780037146.01.T01:three_prime_UTR
AGAGCTCCTCTTTGCACTAC+AGG 0.471282 7:+20642080 MsG0780037146.01.T01:CDS
AGAGCTGCAGACCTACGATA+TGG 0.473492 7:+20642129 MsG0780037146.01.T01:CDS
AATCTTGAAGGTAGCACTGA+TGG 0.474434 7:+20642183 MsG0780037146.01.T01:CDS
GGGATTGTTGATGCTGAAAC+TGG 0.476859 7:+20643666 MsG0780037146.01.T01:three_prime_UTR
AGGGCGTCGTCTTCCTGATA+AGG 0.483337 7:+20641531 MsG0780037146.01.T01:intron
AATGATAAAGAAAGATTGGT+TGG 0.485880 7:+20642309 MsG0780037146.01.T01:CDS
AGAAAACTAGCAATAAGTTC+AGG 0.485939 7:+20640081 MsG0780037146.01.T01:CDS
TCTGGTACATGCTGTGGTGG+AGG 0.490797 7:-20640261 None:intergenic
ATAGGGGACAATTTGAAGAA+AGG 0.491092 7:+20640781 MsG0780037146.01.T01:CDS
CAAGCAGTTAAAGCTGTCGC+TGG 0.493333 7:+20642371 MsG0780037146.01.T01:CDS
ACTGTAAGGCCTTCTCCTTA+CGG 0.493558 7:-20642946 None:intergenic
CTCGGTGCTGGTCGATGTCA+AGG 0.493860 7:+20640879 MsG0780037146.01.T01:CDS
AGTATAGCAAAGAGAAAGAG+AGG 0.498177 7:+20642022 MsG0780037146.01.T01:CDS
ATATAGGCAATATGTTGAAA+AGG 0.498900 7:+20640983 MsG0780037146.01.T01:CDS
TTGCTATACTTCATCTTCAG+AGG 0.500208 7:-20642009 None:intergenic
AGGTCATTGGCGATGATGAA+TGG 0.502363 7:+20643755 MsG0780037146.01.T01:three_prime_UTR
CCTGTTATTATAGGTGAGCC+AGG 0.503359 7:+20640634 MsG0780037146.01.T01:CDS
GACGTGATGAGGAGATAAGA+AGG 0.508434 7:+20640575 MsG0780037146.01.T01:CDS
GACAATTAACGGAAGCCGTA+AGG 0.509021 7:+20642931 MsG0780037146.01.T01:three_prime_UTR
TTCCAAGCAATTTCCAATGT+CGG 0.510415 7:+20640168 MsG0780037146.01.T01:CDS
TAAAGTGGATGCAAGGTGTA+CGG 0.516884 7:-20640121 None:intergenic
CTAATGGTATCAGGCACACT+AGG 0.517122 7:-20641050 None:intergenic
AAGCAGTTAAAGCTGTCGCT+GGG 0.520029 7:+20642372 MsG0780037146.01.T01:CDS
TGCTTCAAGTCTTAGATGAC+GGG 0.522426 7:+20643021 MsG0780037146.01.T01:three_prime_UTR
TAAACGAGTCACTGGTATAC+CGG 0.522890 7:-20642280 None:intergenic
AAAGAAAGATTGGTTGGACT+TGG 0.526948 7:+20642315 MsG0780037146.01.T01:CDS
ACAATTTGAAGAAAGGTTGA+AGG 0.528800 7:+20640788 MsG0780037146.01.T01:CDS
GGTATACCAGTGACTCGTTT+AGG 0.529289 7:+20642282 MsG0780037146.01.T01:CDS
AAAGTGGATGCAAGGTGTAC+GGG 0.529432 7:-20640120 None:intergenic
GAGAAATACGAGGGTCATCA+TGG 0.530329 7:+20641092 MsG0780037146.01.T01:CDS
TTGATGCTGACGGAAATTGT+TGG 0.531346 7:+20642222 MsG0780037146.01.T01:CDS
ATTGAGATCAGAAATTAAAG+TGG 0.531542 7:-20640136 None:intergenic
AGGAGATAAGAAGGGTTGTG+AGG 0.534655 7:+20640584 MsG0780037146.01.T01:CDS
GGTAAAACAGCTGTTGTTGA+AGG 0.536011 7:+20640661 MsG0780037146.01.T01:CDS
GATATGGGAGCGTTAGTCGC+TGG 0.541820 7:+20640750 MsG0780037146.01.T01:CDS
GCAAGTATATAATCTAGTGC+TGG 0.545509 7:-20643349 None:intergenic
ATTATAGGTGAGCCAGGTGT+TGG 0.546216 7:+20640640 MsG0780037146.01.T01:CDS
TGCATTGATGCTGGTCCAAA+GGG 0.546349 7:+20643609 MsG0780037146.01.T01:three_prime_UTR
AAAAGGATGCTGCATTTGAA+AGG 0.550728 7:+20641000 MsG0780037146.01.T01:CDS
AGTGGAAGATGCTGAAGGGA+AGG 0.551183 7:+20640824 MsG0780037146.01.T01:CDS
GAAAATGGATATGAGGTCAT+TGG 0.551709 7:+20643742 MsG0780037146.01.T01:three_prime_UTR
GTATACCGTGTGGAAAAGAA+TGG 0.554197 7:+20643642 MsG0780037146.01.T01:three_prime_UTR
TGACGAATCTGCACGTTCCG+TGG 0.559545 7:+20640194 MsG0780037146.01.T01:CDS
AGGATGCTGCATTTGAAAGG+AGG 0.560849 7:+20641003 MsG0780037146.01.T01:CDS
ATGGGGCTAGACCAATTAGA+AGG 0.560996 7:+20643511 MsG0780037146.01.T01:three_prime_UTR
TAACGGAAGCCGTAAGGAGA+AGG 0.562264 7:+20642937 MsG0780037146.01.T01:three_prime_UTR
CTGCTTCAAGTCTTAGATGA+CGG 0.564051 7:+20643020 MsG0780037146.01.T01:three_prime_UTR
AAGAAGTGGAAGATGCTGAA+GGG 0.565725 7:+20640820 MsG0780037146.01.T01:CDS
CAAGCAATTTCCAATGTCGG+TGG 0.569212 7:+20640171 MsG0780037146.01.T01:CDS
TATCGTTGTGCAGGTGTATG+GGG 0.570842 7:+20643494 MsG0780037146.01.T01:intron
CAAAGTCATTGAAAGAGCAC+AGG 0.574398 7:+20640299 MsG0780037146.01.T01:CDS
AGATTCGTCACCACCGACAT+TGG 0.576451 7:-20640181 None:intergenic
ATCTTGAAGGTAGCACTGAT+GGG 0.576475 7:+20642184 MsG0780037146.01.T01:CDS
AGGACTATACTAACAGCCTA+AGG 0.576944 7:-20643822 None:intergenic
CGTGGACAACTTAGATGCAT+CGG 0.576960 7:+20640942 MsG0780037146.01.T01:CDS
CAGAAATTAAAGTGGATGCA+AGG 0.580621 7:-20640128 None:intergenic
TTCAAACCTATGCTTGCTCG+TGG 0.581065 7:+20640924 MsG0780037146.01.T01:CDS
GGCAATTGATTTAGTTGACG+AGG 0.581345 7:+20641552 MsG0780037146.01.T01:CDS
GAGGTTGTAAGCCGATGGAC+CGG 0.583520 7:+20642261 MsG0780037146.01.T01:CDS
AGTTGTCCACGAGCAAGCAT+AGG 0.583829 7:-20640930 None:intergenic
TAGCTGAGGTTGTAAGCCGA+TGG 0.585089 7:+20642256 MsG0780037146.01.T01:CDS
GAGCTTTCTGGTACATGCTG+TGG 0.588543 7:-20640267 None:intergenic
GGTTGGTGAAAATGGATATG+AGG 0.588562 7:+20643735 MsG0780037146.01.T01:three_prime_UTR
CTTTCTGGTACATGCTGTGG+TGG 0.588981 7:-20640264 None:intergenic
ATATGGTGCAATTGAAGAGG+TGG 0.594534 7:+20642146 MsG0780037146.01.T01:CDS
TGGTCGATGTCAAGGATCAA+TGG 0.595645 7:+20640887 MsG0780037146.01.T01:CDS
ACGTGATGAGGAGATAAGAA+GGG 0.598173 7:+20640576 MsG0780037146.01.T01:CDS
CAGATTGCACAGTAGAGTTG+TGG 0.601167 7:+20642341 MsG0780037146.01.T01:CDS
ACAACTGTATGCATTGATGC+TGG 0.605777 7:+20643600 MsG0780037146.01.T01:three_prime_UTR
TACCGTGTGGAAAAGAATGG+AGG 0.607054 7:+20643645 MsG0780037146.01.T01:three_prime_UTR
AAAGAAGTGGAAGATGCTGA+AGG 0.609450 7:+20640819 MsG0780037146.01.T01:CDS
CAGCCTCCTGTAGTGCAAAG+AGG 0.611133 7:-20642086 None:intergenic
ATGCATTGATGCTGGTCCAA+AGG 0.614033 7:+20643608 MsG0780037146.01.T01:three_prime_UTR
ACCGTGTGGAAAAGAATGGA+GGG 0.614544 7:+20643646 MsG0780037146.01.T01:three_prime_UTR
TGTGGTGGAGGCTGTTGAGT+AGG 0.617546 7:-20640249 None:intergenic
GGTAGCACTGATGGGAACAA+AGG 0.620040 7:+20642192 MsG0780037146.01.T01:CDS
ACGATATGGTGCAATTGAAG+AGG 0.629693 7:+20642143 MsG0780037146.01.T01:CDS
TTGCAGCTCAGATGTCTAGT+CGG 0.630610 7:+20641144 MsG0780037146.01.T01:CDS
TCACTGGTATACCGGTCCAT+CGG 0.631048 7:-20642272 None:intergenic
CTTCAATTGCACCATATCGT+AGG 0.632100 7:-20642140 None:intergenic
GTAAAACAGCTGTTGTTGAA+GGG 0.633556 7:+20640662 MsG0780037146.01.T01:CDS
TCCTGTTATTGGACGTGATG+AGG 0.634585 7:+20640564 MsG0780037146.01.T01:CDS
TATATTGGACATGACGAAGG+TGG 0.635832 7:+20642909 MsG0780037146.01.T01:three_prime_UTR
AGGTATATTGGACATGACGA+AGG 0.636676 7:+20642906 MsG0780037146.01.T01:intron
GAGCTGCAACAACAATTGCA+CGG 0.636905 7:-20641130 None:intergenic
AGAGAAAGAGAGGATTGATG+AGG 0.639029 7:+20642032 MsG0780037146.01.T01:CDS
GTCGCTGGTACTCAGTATAG+GGG 0.640895 7:+20640765 MsG0780037146.01.T01:CDS
AGGTGAGAACTTGATGCTGA+CGG 0.642271 7:+20642212 MsG0780037146.01.T01:CDS
CAGGAAGCACAGAAGTCACG+CGG 0.664958 7:+20640318 MsG0780037146.01.T01:CDS
CACTACAGGAGGCTGAGAGG+CGG 0.665779 7:+20642094 MsG0780037146.01.T01:CDS
TGGACCAGATCAAATAGCTG+AGG 0.666193 7:+20642242 MsG0780037146.01.T01:CDS
GCTCCTCTTTGCACTACAGG+AGG 0.670257 7:+20642083 MsG0780037146.01.T01:CDS
CTTGTTGACAGAATCTGGTG+TGG 0.670357 7:+20640404 MsG0780037146.01.T01:CDS
TTGCACTACAGGAGGCTGAG+AGG 0.672526 7:+20642091 MsG0780037146.01.T01:CDS
GGGCTAGACCAATTAGAAGG+TGG 0.678756 7:+20643514 MsG0780037146.01.T01:three_prime_UTR
AAGTGATTTGGTATACCGTG+TGG 0.679627 7:+20643632 MsG0780037146.01.T01:three_prime_UTR
AGCAGTTAAAGCTGTCGCTG+GGG 0.679969 7:+20642373 MsG0780037146.01.T01:CDS
GGATTAAAAGAGAAATACGA+GGG 0.707912 7:+20641083 MsG0780037146.01.T01:CDS
AAGGTGGCTTGAGAAGAATG+TGG 0.734759 7:+20643530 MsG0780037146.01.T01:three_prime_UTR
TGGATTAAAAGAGAAATACG+AGG 0.736615 7:+20641082 MsG0780037146.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATGGAATTAAAAAA+TGG + Chr7:20645265-20645284 MsG0780037146.01.T01:intron 10.0%
!! AGTATTTAAAAATTGTAAAT+TGG - Chr7:20646900-20646919 None:intergenic 10.0%
!!! TAATGATGTAATTTTAATTA+TGG + Chr7:20646844-20646863 MsG0780037146.01.T01:intron 10.0%
!! AAAAAATGGTTGAAAATTAA+GGG + Chr7:20645279-20645298 MsG0780037146.01.T01:intron 15.0%
!! ATAAAAACATGTTATATTTG+AGG + Chr7:20643428-20643447 MsG0780037146.01.T01:intron 15.0%
!! ATTAAAATTACATCATTAAG+TGG - Chr7:20646842-20646861 None:intergenic 15.0%
!! TAAAAAATGGTTGAAAATTA+AGG + Chr7:20645278-20645297 MsG0780037146.01.T01:intron 15.0%
!! TAAAAACATGTTATATTTGA+GGG + Chr7:20643429-20643448 MsG0780037146.01.T01:intron 15.0%
!! TAAAGTTAATTGCTAAAAAA+TGG + Chr7:20645316-20645335 MsG0780037146.01.T01:intron 15.0%
!! TCTTTAAATATTTCAAATGT+CGG + Chr7:20642711-20642730 MsG0780037146.01.T01:intron 15.0%
!! TTTATCTCCAAATATAATTT+AGG - Chr7:20642648-20642667 None:intergenic 15.0%
!!! AACAGATTTATTGATTTTAT+TGG + Chr7:20641393-20641412 MsG0780037146.01.T01:intron 15.0%
!!! ATCATTGAAATAATTTTTGA+AGG + Chr7:20645523-20645542 MsG0780037146.01.T01:intron 15.0%
!!! GATAAAACATTTAATTTGTT+TGG + Chr7:20642662-20642681 MsG0780037146.01.T01:intron 15.0%
!!! TCTTTTAAAAAACAAAATCA+TGG - Chr7:20645485-20645504 None:intergenic 15.0%
!!! TGAAATTAAATTGTGTATTT+TGG - Chr7:20644575-20644594 None:intergenic 15.0%
!!! TTTGAATTTTTTTTTCTTCT+CGG + Chr7:20644211-20644230 MsG0780037146.01.T01:intron 15.0%
!! AAAAACATGTTATATTTGAG+GGG + Chr7:20643430-20643449 MsG0780037146.01.T01:intron 20.0%
!! AAAATTAAATCACATTGACA+TGG + Chr7:20644817-20644836 MsG0780037146.01.T01:intron 20.0%
!! AACAAATTAAAGAAAACAGA+TGG - Chr7:20641211-20641230 None:intergenic 20.0%
!! AAGTCTAAACAAGTATTAAT+AGG - Chr7:20642818-20642837 None:intergenic 20.0%
!! AATGCAATAAAAAATCTTGA+AGG + Chr7:20642171-20642190 MsG0780037146.01.T01:CDS 20.0%
!! AATTGGATAAAATTAGACTT+TGG - Chr7:20644536-20644555 None:intergenic 20.0%
!! AGTGAGATAATAAATAGTTA+CGG + Chr7:20641333-20641352 MsG0780037146.01.T01:intron 20.0%
!! ATCTTAAAACAGAAGTTAAA+AGG + Chr7:20641425-20641444 MsG0780037146.01.T01:intron 20.0%
!! ATTACACAGAAAATTGTTTA+AGG + Chr7:20645930-20645949 MsG0780037146.01.T01:intron 20.0%
!! ATTATTGCATTACACTTTAA+AGG - Chr7:20641270-20641289 None:intergenic 20.0%
!! GTAAAAGCCTAAATTATATT+TGG + Chr7:20642638-20642657 MsG0780037146.01.T01:intron 20.0%
!! GTAAAATGAATTAATTAACC+TGG - Chr7:20647160-20647179 None:intergenic 20.0%
!! GTATATGTGATAGTATTTAA+AGG - Chr7:20647356-20647375 None:intergenic 20.0%
!! GTTATCATTAAAACTCTTTA+AGG + Chr7:20646921-20646940 MsG0780037146.01.T01:intron 20.0%
!! TATCTTATAGATAAGAAGAA+TGG + Chr7:20647216-20647235 MsG0780037146.01.T01:intron 20.0%
!! TCATTAGCAAAAAGAATTAA+AGG + Chr7:20647386-20647405 MsG0780037146.01.T01:intron 20.0%
!! TGAAATTGGATAAAATTAGA+CGG - Chr7:20644500-20644519 None:intergenic 20.0%
!!! AAGTTTAGTTTTTGTTCATA+TGG + Chr7:20644083-20644102 MsG0780037146.01.T01:intron 20.0%
!!! ATTAAATTGTGTATTTTGGA+AGG - Chr7:20644571-20644590 None:intergenic 20.0%
!!! ATTTCAAATTTGTTCTTCAT+AGG - Chr7:20646256-20646275 None:intergenic 20.0%
!!! CAATTTAATTTCAGTCATAT+TGG + Chr7:20644582-20644601 MsG0780037146.01.T01:intron 20.0%
!!! CATCTTTTGTAAGTAATTTT+TGG - Chr7:20643918-20643937 None:intergenic 20.0%
!!! CTTTGATAATGAAAATCAAA+TGG + Chr7:20642513-20642532 MsG0780037146.01.T01:intron 20.0%
!!! CTTTTTGTTTTACCTAATAA+GGG - Chr7:20647288-20647307 None:intergenic 20.0%
!!! GTCAATTGATAACTAAATAA+GGG + Chr7:20645382-20645401 MsG0780037146.01.T01:intron 20.0%
!!! TCTTTTTGTTTTACCTAATA+AGG - Chr7:20647289-20647308 None:intergenic 20.0%
!!! TGAGTTTTTCTTTTAACTAA+GGG + Chr7:20641727-20641746 MsG0780037146.01.T01:intron 20.0%
!!! TGTCAATTGATAACTAAATA+AGG + Chr7:20645381-20645400 MsG0780037146.01.T01:intron 20.0%
!!! TTGAGTTTTTCTTTTAACTA+AGG + Chr7:20641726-20641745 MsG0780037146.01.T01:intron 20.0%
!!! TTTCTGACGAAAATTTTTAT+AGG + Chr7:20644245-20644264 MsG0780037146.01.T01:intron 20.0%
! AAAAATACAATATCTTACCC+TGG - Chr7:20642601-20642620 None:intergenic 25.0%
! AAAACAGAAGTTAAAAGGAA+TGG + Chr7:20641430-20641449 MsG0780037146.01.T01:intron 25.0%
! AAAGATGACGTTAATGATAA+AGG + Chr7:20644426-20644445 MsG0780037146.01.T01:intron 25.0%
! AAGAACAATCCTGTTATTAT+AGG + Chr7:20640625-20640644 MsG0780037146.01.T01:CDS 25.0%
! AAGATGACGTTAATGATAAA+GGG + Chr7:20644427-20644446 MsG0780037146.01.T01:intron 25.0%
! AATAACCAAATTTCAAATGC+CGG - Chr7:20642766-20642785 None:intergenic 25.0%
! AATGATAAAGAAAGATTGGT+TGG + Chr7:20642309-20642328 MsG0780037146.01.T01:CDS 25.0%
! ACTAGAATAAAGGAGAATAA+TGG - Chr7:20641933-20641952 None:intergenic 25.0%
! ATATAGGCAATATGTTGAAA+AGG + Chr7:20640983-20641002 MsG0780037146.01.T01:CDS 25.0%
! ATGAGAAAAACATAGGATAA+AGG + Chr7:20647419-20647438 MsG0780037146.01.T01:intron 25.0%
! ATTGAGATCAGAAATTAAAG+TGG - Chr7:20640139-20640158 None:intergenic 25.0%
! ATTGTTTGTCATCATCAAAA+AGG - Chr7:20646983-20647002 None:intergenic 25.0%
! CCAAAATGATAAAGAAAGAT+TGG + Chr7:20642305-20642324 MsG0780037146.01.T01:CDS 25.0%
! CTCTTTCGTTATAATTTACA+CGG - Chr7:20645359-20645378 None:intergenic 25.0%
! CTTTGAACTCTTATATAGTT+TGG + Chr7:20645068-20645087 MsG0780037146.01.T01:intron 25.0%
! CTTTGTTGAGATTTATTTAC+CGG + Chr7:20642744-20642763 MsG0780037146.01.T01:intron 25.0%
! GAAGGTTATTGAAATGAAAT+TGG - Chr7:20644514-20644533 None:intergenic 25.0%
! GATAAGAGAGAACAAAAAAA+AGG - Chr7:20645197-20645216 None:intergenic 25.0%
! GTCATCAATAACTAGAATAA+AGG - Chr7:20641943-20641962 None:intergenic 25.0%
! GTTATTTAAGAAGACCTTAA+GGG + Chr7:20645443-20645462 MsG0780037146.01.T01:intron 25.0%
! TAACTAATCTCTAGTTGTTT+AGG + Chr7:20644899-20644918 MsG0780037146.01.T01:intron 25.0%
! TACTTACAAAAGATGCTTTA+GGG + Chr7:20643923-20643942 MsG0780037146.01.T01:three_prime_UTR 25.0%
! TATGTTCCTTAAAGAATAGA+CGG + Chr7:20644946-20644965 MsG0780037146.01.T01:intron 25.0%
! TCTTTCAATGACTTTGATAA+TGG - Chr7:20640295-20640314 None:intergenic 25.0%
! TTACTTACAAAAGATGCTTT+AGG + Chr7:20643922-20643941 MsG0780037146.01.T01:three_prime_UTR 25.0%
! TTGAATAAACTAACCAAGAA+TGG + Chr7:20641835-20641854 MsG0780037146.01.T01:intron 25.0%
! TTGTTTGTCATCATCAAAAA+GGG - Chr7:20646982-20647001 None:intergenic 25.0%
! TTTACCATATTATCCATTCT+TGG - Chr7:20641851-20641870 None:intergenic 25.0%
!! AAGTTCATTCTCATCAATTT+TGG + Chr7:20644138-20644157 MsG0780037146.01.T01:intron 25.0%
!! AATAATTAACGAGTTGACTT+TGG + Chr7:20647030-20647049 MsG0780037146.01.T01:intron 25.0%
!! ACTTTAATTTCTGATCTCAA+TGG + Chr7:20640138-20640157 MsG0780037146.01.T01:CDS 25.0%
!! ATAATTAACGAGTTGACTTT+GGG + Chr7:20647031-20647050 MsG0780037146.01.T01:intron 25.0%
!! CCAATCTTTCTTTATCATTT+TGG - Chr7:20642308-20642327 None:intergenic 25.0%
!! TAATAAGGGTGTATCAAAAA+GGG - Chr7:20647274-20647293 None:intergenic 25.0%
!! TCTTTTTGCTAATGACAAAA+GGG - Chr7:20647381-20647400 None:intergenic 25.0%
!! TGACGAAAATTTTTATAGGA+AGG + Chr7:20644249-20644268 MsG0780037146.01.T01:intron 25.0%
!! TGTTATTTAAGAAGACCTTA+AGG + Chr7:20645442-20645461 MsG0780037146.01.T01:intron 25.0%
!! TTCTTTTTGCTAATGACAAA+AGG - Chr7:20647382-20647401 None:intergenic 25.0%
!!! AAATGAGTTTTCAGGTATAT+TGG + Chr7:20642894-20642913 MsG0780037146.01.T01:intron 25.0%
!!! AACGTTTTGTTAGTAAAAGA+GGG + Chr7:20645410-20645429 MsG0780037146.01.T01:intron 25.0%
!!! ATTCCATTTTTTTCCCAAAA+TGG - Chr7:20645258-20645277 None:intergenic 25.0%
!!! ATTTTGATACAGATACCAAA+TGG + Chr7:20643702-20643721 MsG0780037146.01.T01:three_prime_UTR 25.0%
!!! TAACGTTTTGTTAGTAAAAG+AGG + Chr7:20645409-20645428 MsG0780037146.01.T01:intron 25.0%
!!! TTATTGTGGTTTTACTAACA+TGG + Chr7:20641484-20641503 MsG0780037146.01.T01:intron 25.0%
!!! TTCTGTTTTGTGTTTGTTAA+GGG + Chr7:20641512-20641531 MsG0780037146.01.T01:intron 25.0%
!!! TTGTTTTAAAACTCTTTCCA+CGG - Chr7:20640214-20640233 None:intergenic 25.0%
!!! TTTCTGTTTTGTGTTTGTTA+AGG + Chr7:20641511-20641530 MsG0780037146.01.T01:intron 25.0%
!!! TTTGAAGCATTGAAAACTTA+TGG + Chr7:20640508-20640527 MsG0780037146.01.T01:intron 25.0%
!!! TTTTTCTTTTAACTAAGGGT+TGG + Chr7:20641731-20641750 MsG0780037146.01.T01:intron 25.0%
!!! TTTTTTGTTCTCTCTTATCT+AGG + Chr7:20645198-20645217 MsG0780037146.01.T01:intron 25.0%
AAAATCTTCGCAGTAAAGAA+GGG + Chr7:20640454-20640473 MsG0780037146.01.T01:intron 30.0%
AAAGAGAATATAGAGATGGA+TGG + Chr7:20644732-20644751 MsG0780037146.01.T01:intron 30.0%
AAAGGACATCAAAAGATTAG+TGG - Chr7:20646475-20646494 None:intergenic 30.0%
AACACTTGATATACAATCAG+AGG + Chr7:20645956-20645975 MsG0780037146.01.T01:intron 30.0%
AAGAAAACAACTCCAGAATA+CGG - Chr7:20646316-20646335 None:intergenic 30.0%
AATCACCAAAGTCTTAAGTT+TGG + Chr7:20644868-20644887 MsG0780037146.01.T01:intron 30.0%
AATTAACCTGGATAGAACTT+AGG - Chr7:20647148-20647167 None:intergenic 30.0%
ACAATTTGAAGAAAGGTTGA+AGG + Chr7:20640788-20640807 MsG0780037146.01.T01:CDS 30.0%
ACTAAATCAATTGCCTTATC+AGG - Chr7:20641547-20641566 None:intergenic 30.0%
ACTAGACAAAATCCACAATT+AGG - Chr7:20645147-20645166 None:intergenic 30.0%
AGAAAACTAGCAATAAGTTC+AGG + Chr7:20640081-20640100 MsG0780037146.01.T01:CDS 30.0%
AGAGAACAAAAAAAAGGAGA+GGG - Chr7:20645191-20645210 None:intergenic 30.0%
AGATGACGTTAATGATAAAG+GGG + Chr7:20644428-20644447 MsG0780037146.01.T01:intron 30.0%
AGCTATCTATGATGCTTATA+AGG + Chr7:20643559-20643578 MsG0780037146.01.T01:three_prime_UTR 30.0%
ATGAGCAAATAAAGAGCAAA+AGG - Chr7:20646813-20646832 None:intergenic 30.0%
ATGGAAAAGAGCTACAAATT+TGG + Chr7:20642688-20642707 MsG0780037146.01.T01:intron 30.0%
ATGTTCCTTAAAGAATAGAC+GGG + Chr7:20644947-20644966 MsG0780037146.01.T01:intron 30.0%
ATTAACCTGGATAGAACTTA+GGG - Chr7:20647147-20647166 None:intergenic 30.0%
ATTATCATGACTTCAAACCT+TGG + Chr7:20643096-20643115 MsG0780037146.01.T01:intron 30.0%
ATTATCCCGTCTATTCTTTA+AGG - Chr7:20644955-20644974 None:intergenic 30.0%
ATTGATGTATTGAATGTGGA+TGG + Chr7:20641459-20641478 MsG0780037146.01.T01:intron 30.0%
CAACAACACTTGATGAATAT+AGG + Chr7:20640967-20640986 MsG0780037146.01.T01:CDS 30.0%
CACTTAAAATTCCTCACAAA+AGG - Chr7:20645120-20645139 None:intergenic 30.0%
CATGGATAGAAATTCATCAA+AGG - Chr7:20646493-20646512 None:intergenic 30.0%
CTAACCAAGAATGGATAATA+TGG + Chr7:20641844-20641863 MsG0780037146.01.T01:intron 30.0%
GAAAGAGATGAGAAAAACAT+AGG + Chr7:20647412-20647431 MsG0780037146.01.T01:intron 30.0%
GACTAAAGAGAATATAGAGA+TGG + Chr7:20644728-20644747 MsG0780037146.01.T01:intron 30.0%
GATGAAATTCATCTTGTTCT+CGG + Chr7:20640861-20640880 MsG0780037146.01.T01:CDS 30.0%
GCTATCTATGATGCTTATAA+GGG + Chr7:20643560-20643579 MsG0780037146.01.T01:three_prime_UTR 30.0%
GGAATACATGGAAAAATTCT+CGG + Chr7:20642552-20642571 MsG0780037146.01.T01:intron 30.0%
GGATAAAATTAGACTTTGGA+AGG - Chr7:20644532-20644551 None:intergenic 30.0%
GGATTAAAAGAGAAATACGA+GGG + Chr7:20641083-20641102 MsG0780037146.01.T01:CDS 30.0%
GTGTGTTTAAGAAAATCTCA+AGG - Chr7:20644470-20644489 None:intergenic 30.0%
GTTGTGGTTGATTAATGAAA+AGG + Chr7:20644757-20644776 MsG0780037146.01.T01:intron 30.0%
TAATCCACGAAGAATACTAA+TGG - Chr7:20641069-20641088 None:intergenic 30.0%
TAGTATAGTCCTTGAATGTA+TGG + Chr7:20643833-20643852 MsG0780037146.01.T01:three_prime_UTR 30.0%
TCTTTCACACCTCTATATAA+AGG - Chr7:20646147-20646166 None:intergenic 30.0%
TGATGTTAGGTTATTTGCTT+TGG + Chr7:20640728-20640747 MsG0780037146.01.T01:intron 30.0%
TGGATTAAAAGAGAAATACG+AGG + Chr7:20641082-20641101 MsG0780037146.01.T01:CDS 30.0%
TGGTAAAGTAAAAAAGAGTG+TGG + Chr7:20641864-20641883 MsG0780037146.01.T01:intron 30.0%
TGTTTGTCATCATCAAAAAG+GGG - Chr7:20646981-20647000 None:intergenic 30.0%
TTGATTGTGTTCTTGAACAA+AGG - Chr7:20645861-20645880 None:intergenic 30.0%
TTGCAATTTCCATACATTCA+AGG - Chr7:20643845-20643864 None:intergenic 30.0%
TTTAAGTGATTGCCTAATTG+TGG + Chr7:20645132-20645151 MsG0780037146.01.T01:intron 30.0%
! AAATTTGTAGCTCTTTTCCA+TGG - Chr7:20642689-20642708 None:intergenic 30.0%
! AATAAGGGTGTATCAAAAAG+GGG - Chr7:20647273-20647292 None:intergenic 30.0%
! ACTTTTTGATGAAGTTGAGA+GGG + Chr7:20642974-20642993 MsG0780037146.01.T01:three_prime_UTR 30.0%
! AGGTTATTTGCTTTGGATAT+GGG + Chr7:20640735-20640754 MsG0780037146.01.T01:intron 30.0%
! ATTGTGGATTTTGTCTAGTT+TGG + Chr7:20645148-20645167 MsG0780037146.01.T01:intron 30.0%
! ATTTACCGGCATTTGAAATT+TGG + Chr7:20642758-20642777 MsG0780037146.01.T01:intron 30.0%
! CTAATAAGGGTGTATCAAAA+AGG - Chr7:20647275-20647294 None:intergenic 30.0%
! CTTATCTAGGTTACATTTTG+AGG + Chr7:20645211-20645230 MsG0780037146.01.T01:intron 30.0%
! CTTTTTGATACACCCTTATT+AGG + Chr7:20647273-20647292 MsG0780037146.01.T01:intron 30.0%
! GAAATTGCAAACATGCTTTT+TGG + Chr7:20643855-20643874 MsG0780037146.01.T01:three_prime_UTR 30.0%
! TAATTAACGAGTTGACTTTG+GGG + Chr7:20647032-20647051 MsG0780037146.01.T01:intron 30.0%
! TAGGTTATTTGCTTTGGATA+TGG + Chr7:20640734-20640753 MsG0780037146.01.T01:intron 30.0%
! TCATTCTCATCAATTTTGGA+GGG + Chr7:20644142-20644161 MsG0780037146.01.T01:intron 30.0%
! TGATTGTGAAATGAGTTTTC+AGG + Chr7:20642886-20642905 MsG0780037146.01.T01:intron 30.0%
! TTCATTCTCATCAATTTTGG+AGG + Chr7:20644141-20644160 MsG0780037146.01.T01:intron 30.0%
! TTTTGGACAGATTATCTGTT+TGG + Chr7:20644041-20644060 MsG0780037146.01.T01:three_prime_UTR 30.0%
! TTTTTACTTCCAGCATTACT+CGG - Chr7:20643179-20643198 None:intergenic 30.0%
!! ACGTTTTGTTAGTAAAAGAG+GGG + Chr7:20645411-20645430 MsG0780037146.01.T01:intron 30.0%
!! ATGCTTTTTGGTCTACAAAA+TGG + Chr7:20643867-20643886 MsG0780037146.01.T01:three_prime_UTR 30.0%
!! ATTGATTTTGGGAATTCTTG+AGG + Chr7:20640365-20640384 MsG0780037146.01.T01:CDS 30.0%
!! CAAAATGGATGTGTTTTTGT+TGG + Chr7:20643882-20643901 MsG0780037146.01.T01:three_prime_UTR 30.0%
!! CATTTAATTTGTTTGGTCCA+TGG + Chr7:20642669-20642688 MsG0780037146.01.T01:intron 30.0%
!! GAGAATAATGGATGTTACAA+AGG - Chr7:20641921-20641940 None:intergenic 30.0%
!! GAGTATTGATGTATTGAATG+TGG + Chr7:20641455-20641474 MsG0780037146.01.T01:intron 30.0%
!! GATTATATAAGAGCACTTAC+AGG - Chr7:20643388-20643407 None:intergenic 30.0%
!! GCAATTGATCGATTGATTTT+GGG + Chr7:20640354-20640373 MsG0780037146.01.T01:CDS 30.0%
!! TACTTTTTGATGAAGTTGAG+AGG + Chr7:20642973-20642992 MsG0780037146.01.T01:three_prime_UTR 30.0%
!! TCAAAAAGTACTAGACTGTA+AGG - Chr7:20642963-20642982 None:intergenic 30.0%
!! TGGAAGTAAAAAAGCATTTC+AGG + Chr7:20643187-20643206 MsG0780037146.01.T01:intron 30.0%
!! TTGTGGATTTTGTCTAGTTT+GGG + Chr7:20645149-20645168 MsG0780037146.01.T01:intron 30.0%
!!! ATCTTGTTTCTGTTCTCTTT+TGG + Chr7:20644613-20644632 MsG0780037146.01.T01:intron 30.0%
!!! CTGTTTGGTTTTTGTTCATT+CGG + Chr7:20644056-20644075 MsG0780037146.01.T01:three_prime_UTR 30.0%
!!! GTTTTGTTTGTAAACTTTCG+TGG - Chr7:20640039-20640058 None:intergenic 30.0%
AAAAGGATGCTGCATTTGAA+AGG + Chr7:20641000-20641019 MsG0780037146.01.T01:CDS 35.0%
AAATACTCTAACCTCCCTTA+AGG - Chr7:20645460-20645479 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG + Chr7:20645542-20645561 MsG0780037146.01.T01:intron 35.0%
AATACAATATCTTACCCTGG+TGG - Chr7:20642598-20642617 None:intergenic 35.0%
AATGGTTAGACTTGACATGT+CGG + Chr7:20642531-20642550 MsG0780037146.01.T01:intron 35.0%
ACAGAAGTTAAAAGGAATGG+AGG + Chr7:20641433-20641452 MsG0780037146.01.T01:intron 35.0%
ACCAAAGTCTTAAGTTTGGT+TGG + Chr7:20644872-20644891 MsG0780037146.01.T01:intron 35.0%
ACGACACAAAGCAATTATAC+TGG + Chr7:20645698-20645717 MsG0780037146.01.T01:intron 35.0%
AGATTAGTGGAATTTCGCAA+CGG - Chr7:20646462-20646481 None:intergenic 35.0%
AGGAAATTGACAACCTTGAA+AGG + Chr7:20641613-20641632 MsG0780037146.01.T01:intron 35.0%
AGGTCATTCTCTCAAAAACT+TGG - Chr7:20643805-20643824 None:intergenic 35.0%
AGGTGAGAAAAACACAAGAA+GGG + Chr7:20645543-20645562 MsG0780037146.01.T01:intron 35.0%
AGTATAGCAAAGAGAAAGAG+AGG + Chr7:20642022-20642041 MsG0780037146.01.T01:CDS 35.0%
AGTTGCATTCTTTCCTTTCA+AGG - Chr7:20641629-20641648 None:intergenic 35.0%
ATACCAAATGGACCAAAAAC+TGG + Chr7:20643714-20643733 MsG0780037146.01.T01:three_prime_UTR 35.0%
ATAGGGGACAATTTGAAGAA+AGG + Chr7:20640781-20640800 MsG0780037146.01.T01:CDS 35.0%
ATGTTCCTTTGGATAAGGAA+TGG - Chr7:20646279-20646298 None:intergenic 35.0%
ATTTAAGAAGACCTTAAGGG+AGG + Chr7:20645446-20645465 MsG0780037146.01.T01:intron 35.0%
ATTTGAAAGGAGGTTTCAAC+AGG + Chr7:20641013-20641032 MsG0780037146.01.T01:CDS 35.0%
CAAAGATGTTCCTTTGGATA+AGG - Chr7:20646284-20646303 None:intergenic 35.0%
CAAATCAGGCAAAAGATCAT+TGG - Chr7:20646225-20646244 None:intergenic 35.0%
CACTGGATTTGAGAAATTCA+AGG - Chr7:20646532-20646551 None:intergenic 35.0%
CAGAAATTAAAGTGGATGCA+AGG - Chr7:20640131-20640150 None:intergenic 35.0%
CGAAGAATACTAATGGTATC+AGG - Chr7:20641062-20641081 None:intergenic 35.0%
CGACGTTTGATTCTATTTGT+TGG - Chr7:20644694-20644713 None:intergenic 35.0%
GAAAACTTATGGTAGAGACT+TGG + Chr7:20640519-20640538 MsG0780037146.01.T01:intron 35.0%
GAAAATCTTCGCAGTAAAGA+AGG + Chr7:20640453-20640472 MsG0780037146.01.T01:intron 35.0%
GAAAATGGATATGAGGTCAT+TGG + Chr7:20643742-20643761 MsG0780037146.01.T01:three_prime_UTR 35.0%
GAAATCCATTCCTTATCCAA+AGG + Chr7:20646271-20646290 MsG0780037146.01.T01:intron 35.0%
GAGAGAACAAAAAAAAGGAG+AGG - Chr7:20645192-20645211 None:intergenic 35.0%
GATACCATTAGTATTCTTCG+TGG + Chr7:20641062-20641081 MsG0780037146.01.T01:CDS 35.0%
GCAAGTATATAATCTAGTGC+TGG - Chr7:20643352-20643371 None:intergenic 35.0%
GGAAGGATGTTTATGACATT+TGG + Chr7:20644266-20644285 MsG0780037146.01.T01:intron 35.0%
GTAAAACAGCTGTTGTTGAA+GGG + Chr7:20640662-20640681 MsG0780037146.01.T01:CDS 35.0%
GTCTTCACTCCTTTATATAG+AGG + Chr7:20646135-20646154 MsG0780037146.01.T01:intron 35.0%
GTTTGTCATCATCAAAAAGG+GGG - Chr7:20646980-20646999 None:intergenic 35.0%
TAAAATCCACAGTTCTTCCT+TGG - Chr7:20643065-20643084 None:intergenic 35.0%
TACTCTTAGTGAAATCTCCT+TGG - Chr7:20645766-20645785 None:intergenic 35.0%
TATACCAAATCACTTCCCTT+TGG - Chr7:20643627-20643646 None:intergenic 35.0%
TCACAAAAGGCTCTCTATAA+AGG - Chr7:20645107-20645126 None:intergenic 35.0%
TCCAACCAAACTTAAGACTT+TGG - Chr7:20644876-20644895 None:intergenic 35.0%
TTAACCTGGATAGAACTTAG+GGG - Chr7:20647146-20647165 None:intergenic 35.0%
TTCCAAGCAATTTCCAATGT+CGG + Chr7:20640168-20640187 MsG0780037146.01.T01:CDS 35.0%
TTCTCGGTATCAAGATTGAT+TGG + Chr7:20642568-20642587 MsG0780037146.01.T01:intron 35.0%
TTGAAAGGAAAGAATGCAAC+TGG + Chr7:20641628-20641647 MsG0780037146.01.T01:intron 35.0%
TTGCTATACTTCATCTTCAG+AGG - Chr7:20642012-20642031 None:intergenic 35.0%
TTGGCTAAGAGAATAGTTAG+AGG + Chr7:20640685-20640704 MsG0780037146.01.T01:intron 35.0%
! AAAGAAAGATTGGTTGGACT+TGG + Chr7:20642315-20642334 MsG0780037146.01.T01:CDS 35.0%
! AAGGAAGAACTGTGGATTTT+AGG + Chr7:20643064-20643083 MsG0780037146.01.T01:intron 35.0%
! AAGGCATGTGTTTGCAATTT+TGG - Chr7:20646421-20646440 None:intergenic 35.0%
! ACTATGTTTTATCGTTGTGC+AGG + Chr7:20643485-20643504 MsG0780037146.01.T01:intron 35.0%
! ATAAGGGTGTATCAAAAAGG+GGG - Chr7:20647272-20647291 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATT+TGG + Chr7:20646223-20646242 MsG0780037146.01.T01:intron 35.0%
! CATTTTCACCAACCAGTTTT+TGG - Chr7:20643729-20643748 None:intergenic 35.0%
! CTAGTTATTGATGACATTGC+AGG + Chr7:20641948-20641967 MsG0780037146.01.T01:intron 35.0%
! TCTTTTGGCATAGTTGAATG+AGG + Chr7:20644628-20644647 MsG0780037146.01.T01:intron 35.0%
! TGATCAGTGTGTTCAGTTTT+AGG - Chr7:20645602-20645621 None:intergenic 35.0%
! TTGTGAGGATTTTGTCAAGA+AGG + Chr7:20640599-20640618 MsG0780037146.01.T01:CDS 35.0%
! TTTATAGAGAGCCTTTTGTG+AGG + Chr7:20645106-20645125 MsG0780037146.01.T01:intron 35.0%
! TTTTCTTCTCGGTTCAAAGA+AGG + Chr7:20644222-20644241 MsG0780037146.01.T01:intron 35.0%
!! CAAAAACTGGTTGGTGAAAA+TGG + Chr7:20643727-20643746 MsG0780037146.01.T01:three_prime_UTR 35.0%
!! CCTCCATTTTGGGAAAAAAA+TGG + Chr7:20645252-20645271 MsG0780037146.01.T01:intron 35.0%
!! CGTTTTGTTAGTAAAAGAGG+GGG + Chr7:20645412-20645431 MsG0780037146.01.T01:intron 35.0%
!! GGCAATTGATCGATTGATTT+TGG + Chr7:20640353-20640372 MsG0780037146.01.T01:CDS 35.0%
!! GTCATTTCAAAGGTGTTTGA+AGG - Chr7:20646440-20646459 None:intergenic 35.0%
!! GTTTTTGAGAGAATGACCTT+AGG + Chr7:20643806-20643825 MsG0780037146.01.T01:three_prime_UTR 35.0%
!! TGCTTCTAGGGTTAAATTAG+AGG + Chr7:20640428-20640447 MsG0780037146.01.T01:CDS 35.0%
!! TGTGGATTTTGTCTAGTTTG+GGG + Chr7:20645150-20645169 MsG0780037146.01.T01:intron 35.0%
!! TTGATAATGGAAGAGCTTTC+TGG - Chr7:20640282-20640301 None:intergenic 35.0%
!!! CCATTTTTTTCCCAAAATGG+AGG - Chr7:20645255-20645274 None:intergenic 35.0%
!!! GAATGTGGATGGTTTTATTG+TGG + Chr7:20641470-20641489 MsG0780037146.01.T01:intron 35.0%
AAAGAAGTGGAAGATGCTGA+AGG + Chr7:20640819-20640838 MsG0780037146.01.T01:CDS 40.0%
AACGTGCGATATGAAAGCAA+TGG + Chr7:20641800-20641819 MsG0780037146.01.T01:intron 40.0%
AAGAAGTGGAAGATGCTGAA+GGG + Chr7:20640820-20640839 MsG0780037146.01.T01:CDS 40.0%
AAGTCCACTTATGAGATGCT+CGG - Chr7:20643124-20643143 None:intergenic 40.0%
ACAACCTCAGCTATTTGATC+TGG - Chr7:20642249-20642268 None:intergenic 40.0%
ACGATATGGTGCAATTGAAG+AGG + Chr7:20642143-20642162 MsG0780037146.01.T01:CDS 40.0%
ACGTGATGAGGAGATAAGAA+GGG + Chr7:20640576-20640595 MsG0780037146.01.T01:CDS 40.0%
ACTTGACATGTCGGAATACA+TGG + Chr7:20642540-20642559 MsG0780037146.01.T01:intron 40.0%
AGAGAAAGAGAGGATTGATG+AGG + Chr7:20642032-20642051 MsG0780037146.01.T01:CDS 40.0%
AGCAATTGATGAAGGTTGCA+AGG + Chr7:20643265-20643284 MsG0780037146.01.T01:intron 40.0%
AGGACTATACTAACAGCCTA+AGG - Chr7:20643825-20643844 None:intergenic 40.0%
AGGTATATTGGACATGACGA+AGG + Chr7:20642906-20642925 MsG0780037146.01.T01:intron 40.0%
ATATGGTGCAATTGAAGAGG+TGG + Chr7:20642146-20642165 MsG0780037146.01.T01:CDS 40.0%
ATCAAAAAGGGGGAGATTGT+TGG - Chr7:20646970-20646989 None:intergenic 40.0%
ATCAATTGCTCGTGAGATAG+AGG - Chr7:20643255-20643274 None:intergenic 40.0%
ATCCAAAGGAACATCTTTGC+AGG + Chr7:20646285-20646304 MsG0780037146.01.T01:intron 40.0%
ATCTCACGAGCAATTGATGA+AGG + Chr7:20643257-20643276 MsG0780037146.01.T01:intron 40.0%
ATCTTCAGCTTCTGGTGAAA+TGG + Chr7:20646552-20646571 MsG0780037146.01.T01:intron 40.0%
ATGTCTAGTCGGTACATAAC+TGG + Chr7:20641155-20641174 MsG0780037146.01.T01:CDS 40.0%
CAAAAGGCTCTCTATAAAGG+AGG - Chr7:20645104-20645123 None:intergenic 40.0%
CAAATGGACCAAAAACTGGT+TGG + Chr7:20643718-20643737 MsG0780037146.01.T01:three_prime_UTR 40.0%
CATAGGACAACAACCAAATC+AGG - Chr7:20646239-20646258 None:intergenic 40.0%
CCTAACATCAGCAAGATTCT+AGG - Chr7:20640718-20640737 None:intergenic 40.0%
CCTAGAATCTTGCTGATGTT+AGG + Chr7:20640715-20640734 MsG0780037146.01.T01:intron 40.0%
CTGCTTCAAGTCTTAGATGA+CGG + Chr7:20643020-20643039 MsG0780037146.01.T01:three_prime_UTR 40.0%
CTTAAAGGCTATCAGACTCA+GGG - Chr7:20647106-20647125 None:intergenic 40.0%
CTTCAATTGCACCATATCGT+AGG - Chr7:20642143-20642162 None:intergenic 40.0%
GGGAAACTTGATCCTGTTAT+TGG + Chr7:20640553-20640572 MsG0780037146.01.T01:intron 40.0%
GGTAAAACAGCTGTTGTTGA+AGG + Chr7:20640661-20640680 MsG0780037146.01.T01:CDS 40.0%
GGTGAGAAAAACACAAGAAG+GGG + Chr7:20645544-20645563 MsG0780037146.01.T01:intron 40.0%
GTATACCGTGTGGAAAAGAA+TGG + Chr7:20643642-20643661 MsG0780037146.01.T01:three_prime_UTR 40.0%
GTGAGAAAAACACAAGAAGG+GGG + Chr7:20645545-20645564 MsG0780037146.01.T01:intron 40.0%
TAAACGAGTCACTGGTATAC+CGG - Chr7:20642283-20642302 None:intergenic 40.0%
TAAAGTGGATGCAAGGTGTA+CGG - Chr7:20640124-20640143 None:intergenic 40.0%
TAACCTGGATAGAACTTAGG+GGG - Chr7:20647145-20647164 None:intergenic 40.0%
TAATCAGAATCTGAACGCAG+CGG + Chr7:20645651-20645670 MsG0780037146.01.T01:intron 40.0%
TATATTGGACATGACGAAGG+TGG + Chr7:20642909-20642928 MsG0780037146.01.T01:three_prime_UTR 40.0%
TCAAGGTTGTCAATTTCCTC+TGG - Chr7:20641612-20641631 None:intergenic 40.0%
TCAGGCCAGAATTGTTGAAT+AGG + Chr7:20643205-20643224 MsG0780037146.01.T01:intron 40.0%
TCCAGCCTATTCAACAATTC+TGG - Chr7:20643213-20643232 None:intergenic 40.0%
TGACGAAGGTGGACAATTAA+CGG + Chr7:20642920-20642939 MsG0780037146.01.T01:three_prime_UTR 40.0%
TGCTTCAAGTCTTAGATGAC+GGG + Chr7:20643021-20643040 MsG0780037146.01.T01:three_prime_UTR 40.0%
TTAAAGGCTATCAGACTCAG+GGG - Chr7:20647105-20647124 None:intergenic 40.0%
TTATCGTTGTGCAGGTGTAT+GGG + Chr7:20643493-20643512 MsG0780037146.01.T01:intron 40.0%
TTCTCAAGCCACCTTCTAAT+TGG - Chr7:20643525-20643544 None:intergenic 40.0%
TTGATGCTGACGGAAATTGT+TGG + Chr7:20642222-20642241 MsG0780037146.01.T01:CDS 40.0%
TTTATCGTTGTGCAGGTGTA+TGG + Chr7:20643492-20643511 MsG0780037146.01.T01:intron 40.0%
TTTCGCAACGGTCATTTCAA+AGG - Chr7:20646450-20646469 None:intergenic 40.0%
TTTGTTAGTAAAAGAGGGGG+AGG + Chr7:20645415-20645434 MsG0780037146.01.T01:intron 40.0%
! AAACCATTGTGCTGACAGAA+TGG + Chr7:20645031-20645050 MsG0780037146.01.T01:intron 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG - Chr7:20645755-20645774 None:intergenic 40.0%
! AAGTTCTGTTTTACCGACAC+CGG - Chr7:20642471-20642490 None:intergenic 40.0%
! AATCTTGAAGGTAGCACTGA+TGG + Chr7:20642183-20642202 MsG0780037146.01.T01:CDS 40.0%
! ACAAAACAGAGTAGTGGAGA+AGG + Chr7:20646352-20646371 MsG0780037146.01.T01:intron 40.0%
! ACAACTGTATGCATTGATGC+TGG + Chr7:20643600-20643619 MsG0780037146.01.T01:three_prime_UTR 40.0%
! CAAAGTCATTGAAAGAGCAC+AGG + Chr7:20640299-20640318 MsG0780037146.01.T01:CDS 40.0%
! CATCTCATAAGTGGACTTTC+AGG + Chr7:20643126-20643145 MsG0780037146.01.T01:intron 40.0%
! CTTTGCTACTCCTCCATTTT+GGG + Chr7:20645242-20645261 MsG0780037146.01.T01:intron 40.0%
! GGCAATTGATTTAGTTGACG+AGG + Chr7:20641552-20641571 MsG0780037146.01.T01:CDS 40.0%
! TCTTTGCTACTCCTCCATTT+TGG + Chr7:20645241-20645260 MsG0780037146.01.T01:intron 40.0%
! TGTTTTCTTGTCTTGTAGCG+TGG + Chr7:20646327-20646346 MsG0780037146.01.T01:intron 40.0%
!! AAGTGATTTGGTATACCGTG+TGG + Chr7:20643632-20643651 MsG0780037146.01.T01:three_prime_UTR 40.0%
!! ACTTCATGCTTTGGAGAAAG+AGG + Chr7:20641658-20641677 MsG0780037146.01.T01:intron 40.0%
!! ATCTTGAAGGTAGCACTGAT+GGG + Chr7:20642184-20642203 MsG0780037146.01.T01:CDS 40.0%
!! ATGAGGTTGTTTTCTCGCAA+TGG + Chr7:20644645-20644664 MsG0780037146.01.T01:intron 40.0%
!! CGGTAAAACAGAACTTGCTA+AGG + Chr7:20642475-20642494 MsG0780037146.01.T01:intron 40.0%
!! GGTTGGTGAAAATGGATATG+AGG + Chr7:20643735-20643754 MsG0780037146.01.T01:three_prime_UTR 40.0%
!!! CAACCAGTTTTTGGTCCATT+TGG - Chr7:20643720-20643739 None:intergenic 40.0%
!!! GAAGGCAGTTTTGAAAGAAG+TGG + Chr7:20640806-20640825 MsG0780037146.01.T01:CDS 40.0%
AAAGTGGATGCAAGGTGTAC+GGG - Chr7:20640123-20640142 None:intergenic 45.0%
AACAGCTGTTGTTGAAGGGT+TGG + Chr7:20640666-20640685 MsG0780037146.01.T01:intron 45.0%
AAGCAGTTAAAGCTGTCGCT+GGG + Chr7:20642372-20642391 MsG0780037146.01.T01:CDS 45.0%
AAGGAACCAGTTGGTTGTTG+TGG - Chr7:20642431-20642450 None:intergenic 45.0%
AAGGTGGCTTGAGAAGAATG+TGG + Chr7:20643530-20643549 MsG0780037146.01.T01:three_prime_UTR 45.0%
ACCGTGTGGAAAAGAATGGA+GGG + Chr7:20643646-20643665 MsG0780037146.01.T01:three_prime_UTR 45.0%
ACTGTAAGGCCTTCTCCTTA+CGG - Chr7:20642949-20642968 None:intergenic 45.0%
AGGAATAGGAAGGAACCAGT+TGG - Chr7:20642440-20642459 None:intergenic 45.0%
AGGAGATAAGAAGGGTTGTG+AGG + Chr7:20640584-20640603 MsG0780037146.01.T01:CDS 45.0%
AGGATGCTGCATTTGAAAGG+AGG + Chr7:20641003-20641022 MsG0780037146.01.T01:CDS 45.0%
AGGTCATTGGCGATGATGAA+TGG + Chr7:20643755-20643774 MsG0780037146.01.T01:three_prime_UTR 45.0%
AGGTGAGAACTTGATGCTGA+CGG + Chr7:20642212-20642231 MsG0780037146.01.T01:CDS 45.0%
AGTCGCTGGTACTCAGTATA+GGG + Chr7:20640764-20640783 MsG0780037146.01.T01:CDS 45.0%
ATAGAGATGGATGGACGTTG+TGG + Chr7:20644741-20644760 MsG0780037146.01.T01:intron 45.0%
ATCCAGTGATCTTCAGCTTC+TGG + Chr7:20646544-20646563 MsG0780037146.01.T01:intron 45.0%
ATGGGGCTAGACCAATTAGA+AGG + Chr7:20643511-20643530 MsG0780037146.01.T01:three_prime_UTR 45.0%
ATTATAGGTGAGCCAGGTGT+TGG + Chr7:20640640-20640659 MsG0780037146.01.T01:CDS 45.0%
CAAGCAATTTCCAATGTCGG+TGG + Chr7:20640171-20640190 MsG0780037146.01.T01:CDS 45.0%
CACCGACATTGGAAATTGCT+TGG - Chr7:20640173-20640192 None:intergenic 45.0%
CACTTTACTCTCTTCAGGAG+CGG + Chr7:20646713-20646732 MsG0780037146.01.T01:intron 45.0%
CAGATTGCACAGTAGAGTTG+TGG + Chr7:20642341-20642360 MsG0780037146.01.T01:CDS 45.0%
CCTGAGTCTGATAGCCTTTA+AGG + Chr7:20647104-20647123 MsG0780037146.01.T01:intron 45.0%
CCTGGCTCACCTATAATAAC+AGG - Chr7:20640637-20640656 None:intergenic 45.0%
CCTGTTATTATAGGTGAGCC+AGG + Chr7:20640634-20640653 MsG0780037146.01.T01:CDS 45.0%
CCTTAAAGGCTATCAGACTC+AGG - Chr7:20647107-20647126 None:intergenic 45.0%
CGTGGACAACTTAGATGCAT+CGG + Chr7:20640942-20640961 MsG0780037146.01.T01:CDS 45.0%
CTAATGGTATCAGGCACACT+AGG - Chr7:20641053-20641072 None:intergenic 45.0%
CTTGCTGAGAGAGGAATCAT+TGG + Chr7:20643315-20643334 MsG0780037146.01.T01:intron 45.0%
CTTGTTGACAGAATCTGGTG+TGG + Chr7:20640404-20640423 MsG0780037146.01.T01:CDS 45.0%
GACAATTAACGGAAGCCGTA+AGG + Chr7:20642931-20642950 MsG0780037146.01.T01:three_prime_UTR 45.0%
GACGTGATGAGGAGATAAGA+AGG + Chr7:20640575-20640594 MsG0780037146.01.T01:CDS 45.0%
GAGAAATACGAGGGTCATCA+TGG + Chr7:20641092-20641111 MsG0780037146.01.T01:CDS 45.0%
GAGCTGCAACAACAATTGCA+CGG - Chr7:20641133-20641152 None:intergenic 45.0%
GCCAGAATTGTTGAATAGGC+TGG + Chr7:20643209-20643228 MsG0780037146.01.T01:intron 45.0%
GCTTGCAAACCTCACCTTAA+AGG - Chr7:20647121-20647140 None:intergenic 45.0%
GGAAAGAATGCAACTGGAAG+TGG + Chr7:20641634-20641653 MsG0780037146.01.T01:intron 45.0%
GGAAGTGGAACTTCATGCTT+TGG + Chr7:20641649-20641668 MsG0780037146.01.T01:intron 45.0%
GGATTCAAGAGCTTGTGTCA+TGG - Chr7:20646511-20646530 None:intergenic 45.0%
GGGATTGTTGATGCTGAAAC+TGG + Chr7:20643666-20643685 MsG0780037146.01.T01:three_prime_UTR 45.0%
GGTATACCAGTGACTCGTTT+AGG + Chr7:20642282-20642301 MsG0780037146.01.T01:CDS 45.0%
GGTTGCAAGGTTGCAAATGA+AGG + Chr7:20643278-20643297 MsG0780037146.01.T01:intron 45.0%
GTGGACACAAAACAGAGTAG+TGG + Chr7:20646346-20646365 MsG0780037146.01.T01:intron 45.0%
GTTTGTAAGCTCAGAGTCTG+AGG + Chr7:20647062-20647081 MsG0780037146.01.T01:intron 45.0%
TAAAGGCTATCAGACTCAGG+GGG - Chr7:20647104-20647123 None:intergenic 45.0%
TACCGTGTGGAAAAGAATGG+AGG + Chr7:20643645-20643664 MsG0780037146.01.T01:three_prime_UTR 45.0%
TAGTCGCTGGTACTCAGTAT+AGG + Chr7:20640763-20640782 MsG0780037146.01.T01:CDS 45.0%
TATCGTTGTGCAGGTGTATG+GGG + Chr7:20643494-20643513 MsG0780037146.01.T01:intron 45.0%
TCCTCATCACGTCCAATAAC+AGG - Chr7:20640568-20640587 None:intergenic 45.0%
TCCTGTTATTGGACGTGATG+AGG + Chr7:20640564-20640583 MsG0780037146.01.T01:CDS 45.0%
TGCAAAGTGTGCTTGAGCAA+AGG - Chr7:20645830-20645849 None:intergenic 45.0%
TGGACCAGATCAAATAGCTG+AGG + Chr7:20642242-20642261 MsG0780037146.01.T01:CDS 45.0%
TGGTCCAAAGGGAAGTGATT+TGG + Chr7:20643620-20643639 MsG0780037146.01.T01:three_prime_UTR 45.0%
TGGTCGATGTCAAGGATCAA+TGG + Chr7:20640887-20640906 MsG0780037146.01.T01:CDS 45.0%
TGGTGAAATGGCTTCTGATG+AGG + Chr7:20646564-20646583 MsG0780037146.01.T01:intron 45.0%
TTAGTGCTCCTGAAGACAAG+AGG - Chr7:20646666-20646685 None:intergenic 45.0%
TTCAAACCTATGCTTGCTCG+TGG + Chr7:20640924-20640943 MsG0780037146.01.T01:CDS 45.0%
TTCCTATTCCTTGGTCCAAC+CGG + Chr7:20642449-20642468 MsG0780037146.01.T01:intron 45.0%
TTGCAGCTCAGATGTCTAGT+CGG + Chr7:20641144-20641163 MsG0780037146.01.T01:CDS 45.0%
! AAACAGAGTAGTGGAGAAGG+TGG + Chr7:20646355-20646374 MsG0780037146.01.T01:intron 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG - Chr7:20645754-20645773 None:intergenic 45.0%
! ACTGGTTCCTTCCTATTCCT+TGG + Chr7:20642440-20642459 MsG0780037146.01.T01:intron 45.0%
! AGAGACTTGGTTGAACAAGC+AGG + Chr7:20640532-20640551 MsG0780037146.01.T01:intron 45.0%
! AGAGAGTAAAGTGCTCCTGA+CGG - Chr7:20646706-20646725 None:intergenic 45.0%
! ATGCATTGATGCTGGTCCAA+AGG + Chr7:20643608-20643627 MsG0780037146.01.T01:three_prime_UTR 45.0%
! ATTCATCTTGTTCTCGGTGC+TGG + Chr7:20640867-20640886 MsG0780037146.01.T01:CDS 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG - Chr7:20645756-20645775 None:intergenic 45.0%
! GAGACTTGGTTGAACAAGCA+GGG + Chr7:20640533-20640552 MsG0780037146.01.T01:intron 45.0%
! TCCCTCCATTCTTTTCCACA+CGG - Chr7:20643650-20643669 None:intergenic 45.0%
! TGCATTGATGCTGGTCCAAA+GGG + Chr7:20643609-20643628 MsG0780037146.01.T01:three_prime_UTR 45.0%
! TTTTGGCCTAAACGAGTCAC+TGG - Chr7:20642291-20642310 None:intergenic 45.0%
!! ACAGCTGTTTTACCAACACC+TGG - Chr7:20640655-20640674 None:intergenic 45.0%
!! AGGAGCACTTTACTCTCTTC+AGG + Chr7:20646708-20646727 MsG0780037146.01.T01:intron 45.0%
!! CTTCAGGAGCACTAATCTTC+AGG + Chr7:20646671-20646690 MsG0780037146.01.T01:intron 45.0%
!! GCAGACTTGTTGACAGAATC+TGG + Chr7:20640399-20640418 MsG0780037146.01.T01:CDS 45.0%
!! GGATTTTGTCTAGTTTGGGG+AGG + Chr7:20645153-20645172 MsG0780037146.01.T01:intron 45.0%
!! GTCTGATAGCCTTTAAGGTG+AGG + Chr7:20647109-20647128 MsG0780037146.01.T01:intron 45.0%
!! TACTGGTTCCTTCCACAATC+CGG + Chr7:20645715-20645734 MsG0780037146.01.T01:intron 45.0%
!! TCAGGAGGCTTTTTCTCTTC+AGG + Chr7:20646743-20646762 MsG0780037146.01.T01:intron 45.0%
!! TCATGCTTTGGAGAAAGAGG+AGG + Chr7:20641661-20641680 MsG0780037146.01.T01:intron 45.0%
!! TGTCTAGTTTGGGGAGGTTT+TGG + Chr7:20645159-20645178 MsG0780037146.01.T01:intron 45.0%
!!! AAATTTTCAAATATTATTAA+TGG + Chr7:20647322-20647341 MsG0780037146.01.T01:intron 5.0%
!!! AATTAATTTTATTTGAAATT+TGG + Chr7:20647242-20647261 MsG0780037146.01.T01:intron 5.0%
!!! AATTTTCAAATATTATTAAT+GGG + Chr7:20647323-20647342 MsG0780037146.01.T01:intron 5.0%
AACAAACCCGTGCTAAGCAC+GGG + Chr7:20644306-20644325 MsG0780037146.01.T01:intron 50.0%
AATCTGGTGTGGCTGCTTCT+AGG + Chr7:20640415-20640434 MsG0780037146.01.T01:CDS 50.0%
ACGGGAGTGAGATTAACCGA+TGG + Chr7:20643039-20643058 MsG0780037146.01.T01:intron 50.0%
ACTGGACTACTTCCGGATTG+TGG - Chr7:20645730-20645749 None:intergenic 50.0%
AGAGCTCCTCTTTGCACTAC+AGG + Chr7:20642080-20642099 MsG0780037146.01.T01:CDS 50.0%
AGAGCTGCAGACCTACGATA+TGG + Chr7:20642129-20642148 MsG0780037146.01.T01:CDS 50.0%
AGATTCGTCACCACCGACAT+TGG - Chr7:20640184-20640203 None:intergenic 50.0%
AGATTGATTGGTGCACCACC+AGG + Chr7:20642580-20642599 MsG0780037146.01.T01:intron 50.0%
AGCAGTTAAAGCTGTCGCTG+GGG + Chr7:20642373-20642392 MsG0780037146.01.T01:CDS 50.0%
AGTGGAAGATGCTGAAGGGA+AGG + Chr7:20640824-20640843 MsG0780037146.01.T01:CDS 50.0%
AGTTGTCCACGAGCAAGCAT+AGG - Chr7:20640933-20640952 None:intergenic 50.0%
ATATCGTAGGTCTGCAGCTC+TGG - Chr7:20642130-20642149 None:intergenic 50.0%
ATCTGGTGTGGCTGCTTCTA+GGG + Chr7:20640416-20640435 MsG0780037146.01.T01:CDS 50.0%
CAACAAACCCGTGCTAAGCA+CGG + Chr7:20644305-20644324 MsG0780037146.01.T01:intron 50.0%
CAAGCAGTTAAAGCTGTCGC+TGG + Chr7:20642371-20642390 MsG0780037146.01.T01:CDS 50.0%
CACAGTTCTTCCTTGGCCAT+CGG - Chr7:20643058-20643077 None:intergenic 50.0%
CACCAGAAGCTGAAGATCAC+TGG - Chr7:20646549-20646568 None:intergenic 50.0%
CGCCTGCAAAGATGTTCCTT+TGG - Chr7:20646290-20646309 None:intergenic 50.0%
CTTCTGGACCTCTTGTCTTC+AGG + Chr7:20646655-20646674 MsG0780037146.01.T01:intron 50.0%
CTTGCAGTTGTGCTTGAGCA+GGG - Chr7:20645891-20645910 None:intergenic 50.0%
GACTACTTCCGGATTGTGGA+AGG - Chr7:20645726-20645745 None:intergenic 50.0%
GAGCAAAGGAAGTCTCTTGC+AGG - Chr7:20645816-20645835 None:intergenic 50.0%
GATTGATTGGTGCACCACCA+GGG + Chr7:20642581-20642600 MsG0780037146.01.T01:intron 50.0%
GCTGACAGAATGGCGCTATA+GGG + Chr7:20645041-20645060 MsG0780037146.01.T01:intron 50.0%
GGAAGACCACAACAACCAAC+TGG + Chr7:20642422-20642441 MsG0780037146.01.T01:intron 50.0%
GGGCTAGACCAATTAGAAGG+TGG + Chr7:20643514-20643533 MsG0780037146.01.T01:three_prime_UTR 50.0%
GGTTGGACCAAGGAATAGGA+AGG - Chr7:20642450-20642469 None:intergenic 50.0%
GTCGCTGGTACTCAGTATAG+GGG + Chr7:20640765-20640784 MsG0780037146.01.T01:CDS 50.0%
GTGAGATTAACCGATGGCCA+AGG + Chr7:20643045-20643064 MsG0780037146.01.T01:intron 50.0%
TAACGGAAGCCGTAAGGAGA+AGG + Chr7:20642937-20642956 MsG0780037146.01.T01:three_prime_UTR 50.0%
TAGCTGAGGTTGTAAGCCGA+TGG + Chr7:20642256-20642275 MsG0780037146.01.T01:CDS 50.0%
TCAACTTGACAGTCAGCCAG+AGG + Chr7:20641593-20641612 MsG0780037146.01.T01:intron 50.0%
TCACTGGTATACCGGTCCAT+CGG - Chr7:20642275-20642294 None:intergenic 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG - Chr7:20645892-20645911 None:intergenic 50.0%
TGAAGCTTAGACGCTCCTGA+AGG - Chr7:20646778-20646797 None:intergenic 50.0%
TGCTGACAGAATGGCGCTAT+AGG + Chr7:20645040-20645059 MsG0780037146.01.T01:intron 50.0%
TTATGAGATGCTCGGCACCA+AGG - Chr7:20643116-20643135 None:intergenic 50.0%
TTCAGGAGCAAGTTGCCTTC+AGG + Chr7:20646760-20646779 MsG0780037146.01.T01:intron 50.0%
TTCAGGAGCGGCTTTACTTC+AGG + Chr7:20646725-20646744 MsG0780037146.01.T01:intron 50.0%
! ACGGGTTGTACGTCGAAGTA+GGG + Chr7:20644341-20644360 MsG0780037146.01.T01:intron 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG - Chr7:20645753-20645772 None:intergenic 50.0%
! CAGCGACAGCTTTAACTGCT+TGG - Chr7:20642373-20642392 None:intergenic 50.0%
! CTTTCTGGTACATGCTGTGG+TGG - Chr7:20640267-20640286 None:intergenic 50.0%
! GAGCTTTCTGGTACATGCTG+TGG - Chr7:20640270-20640289 None:intergenic 50.0%
! TCTGTTTTACCGACACCGGT+TGG - Chr7:20642467-20642486 None:intergenic 50.0%
!! GAGTTGACTTTGGGGTTCTG+AGG + Chr7:20647040-20647059 MsG0780037146.01.T01:intron 50.0%
!! GGTAGCACTGATGGGAACAA+AGG + Chr7:20642192-20642211 MsG0780037146.01.T01:CDS 50.0%
!! TTCAGGAGCACTATTCCGTC+AGG + Chr7:20646688-20646707 MsG0780037146.01.T01:intron 50.0%
AAGGGGGACTGGACTACTTC+CGG - Chr7:20645737-20645756 None:intergenic 55.0%
ACTTCGACGTACAACCCGTG+CGG - Chr7:20644340-20644359 None:intergenic 55.0%
AGGAGCGGCTTTACTTCAGG+AGG + Chr7:20646728-20646747 MsG0780037146.01.T01:intron 55.0%
CAGCCTCCTGTAGTGCAAAG+AGG - Chr7:20642089-20642108 None:intergenic 55.0%
CGATGGCCAAGGAAGAACTG+TGG + Chr7:20643056-20643075 MsG0780037146.01.T01:intron 55.0%
CGGGTTGTACGTCGAAGTAG+GGG + Chr7:20644342-20644361 MsG0780037146.01.T01:intron 55.0%
GAGGTTGTAAGCCGATGGAC+CGG + Chr7:20642261-20642280 MsG0780037146.01.T01:CDS 55.0%
GCGCCATTCTGTCAGCACAA+TGG - Chr7:20645037-20645056 None:intergenic 55.0%
GCTAGTCGTCTTGCTGAGAG+AGG + Chr7:20643306-20643325 MsG0780037146.01.T01:intron 55.0%
GCTCCCCCTAAGTTCTATCC+AGG + Chr7:20647139-20647158 MsG0780037146.01.T01:intron 55.0%
GCTCCTCTTTGCACTACAGG+AGG + Chr7:20642083-20642102 MsG0780037146.01.T01:CDS 55.0%
GCTGTAGTGAGATCGAGAGC+TGG + Chr7:20642395-20642414 MsG0780037146.01.T01:intron 55.0%
TCTGGTACATGCTGTGGTGG+AGG - Chr7:20640264-20640283 None:intergenic 55.0%
TGACGAATCTGCACGTTCCG+TGG + Chr7:20640194-20640213 MsG0780037146.01.T01:CDS 55.0%
TTCCTTGGTCCAACCGGTGT+CGG + Chr7:20642455-20642474 MsG0780037146.01.T01:intron 55.0%
TTGCACTACAGGAGGCTGAG+AGG + Chr7:20642091-20642110 MsG0780037146.01.T01:CDS 55.0%
TTGCAGGCGAAGCCGTATTC+TGG + Chr7:20646301-20646320 MsG0780037146.01.T01:intron 55.0%
! CACCGGTTGGACCAAGGAAT+AGG - Chr7:20642454-20642473 None:intergenic 55.0%
! CACGGGTTGTACGTCGAAGT+AGG + Chr7:20644340-20644359 MsG0780037146.01.T01:intron 55.0%
! CAGGAAGCACAGAAGTCACG+CGG + Chr7:20640318-20640337 MsG0780037146.01.T01:CDS 55.0%
! CGCAGCTTCTGATGATGACG+TGG + Chr7:20646630-20646649 MsG0780037146.01.T01:intron 55.0%
! GGTGCCGAGCATCTCATAAG+TGG + Chr7:20643117-20643136 MsG0780037146.01.T01:intron 55.0%
! GTGAGATCGAGAGCTGGTCT+AGG + Chr7:20642401-20642420 MsG0780037146.01.T01:intron 55.0%
! TGATGATGACGTGGCGCTTC+TGG + Chr7:20646639-20646658 MsG0780037146.01.T01:intron 55.0%
! TGTGGTGGAGGCTGTTGAGT+AGG - Chr7:20640252-20640271 None:intergenic 55.0%
!! AGGGCGTCGTCTTCCTGATA+AGG + Chr7:20641531-20641550 MsG0780037146.01.T01:intron 55.0%
!! GATATGGGAGCGTTAGTCGC+TGG + Chr7:20640750-20640769 MsG0780037146.01.T01:CDS 55.0%
CACTACAGGAGGCTGAGAGG+CGG + Chr7:20642094-20642113 MsG0780037146.01.T01:CDS 60.0%
CAGTCCCCCTTGCACTTCCA+AGG + Chr7:20645746-20645765 MsG0780037146.01.T01:intron 60.0%
GTCACGCGGCGACACTCATT+TGG + Chr7:20640332-20640351 MsG0780037146.01.T01:CDS 60.0%
TCGGTCGCGAGCAACTTGCA+TGG - Chr7:20643160-20643179 None:intergenic 60.0%
TGCTCGCGACCGAGTAATGC+TGG + Chr7:20643167-20643186 MsG0780037146.01.T01:intron 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG - Chr7:20645748-20645767 None:intergenic 60.0%
! TACCGACACCGGTTGGACCA+AGG - Chr7:20642460-20642479 None:intergenic 60.0%
!! CTCGGTGCTGGTCGATGTCA+AGG + Chr7:20640879-20640898 MsG0780037146.01.T01:CDS 60.0%
CGTACAACCCGTGCGGAGCA+CGG - Chr7:20644333-20644352 None:intergenic 65.0%
GTACAACCCGTGCGGAGCAC+GGG - Chr7:20644332-20644351 None:intergenic 65.0%
CACGGGCCCGTGCTTAGCAC+GGG - Chr7:20644315-20644334 None:intergenic 70.0%
GCACGGGCCCGTGCTTAGCA+CGG - Chr7:20644316-20644335 None:intergenic 70.0%
! CACGGGCCCGTGCTCCGCAC+GGG + Chr7:20644323-20644342 MsG0780037146.01.T01:intron 80.0%
! GCACGGGCCCGTGCTCCGCA+CGG + Chr7:20644322-20644341 MsG0780037146.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 20640030 20647496 20640030 ID=MsG0780037146.01;Name=MsG0780037146.01
Chr7 mRNA 20640030 20647496 20640030 ID=MsG0780037146.01.T01;Parent=MsG0780037146.01;Name=MsG0780037146.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0.37|0.22|1|0.87|0.77|9|817|502
Chr7 exon 20640030 20640465 20640030 ID=MsG0780037146.01.T01:exon:4072;Parent=MsG0780037146.01.T01
Chr7 exon 20640554 20640683 20640554 ID=MsG0780037146.01.T01:exon:4073;Parent=MsG0780037146.01.T01
Chr7 exon 20640737 20641176 20640737 ID=MsG0780037146.01.T01:exon:4074;Parent=MsG0780037146.01.T01
Chr7 exon 20641533 20641603 20641533 ID=MsG0780037146.01.T01:exon:4075;Parent=MsG0780037146.01.T01
Chr7 exon 20641970 20642400 20641970 ID=MsG0780037146.01.T01:exon:4076;Parent=MsG0780037146.01.T01
Chr7 exon 20642908 20643044 20642908 ID=MsG0780037146.01.T01:exon:4077;Parent=MsG0780037146.01.T01
Chr7 exon 20643341 20643387 20643341 ID=MsG0780037146.01.T01:exon:4078;Parent=MsG0780037146.01.T01
Chr7 exon 20643507 20644099 20643507 ID=MsG0780037146.01.T01:exon:4079;Parent=MsG0780037146.01.T01
Chr7 exon 20647456 20647496 20647456 ID=MsG0780037146.01.T01:exon:4080;Parent=MsG0780037146.01.T01
Chr7 CDS 20640030 20640465 20640030 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 CDS 20640554 20640683 20640554 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 CDS 20640737 20641176 20640737 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 CDS 20641533 20641603 20641533 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 CDS 20641970 20642400 20641970 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 CDS 20642908 20642908 20642908 ID=MsG0780037146.01.T01:cds;Parent=MsG0780037146.01.T01
Chr7 three_prime_UTR 20642909 20643044 20642909 ID=MsG0780037146.01.T01:three_prime_utr;Parent=MsG0780037146.01.T01
Chr7 three_prime_UTR 20643341 20643387 20643341 ID=MsG0780037146.01.T01:three_prime_utr;Parent=MsG0780037146.01.T01
Chr7 three_prime_UTR 20643507 20644099 20643507 ID=MsG0780037146.01.T01:three_prime_utr;Parent=MsG0780037146.01.T01
Chr7 three_prime_UTR 20647456 20647496 20647456 ID=MsG0780037146.01.T01:three_prime_utr;Parent=MsG0780037146.01.T01
Gene Sequence

>MsG0780037146.01.T01

ATGGATCCACGAAAGTTTACAAACAAAACAAACGAATCATTTGCTGTTGCTAGAAAACTAGCAATAAGTTCAGGACATGCTCAGCTCACTCCCGTACACCTTGCATCCACTTTAATTTCTGATCTCAATGGTATATTTTTCCAAGCAATTTCCAATGTCGGTGGTGACGAATCTGCACGTTCCGTGGAAAGAGTTTTAAAACAAGCACTGAAAAAATATCCTACTCAACAGCCTCCACCACAGCATGTACCAGAAAGCTCTTCCATTATCAAAGTCATTGAAAGAGCACAGGAAGCACAGAAGTCACGCGGCGACACTCATTTGGCAATTGATCGATTGATTTTGGGAATTCTTGAGGATTCTCATATTGCAGACTTGTTGACAGAATCTGGTGTGGCTGCTTCTAGGGTTAAATTAGAGGTTGAAAATCTTCGCAGGAAACTTGATCCTGTTATTGGACGTGATGAGGAGATAAGAAGGGTTGTGAGGATTTTGTCAAGAAGGACAAAGAACAATCCTGTTATTATAGGTGAGCCAGGTGTTGGTAAAACAGCTGTTGTTGAAGGGTTATTTGCTTTGGATATGGGAGCGTTAGTCGCTGGTACTCAGTATAGGGGACAATTTGAAGAAAGGTTGAAGGCAGTTTTGAAAGAAGTGGAAGATGCTGAAGGGAAGGTTATTGTTTTCATTGATGAAATTCATCTTGTTCTCGGTGCTGGTCGATGTCAAGGATCAATGGATGCTGCTAATCTTTTCAAACCTATGCTTGCTCGTGGACAACTTAGATGCATCGGTGCAACAACACTTGATGAATATAGGCAATATGTTGAAAAGGATGCTGCATTTGAAAGGAGGTTTCAACAGGTTCATGTTTCTGAACCTAGTGTGCCTGATACCATTAGTATTCTTCGTGGATTAAAAGAGAAATACGAGGGTCATCATGGTGTTCGAATTCAAGACCGTGCAATTGTTGTTGCAGCTCAGATGTCTAGTCGGTACATAACTGGGCGTCGTCTTCCTGATAAGGCAATTGATTTAGTTGACGAGGTTGTGCAAATGTTAGAGTTCAACTTGACAGTGCAGAAAGAACTTCAACAATTAAGAGACAAGCTTCAACCTCTGAAGATGAAGTATAGCAAAGAGAAAGAGAGGATTGATGAGGTTCGAAGACTGAAACAGAAACGTGAAGAGCTCCTCTTTGCACTACAGGAGGCTGAGAGGCGGTATGATCTAGCCAGAGCTGCAGACCTACGATATGGTGCAATTGAAGAGGTGGAAAATGCAATAAAAAATCTTGAAGGTAGCACTGATGGGAACAAAGGTGAGAACTTGATGCTGACGGAAATTGTTGGACCAGATCAAATAGCTGAGGTTGTAAGCCGATGGACCGGTATACCAGTGACTCGTTTAGGCCAAAATGATAAAGAAAGATTGGTTGGACTTGGTGACAGATTGCACAGTAGAGTTGTGGACAAGACCAAGCAGTTAAAGCTGTCGCTGGGGCTGTAG

Protein sequence

>MsG0780037146.01.T01

MDPRKFTNKTNESFAVARKLAISSGHAQLTPVHLASTLISDLNGIFFQAISNVGGDESARSVERVLKQALKKYPTQQPPPQHVPESSSIIKVIERAQEAQKSRGDTHLAIDRLILGILEDSHIADLLTESGVAASRVKLEVENLRRKLDPVIGRDEEIRRVVRILSRRTKNNPVIIGEPGVGKTAVVEGLFALDMGALVAGTQYRGQFEERLKAVLKEVEDAEGKVIVFIDEIHLVLGAGRCQGSMDAANLFKPMLARGQLRCIGATTLDEYRQYVEKDAAFERRFQQVHVSEPSVPDTISILRGLKEKYEGHHGVRIQDRAIVVAAQMSSRYITGRRLPDKAIDLVDEVVQMLEFNLTVQKELQQLRDKLQPLKMKYSKEKERIDEVRRLKQKREELLFALQEAERRYDLARAADLRYGAIEEVENAIKNLEGSTDGNKGENLMLTEIVGPDQIAEVVSRWTGIPVTRLGQNDKERLVGLGDRLHSRVVDKTKQLKLSLGL*