AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0721080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721080 MtrunA17_Chr5g0411971 98.768 1055 12 1 1 1055 1 1054 0.0 2154
Msa0721080 MtrunA17_Chr5g0421521 96.272 912 30 2 26 937 1 908 0.0 1808
Msa0721080 MtrunA17_Chr5g0421591 97.701 870 19 1 26 895 1 869 0.0 1755
Msa0721080 MtrunA17_Chr2g0312631 54.266 586 237 7 243 818 241 805 0.0 606
Msa0721080 MtrunA17_Chr1g0191851 55.324 479 205 4 328 802 76 549 1.95e-174 530
Msa0721080 MtrunA17_Chr7g0272871 52.242 513 231 7 301 808 32 535 5.91e-167 508
Msa0721080 MtrunA17_Chr1g0195111 43.508 439 225 6 328 757 334 758 2.10e-105 353
Msa0721080 MtrunA17_Chr1g0192481 47.439 371 181 4 380 740 38 404 9.83e-104 337
Msa0721080 MtrunA17_Chr7g0271961 48.684 380 172 6 380 746 381 750 4.13e-102 344
Msa0721080 MtrunA17_Chr3g0102921 40.000 460 249 6 323 761 364 817 3.80e-96 330
Msa0721080 MtrunA17_Chr7g0257301 44.175 412 189 7 380 756 372 777 1.16e-94 325
Msa0721080 MtrunA17_Chr5g0447041 41.324 438 204 7 370 757 404 838 1.09e-93 323
Msa0721080 MtrunA17_Chr4g0042061 39.440 464 242 7 287 732 340 782 1.10e-90 308
Msa0721080 MtrunA17_Chr2g0319271 39.787 470 258 8 280 729 283 747 1.38e-88 301
Msa0721080 MtrunA17_Chr2g0280421 44.236 373 199 7 366 730 403 774 1.22e-83 288
Msa0721080 MtrunA17_Chr8g0369881 41.823 373 213 3 372 743 847 1216 1.12e-82 293
Msa0721080 MtrunA17_Chr5g0407791 40.394 406 231 5 372 775 861 1257 1.19e-82 293
Msa0721080 MtrunA17_Chr4g0049011 36.492 496 259 9 249 725 163 621 3.93e-81 277
Msa0721080 MtrunA17_Chr1g0191181 39.726 438 226 10 353 770 39 458 7.46e-80 273
Msa0721080 MtrunA17_Chr8g0367581 34.426 549 299 13 331 838 69 597 6.12e-68 249
Msa0721080 MtrunA17_Chr4g0045381 39.776 357 190 8 400 736 193 544 7.24e-62 231
Msa0721080 MtrunA17_Chr1g0182151 37.571 354 196 8 400 730 54 405 2.73e-60 224
Msa0721080 MtrunA17_Chr2g0322291 40.503 358 186 9 400 736 88 439 3.88e-60 225
Msa0721080 MtrunA17_Chr2g0327581 31.495 562 314 17 392 899 40 584 6.28e-60 223
Msa0721080 MtrunA17_Chr1g0178411 33.202 509 286 14 400 858 13 517 4.62e-57 214
Msa0721080 MtrunA17_Chr3g0132921 36.571 350 187 8 400 723 9 349 9.11e-57 205
Msa0721080 MtrunA17_Chr4g0069141 38.040 347 184 9 400 723 153 491 1.78e-56 214
Msa0721080 MtrunA17_Chr7g0266631 32.024 509 292 14 400 858 9 513 3.71e-56 211
Msa0721080 MtrunA17_Chr4g0062291 38.547 358 199 6 393 737 116 465 5.04e-56 207
Msa0721080 MtrunA17_Chr3g0122121 35.750 400 220 12 392 763 88 478 3.19e-55 209
Msa0721080 MtrunA17_Chr5g0427481 36.857 350 185 9 401 723 18 358 7.49e-55 208
Msa0721080 MtrunA17_Chr2g0307481 35.411 401 233 9 348 735 18 405 9.26e-55 202
Msa0721080 MtrunA17_Chr3g0134191 37.027 370 180 11 401 727 9 368 1.09e-54 207
Msa0721080 MtrunA17_Chr4g0053211 34.826 402 204 13 400 753 12 403 3.92e-53 202
Msa0721080 MtrunA17_Chr1g0153061 35.792 366 190 8 401 727 9 368 5.49e-52 199
Msa0721080 MtrunA17_Chr7g0269681 48.293 205 106 0 550 754 21 225 2.97e-51 188
Msa0721080 MtrunA17_Chr7g0258991 33.017 421 259 12 395 809 68 471 1.34e-50 194
Msa0721080 MtrunA17_Chr1g0193221 37.015 335 186 8 401 722 4 326 4.16e-50 193
Msa0721080 MtrunA17_Chr5g0398521 31.760 551 298 18 399 908 56 569 9.87e-50 191
Msa0721080 MtrunA17_Chr8g0377731 36.011 361 185 10 445 778 91 432 1.10e-49 192
Msa0721080 MtrunA17_Chr1g0152231 37.874 301 171 5 435 722 36 333 4.49e-49 188
Msa0721080 MtrunA17_Chr7g0245931 33.902 410 218 12 399 772 51 443 4.26e-48 186
Msa0721080 MtrunA17_Chr4g0035661 35.000 340 204 9 398 731 87 415 3.50e-46 180
Msa0721080 MtrunA17_Chr3g0145071 34.493 345 209 9 393 731 92 425 1.42e-45 179
Msa0721080 MtrunA17_Chr8g0386891 48.205 195 95 2 570 761 4 195 4.81e-45 168
Msa0721080 MtrunA17_Chr7g0238581 31.675 382 234 11 401 764 26 398 3.72e-44 171
Msa0721080 MtrunA17_Chr8g0390991 56.287 167 73 0 570 736 4 170 6.03e-44 169
Msa0721080 MtrunA17_Chr6g0484501 48.768 203 98 2 562 761 26 225 1.90e-43 158
Msa0721080 MtrunA17_Chr6g0484511 35.448 268 140 7 358 614 251 496 2.26e-43 165
Msa0721080 MtrunA17_Chr4g0070001 33.245 376 228 10 401 767 144 505 2.96e-43 171
Msa0721080 MtrunA17_Chr6g0483701 28.479 618 360 23 401 954 31 630 1.42e-42 169
Msa0721080 MtrunA17_Chr8g0390981 44.776 201 83 5 370 549 475 668 1.43e-42 166
Msa0721080 MtrunA17_Chr7g0269691 43.407 182 82 3 380 549 380 552 3.13e-41 160
Msa0721080 MtrunA17_Chr5g0405181 31.905 420 249 14 401 799 21 424 1.62e-40 162
Msa0721080 MtrunA17_Chr3g0101021 33.051 354 196 12 400 727 75 413 2.24e-40 162
Msa0721080 MtrunA17_Chr4g0036001 31.850 427 263 13 382 797 7 416 3.85e-40 160
Msa0721080 MtrunA17_Chr8g0386901 45.506 178 86 5 380 549 463 637 1.36e-39 157
Msa0721080 MtrunA17_Chr5g0445211 30.467 407 231 15 400 767 74 467 4.69e-39 158
Msa0721080 MtrunA17_Chr8g0372171 32.836 335 201 9 401 722 20 343 2.80e-37 152
Msa0721080 MtrunA17_Chr2g0331761 32.448 339 202 10 401 725 186 511 6.62e-37 149
Msa0721080 MtrunA17_Chr3g0142261 31.527 406 244 10 401 794 20 403 2.71e-36 149
Msa0721080 MtrunA17_Chr6g0485471 31.751 337 207 8 401 725 116 441 3.48e-36 146
Msa0721080 MtrunA17_Chr4g0067421 33.237 346 195 10 401 722 206 539 1.18e-34 143
Msa0721080 MtrunA17_Chr2g0295881 32.174 345 202 10 401 722 198 533 3.62e-33 138
Msa0721080 MtrunA17_Chr1g0187411 28.063 506 281 20 422 881 137 605 6.42e-32 134
Msa0721080 MtrunA17_Chr6g0470541 28.344 314 204 11 397 702 2 302 2.77e-22 103
Msa0721080 MtrunA17_Chr3g0142841 23.975 488 304 16 447 915 145 584 5.55e-21 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721080 AT2G22610.3 59.452 1058 389 12 23 1055 42 1084 0.0 1228
Msa0721080 AT2G22610.2 60.134 1041 387 13 23 1055 42 1062 0.0 1224
Msa0721080 AT2G22610.1 59.263 1058 390 13 23 1055 42 1083 0.0 1221
Msa0721080 AT1G72250.4 49.476 764 344 8 61 801 172 916 0.0 727
Msa0721080 AT1G72250.3 49.476 764 344 8 61 801 173 917 0.0 726
Msa0721080 AT1G72250.2 48.691 764 338 9 61 801 173 905 0.0 703
Msa0721080 AT1G72250.1 48.168 764 334 9 61 801 172 896 0.0 689
Msa0721080 AT5G27550.2 55.187 482 202 5 328 802 60 534 1.94e-175 532
Msa0721080 AT5G27550.1 55.187 482 202 5 328 802 60 534 1.94e-175 532
Msa0721080 AT2G47500.2 47.912 407 195 4 380 779 379 775 4.64e-110 365
Msa0721080 AT1G09170.4 51.351 370 166 5 380 740 414 778 7.89e-110 362
Msa0721080 AT2G47500.1 47.215 413 201 5 380 780 379 786 1.20e-109 365
Msa0721080 AT1G09170.3 51.351 370 166 5 380 740 414 778 1.41e-109 360
Msa0721080 AT1G09170.7 51.351 370 166 5 380 740 414 778 1.41e-109 360
Msa0721080 AT1G09170.2 51.351 370 166 5 380 740 414 778 4.72e-109 361
Msa0721080 AT1G09170.5 51.351 370 166 5 380 740 414 778 3.41e-108 362
Msa0721080 AT5G27000.1 48.593 391 179 4 358 740 363 739 7.60e-108 360
Msa0721080 AT1G73860.2 45.387 401 202 6 380 768 406 801 1.44e-104 350
Msa0721080 AT1G73860.1 38.779 557 295 12 240 768 346 884 4.31e-104 350
Msa0721080 AT1G18410.3 39.382 518 294 8 260 760 341 855 5.95e-104 350
Msa0721080 AT1G18410.2 39.382 518 294 8 260 760 341 855 5.95e-104 350
Msa0721080 AT1G18410.4 45.823 395 202 4 375 760 607 998 3.50e-102 348
Msa0721080 AT1G18410.5 41.513 489 260 10 260 732 331 809 8.13e-102 343
Msa0721080 AT3G44730.1 45.631 412 208 6 358 760 339 743 6.24e-101 343
Msa0721080 AT3G44730.4 45.631 412 208 6 358 760 339 743 6.24e-101 343
Msa0721080 AT3G44730.2 45.631 412 208 6 358 760 384 788 1.17e-100 343
Msa0721080 AT3G44730.3 45.631 412 208 6 358 760 384 788 1.17e-100 343
Msa0721080 AT1G18410.1 39.652 517 286 9 260 760 484 990 2.91e-100 342
Msa0721080 AT3G10310.1 45.974 385 192 6 380 754 343 721 4.41e-98 332
Msa0721080 AT3G10310.2 45.974 385 192 6 380 754 343 721 5.35e-98 332
Msa0721080 AT5G41310.1 43.299 388 184 5 386 761 408 771 6.12e-93 318
Msa0721080 AT1G63640.1 45.205 365 194 3 370 728 442 806 1.49e-91 317
Msa0721080 AT1G63640.4 45.205 365 194 3 370 728 442 806 1.49e-91 317
Msa0721080 AT1G63640.3 45.205 365 194 3 370 728 442 806 1.51e-91 317
Msa0721080 AT1G63640.5 45.205 365 194 3 370 728 432 796 1.73e-91 316
Msa0721080 AT1G09170.6 51.258 318 141 5 380 688 414 726 3.96e-91 308
Msa0721080 AT1G09170.8 51.258 318 141 5 380 688 414 726 3.96e-91 308
Msa0721080 AT4G27180.1 42.206 417 223 6 336 736 324 738 2.73e-90 306
Msa0721080 AT4G27180.2 42.206 417 223 6 336 736 324 738 2.73e-90 306
Msa0721080 AT4G21270.1 39.463 484 245 9 275 733 323 783 4.86e-90 306
Msa0721080 AT5G54670.3 43.299 388 205 5 365 737 301 688 3.73e-89 301
Msa0721080 AT5G54670.1 43.299 388 205 5 365 737 361 748 1.18e-88 301
Msa0721080 AT5G54670.2 43.299 388 205 5 365 737 361 748 1.18e-88 301
Msa0721080 AT1G63640.2 44.505 364 191 3 370 728 442 799 1.23e-88 308
Msa0721080 AT1G55550.1 41.766 419 218 7 366 770 57 463 6.55e-87 299
Msa0721080 AT4G05190.1 40.135 446 231 10 317 730 336 777 8.61e-87 297
Msa0721080 AT4G05190.2 38.229 463 244 7 288 730 324 764 9.56e-87 297
Msa0721080 AT5G65930.2 41.076 409 224 5 372 775 860 1256 2.58e-85 301
Msa0721080 AT1G09170.1 45.405 370 152 6 380 740 414 742 2.62e-85 298
Msa0721080 AT5G65930.1 41.076 409 224 5 372 775 859 1255 2.96e-85 301
Msa0721080 AT5G65930.3 41.076 409 224 5 372 775 866 1262 3.22e-85 301
Msa0721080 AT5G27950.1 40.394 406 207 8 353 740 30 418 6.16e-79 271
Msa0721080 AT5G65460.6 32.859 633 363 16 312 914 35 635 4.79e-70 254
Msa0721080 AT5G65460.2 32.859 633 363 16 312 914 35 635 9.82e-70 254
Msa0721080 AT5G65460.4 32.859 633 363 16 312 914 35 635 1.34e-69 254
Msa0721080 AT5G65460.1 32.859 633 363 16 312 914 35 635 1.39e-69 254
Msa0721080 AT5G65460.3 32.500 640 363 17 312 914 35 642 2.49e-67 248
Msa0721080 AT5G10470.2 30.501 659 389 15 312 928 46 677 3.18e-66 244
Msa0721080 AT5G10470.1 30.501 659 389 15 312 928 46 677 3.20e-66 244
Msa0721080 AT3G19050.1 39.828 349 183 10 400 727 193 535 8.58e-61 228
Msa0721080 AT2G37420.1 33.406 458 269 10 400 834 48 492 9.12e-61 226
Msa0721080 AT2G37420.2 33.406 458 269 10 400 834 48 492 9.12e-61 226
Msa0721080 AT2G28620.3 34.369 483 265 11 400 855 50 507 1.28e-60 226
Msa0721080 AT2G28620.2 34.369 483 265 11 400 855 50 507 1.28e-60 226
Msa0721080 AT2G28620.1 34.369 483 265 11 400 855 50 507 1.60e-60 225
Msa0721080 AT3G45850.2 32.290 511 295 13 400 884 55 540 1.19e-58 220
Msa0721080 AT3G45850.1 32.290 511 295 13 400 884 55 540 1.19e-58 220
Msa0721080 AT2G36200.1 33.594 512 280 16 400 858 12 516 2.16e-58 219
Msa0721080 AT3G44050.1 39.944 358 188 9 400 736 93 444 4.22e-58 219
Msa0721080 AT4G14150.1 37.433 374 197 10 401 749 92 453 6.00e-58 219
Msa0721080 AT5G60930.1 30.488 574 331 14 401 912 7 574 1.46e-57 218
Msa0721080 AT5G60930.3 31.023 577 324 16 401 912 7 574 2.29e-57 217
Msa0721080 AT5G60930.2 30.488 574 331 14 401 912 7 574 2.49e-57 217
Msa0721080 AT3G17360.2 34.685 444 212 13 400 788 168 588 5.06e-57 216
Msa0721080 AT3G17360.3 37.845 362 164 10 400 723 168 506 1.32e-56 215
Msa0721080 AT3G17360.1 37.845 362 164 10 400 723 168 506 1.38e-56 215
Msa0721080 AT3G63480.2 32.536 418 247 8 444 850 47 440 9.28e-55 198
Msa0721080 AT3G23670.2 38.506 348 177 10 401 723 97 432 9.88e-55 207
Msa0721080 AT3G23670.1 38.506 348 177 10 401 723 97 432 1.50e-54 208
Msa0721080 AT1G18550.1 38.323 334 190 5 401 722 152 481 2.77e-54 203
Msa0721080 AT3G63480.1 32.938 422 244 10 444 850 47 444 3.14e-54 197
Msa0721080 AT2G36200.2 31.978 541 281 18 400 858 12 547 1.10e-53 204
Msa0721080 AT3G49650.1 33.256 430 258 9 401 805 15 440 2.38e-53 201
Msa0721080 AT1G01950.1 34.598 448 237 16 399 807 59 489 8.69e-52 197
Msa0721080 AT1G01950.2 34.598 448 237 16 399 807 59 489 9.12e-52 197
Msa0721080 AT1G01950.3 34.598 448 237 16 399 807 59 489 1.03e-51 197
Msa0721080 AT5G47820.2 34.501 371 194 8 400 727 11 375 1.49e-51 197
Msa0721080 AT5G47820.1 34.501 371 194 8 400 727 11 375 1.49e-51 197
Msa0721080 AT3G54870.3 27.946 594 324 17 444 947 149 728 6.27e-51 195
Msa0721080 AT3G54870.1 28.067 595 323 17 444 947 149 729 6.66e-51 195
Msa0721080 AT1G21730.1 34.933 375 224 9 398 766 73 433 1.23e-50 194
Msa0721080 AT3G54870.2 28.067 595 323 17 444 947 149 729 1.33e-50 195
Msa0721080 AT3G50240.2 34.545 385 202 10 401 743 26 402 2.65e-50 193
Msa0721080 AT3G50240.4 34.545 385 202 10 401 743 26 402 1.04e-49 192
Msa0721080 AT3G50240.1 34.545 385 202 10 401 743 26 402 1.07e-49 192
Msa0721080 AT1G59540.1 37.710 297 169 6 436 722 35 325 1.96e-49 189
Msa0721080 AT5G27950.2 41.634 257 136 4 493 740 1 252 2.42e-48 179
Msa0721080 AT1G12430.1 36.096 374 188 11 401 738 71 429 2.97e-48 187
Msa0721080 AT1G12430.2 36.096 374 188 11 401 738 71 429 3.15e-48 186
Msa0721080 AT3G10180.1 35.326 368 210 11 401 752 4 359 3.76e-48 187
Msa0721080 AT3G12020.4 32.439 410 253 13 394 796 63 455 3.85e-48 186
Msa0721080 AT3G12020.1 32.439 410 253 13 394 796 63 455 3.85e-48 186
Msa0721080 AT3G10180.2 35.326 368 210 11 401 752 4 359 4.25e-48 187
Msa0721080 AT3G12020.3 32.439 410 253 13 394 796 63 455 4.92e-48 187
Msa0721080 AT3G12020.2 32.439 410 253 13 394 796 63 455 4.92e-48 187
Msa0721080 AT5G06670.5 32.011 378 237 9 396 767 62 425 5.21e-48 184
Msa0721080 AT5G06670.8 32.011 378 237 9 396 767 62 425 6.21e-48 184
Msa0721080 AT5G06670.4 32.011 378 237 9 396 767 62 425 6.21e-48 184
Msa0721080 AT5G06670.7 32.011 378 237 9 396 767 62 425 6.21e-48 184
Msa0721080 AT5G06670.2 32.011 378 237 9 396 767 62 425 2.34e-47 184
Msa0721080 AT5G06670.3 32.011 378 237 9 396 767 62 425 2.34e-47 184
Msa0721080 AT4G39050.1 34.262 359 221 9 378 731 76 424 3.94e-47 184
Msa0721080 AT5G06670.6 31.525 387 236 10 396 767 62 434 7.84e-46 179
Msa0721080 AT5G06670.1 31.525 387 236 10 396 767 62 434 7.84e-46 179
Msa0721080 AT2G21380.2 34.118 340 207 9 398 731 102 430 5.05e-45 177
Msa0721080 AT2G21380.1 34.118 340 207 9 398 731 102 430 5.05e-45 177
Msa0721080 AT1G18370.1 32.512 406 247 12 401 790 32 426 1.72e-44 175
Msa0721080 AT1G01950.4 35.574 357 192 12 480 807 1 348 8.71e-44 171
Msa0721080 AT5G02370.1 31.454 337 201 8 400 722 20 340 4.36e-41 160
Msa0721080 AT3G50240.3 37.333 300 146 7 484 743 3 300 7.58e-41 163
Msa0721080 AT2G21300.2 33.422 377 217 13 401 766 25 378 9.60e-40 159
Msa0721080 AT2G21300.4 33.422 377 217 13 401 766 25 378 9.60e-40 159
Msa0721080 AT2G21300.3 33.422 377 217 13 401 766 25 378 9.60e-40 159
Msa0721080 AT2G21300.1 33.422 377 217 13 401 766 25 378 9.60e-40 159
Msa0721080 AT2G21300.5 33.422 377 217 13 401 766 25 378 9.60e-40 159
Msa0721080 AT4G24170.1 33.435 329 203 7 401 722 7 326 1.10e-39 160
Msa0721080 AT4G24170.2 33.435 329 203 7 401 722 7 326 1.10e-39 160
Msa0721080 AT3G43210.3 36.446 332 188 10 401 722 30 348 1.24e-39 159
Msa0721080 AT3G43210.5 36.446 332 188 10 401 722 30 348 1.24e-39 159
Msa0721080 AT3G43210.2 36.446 332 188 10 401 722 30 348 1.24e-39 159
Msa0721080 AT3G43210.4 36.446 332 188 10 401 722 30 348 1.24e-39 159
Msa0721080 AT3G43210.1 36.446 332 188 10 401 722 30 348 1.24e-39 159
Msa0721080 AT4G38950.3 31.579 418 242 14 401 797 14 408 1.61e-39 159
Msa0721080 AT4G38950.5 31.579 418 242 14 401 797 14 408 1.61e-39 159
Msa0721080 AT4G38950.4 31.579 418 242 14 401 797 14 408 1.61e-39 159
Msa0721080 AT4G38950.1 31.579 418 242 14 401 797 14 408 1.61e-39 159
Msa0721080 AT4G38950.2 31.579 418 242 14 401 797 14 408 1.61e-39 159
Msa0721080 AT3G16060.1 32.676 355 206 10 393 730 162 500 1.60e-38 154
Msa0721080 AT5G66310.2 32.533 458 255 15 401 842 19 438 3.31e-38 155
Msa0721080 AT5G66310.3 32.533 458 255 15 401 842 19 438 3.31e-38 155
Msa0721080 AT5G66310.1 32.533 458 255 15 401 842 19 438 3.31e-38 155
Msa0721080 AT1G59540.2 38.075 239 133 5 493 722 1 233 8.56e-38 152
Msa0721080 AT3G51150.2 32.095 377 220 11 401 764 18 371 5.36e-36 148
Msa0721080 AT3G51150.4 32.095 377 220 11 401 764 18 371 5.36e-36 148
Msa0721080 AT3G51150.3 32.095 377 220 11 401 764 18 371 5.36e-36 148
Msa0721080 AT3G51150.1 32.095 377 220 11 401 764 18 371 5.78e-36 148
Msa0721080 AT3G20150.2 33.333 318 177 10 443 731 134 445 9.41e-36 147
Msa0721080 AT3G20150.1 33.333 318 177 10 443 731 134 445 1.18e-35 147
Msa0721080 AT5G65460.5 31.750 400 241 9 523 914 14 389 1.11e-34 144
Msa0721080 AT3G16630.2 32.471 348 194 10 401 722 194 526 6.42e-34 140
Msa0721080 AT3G16630.1 32.471 348 194 10 401 722 194 526 6.42e-34 140
Msa0721080 AT4G14330.1 31.111 360 198 9 474 795 120 467 7.30e-29 125
Msa0721080 AT5G42490.2 31.636 275 166 9 401 665 10 272 8.95e-24 109
Msa0721080 AT5G42490.1 31.636 275 166 9 401 665 10 272 9.69e-24 108
Msa0721080 AT5G23910.2 28.571 301 187 12 441 732 55 336 4.04e-21 100
Msa0721080 AT5G23910.1 28.571 301 187 12 441 732 51 332 4.64e-21 99.8
Msa0721080 AT3G51150.5 37.500 184 97 5 587 764 47 218 4.69e-19 93.6
Msa0721080 AT1G20060.9 26.259 278 183 6 447 709 165 435 1.95e-14 78.6
Msa0721080 AT1G20060.10 26.259 278 183 6 447 709 165 435 2.06e-14 78.6
Msa0721080 AT1G20060.5 27.046 281 177 7 447 709 165 435 2.07e-14 78.6
Msa0721080 AT1G20060.8 26.259 278 183 6 447 709 165 435 2.14e-14 78.6
Msa0721080 AT1G20060.3 26.259 278 183 6 447 709 165 435 2.15e-14 78.6
Msa0721080 AT1G20060.4 26.259 278 183 6 447 709 165 435 2.20e-14 78.6
Msa0721080 AT1G20060.6 27.046 281 177 7 447 709 165 435 2.22e-14 78.6
Msa0721080 AT1G20060.2 26.259 278 183 6 447 709 165 435 2.24e-14 78.6
Msa0721080 AT1G20060.7 27.046 281 177 7 447 709 165 435 2.79e-14 78.2

Find 205 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTTGGTTTGGGATT+AGG 0.130212 5_1:+17501409 None:intergenic
CAAGGTTCTGCTTTGTTAAA+AGG 0.137796 5_1:-17494418 Msa0721080:CDS
GTTGAGATTATTAATGTAAA+TGG 0.154741 5_1:-17500681 Msa0721080:CDS
AGATGGATGCCTTGGGATTT+TGG 0.163876 5_1:-17499087 Msa0721080:CDS
TTCTTGTTGGTTTGGGATTA+GGG 0.178973 5_1:+17501410 None:intergenic
TAAACCATCTTATTTAATTC+AGG 0.204428 5_1:+17499547 None:intergenic
CAAGCTTTGGCTTGTGGATT+TGG 0.229101 5_1:-17496515 Msa0721080:CDS
ATAAGATTTGAGAGTTTAAA+TGG 0.237236 5_1:-17500425 Msa0721080:CDS
CTGAATCTTCTTGTTGGTTT+GGG 0.243087 5_1:+17501403 None:intergenic
ACTGAATCTTCTTGTTGGTT+TGG 0.265705 5_1:+17501402 None:intergenic
CACATACCTTGATCATCTTT+TGG 0.269100 5_1:+17499017 None:intergenic
GTATCAATTTGCTTCTTAAC+AGG 0.277522 5_1:+17495993 None:intergenic
CCATTACTGAATCTTCTTGT+TGG 0.280962 5_1:+17501397 None:intergenic
AACGTTTGCATCTTTGCTTA+TGG 0.282569 5_1:-17497219 Msa0721080:CDS
CCGTTGTCGACCATTGAATA+AGG 0.288290 5_1:-17499159 Msa0721080:CDS
AGTTCAAAACTCATTCAAAA+TGG 0.289625 5_1:-17501330 Msa0721080:CDS
TTCACCAGATCTCAAAATTC+AGG 0.292712 5_1:-17501306 Msa0721080:intron
GTAACAACAGTTGCTGATAT+TGG 0.294895 5_1:-17494105 Msa0721080:three_prime_UTR
AACTGAAATGAGTAGGAAAA+TGG 0.302903 5_1:-17499972 Msa0721080:CDS
AGAAGCAATTATCAGTTTAC+AGG 0.305197 5_1:-17499741 Msa0721080:CDS
ATACGGAATGTGACTACTTT+TGG 0.321955 5_1:+17496381 None:intergenic
AATCGTTCTCTTTCTGCTCT+TGG 0.327968 5_1:-17496427 Msa0721080:CDS
AAAATAGAGGTGTAAATTAC+AGG 0.330423 5_1:-17497152 Msa0721080:CDS
GAGAAACTTGTTTCTCTGAT+TGG 0.336888 5_1:+17495674 None:intergenic
CTATCAAACGAATTTCAAAA+TGG 0.342077 5_1:-17501472 Msa0721080:exon
CTAGCTCTCTTATGAGATAA+AGG 0.344366 5_1:+17494211 None:intergenic
TTGTTTGTGGGATCTGCATT+AGG 0.348420 5_1:-17500394 Msa0721080:CDS
AGGTGTGGCCGCCACCTTTA+CGG 0.352301 5_1:+17494534 None:intergenic
ATGAACTTGATAAGAAGAAA+TGG 0.365625 5_1:-17499766 Msa0721080:CDS
TTTGCAAAACATTGAGAGTA+AGG 0.368146 5_1:-17495785 Msa0721080:CDS
GTTCAGCATGCTATGTATAA+TGG 0.369898 5_1:-17496578 Msa0721080:intron
ATGCAGATCCCACAAACAAC+TGG 0.371778 5_1:+17500398 None:intergenic
GGTTTGGGATTAGGGTTTGT+GGG 0.373957 5_1:+17501418 None:intergenic
CTGGCAGGTTCTATCTGAAT+TGG 0.375454 5_1:-17500531 Msa0721080:intron
AAGCAGAACCTTGACTTATC+TGG 0.377957 5_1:+17494428 None:intergenic
ATCTTTGCTTATGGACAAAC+AGG 0.385232 5_1:-17497210 Msa0721080:CDS
GCATTTGTTTAGAGTTAGTA+AGG 0.386562 5_1:-17497121 Msa0721080:CDS
TGGTTTGGGATTAGGGTTTG+TGG 0.397522 5_1:+17501417 None:intergenic
ATGCGACTCTCAATATCATT+TGG 0.398877 5_1:+17494478 None:intergenic
CCGCACGAATGAGGCGATAG+TGG 0.400753 5_1:-17500808 Msa0721080:CDS
GACATTTCAACCTTATTCAA+TGG 0.408709 5_1:+17499149 None:intergenic
GCTTATGGACAAACAGGAAC+AGG 0.410003 5_1:-17497204 Msa0721080:CDS
AATCCCTGAATTAAATAAGA+TGG 0.412442 5_1:-17499551 Msa0721080:CDS
AAGGTTCTGCTTTGTTAAAA+GGG 0.417581 5_1:-17494417 Msa0721080:CDS
CCGCCTAAAATTGTAAGAAC+TGG 0.418408 5_1:-17494274 Msa0721080:CDS
CTACGGGACCAGCATCAAAA+AGG 0.418800 5_1:-17497020 Msa0721080:intron
CGGGCCACTGTGAAGGATGA+TGG 0.419376 5_1:-17500458 Msa0721080:CDS
TTGAACACCCTCATTCCTTT+CGG 0.419530 5_1:+17500657 None:intergenic
AAAGTATGAAAATAAGATAA+AGG 0.423243 5_1:-17500053 Msa0721080:CDS
GTGGATATTATCCTTTCCCT+TGG 0.424834 5_1:+17495762 None:intergenic
AGAGTGAGGGGCGTTGAGTT+AGG 0.425970 5_1:-17496017 Msa0721080:CDS
TCACTTGATCAAGCTCCATC+TGG 0.426399 5_1:+17499942 None:intergenic
CTTTGGCTTGTGGATTTGGC+AGG 0.427922 5_1:-17496511 Msa0721080:CDS
TTGAGATTATTAATGTAAAT+GGG 0.429309 5_1:-17500680 Msa0721080:CDS
AATTAATAGGTATACCTATA+CGG 0.433664 5_1:+17496364 None:intergenic
AAACCATCTTATTTAATTCA+GGG 0.438958 5_1:+17499548 None:intergenic
GGAAGCAATGCTAGAGCAGT+TGG 0.441485 5_1:-17496751 Msa0721080:CDS
TGAAATTCGTTGGATTGAAT+CGG 0.445524 5_1:+17501447 None:intergenic
GGAGGGGAGGCGACTAATGA+AGG 0.451939 5_1:-17500885 Msa0721080:CDS
ATCAATGGTAATCTCTGTGC+TGG 0.454206 5_1:-17497250 Msa0721080:CDS
AGCTAGCACAAGCAGAGATC+AGG 0.455058 5_1:-17494194 Msa0721080:CDS
ATCTTCCTTTCTAAAAGATA+AGG 0.457713 5_1:-17495030 Msa0721080:intron
ATGCTGGTCCCGTAGCCAAT+AGG 0.459089 5_1:+17497028 None:intergenic
GGTTTATGCAGTACAGGAGT+TGG 0.461163 5_1:-17499530 Msa0721080:CDS
TCAATTATGCGAAAAGTTGA+AGG 0.461459 5_1:-17495653 Msa0721080:CDS
GTGGCGGCCACACCTGATAT+AGG 0.464738 5_1:-17494526 Msa0721080:CDS
CTGCTGTACTCTTCAACATA+AGG 0.465376 5_1:-17495617 Msa0721080:intron
TGAACAAATCAGAGACCTAT+TGG 0.466284 5_1:-17497043 Msa0721080:CDS
CACTACAGCTGATTGATTGT+CGG 0.468814 5_1:-17500478 Msa0721080:CDS
ATGGAAGCCCAGTTGTTTGT+GGG 0.469083 5_1:-17500406 Msa0721080:CDS
GACAGCAAATTTCCAACAGA+AGG 0.470847 5_1:-17495296 Msa0721080:intron
CAAGAGCAAGCTTTGGCTTG+TGG 0.470882 5_1:-17496521 Msa0721080:CDS
GTTAAGAAGCAAATTGATAC+AGG 0.478187 5_1:-17495990 Msa0721080:CDS
AGTGATTATGTCATATTGAA+TGG 0.478934 5_1:-17493974 Msa0721080:three_prime_UTR
GAAAAGATTAAAGAACTTGA+AGG 0.479522 5_1:-17495727 Msa0721080:CDS
GGAATCCTTGCTAAAACAAC+AGG 0.479953 5_1:-17494861 Msa0721080:intron
ACTACAGCTGATTGATTGTC+GGG 0.480686 5_1:-17500477 Msa0721080:CDS
TGTTTAGAGTTAGTAAGGAA+AGG 0.483579 5_1:-17497116 Msa0721080:CDS
TGGGTCATTGTGAAATTCGT+TGG 0.483777 5_1:+17501437 None:intergenic
AATGGAAGCCCAGTTGTTTG+TGG 0.489492 5_1:-17500407 Msa0721080:CDS
GGGCCACTGTGAAGGATGAT+GGG 0.489671 5_1:-17500457 Msa0721080:CDS
TGAACTTGATAAGAAGAAAT+GGG 0.489705 5_1:-17499765 Msa0721080:CDS
GTTTATGCAGTACAGGAGTT+GGG 0.491474 5_1:-17499529 Msa0721080:intron
TAAGATGGTTTATGCAGTAC+AGG 0.497109 5_1:-17499536 Msa0721080:CDS
AAAGTAGTCACATTCCGTAT+AGG 0.497608 5_1:-17496378 Msa0721080:intron
AACACATTCATGTGCTTCAA+AGG 0.501458 5_1:+17499579 None:intergenic
CTGTTATGTTGAAGCCGTAA+AGG 0.501805 5_1:-17494548 Msa0721080:CDS
GCAGCAAAAGATGGATGCCT+TGG 0.502223 5_1:-17499095 Msa0721080:CDS
TCAGAGTCTCACCGACATCC+TGG 0.502411 5_1:+17496060 None:intergenic
AATGAAGTTCAAGAGGCTAA+AGG 0.507487 5_1:-17499323 Msa0721080:intron
ATCTGTTAGAAATACTCCTC+AGG 0.508847 5_1:+17499789 None:intergenic
AGTGTACCAAGAGCAAGCTT+TGG 0.509566 5_1:-17496528 Msa0721080:CDS
TTACATTCAATGAAATCGCT+TGG 0.510215 5_1:+17500243 None:intergenic
GTCACTTATGTTGTCAACCT+TGG 0.512217 5_1:+17496795 None:intergenic
ATGAAATCGCTTGGCACTGG+TGG 0.513500 5_1:+17500252 None:intergenic
AGAATTGATAACCTTCCTCC+TGG 0.517199 5_1:-17500729 Msa0721080:CDS
GATTGAAATTCCTTCATCAC+AGG 0.517243 5_1:-17500205 Msa0721080:intron
TGTTTACATACAAGAAGAAA+AGG 0.517798 5_1:-17500634 Msa0721080:intron
TACTATGCAGTGTGAGCTCA+AGG 0.520324 5_1:-17500026 Msa0721080:CDS
AGGAGAGCGACAAAAGAGTC+AGG 0.520784 5_1:-17500374 Msa0721080:intron
TGAGAGAAAACTGAAAGAGC+AGG 0.520980 5_1:-17494894 Msa0721080:CDS
CACAAGCCAAAGCTTGCTCT+TGG 0.521131 5_1:+17496522 None:intergenic
TGATGAAGAGTGAGCAGTCT+CGG 0.521247 5_1:-17499606 Msa0721080:CDS
TCACCGACATCCTGGTCTGA+TGG 0.521468 5_1:+17496068 None:intergenic
AATAAGGTTGAAATGTCAGC+TGG 0.522417 5_1:-17499143 Msa0721080:CDS
CTTATGTTGAAGAGTACAGC+AGG 0.525002 5_1:+17495618 None:intergenic
CAGCAAAAGATGGATGCCTT+GGG 0.525901 5_1:-17499094 Msa0721080:CDS
AATGTTTGTAAATGCGGGAG+GGG 0.526382 5_1:-17500901 Msa0721080:CDS
ACATTGAGAACAATTTAGTC+GGG 0.528952 5_1:-17494345 Msa0721080:CDS
GACATTGAGAACAATTTAGT+CGG 0.530117 5_1:-17494346 Msa0721080:CDS
GAGATAAAACAAAATTATGA+AGG 0.533866 5_1:-17496847 Msa0721080:CDS
AACATAGTAGTCGATCTCAT+TGG 0.535582 5_1:-17496711 Msa0721080:intron
ATGTGTTACAAACCTTCTGT+TGG 0.538656 5_1:+17495284 None:intergenic
TGTGCAAGGAGAGCGACTTA+AGG 0.540942 5_1:-17496464 Msa0721080:CDS
TCAATGAAATCGCTTGGCAC+TGG 0.541901 5_1:+17500249 None:intergenic
ACATTTAAGTCACTCACTAC+AGG 0.542756 5_1:-17499920 Msa0721080:intron
CGTCATTAACTGAAATGAGT+AGG 0.544840 5_1:-17499979 Msa0721080:CDS
CTCAGCAGATGAGAAACAAA+AGG 0.546632 5_1:-17494384 Msa0721080:CDS
GCGACTAATGAAGGAGCTGA+TGG 0.551390 5_1:-17500876 Msa0721080:CDS
TTGGATATCTATGCAGCTGT+TGG 0.552000 5_1:-17500512 Msa0721080:CDS
ACACCTCTAACCTGTGATGA+AGG 0.552995 5_1:+17500195 None:intergenic
TTTGAGGTAGAGTATAATTG+TGG 0.553464 5_1:+17493951 None:intergenic
GATTTATCAGTCAGCTCGGG+TGG 0.554237 5_1:-17500766 Msa0721080:CDS
TAGACATACCTAGTGAGTCT+TGG 0.554882 5_1:+17496240 None:intergenic
CAAGATATTGTCCAGGAGGA+AGG 0.555315 5_1:+17500718 None:intergenic
TAATAATCTCAACAAAATGC+AGG 0.556051 5_1:+17500691 None:intergenic
GCTCTTCAATGAAGTTCAAG+AGG 0.556177 5_1:-17499330 Msa0721080:CDS
CATTTACTCCAAGACTCACT+AGG 0.556345 5_1:-17496248 Msa0721080:intron
CGTCGATTTATCAGTCAGCT+CGG 0.556612 5_1:-17500770 Msa0721080:CDS
CGACAATCAATCAGCTGTAG+TGG 0.559465 5_1:+17500479 None:intergenic
TGTGTAATGTTTGTAAATGC+GGG 0.560456 5_1:-17500906 Msa0721080:CDS
GAAGGAACAGAGCAAAATAG+AGG 0.560632 5_1:-17497165 Msa0721080:CDS
AATCAGAGACCTATTGGCTA+CGG 0.561642 5_1:-17497037 Msa0721080:CDS
ACTTTCTTCTAATTTCCTCA+AGG 0.562116 5_1:+17495807 None:intergenic
TATACACCAAAAGATGATCA+AGG 0.562132 5_1:-17499023 Msa0721080:intron
AGCTGAAAGATCAGTTGCAA+GGG 0.562482 5_1:-17495064 Msa0721080:CDS
GTGTGGACTGTACTGCAAGC+TGG 0.563345 5_1:-17496772 Msa0721080:CDS
CTAAAATTGTAAGAACTGGT+AGG 0.564054 5_1:-17494270 Msa0721080:CDS
TCATCCATCACAAGAAAAGG+TGG 0.567849 5_1:+17494049 None:intergenic
TGAGAGTAAGGCCAAGGGAA+AGG 0.567887 5_1:-17495773 Msa0721080:CDS
GTTTGTAAATGCGGGAGGGG+AGG 0.572631 5_1:-17500898 Msa0721080:CDS
ATCAGAGACCTATTGGCTAC+GGG 0.572963 5_1:-17497036 Msa0721080:CDS
AAACATTGAGAGTAAGGCCA+AGG 0.574522 5_1:-17495779 Msa0721080:CDS
TTGGAGATTCATCACTTGTG+CGG 0.575327 5_1:+17494497 None:intergenic
CAAAAGAATGCTATGAGGCA+TGG 0.577051 5_1:-17500003 Msa0721080:CDS
ACAAGCAGAGATCAGGCTCA+AGG 0.578572 5_1:-17494187 Msa0721080:CDS
GTCGATTTATCAGTCAGCTC+GGG 0.579050 5_1:-17500769 Msa0721080:CDS
TAAATGGGCCGAAAGGAATG+AGG 0.580606 5_1:-17500665 Msa0721080:CDS
CCAACAAGAAGATTCAGTAA+TGG 0.583365 5_1:-17501397 Msa0721080:CDS
GAAAGAGCAGGAGCAGAACT+CGG 0.583759 5_1:-17494882 Msa0721080:CDS
ACAAAGAGCGAGAGCAACAG+TGG 0.585453 5_1:-17494582 Msa0721080:CDS
ACGAATGAGGCGATAGTGGA+AGG 0.588795 5_1:-17500804 Msa0721080:CDS
ACAAATAAGTCCATCAGACC+AGG 0.589044 5_1:-17496078 Msa0721080:CDS
ACCTTGGCTTCTACAACACC+AGG 0.590292 5_1:+17496811 None:intergenic
AAGCTGAAAGATCAGTTGCA+AGG 0.592363 5_1:-17495065 Msa0721080:CDS
TGTTGAAGCCGTAAAGGTGG+CGG 0.594372 5_1:-17494542 Msa0721080:CDS
TGCAGATCCCACAAACAACT+GGG 0.594416 5_1:+17500399 None:intergenic
GTGTGTAATGTTTGTAAATG+CGG 0.597843 5_1:-17500907 Msa0721080:CDS
AGCTGGGTGTACAACAGTTG+TGG 0.598747 5_1:-17499126 Msa0721080:CDS
TGATTGTCGGGCCACTGTGA+AGG 0.604540 5_1:-17500465 Msa0721080:CDS
CAATTATGCGAAAAGTTGAA+GGG 0.606080 5_1:-17495652 Msa0721080:CDS
GGAACTTGACTAGTAATGAC+CGG 0.608114 5_1:+17494232 None:intergenic
ATTAATCAAAAGCATATCAA+CGG 0.608149 5_1:-17501570 Msa0721080:five_prime_UTR
AGGCTCAAGGAGTTAAAGAG+AGG 0.613323 5_1:-17494174 Msa0721080:CDS
GAAGGACATCATCATGTACC+TGG 0.614193 5_1:-17496829 Msa0721080:CDS
ATTAATGTAAATGGGCCGAA+AGG 0.614341 5_1:-17500672 Msa0721080:CDS
CATATCTGTTAGTGTGCTCG+AGG 0.615354 5_1:-17497073 Msa0721080:CDS
GGCTCAAGGAGTTAAAGAGA+GGG 0.615879 5_1:-17494173 Msa0721080:CDS
AGGTCAACAAGATATTGTCC+AGG 0.619450 5_1:+17500711 None:intergenic
AAAATCTTTCAGATTTGACA+GGG 0.625790 5_1:-17499048 Msa0721080:CDS
CTATCACGTAAAGTGGATGA+CGG 0.629410 5_1:+17494319 None:intergenic
ATGGCAGATGAAGGAACTAG+AGG 0.629546 5_1:-17494611 Msa0721080:intron
ATGGTAATCTCTGTGCTGGA+TGG 0.630703 5_1:-17497246 Msa0721080:CDS
AGCCAGTTGCCAAAATCCCA+AGG 0.632606 5_1:+17499078 None:intergenic
GCAAGGAGAGCGACTTAAGG+AGG 0.633067 5_1:-17496461 Msa0721080:CDS
ACTTCAAAAGACAAAAGCAA+TGG 0.638216 5_1:-17495964 Msa0721080:intron
CAAGGCAAAAGAATGCTATG+AGG 0.639933 5_1:-17500008 Msa0721080:CDS
GGCCACTGTGAAGGATGATG+GGG 0.640167 5_1:-17500456 Msa0721080:CDS
ACCTGGTGTTGTAGAAGCCA+AGG 0.641911 5_1:-17496812 Msa0721080:CDS
GTAAACCGCCAGATAAGTCA+AGG 0.643578 5_1:-17494436 Msa0721080:CDS
GAGCTGACTGATAAATCGAC+GGG 0.644570 5_1:+17500772 None:intergenic
CCACTATCGCCTCATTCGTG+CGG 0.646554 5_1:+17500808 None:intergenic
AGTCCATCAGACCAGGATGT+CGG 0.647343 5_1:-17496071 Msa0721080:CDS
CAGAACCTTGACTTATCTGG+CGG 0.648706 5_1:+17494431 None:intergenic
CGAGCTGACTGATAAATCGA+CGG 0.648723 5_1:+17500771 None:intergenic
TTATGTTGAAGCCGTAAAGG+TGG 0.649045 5_1:-17494545 Msa0721080:CDS
ATTTATCAGTCAGCTCGGGT+GGG 0.649156 5_1:-17500765 Msa0721080:CDS
CTTGCAAAGACTGATGTGCA+AGG 0.651119 5_1:-17496478 Msa0721080:CDS
AATGAGGCGATAGTGGAAGG+TGG 0.655012 5_1:-17500801 Msa0721080:CDS
AACATTGAGAGTAAGGCCAA+GGG 0.658460 5_1:-17495778 Msa0721080:CDS
TAATGTTTGTAAATGCGGGA+GGG 0.661653 5_1:-17500902 Msa0721080:CDS
TAGGCTAACAACGAAACCGC+CGG 0.662248 5_1:-17494251 Msa0721080:CDS
CCTTATTCAATGGTCGACAA+CGG 0.666998 5_1:+17499159 None:intergenic
AACAAGCATAGAATCGAACA+AGG 0.667491 5_1:+17501359 None:intergenic
GTAATGTTTGTAAATGCGGG+AGG 0.668947 5_1:-17500903 Msa0721080:CDS
AAATGGGCCGAAAGGAATGA+GGG 0.671060 5_1:-17500664 Msa0721080:CDS
TTGACAACATAAGTGACGTG+TGG 0.675867 5_1:-17496789 Msa0721080:CDS
AGATGACGAGAAAGTGTGAG+CGG 0.681526 5_1:+17501519 None:intergenic
TCAACAAGATATTGTCCAGG+AGG 0.688741 5_1:+17500714 None:intergenic
GAAGTAAAGAAGAATCCTTG+AGG 0.717866 5_1:-17495822 Msa0721080:CDS
ACTTGACTAGTAATGACCGG+CGG 0.732625 5_1:+17494235 None:intergenic
TGAAGGAATTTCAATCTGCG+CGG 0.734444 5_1:+17500212 None:intergenic
ATAAGGTTGAAATGTCAGCT+GGG 0.739136 5_1:-17499142 Msa0721080:CDS
TCACGTAAAGTGGATGACGG+TGG 0.739685 5_1:+17494322 None:intergenic
CACCCCATCATCCTTCACAG+TGG 0.762666 5_1:+17500454 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAAAACTCAATAT+CGG + chr5_1:17497801-17497820 None:intergenic 10.0%
!!! TGAGTTTTTTTTTATAATAA+TGG - chr5_1:17497805-17497824 Msa0721080:intron 10.0%
!!! TTTTTTATAATAATGGAAAA+AGG - chr5_1:17497812-17497831 Msa0721080:intron 10.0%
!! AATTATTTGACAAAAAATGT+TGG - chr5_1:17494162-17494181 Msa0721080:CDS 15.0%
!!! TTTTGATAAATTGTAAATCT+GGG - chr5_1:17494219-17494238 Msa0721080:CDS 15.0%
!! TTGAGATTATTAATGTAAAT+GGG - chr5_1:17494596-17494615 Msa0721080:CDS 15.0%
!! AAAGTATGAAAATAAGATAA+AGG - chr5_1:17495223-17495242 Msa0721080:intron 15.0%
!! TCAGTCTTAATTAATAAAAA+TGG + chr5_1:17495799-17495818 None:intergenic 15.0%
!!! TCTTTTTTTTTTTTTTGTCA+AGG + chr5_1:17496550-17496569 None:intergenic 15.0%
!!! AAATATAAGGTTTTTTTTAG+AGG - chr5_1:17496763-17496782 Msa0721080:CDS 15.0%
!!! TTTTAGAGGAAATAAATTTA+AGG - chr5_1:17496777-17496796 Msa0721080:CDS 15.0%
!!! ATAACTTGTTTTATATTTAC+AGG + chr5_1:17497030-17497049 None:intergenic 15.0%
!! AATATATTAAAAAATGTGCA+GGG + chr5_1:17497147-17497166 None:intergenic 15.0%
!! TAAATTACAATAAAGGATAA+AGG - chr5_1:17497580-17497599 Msa0721080:intron 15.0%
!! AAATTACAATAAAGGATAAA+GGG - chr5_1:17497581-17497600 Msa0721080:intron 15.0%
!! ATTATGATTATTTACACAAT+TGG - chr5_1:17497945-17497964 Msa0721080:intron 15.0%
!!! AAATTTAATACGTTTTAGTA+AGG + chr5_1:17499350-17499369 None:intergenic 15.0%
!!! TATACATTTTTTAGTAACAT+TGG - chr5_1:17499723-17499742 Msa0721080:intron 15.0%
!! TAGTTATAAATAAATAGCAT+TGG - chr5_1:17499848-17499867 Msa0721080:intron 15.0%
!! ATATTAATTAATAATTCACG+TGG - chr5_1:17500631-17500650 Msa0721080:intron 15.0%
!! TACCTCAAAAATTATAATAT+GGG - chr5_1:17501339-17501358 Msa0721080:CDS 15.0%
!! TTTATGTATTTACATAATTC+AGG - chr5_1:17501469-17501488 Msa0721080:exon 15.0%
!!! ACATTAATCATTTTTTGAAA+AGG - chr5_1:17501501-17501520 Msa0721080:five_prime_UTR 15.0%
!!! ATTAATCAAAAGCATATCAA+CGG - chr5_1:17493706-17493725 Msa0721080:intron 20.0%
!!! AGTTTTTTTTAACTGTGATT+GGG + chr5_1:17494099-17494118 None:intergenic 20.0%
!!! AAGTTTTTTTTAACTGTGAT+TGG + chr5_1:17494100-17494119 None:intergenic 20.0%
!!! AAAATGTTGGTAAGTAAATT+AGG - chr5_1:17494175-17494194 Msa0721080:CDS 20.0%
!!! AAATGTTGGTAAGTAAATTA+GGG - chr5_1:17494176-17494195 Msa0721080:CDS 20.0%
!!! GGGTTTTAAAATTATTGTTT+AGG - chr5_1:17494196-17494215 Msa0721080:CDS 20.0%
!!! GTTTTGATAAATTGTAAATC+TGG - chr5_1:17494218-17494237 Msa0721080:CDS 20.0%
!! GTTGAGATTATTAATGTAAA+TGG - chr5_1:17494595-17494614 Msa0721080:CDS 20.0%
!! TTTAATTGTAATAATATGGC+TGG - chr5_1:17494726-17494745 Msa0721080:intron 20.0%
!! ATAAGATTTGAGAGTTTAAA+TGG - chr5_1:17494851-17494870 Msa0721080:intron 20.0%
!!! TTGTTTTTCCTGATTTTAAT+TGG - chr5_1:17495161-17495180 Msa0721080:intron 20.0%
!!! AAACCATCTTATTTAATTCA+GGG + chr5_1:17495731-17495750 None:intergenic 20.0%
!!! TAAACCATCTTATTTAATTC+AGG + chr5_1:17495732-17495751 None:intergenic 20.0%
!!! AAATCTGAAAGATTTTTTAG+AGG + chr5_1:17496224-17496243 None:intergenic 20.0%
!!! ATTTTGCTCAATTAATTATC+AGG + chr5_1:17496408-17496427 None:intergenic 20.0%
!!! AGGATTGAATATTTTAGTTT+GGG + chr5_1:17496667-17496686 None:intergenic 20.0%
!!! AAGGATTGAATATTTTAGTT+TGG + chr5_1:17496668-17496687 None:intergenic 20.0%
!!! TGGAATGTCTTAATTTTATA+GGG + chr5_1:17496822-17496841 None:intergenic 20.0%
!!! ATGGAATGTCTTAATTTTAT+AGG + chr5_1:17496823-17496842 None:intergenic 20.0%
!!! ACACCTATTTTTTTAAAACA+GGG + chr5_1:17496853-17496872 None:intergenic 20.0%
!!! AACACCTATTTTTTTAAAAC+AGG + chr5_1:17496854-17496873 None:intergenic 20.0%
!! TCTTGAAATATTCATTTCTT+AGG - chr5_1:17496879-17496898 Msa0721080:intron 20.0%
!! TGATAACAAGATGAAAATAA+TGG + chr5_1:17497102-17497121 None:intergenic 20.0%
!! ATATATTAAAAAATGTGCAG+GGG + chr5_1:17497146-17497165 None:intergenic 20.0%
!! GAATATATTAAAAAATGTGC+AGG + chr5_1:17497148-17497167 None:intergenic 20.0%
!! AAGAAAATGAATATGCAAAA+TGG - chr5_1:17497174-17497193 Msa0721080:CDS 20.0%
!!! AACCTTTTAAAACCATATAT+AGG - chr5_1:17497330-17497349 Msa0721080:intron 20.0%
!!! ATTATATTTTGGCCTATATA+TGG + chr5_1:17497345-17497364 None:intergenic 20.0%
!!! AACACCTTTGTATTATATTT+TGG + chr5_1:17497356-17497375 None:intergenic 20.0%
!!! ATTCTCTGATTTAATTTCTT+TGG + chr5_1:17497380-17497399 None:intergenic 20.0%
!!! ACATAGGACATAATATATTT+TGG + chr5_1:17497561-17497580 None:intergenic 20.0%
!! TCCTATGTAAATTACAATAA+AGG - chr5_1:17497573-17497592 Msa0721080:intron 20.0%
!! TCCTTTATTGTAATTTACAT+AGG + chr5_1:17497577-17497596 None:intergenic 20.0%
!!! TATAATAATGGAAAAAGGAT+AGG - chr5_1:17497817-17497836 Msa0721080:intron 20.0%
!! AATGTGATTAGATTTGTAAA+AGG - chr5_1:17497856-17497875 Msa0721080:intron 20.0%
!! ACTAGTTAACTATGAAAATA+TGG - chr5_1:17498367-17498386 Msa0721080:intron 20.0%
!!! GTTGTATTGAAATTGTTATT+AGG - chr5_1:17498403-17498422 Msa0721080:intron 20.0%
!!! TATTGAAATTGTTATTAGGT+TGG - chr5_1:17498407-17498426 Msa0721080:intron 20.0%
!! GAGATAAAACAAAATTATGA+AGG - chr5_1:17498429-17498448 Msa0721080:intron 20.0%
!! CTAGAAATTGTAAAGAAATA+GGG + chr5_1:17498610-17498629 None:intergenic 20.0%
!! ACTAGAAATTGTAAAGAAAT+AGG + chr5_1:17498611-17498630 None:intergenic 20.0%
!! AAGACTAAAAATTTGATGAA+TGG - chr5_1:17498723-17498742 Msa0721080:intron 20.0%
!! AATTAATAGGTATACCTATA+CGG + chr5_1:17498915-17498934 None:intergenic 20.0%
!! TAACATTTACATATCAAGAT+TGG + chr5_1:17498954-17498973 None:intergenic 20.0%
!! TTCATCATAAATTGTTCATA+TGG + chr5_1:17499384-17499403 None:intergenic 20.0%
!!! AATTTTTACCATTTTCTATC+TGG - chr5_1:17500583-17500602 Msa0721080:intron 20.0%
!! CTACCTCAAAAATTATAATA+TGG - chr5_1:17501338-17501357 Msa0721080:CDS 20.0%
! GAGTAAAAAGCAAAGTTAAA+CGG - chr5_1:17493680-17493699 Msa0721080:intron 25.0%
!!! GTTGATATGCTTTTGATTAA+TGG + chr5_1:17493707-17493726 None:intergenic 25.0%
! CTATCAAACGAATTTCAAAA+TGG - chr5_1:17493804-17493823 Msa0721080:intron 25.0%
! AGTTCAAAACTCATTCAAAA+TGG - chr5_1:17493946-17493965 Msa0721080:three_prime_UTR 25.0%
!!! AAAAAACTTGCTTTTCAATC+TGG - chr5_1:17494111-17494130 Msa0721080:three_prime_UTR 25.0%
!!! AAAAACTTGCTTTTCAATCT+GGG - chr5_1:17494112-17494131 Msa0721080:three_prime_UTR 25.0%
! AATATTCCAAGAATTACGAA+AGG - chr5_1:17494271-17494290 Msa0721080:CDS 25.0%
!!! ATGTATATATTTTGAAGCAG+AGG - chr5_1:17494345-17494364 Msa0721080:CDS 25.0%
! TAATAATCTCAACAAAATGC+AGG + chr5_1:17494588-17494607 None:intergenic 25.0%
! TGTTTACATACAAGAAGAAA+AGG - chr5_1:17494642-17494661 Msa0721080:intron 25.0%
! GAAAGATTCCAATTAAAATC+AGG + chr5_1:17495172-17495191 None:intergenic 25.0%
! ATGAACTTGATAAGAAGAAA+TGG - chr5_1:17495510-17495529 Msa0721080:intron 25.0%
! TGAACTTGATAAGAAGAAAT+GGG - chr5_1:17495511-17495530 Msa0721080:intron 25.0%
! AATCCCTGAATTAAATAAGA+TGG - chr5_1:17495725-17495744 Msa0721080:CDS 25.0%
! AAAAATCTTTCAGATTTGAC+AGG - chr5_1:17496227-17496246 Msa0721080:intron 25.0%
! AAAATCTTTCAGATTTGACA+GGG - chr5_1:17496228-17496247 Msa0721080:intron 25.0%
! ATTATTGTCATATTAGTTCG+CGG - chr5_1:17496326-17496345 Msa0721080:intron 25.0%
! TAATAGTATTTAACCGAAGT+TGG - chr5_1:17496470-17496489 Msa0721080:CDS 25.0%
! ATAGCACAAGAAACAATAAT+TGG - chr5_1:17496514-17496533 Msa0721080:CDS 25.0%
! TTCATCTGTTGTTAAATTGA+TGG + chr5_1:17496581-17496600 None:intergenic 25.0%
! AAATAATGCTATCTAAACTG+AGG - chr5_1:17496599-17496618 Msa0721080:intron 25.0%
!!! AGTCCCTGTTTTAAAAAAAT+AGG - chr5_1:17496847-17496866 Msa0721080:CDS 25.0%
!! TTTTAAATAGTTACTACACG+TGG - chr5_1:17496968-17496987 Msa0721080:intron 25.0%
! TATATTAAAAAATGTGCAGG+GGG + chr5_1:17497145-17497164 None:intergenic 25.0%
!! GCATATTCATTTTCTTCTAA+TGG + chr5_1:17497170-17497189 None:intergenic 25.0%
! TAGGCCAAAATATAATACAA+AGG - chr5_1:17497349-17497368 Msa0721080:intron 25.0%
! ATCAGAGAATTCTAATGTAA+AGG - chr5_1:17497390-17497409 Msa0721080:intron 25.0%
! TCAGAGAATTCTAATGTAAA+GGG - chr5_1:17497391-17497410 Msa0721080:intron 25.0%
!!! CAAATTCATTTCTGTTTTGA+TGG + chr5_1:17497437-17497456 None:intergenic 25.0%
! TTCCTTCAAATTCAATCTTA+TGG + chr5_1:17497626-17497645 None:intergenic 25.0%
! TAAGATTGAATTTGAAGGAA+TGG - chr5_1:17497626-17497645 Msa0721080:intron 25.0%
! CCTTATCTTCTTATAAACAA+AGG + chr5_1:17497672-17497691 None:intergenic 25.0%
!! CCTTTGTTTATAAGAAGATA+AGG - chr5_1:17497669-17497688 Msa0721080:intron 25.0%
! GTTTATAAGAAGATAAGGAA+TGG - chr5_1:17497674-17497693 Msa0721080:intron 25.0%
!!! AAGTTTTCTAAAAACAGTGT+TGG - chr5_1:17497968-17497987 Msa0721080:intron 25.0%
! AACAGGAAAAACATTTACTA+TGG - chr5_1:17498089-17498108 Msa0721080:intron 25.0%
!! AAAATAGAGGTGTAAATTAC+AGG - chr5_1:17498124-17498143 Msa0721080:intron 25.0%
! ATATTTCATTTGTGACAGTT+TGG - chr5_1:17498303-17498322 Msa0721080:intron 25.0%
! TAGTATTTCACATTCTAGTA+TGG + chr5_1:17498348-17498367 None:intergenic 25.0%
! CAGTAAAGAGAGTAATTAAT+AGG + chr5_1:17498928-17498947 None:intergenic 25.0%
!!! TCAATGCTATTTTTTTTGTG+TGG - chr5_1:17498980-17498999 Msa0721080:intron 25.0%
!!! TTTTTTTGTGTGGATATTTC+AGG - chr5_1:17498990-17499009 Msa0721080:intron 25.0%
!!! GTATGTGTTGTTTATATGTT+AGG - chr5_1:17499077-17499096 Msa0721080:CDS 25.0%
!! TCTTTTCTTGTAGATTTTTG+TGG + chr5_1:17499536-17499555 None:intergenic 25.0%
! GAAAAGATTAAAGAACTTGA+AGG - chr5_1:17499549-17499568 Msa0721080:CDS 25.0%
! CAAGATTATTATTTGACATG+TGG - chr5_1:17499694-17499713 Msa0721080:intron 25.0%
! AATAAAGAATTAGAGAAGAG+TGG + chr5_1:17500035-17500054 None:intergenic 25.0%
! CAATCATAAGATGCATATAT+TGG - chr5_1:17500084-17500103 Msa0721080:CDS 25.0%
! TTTGACTGAAACAATTAGTT+TGG - chr5_1:17500128-17500147 Msa0721080:intron 25.0%
!! ATCTTCCTTTCTAAAAGATA+AGG - chr5_1:17500246-17500265 Msa0721080:CDS 25.0%
! GCTTCATATTATTTAGATCA+AGG - chr5_1:17500355-17500374 Msa0721080:intron 25.0%
!! CATTTTATGTAGTTCAAACT+CGG - chr5_1:17500818-17500837 Msa0721080:CDS 25.0%
! AGTGATTATGTCATATTGAA+TGG - chr5_1:17501302-17501321 Msa0721080:intron 25.0%
!! CACCCATATTATAATTTTTG+AGG + chr5_1:17501344-17501363 None:intergenic 25.0%
! CTCAAAAATTATAATATGGG+TGG - chr5_1:17501342-17501361 Msa0721080:CDS 25.0%
!! TTTAGAGTGGTCAAAATATA+GGG + chr5_1:17501425-17501444 None:intergenic 25.0%
!! ATTATTTAGTCACTTTAGAG+TGG + chr5_1:17501438-17501457 None:intergenic 25.0%
! AATTTCGTTGTTATCAAAAG+AGG - chr5_1:17501529-17501548 Msa0721080:five_prime_UTR 25.0%
TGAAATTCGTTGGATTGAAT+CGG + chr5_1:17493832-17493851 None:intergenic 30.0%
TTAAGTCCTTTCGTAATTCT+TGG + chr5_1:17494280-17494299 None:intergenic 30.0%
GTGTGTAATGTTTGTAAATG+CGG - chr5_1:17494369-17494388 Msa0721080:CDS 30.0%
TGTGTAATGTTTGTAAATGC+GGG - chr5_1:17494370-17494389 Msa0721080:CDS 30.0%
! TGCTTGATTAATTTTTCCAG+TGG - chr5_1:17494948-17494967 Msa0721080:intron 30.0%
!! CAGCAATTTGTTATTGTCTA+CGG - chr5_1:17494984-17495003 Msa0721080:intron 30.0%
TTACATTCAATGAAATCGCT+TGG + chr5_1:17495036-17495055 None:intergenic 30.0%
! TGAAGTGTCAAGTATATCAT+AGG - chr5_1:17495127-17495146 Msa0721080:intron 30.0%
AACTGAAATGAGTAGGAAAA+TGG - chr5_1:17495304-17495323 Msa0721080:CDS 30.0%
TCTATATGTTTCTTGATCGA+AGG + chr5_1:17495392-17495411 None:intergenic 30.0%
AGAAGCAATTATCAGTTTAC+AGG - chr5_1:17495535-17495554 Msa0721080:intron 30.0%
AGTAGTTTGAATCGTGTTAA+AGG - chr5_1:17495845-17495864 Msa0721080:CDS 30.0%
GTAGTTTGAATCGTGTTAAA+GGG - chr5_1:17495846-17495865 Msa0721080:CDS 30.0%
GACATTTCAACCTTATTCAA+TGG + chr5_1:17496130-17496149 None:intergenic 30.0%
TATACACCAAAAGATGATCA+AGG - chr5_1:17496253-17496272 Msa0721080:CDS 30.0%
ATCACTAATTAGCATAGTCA+AGG + chr5_1:17496687-17496706 None:intergenic 30.0%
TTGACTATGCTAATTAGTGA+TGG - chr5_1:17496686-17496705 Msa0721080:intron 30.0%
! TTTAAAACAGGGACTAAACA+TGG + chr5_1:17496842-17496861 None:intergenic 30.0%
ACATTCATTTCAAGCACTAT+TGG + chr5_1:17496928-17496947 None:intergenic 30.0%
AATAGTGCTTGAAATGAATG+TGG - chr5_1:17496927-17496946 Msa0721080:intron 30.0%
TTCAAAAACTCAAGTCACAA+GGG + chr5_1:17497073-17497092 None:intergenic 30.0%
ATTCAAAAACTCAAGTCACA+AGG + chr5_1:17497074-17497093 None:intergenic 30.0%
ATATTAAAAAATGTGCAGGG+GGG + chr5_1:17497144-17497163 None:intergenic 30.0%
!!! GGCCTATATATGGTTTTAAA+AGG + chr5_1:17497335-17497354 None:intergenic 30.0%
!!! TCATTTCTGTTTTGATGGAA+AGG + chr5_1:17497432-17497451 None:intergenic 30.0%
ATGTTTGTAACTGTGTTGTA+TGG - chr5_1:17497499-17497518 Msa0721080:intron 30.0%
TGTGTTGTATGGTTGTTAAA+TGG - chr5_1:17497510-17497529 Msa0721080:intron 30.0%
GTGTTGTATGGTTGTTAAAT+GGG - chr5_1:17497511-17497530 Msa0721080:intron 30.0%
CTCCATAAGATTGAATTTGA+AGG - chr5_1:17497621-17497640 Msa0721080:intron 30.0%
! AGAAACCCTTCTTCTAAAAA+AGG - chr5_1:17497699-17497718 Msa0721080:intron 30.0%
!!! CCATTCCTTTTTTAGAAGAA+GGG + chr5_1:17497707-17497726 None:intergenic 30.0%
!!! TCCATTCCTTTTTTAGAAGA+AGG + chr5_1:17497708-17497727 None:intergenic 30.0%
TCTACAACAACAATTCCATT+CGG + chr5_1:17497737-17497756 None:intergenic 30.0%
GGAAAAACATTTACTATGGA+AGG - chr5_1:17498093-17498112 Msa0721080:intron 30.0%
! GCATTTGTTTAGAGTTAGTA+AGG - chr5_1:17498155-17498174 Msa0721080:intron 30.0%
! TGTTTAGAGTTAGTAAGGAA+AGG - chr5_1:17498160-17498179 Msa0721080:intron 30.0%
ATCAATGACAAACTCAACAA+AGG + chr5_1:17498285-17498304 None:intergenic 30.0%
CAATGTAATCCTACAAAAAC+TGG + chr5_1:17499111-17499130 None:intergenic 30.0%
! CAGTTTTTGTAGGATTACAT+TGG - chr5_1:17499109-17499128 Msa0721080:CDS 30.0%
GTATGTTTGTATCATATTGC+AGG - chr5_1:17499148-17499167 Msa0721080:CDS 30.0%
! TTAATTTTGCAACTAGAGTG+AGG - chr5_1:17499245-17499264 Msa0721080:intron 30.0%
! TAATTTTGCAACTAGAGTGA+GGG - chr5_1:17499246-17499265 Msa0721080:intron 30.0%
! GTATCAATTTGCTTCTTAAC+AGG + chr5_1:17499286-17499305 None:intergenic 30.0%
GTTAAGAAGCAAATTGATAC+AGG - chr5_1:17499286-17499305 Msa0721080:intron 30.0%
ACTTCAAAAGACAAAAGCAA+TGG - chr5_1:17499312-17499331 Msa0721080:intron 30.0%
TAAATTGTTCATATGGCATG+AGG + chr5_1:17499377-17499396 None:intergenic 30.0%
GAATTCTTCCTTATACACTT+TGG - chr5_1:17499401-17499420 Msa0721080:intron 30.0%
ACTTTCTTCTAATTTCCTCA+AGG + chr5_1:17499472-17499491 None:intergenic 30.0%
TTTGCAAAACATTGAGAGTA+AGG - chr5_1:17499491-17499510 Msa0721080:intron 30.0%
TCAATTATGCGAAAAGTTGA+AGG - chr5_1:17499623-17499642 Msa0721080:intron 30.0%
CAATTATGCGAAAAGTTGAA+GGG - chr5_1:17499624-17499643 Msa0721080:intron 30.0%
TTGTTTCAGTCAAACAAAGA+AGG + chr5_1:17500122-17500141 None:intergenic 30.0%
TTGTATGTTATTGCAGGTTT+GGG - chr5_1:17500177-17500196 Msa0721080:intron 30.0%
!! GACAACCTTATCTTTTAGAA+AGG + chr5_1:17500254-17500273 None:intergenic 30.0%
ATATTCTTTGCCGTTGTTAT+GGG - chr5_1:17500301-17500320 Msa0721080:intron 30.0%
CTCAAAATATCCCATAACAA+CGG + chr5_1:17500314-17500333 None:intergenic 30.0%
! TAGTACTCCTTTTCAATGTA+TGG + chr5_1:17500558-17500577 None:intergenic 30.0%
! AAGGTTCTGCTTTGTTAAAA+GGG - chr5_1:17500859-17500878 Msa0721080:CDS 30.0%
GACATTGAGAACAATTTAGT+CGG - chr5_1:17500930-17500949 Msa0721080:intron 30.0%
ACATTGAGAACAATTTAGTC+GGG - chr5_1:17500931-17500950 Msa0721080:intron 30.0%
! CATTTTTCTATCACGTAAAG+TGG + chr5_1:17500967-17500986 None:intergenic 30.0%
! CTACCAGTTCTTACAATTTT+AGG + chr5_1:17501008-17501027 None:intergenic 30.0%
CTAAAATTGTAAGAACTGGT+AGG - chr5_1:17501006-17501025 Msa0721080:intron 30.0%
GGGATAGTAAGAAAAAGATA+TGG - chr5_1:17501123-17501142 Msa0721080:intron 30.0%
GAAAAAGATATGGTCAAGAT+AGG - chr5_1:17501133-17501152 Msa0721080:intron 30.0%
! TTTTCATCCATCACAAGAAA+AGG + chr5_1:17501233-17501252 None:intergenic 30.0%
! TTTGAGGTAGAGTATAATTG+TGG + chr5_1:17501328-17501347 None:intergenic 30.0%
AAAATATAGGGAATAGATGG+AGG + chr5_1:17501413-17501432 None:intergenic 30.0%
GTCAAAATATAGGGAATAGA+TGG + chr5_1:17501416-17501435 None:intergenic 30.0%
!! CTTTAGAGTGGTCAAAATAT+AGG + chr5_1:17501426-17501445 None:intergenic 30.0%
!! TTCTTGTTGGTTTGGGATTA+GGG + chr5_1:17493869-17493888 None:intergenic 35.0%
!! CTGAATCTTCTTGTTGGTTT+GGG + chr5_1:17493876-17493895 None:intergenic 35.0%
! ACTGAATCTTCTTGTTGGTT+TGG + chr5_1:17493877-17493896 None:intergenic 35.0%
CCATTACTGAATCTTCTTGT+TGG + chr5_1:17493882-17493901 None:intergenic 35.0%
CCAACAAGAAGATTCAGTAA+TGG - chr5_1:17493879-17493898 Msa0721080:intron 35.0%
AACAAGCATAGAATCGAACA+AGG + chr5_1:17493920-17493939 None:intergenic 35.0%
TTCACCAGATCTCAAAATTC+AGG - chr5_1:17493970-17493989 Msa0721080:three_prime_UTR 35.0%
!!! CTAACCTGAATTTTGAGATC+TGG + chr5_1:17493977-17493996 None:intergenic 35.0%
GGAATTGTACTTAGAAAGAG+GGG + chr5_1:17494078-17494097 None:intergenic 35.0%
GGGAATTGTACTTAGAAAGA+GGG + chr5_1:17494079-17494098 None:intergenic 35.0%
TGGGAATTGTACTTAGAAAG+AGG + chr5_1:17494080-17494099 None:intergenic 35.0%
TAATGTTTGTAAATGCGGGA+GGG - chr5_1:17494374-17494393 Msa0721080:CDS 35.0%
!!! CTGAGTGACACTTTTTTTGA+CGG - chr5_1:17494433-17494452 Msa0721080:CDS 35.0%
ATTAATGTAAATGGGCCGAA+AGG - chr5_1:17494604-17494623 Msa0721080:CDS 35.0%
ATTGTAATAATATGGCTGGC+AGG - chr5_1:17494730-17494749 Msa0721080:intron 35.0%
GATTGAAATTCCTTCATCAC+AGG - chr5_1:17495071-17495090 Msa0721080:CDS 35.0%
CGTCATTAACTGAAATGAGT+AGG - chr5_1:17495297-17495316 Msa0721080:CDS 35.0%
GAAAATGGAAAAAGTCCAGA+TGG - chr5_1:17495319-17495338 Msa0721080:CDS 35.0%
ACATTTAAGTCACTCACTAC+AGG - chr5_1:17495356-17495375 Msa0721080:intron 35.0%
CACATTAATCTAGCTGAGAA+AGG + chr5_1:17495430-17495449 None:intergenic 35.0%
ATCTGTTAGAAATACTCCTC+AGG + chr5_1:17495490-17495509 None:intergenic 35.0%
! CAGTTTACAGGAAAAAGTAC+AGG - chr5_1:17495547-17495566 Msa0721080:intron 35.0%
AACACATTCATGTGCTTCAA+AGG + chr5_1:17495700-17495719 None:intergenic 35.0%
TAAGATGGTTTATGCAGTAC+AGG - chr5_1:17495740-17495759 Msa0721080:CDS 35.0%
AATGAAGTTCAAGAGGCTAA+AGG - chr5_1:17495953-17495972 Msa0721080:intron 35.0%
TGCTTCTGTTATGAATACAC+AGG - chr5_1:17496076-17496095 Msa0721080:CDS 35.0%
AATAAGGTTGAAATGTCAGC+TGG - chr5_1:17496133-17496152 Msa0721080:intron 35.0%
ATAAGGTTGAAATGTCAGCT+GGG - chr5_1:17496134-17496153 Msa0721080:intron 35.0%
!! GATTTTGATGCAGCAAAAGA+TGG - chr5_1:17496172-17496191 Msa0721080:intron 35.0%
! CACATACCTTGATCATCTTT+TGG + chr5_1:17496262-17496281 None:intergenic 35.0%
! TGATATGTCAAGTACTGCTA+TGG + chr5_1:17496712-17496731 None:intergenic 35.0%
CACCTATTTGGAGGATTAAT+AGG + chr5_1:17496905-17496924 None:intergenic 35.0%
AAATAGTTACTACACGTGGA+AGG - chr5_1:17496972-17496991 Msa0721080:intron 35.0%
! CTTTTCATCCTACAAAGCTT+AGG + chr5_1:17496998-17497017 None:intergenic 35.0%
ATGGTTACAATGATGCATAG+AGG - chr5_1:17497193-17497212 Msa0721080:CDS 35.0%
ATGAGATGAGAAGAATGATG+TGG - chr5_1:17497240-17497259 Msa0721080:CDS 35.0%
ACACAGTTACAAACATGTTC+AGG + chr5_1:17497495-17497514 None:intergenic 35.0%
TTTGAAGGAATGGAGAAATG+AGG - chr5_1:17497636-17497655 Msa0721080:intron 35.0%
! CCCTTCTTCTAAAAAAGGAA+TGG - chr5_1:17497704-17497723 Msa0721080:intron 35.0%
! ACTCAATATCGGTTACTGAA+CGG + chr5_1:17497790-17497809 None:intergenic 35.0%
! TTTTGCTGATGCATCATCAA+TGG - chr5_1:17498011-17498030 Msa0721080:intron 35.0%
AACGTTTGCATCTTTGCTTA+TGG - chr5_1:17498057-17498076 Msa0721080:intron 35.0%
ATCTTTGCTTATGGACAAAC+AGG - chr5_1:17498066-17498085 Msa0721080:intron 35.0%
TGAACAAATCAGAGACCTAT+TGG - chr5_1:17498233-17498252 Msa0721080:intron 35.0%
! AAAGGTTACCTTTTTGATGC+TGG + chr5_1:17498267-17498286 None:intergenic 35.0%
AACATAGTAGTCGATCTCAT+TGG - chr5_1:17498565-17498584 Msa0721080:intron 35.0%
ATAGGGAAAATGCATTAGCT+TGG + chr5_1:17498593-17498612 None:intergenic 35.0%
GTTCAGCATGCTATGTATAA+TGG - chr5_1:17498698-17498717 Msa0721080:intron 35.0%
! ATACGGAATGTGACTACTTT+TGG + chr5_1:17498898-17498917 None:intergenic 35.0%
AAAGTAGTCACATTCCGTAT+AGG - chr5_1:17498898-17498917 Msa0721080:intron 35.0%
AACAACACATACAGAGAAAG+CGG + chr5_1:17499069-17499088 None:intergenic 35.0%
! GAGTAAGATCCAGTTTTTGT+AGG - chr5_1:17499099-17499118 Msa0721080:CDS 35.0%
TGTTTGTATCATATTGCAGG+AGG - chr5_1:17499151-17499170 Msa0721080:CDS 35.0%
! AATTTTGCAACTAGAGTGAG+GGG - chr5_1:17499247-17499266 Msa0721080:intron 35.0%
CAAAAGACAAAAGCAATGGT+AGG - chr5_1:17499316-17499335 Msa0721080:intron 35.0%
AAGCTATGCCAAAGTGTATA+AGG + chr5_1:17499412-17499431 None:intergenic 35.0%
GAAGTAAAGAAGAATCCTTG+AGG - chr5_1:17499454-17499473 Msa0721080:intron 35.0%
!!! TTTCTCTGATTGGTTTTGCA+TGG + chr5_1:17499595-17499614 None:intergenic 35.0%
! GAGAAACTTGTTTCTCTGAT+TGG + chr5_1:17499605-17499624 None:intergenic 35.0%
! GTAACATTGGTTGTGTATCA+TGG - chr5_1:17499736-17499755 Msa0721080:CDS 35.0%
! TTGGTTGTGTATCATGGTTT+TGG - chr5_1:17499742-17499761 Msa0721080:CDS 35.0%
AAGACACATGCTTATACTGA+AGG - chr5_1:17499914-17499933 Msa0721080:intron 35.0%
ATGTGTTACAAACCTTCTGT+TGG + chr5_1:17499995-17500014 None:intergenic 35.0%
AAAGAATTAGAGAAGAGTGG+AGG + chr5_1:17500032-17500051 None:intergenic 35.0%
! TGTTCTTCATGCTAAGGTTT+TGG + chr5_1:17500062-17500081 None:intergenic 35.0%
ATTGCATGTTCTTCATGCTA+AGG + chr5_1:17500068-17500087 None:intergenic 35.0%
CAGTTCTTGTATGTTATTGC+AGG - chr5_1:17500171-17500190 Msa0721080:intron 35.0%
CTTGTATGTTATTGCAGGTT+TGG - chr5_1:17500176-17500195 Msa0721080:intron 35.0%
GATATTCTTTGCCGTTGTTA+TGG - chr5_1:17500300-17500319 Msa0721080:intron 35.0%
GAAGCGATGAACATAAAAAG+AGG + chr5_1:17500340-17500359 None:intergenic 35.0%
!!! TAGTACCTGTTGTTTTAGCA+AGG + chr5_1:17500423-17500442 None:intergenic 35.0%
! ACTCCTTTTCAATGTATGGA+GGG + chr5_1:17500554-17500573 None:intergenic 35.0%
! TACTCCTTTTCAATGTATGG+AGG + chr5_1:17500555-17500574 None:intergenic 35.0%
CAAAGATGCCAGATAGAAAA+TGG + chr5_1:17500594-17500613 None:intergenic 35.0%
ATGCGACTCTCAATATCATT+TGG + chr5_1:17500801-17500820 None:intergenic 35.0%
! CAAGGTTCTGCTTTGTTAAA+AGG - chr5_1:17500858-17500877 Msa0721080:CDS 35.0%
TACGTGATAGAAAAATGACG+AGG - chr5_1:17500970-17500989 Msa0721080:intron 35.0%
! CCAGTTCTTACAATTTTAGG+CGG + chr5_1:17501005-17501024 None:intergenic 35.0%
! CTAGCTCTCTTATGAGATAA+AGG + chr5_1:17501068-17501087 None:intergenic 35.0%
GTAACAACAGTTGCTGATAT+TGG - chr5_1:17501171-17501190 Msa0721080:intron 35.0%
TGGGTCATTGTGAAATTCGT+TGG + chr5_1:17493842-17493861 None:intergenic 40.0%
!! CTTCTTGTTGGTTTGGGATT+AGG + chr5_1:17493870-17493889 None:intergenic 40.0%
GTAATGTTTGTAAATGCGGG+AGG - chr5_1:17494373-17494392 Msa0721080:CDS 40.0%
AATGTTTGTAAATGCGGGAG+GGG - chr5_1:17494375-17494394 Msa0721080:CDS 40.0%
!!! AGTGACACTTTTTTTGACGG+TGG - chr5_1:17494436-17494455 Msa0721080:CDS 40.0%
! AGAATTGATAACCTTCCTCC+TGG - chr5_1:17494547-17494566 Msa0721080:CDS 40.0%
TCAACAAGATATTGTCCAGG+AGG + chr5_1:17494565-17494584 None:intergenic 40.0%
AGGTCAACAAGATATTGTCC+AGG + chr5_1:17494568-17494587 None:intergenic 40.0%
TTGAACACCCTCATTCCTTT+CGG + chr5_1:17494622-17494641 None:intergenic 40.0%
TTGGATATCTATGCAGCTGT+TGG - chr5_1:17494764-17494783 Msa0721080:intron 40.0%
CACTACAGCTGATTGATTGT+CGG - chr5_1:17494798-17494817 Msa0721080:intron 40.0%
ACTACAGCTGATTGATTGTC+GGG - chr5_1:17494799-17494818 Msa0721080:intron 40.0%
TTGTTTGTGGGATCTGCATT+AGG - chr5_1:17494882-17494901 Msa0721080:CDS 40.0%
CTGAGTAACTTCAATACCAC+TGG + chr5_1:17494967-17494986 None:intergenic 40.0%
TGAAGGAATTTCAATCTGCG+CGG + chr5_1:17495067-17495086 None:intergenic 40.0%
ATTCCTTCATCACAGGTTAG+AGG - chr5_1:17495078-17495097 Msa0721080:CDS 40.0%
GGTGTACACTACTTGATATG+TGG - chr5_1:17495099-17495118 Msa0721080:intron 40.0%
CAAGGCAAAAGAATGCTATG+AGG - chr5_1:17495268-17495287 Msa0721080:intron 40.0%
CAAAAGAATGCTATGAGGCA+TGG - chr5_1:17495273-17495292 Msa0721080:intron 40.0%
!! CAGGTTCTCAGCTTGTTTTT+CGG + chr5_1:17495471-17495490 None:intergenic 40.0%
AAAAACAAGCTGAGAACCTG+AGG - chr5_1:17495471-17495490 Msa0721080:intron 40.0%
GTTTATGCAGTACAGGAGTT+GGG - chr5_1:17495747-17495766 Msa0721080:CDS 40.0%
GCTCTTCAATGAAGTTCAAG+AGG - chr5_1:17495946-17495965 Msa0721080:intron 40.0%
CCTTATTCAATGGTCGACAA+CGG + chr5_1:17496120-17496139 None:intergenic 40.0%
GAAGGATAGGGAAAAGAGTT+GGG - chr5_1:17496630-17496649 Msa0721080:intron 40.0%
GGCCTATTAATCCTCCAAAT+AGG - chr5_1:17496900-17496919 Msa0721080:intron 40.0%
AAGCACTATTGGCACCTATT+TGG + chr5_1:17496917-17496936 None:intergenic 40.0%
AGTGCTTGAAATGAATGTGG+AGG - chr5_1:17496930-17496949 Msa0721080:intron 40.0%
AAACGACGATGATGACTCAT+TGG + chr5_1:17497472-17497491 None:intergenic 40.0%
! AATATCGGTTACTGAACGGA+AGG + chr5_1:17497786-17497805 None:intergenic 40.0%
ATCAATGGTAATCTCTGTGC+TGG - chr5_1:17498026-17498045 Msa0721080:intron 40.0%
GAAGGAACAGAGCAAAATAG+AGG - chr5_1:17498111-17498130 Msa0721080:intron 40.0%
! AATCAGAGACCTATTGGCTA+CGG - chr5_1:17498239-17498258 Msa0721080:intron 40.0%
GTCACTTATGTTGTCAACCT+TGG + chr5_1:17498484-17498503 None:intergenic 40.0%
TTGACAACATAAGTGACGTG+TGG - chr5_1:17498487-17498506 Msa0721080:intron 40.0%
AATCGTTCTCTTTCTGCTCT+TGG - chr5_1:17498849-17498868 Msa0721080:intron 40.0%
!! ACTACTTTTGGCAGCTAAAG+CGG + chr5_1:17498886-17498905 None:intergenic 40.0%
CATTTACTCCAAGACTCACT+AGG - chr5_1:17499028-17499047 Msa0721080:CDS 40.0%
TAGACATACCTAGTGAGTCT+TGG + chr5_1:17499039-17499058 None:intergenic 40.0%
ACAAATAAGTCCATCAGACC+AGG - chr5_1:17499198-17499217 Msa0721080:intron 40.0%
AAACATTGAGAGTAAGGCCA+AGG - chr5_1:17499497-17499516 Msa0721080:intron 40.0%
AACATTGAGAGTAAGGCCAA+GGG - chr5_1:17499498-17499517 Msa0721080:intron 40.0%
GTGGATATTATCCTTTCCCT+TGG + chr5_1:17499517-17499536 None:intergenic 40.0%
!! TGGATGTTTTGAGCTCAATC+TGG + chr5_1:17499575-17499594 None:intergenic 40.0%
! CTTATGTTGAAGAGTACAGC+AGG + chr5_1:17499661-17499680 None:intergenic 40.0%
CTGCTGTACTCTTCAACATA+AGG - chr5_1:17499659-17499678 Msa0721080:intron 40.0%
GACAGCAAATTTCCAACAGA+AGG - chr5_1:17499980-17499999 Msa0721080:CDS 40.0%
AAGCTGAAAGATCAGTTGCA+AGG - chr5_1:17500211-17500230 Msa0721080:CDS 40.0%
AGCTGAAAGATCAGTTGCAA+GGG - chr5_1:17500212-17500231 Msa0721080:CDS 40.0%
TGAGAGAAAACTGAAAGAGC+AGG - chr5_1:17500382-17500401 Msa0721080:CDS 40.0%
GGAATCCTTGCTAAAACAAC+AGG - chr5_1:17500415-17500434 Msa0721080:CDS 40.0%
CAAGCTTATTACGAGTGAAG+TGG - chr5_1:17500492-17500511 Msa0721080:CDS 40.0%
! CTCCTTTTCAATGTATGGAG+GGG + chr5_1:17500553-17500572 None:intergenic 40.0%
CTGTTATGTTGAAGCCGTAA+AGG - chr5_1:17500728-17500747 Msa0721080:CDS 40.0%
TTATGTTGAAGCCGTAAAGG+TGG - chr5_1:17500731-17500750 Msa0721080:CDS 40.0%
! GCTTTTACCTATATCAGGTG+TGG + chr5_1:17500760-17500779 None:intergenic 40.0%
TTGGAGATTCATCACTTGTG+CGG + chr5_1:17500782-17500801 None:intergenic 40.0%
AAGCAGAACCTTGACTTATC+TGG + chr5_1:17500851-17500870 None:intergenic 40.0%
CTCAGCAGATGAGAAACAAA+AGG - chr5_1:17500892-17500911 Msa0721080:CDS 40.0%
CTATCACGTAAAGTGGATGA+CGG + chr5_1:17500960-17500979 None:intergenic 40.0%
CCGCCTAAAATTGTAAGAAC+TGG - chr5_1:17501002-17501021 Msa0721080:intron 40.0%
GGAACTTGACTAGTAATGAC+CGG + chr5_1:17501047-17501066 None:intergenic 40.0%
! ATCTCCACCTTTTCTTGTGA+TGG - chr5_1:17501223-17501242 Msa0721080:intron 40.0%
TCATCCATCACAAGAAAAGG+TGG + chr5_1:17501230-17501249 None:intergenic 40.0%
ACTCACTCATGATACTGTCA+CGG + chr5_1:17501573-17501592 None:intergenic 40.0%
! AGATGACGAGAAAGTGTGAG+CGG + chr5_1:17493760-17493779 None:intergenic 45.0%
! GGTTTGGGATTAGGGTTTGT+GGG + chr5_1:17493861-17493880 None:intergenic 45.0%
! TGGTTTGGGATTAGGGTTTG+TGG + chr5_1:17493862-17493881 None:intergenic 45.0%
! CAATGTTTTCCGCACGAATG+AGG - chr5_1:17494459-17494478 Msa0721080:CDS 45.0%
GAGCTGACTGATAAATCGAC+GGG + chr5_1:17494507-17494526 None:intergenic 45.0%
CGAGCTGACTGATAAATCGA+CGG + chr5_1:17494508-17494527 None:intergenic 45.0%
!! CGTCGATTTATCAGTCAGCT+CGG - chr5_1:17494506-17494525 Msa0721080:CDS 45.0%
! GTCGATTTATCAGTCAGCTC+GGG - chr5_1:17494507-17494526 Msa0721080:CDS 45.0%
ATTTATCAGTCAGCTCGGGT+GGG - chr5_1:17494511-17494530 Msa0721080:CDS 45.0%
CAAGATATTGTCCAGGAGGA+AGG + chr5_1:17494561-17494580 None:intergenic 45.0%
TAAATGGGCCGAAAGGAATG+AGG - chr5_1:17494611-17494630 Msa0721080:intron 45.0%
AAATGGGCCGAAAGGAATGA+GGG - chr5_1:17494612-17494631 Msa0721080:intron 45.0%
CTGGCAGGTTCTATCTGAAT+TGG - chr5_1:17494745-17494764 Msa0721080:intron 45.0%
CGACAATCAATCAGCTGTAG+TGG + chr5_1:17494800-17494819 None:intergenic 45.0%
AATGGAAGCCCAGTTGTTTG+TGG - chr5_1:17494869-17494888 Msa0721080:CDS 45.0%
ATGGAAGCCCAGTTGTTTGT+GGG - chr5_1:17494870-17494889 Msa0721080:CDS 45.0%
TGCAGATCCCACAAACAACT+GGG + chr5_1:17494880-17494899 None:intergenic 45.0%
ATGCAGATCCCACAAACAAC+TGG + chr5_1:17494881-17494900 None:intergenic 45.0%
TCAATGAAATCGCTTGGCAC+TGG + chr5_1:17495030-17495049 None:intergenic 45.0%
ACACCTCTAACCTGTGATGA+AGG + chr5_1:17495084-17495103 None:intergenic 45.0%
TACTATGCAGTGTGAGCTCA+AGG - chr5_1:17495250-17495269 Msa0721080:intron 45.0%
TCACTTGATCAAGCTCCATC+TGG + chr5_1:17495337-17495356 None:intergenic 45.0%
TGATGAAGAGTGAGCAGTCT+CGG - chr5_1:17495670-17495689 Msa0721080:CDS 45.0%
GGTTTATGCAGTACAGGAGT+TGG - chr5_1:17495746-17495765 Msa0721080:CDS 45.0%
CCGTTGTCGACCATTGAATA+AGG - chr5_1:17496117-17496136 Msa0721080:intron 45.0%
CAGCAAAAGATGGATGCCTT+GGG - chr5_1:17496182-17496201 Msa0721080:intron 45.0%
! AGATGGATGCCTTGGGATTT+TGG - chr5_1:17496189-17496208 Msa0721080:intron 45.0%
CTACTAGTCACAAACCCACA+CGG - chr5_1:17496364-17496383 Msa0721080:intron 45.0%
TACTAGTCACAAACCCACAC+GGG - chr5_1:17496365-17496384 Msa0721080:intron 45.0%
ACAAGTCGCAATGCCAACTT+CGG + chr5_1:17496486-17496505 None:intergenic 45.0%
TAAACTGAGGTGCATCTCGA+AGG - chr5_1:17496612-17496631 Msa0721080:intron 45.0%
CGAAGGATAGGGAAAAGAGT+TGG - chr5_1:17496629-17496648 Msa0721080:intron 45.0%
CACTATTGGCACCTATTTGG+AGG + chr5_1:17496914-17496933 None:intergenic 45.0%
AGGAATGGAGAGAAACCGAA+TGG - chr5_1:17497719-17497738 Msa0721080:intron 45.0%
ATGGTAATCTCTGTGCTGGA+TGG - chr5_1:17498030-17498049 Msa0721080:intron 45.0%
GCTTATGGACAAACAGGAAC+AGG - chr5_1:17498072-17498091 Msa0721080:intron 45.0%
CATATCTGTTAGTGTGCTCG+AGG - chr5_1:17498203-17498222 Msa0721080:intron 45.0%
! ATCAGAGACCTATTGGCTAC+GGG - chr5_1:17498240-17498259 Msa0721080:intron 45.0%
GAAGGACATCATCATGTACC+TGG - chr5_1:17498447-17498466 Msa0721080:intron 45.0%
AGTGTACCAAGAGCAAGCTT+TGG - chr5_1:17498748-17498767 Msa0721080:intron 45.0%
!! CAAGCTTTGGCTTGTGGATT+TGG - chr5_1:17498761-17498780 Msa0721080:intron 45.0%
CTTGCAAAGACTGATGTGCA+AGG - chr5_1:17498798-17498817 Msa0721080:intron 45.0%
CTCCCCTCCATACATTGAAA+AGG - chr5_1:17500548-17500567 Msa0721080:intron 45.0%
ACATGTGTCATGGCAGATGA+AGG - chr5_1:17500656-17500675 Msa0721080:CDS 45.0%
ATGGCAGATGAAGGAACTAG+AGG - chr5_1:17500665-17500684 Msa0721080:CDS 45.0%
! GTGCGGCTTTTACCTATATC+AGG + chr5_1:17500765-17500784 None:intergenic 45.0%
GTAAACCGCCAGATAAGTCA+AGG - chr5_1:17500840-17500859 Msa0721080:CDS 45.0%
CAGAACCTTGACTTATCTGG+CGG + chr5_1:17500848-17500867 None:intergenic 45.0%
ACTTGACTAGTAATGACCGG+CGG + chr5_1:17501044-17501063 None:intergenic 45.0%
AGGCTCAAGGAGTTAAAGAG+AGG - chr5_1:17501102-17501121 Msa0721080:intron 45.0%
GGCTCAAGGAGTTAAAGAGA+GGG - chr5_1:17501103-17501122 Msa0721080:intron 45.0%
!!! ATTTTTTAATTGTAATAATA+TGG - chr5_1:17494722-17494741 Msa0721080:intron 5.0%
!! TAACATAATATATAAATATA+AGG - chr5_1:17496750-17496769 Msa0721080:CDS 5.0%
GCGACTAATGAAGGAGCTGA+TGG - chr5_1:17494400-17494419 Msa0721080:CDS 50.0%
!! ACGAATGAGGCGATAGTGGA+AGG - chr5_1:17494472-17494491 Msa0721080:CDS 50.0%
!! AATGAGGCGATAGTGGAAGG+TGG - chr5_1:17494475-17494494 Msa0721080:CDS 50.0%
GATTTATCAGTCAGCTCGGG+TGG - chr5_1:17494510-17494529 Msa0721080:CDS 50.0%
AGGAGAGCGACAAAAGAGTC+AGG - chr5_1:17494902-17494921 Msa0721080:CDS 50.0%
! ATGAAATCGCTTGGCACTGG+TGG + chr5_1:17495027-17495046 None:intergenic 50.0%
AGCTGGGTGTACAACAGTTG+TGG - chr5_1:17496150-17496169 Msa0721080:intron 50.0%
GCAGCAAAAGATGGATGCCT+TGG - chr5_1:17496181-17496200 Msa0721080:intron 50.0%
!! TGCCTTGGGATTTTGGCAAC+TGG - chr5_1:17496196-17496215 Msa0721080:intron 50.0%
AGCCAGTTGCCAAAATCCCA+AGG + chr5_1:17496201-17496220 None:intergenic 50.0%
TCACAAACCCACACGGGTAT+GGG - chr5_1:17496371-17496390 Msa0721080:intron 50.0%
ATCATTCCCCATACCCGTGT+GGG + chr5_1:17496381-17496400 None:intergenic 50.0%
AATCATTCCCCATACCCGTG+TGG + chr5_1:17496382-17496401 None:intergenic 50.0%
TGAGGTGCATCTCGAAGGAT+AGG - chr5_1:17496617-17496636 Msa0721080:intron 50.0%
GAGGTGCATCTCGAAGGATA+GGG - chr5_1:17496618-17496637 Msa0721080:intron 50.0%
! GTGGAAGGCCTAAGCTTTGT+AGG - chr5_1:17496987-17497006 Msa0721080:intron 50.0%
!! AAATGTGCAGGGGGGTATCA+AGG + chr5_1:17497136-17497155 None:intergenic 50.0%
CTACGGGACCAGCATCAAAA+AGG - chr5_1:17498256-17498275 Msa0721080:intron 50.0%
!! ACCTGGTGTTGTAGAAGCCA+AGG - chr5_1:17498464-17498483 Msa0721080:intron 50.0%
ACCTTGGCTTCTACAACACC+AGG + chr5_1:17498468-17498487 None:intergenic 50.0%
GGAAGCAATGCTAGAGCAGT+TGG - chr5_1:17498525-17498544 Msa0721080:intron 50.0%
! CACAAGCCAAAGCTTGCTCT+TGG + chr5_1:17498757-17498776 None:intergenic 50.0%
!! CAAGAGCAAGCTTTGGCTTG+TGG - chr5_1:17498755-17498774 Msa0721080:intron 50.0%
!! CTTTGGCTTGTGGATTTGGC+AGG - chr5_1:17498765-17498784 Msa0721080:intron 50.0%
TGTGCAAGGAGAGCGACTTA+AGG - chr5_1:17498812-17498831 Msa0721080:intron 50.0%
AGTCCATCAGACCAGGATGT+CGG - chr5_1:17499205-17499224 Msa0721080:intron 50.0%
TGAGAGTAAGGCCAAGGGAA+AGG - chr5_1:17499503-17499522 Msa0721080:intron 50.0%
GAAAGAGCAGGAGCAGAACT+CGG - chr5_1:17500394-17500413 Msa0721080:CDS 50.0%
TCACGTGGCAACATGTGTCA+TGG - chr5_1:17500646-17500665 Msa0721080:CDS 50.0%
ACAAAGAGCGAGAGCAACAG+TGG - chr5_1:17500694-17500713 Msa0721080:CDS 50.0%
TGTTGAAGCCGTAAAGGTGG+CGG - chr5_1:17500734-17500753 Msa0721080:CDS 50.0%
! TCACGTAAAGTGGATGACGG+TGG + chr5_1:17500957-17500976 None:intergenic 50.0%
TAGGCTAACAACGAAACCGC+CGG - chr5_1:17501025-17501044 Msa0721080:intron 50.0%
AGCTAGCACAAGCAGAGATC+AGG - chr5_1:17501082-17501101 Msa0721080:intron 50.0%
ACAAGCAGAGATCAGGCTCA+AGG - chr5_1:17501089-17501108 Msa0721080:intron 50.0%
GTTTGTAAATGCGGGAGGGG+AGG - chr5_1:17494378-17494397 Msa0721080:CDS 55.0%
CCACTATCGCCTCATTCGTG+CGG + chr5_1:17494471-17494490 None:intergenic 55.0%
TGATTGTCGGGCCACTGTGA+AGG - chr5_1:17494811-17494830 Msa0721080:intron 55.0%
GGGCCACTGTGAAGGATGAT+GGG - chr5_1:17494819-17494838 Msa0721080:intron 55.0%
GGCCACTGTGAAGGATGATG+GGG - chr5_1:17494820-17494839 Msa0721080:intron 55.0%
CACCCCATCATCCTTCACAG+TGG + chr5_1:17494825-17494844 None:intergenic 55.0%
GTCACAAACCCACACGGGTA+TGG - chr5_1:17496370-17496389 Msa0721080:intron 55.0%
CACAAACCCACACGGGTATG+GGG - chr5_1:17496372-17496391 Msa0721080:intron 55.0%
ATGCTGGTCCCGTAGCCAAT+AGG + chr5_1:17498251-17498270 None:intergenic 55.0%
! GTGTGGACTGTACTGCAAGC+TGG - chr5_1:17498504-17498523 Msa0721080:intron 55.0%
GCAAGGAGAGCGACTTAAGG+AGG - chr5_1:17498815-17498834 Msa0721080:intron 55.0%
TCACCGACATCCTGGTCTGA+TGG + chr5_1:17499211-17499230 None:intergenic 55.0%
TCAGAGTCTCACCGACATCC+TGG + chr5_1:17499219-17499238 None:intergenic 55.0%
!! AGAGTGAGGGGCGTTGAGTT+AGG - chr5_1:17499259-17499278 Msa0721080:intron 55.0%
GGAGGGGAGGCGACTAATGA+AGG - chr5_1:17494391-17494410 Msa0721080:CDS 60.0%
CCGCACGAATGAGGCGATAG+TGG - chr5_1:17494468-17494487 Msa0721080:CDS 60.0%
CGGGCCACTGTGAAGGATGA+TGG - chr5_1:17494818-17494837 Msa0721080:intron 60.0%
AGGTGTGGCCGCCACCTTTA+CGG + chr5_1:17500745-17500764 None:intergenic 60.0%
GTGGCGGCCACACCTGATAT+AGG - chr5_1:17500750-17500769 Msa0721080:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 17493677 17501621 17493677 ID=Msa0721080;Name=Msa0721080
chr5_1 mRNA 17493677 17501621 17493677 ID=Msa0721080-mRNA-1;Parent=Msa0721080;Name=Msa0721080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=146|0.94|0.95|1|0.94|0.9|20|271|1055
chr5_1 exon 17493677 17493695 17493677 ID=Msa0721080-mRNA-1:exon:6693;Parent=Msa0721080-mRNA-1
chr5_1 exon 17493892 17494626 17493892 ID=Msa0721080-mRNA-1:exon:6692;Parent=Msa0721080-mRNA-1
chr5_1 exon 17494862 17494927 17494862 ID=Msa0721080-mRNA-1:exon:6691;Parent=Msa0721080-mRNA-1
chr5_1 exon 17495031 17495105 17495031 ID=Msa0721080-mRNA-1:exon:6690;Parent=Msa0721080-mRNA-1
chr5_1 exon 17495297 17495362 17495297 ID=Msa0721080-mRNA-1:exon:6689;Parent=Msa0721080-mRNA-1
chr5_1 exon 17495618 17495869 17495618 ID=Msa0721080-mRNA-1:exon:6688;Parent=Msa0721080-mRNA-1
chr5_1 exon 17495965 17496128 17495965 ID=Msa0721080-mRNA-1:exon:6687;Parent=Msa0721080-mRNA-1
chr5_1 exon 17496249 17496286 17496249 ID=Msa0721080-mRNA-1:exon:6686;Parent=Msa0721080-mRNA-1
chr5_1 exon 17496379 17496594 17496379 ID=Msa0721080-mRNA-1:exon:6685;Parent=Msa0721080-mRNA-1
chr5_1 exon 17496712 17496873 17496712 ID=Msa0721080-mRNA-1:exon:6684;Parent=Msa0721080-mRNA-1
chr5_1 exon 17497021 17497294 17497021 ID=Msa0721080-mRNA-1:exon:6683;Parent=Msa0721080-mRNA-1
chr5_1 exon 17499024 17499200 17499024 ID=Msa0721080-mRNA-1:exon:6682;Parent=Msa0721080-mRNA-1
chr5_1 exon 17499324 17499410 17499324 ID=Msa0721080-mRNA-1:exon:6681;Parent=Msa0721080-mRNA-1
chr5_1 exon 17499530 17499629 17499530 ID=Msa0721080-mRNA-1:exon:6680;Parent=Msa0721080-mRNA-1
chr5_1 exon 17499730 17499839 17499730 ID=Msa0721080-mRNA-1:exon:6679;Parent=Msa0721080-mRNA-1
chr5_1 exon 17499921 17500104 17499921 ID=Msa0721080-mRNA-1:exon:6678;Parent=Msa0721080-mRNA-1
chr5_1 exon 17500206 17500276 17500206 ID=Msa0721080-mRNA-1:exon:6677;Parent=Msa0721080-mRNA-1
chr5_1 exon 17500375 17500546 17500375 ID=Msa0721080-mRNA-1:exon:6676;Parent=Msa0721080-mRNA-1
chr5_1 exon 17500635 17500936 17500635 ID=Msa0721080-mRNA-1:exon:6675;Parent=Msa0721080-mRNA-1
chr5_1 exon 17501307 17501621 17501307 ID=Msa0721080-mRNA-1:exon:6674;Parent=Msa0721080-mRNA-1
chr5_1 five_prime_UTR 17501476 17501621 17501476 ID=Msa0721080-mRNA-1:five_prime_utr;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17501307 17501475 17501307 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17500635 17500936 17500635 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17500375 17500546 17500375 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17500206 17500276 17500206 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17499921 17500104 17499921 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17499730 17499839 17499730 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17499530 17499629 17499530 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17499324 17499410 17499324 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17499024 17499200 17499024 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17497021 17497294 17497021 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17496712 17496873 17496712 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17496379 17496594 17496379 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17496249 17496286 17496249 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17495965 17496128 17495965 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17495618 17495869 17495618 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17495297 17495362 17495297 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17495031 17495105 17495031 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17494862 17494927 17494862 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 CDS 17494144 17494626 17494144 ID=Msa0721080-mRNA-1:cds;Parent=Msa0721080-mRNA-1
chr5_1 three_prime_UTR 17493892 17494143 17493892 ID=Msa0721080-mRNA-1:three_prime_utr;Parent=Msa0721080-mRNA-1
chr5_1 three_prime_UTR 17493677 17493695 17493677 ID=Msa0721080-mRNA-1:three_prime_utr;Parent=Msa0721080-mRNA-1
Gene Sequence

>Msa0721080

ATGGAACCGATTCAATCCAACGAATTTCACAATGACCCACAAACCCTAATCCCAAACCAACAAGAAGATTCAGTAATGGAAGATGCAAACGATTCCTTGTTCGATTCTATGCTTGTTGATTCAAGTTCAAAACTCATTCAAAATGGCTTCACCAGATCTCAAAATTCAGCAGAGGAGTGTGTAATGTTTGTAAATGCGGGAGGGGAGGCGACTAATGAAGGAGCTGATGGAGTGAAGTTTCTGAGTGACACTTTTTTTGACGGTGGCAATGTTTTCCGCACGAATGAGGCGATAGTGGAAGGTGGAGATTACCCGTCGATTTATCAGTCAGCTCGGGTGGGAAGTTTTAGTTATAGAATTGATAACCTTCCTCCTGGACAATATCTTGTTGACCTGCATTTTGTTGAGATTATTAATGTAAATGGGCCGAAAGGAATGAGGGTGTTCAATGTTTACATACAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGCTGTTGGAGTCAACAAGCCACTACAGCTGATTGATTGTCGGGCCACTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAGAGTTTAAATGGAAGCCCAGTTGTTTGTGGGATCTGCATTAGGAGAGCGACAAAAGAGTCAGTTCCACCAGTGCCAAGCGATTTCATTGAATGTAACTACTGTGCCGCGCAGATTGAAATTCCTTCATCACAGATAAAAGTTATGCAAACAAAATCTACAGCAAAGTATGAAAATAAGATAAAGGAGCTTACTATGCAGTGTGAGCTCAAGGCAAAAGAATGCTATGAGGCATGGACGTCATTAACTGAAATGAGTAGGAAAATGGAAAAAGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACAGAACAAACTGCCGAAAAACAAGCTGAGAACCTGAGGAGTATTTCTAACAGATATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATCAGTTTACAGGAAAAAGTACAGTTGATGAAGAGTGAGCAGTCTCGGCTTTCCTTTGAAGCACATGAATGTGTTGATTCAATCCCTGAATTAAATAAGATGGTTTATGCAGTACAGGAGTTGGTTAAGCAGTGTGAAGATCTTAAAGTGAAGTATTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGAAACATCAGAGTTTTTTGCCGTTGTCGACCATTGAATAAGGTTGAAATGTCAGCTGGGTGTACAACAGTTGTGGATTTTGATGCAGCAAAAGATGGATGCCTTGGGATTTTGGCAACTGGCTCCTCTAAAAAATCTTTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGACAAACAGGAACAGGAAAAACATTTACTATGGAAGGAACAGAGCAAAATAGAGGTGTAAATTACAGGACTCTTGAGCATTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGTGTGCTCGAGGTTTACAATGAACAAATCAGAGACCTATTGGCTACGGGACCAGCATCAAAAAGGTTGGAGATAAAACAAAATTATGAAGGACATCATCATGTACCTGGTGTTGTAGAAGCCAAGGTTGACAACATAAGTGACGTGTGGACTGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGCAATAATGTTAATGAACATAGTAGTCGATCTCATTGCATGCTATGTATAATGGTAAAGACTAAAAATTTGATGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGCAGTGAGAGACTTGCAAAGACTGATGTGCAAGGAGAGCGACTTAAGGAGGCACAAAATATTAATCGTTCTCTTTCTGCTCTTGGAGATGTGATATCCGCTTTAGCTGCCAAAAGTAGTCACATTCCGTATAGGAATTCTAAGTTGACACATTTACTCCAAGACTCACTAGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTCGGTGAGACTCTGAGCTCGCTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAGGCGAACTTCAAAAGACAAAAGCAATGCTTGACAAAGCACGAAGTGAGTGCAGAAGTAAAGAAGAATCCTTGAGGAAATTAGAAGAAAGTTTGCAAAACATTGAGAGTAAGGCCAAGGGAAAGGATAATATCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCATGCAAAACCAATCAGAGAAACAAGTTTCTCAATTATGCGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTTCAACATAAGGTCAAAGAGCTAGAGAGAAAAATAAAAGAACAACTGCAGACAGAGACAGCAAATTTCCAACAGAAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTTCTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCGGAATCCTTGCTAAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGCAGCAAACTCACTGTTATGTTGAAGCCGTAAAGGTGGCGGCCACACCTGATATAGGTAAAAGCCGCACAAGTGATGAATCTCCAAATGATATTGAGAGTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAGATAAGTCAAGGTTCTGCTTTGTTAAAAGGGACTGATTCTACTCAGCAGATGAGAAACAAAAGGCAGTTAAGAAGCAATGACATTGAGAACAATTTAGTCGGGCCACCGTCATCCACTTTACGTGATAGAAAAATGACGAGGAAATCTGATCCGCCTAAAATTGTAAGAACTGGTAGGCTAACAACGAAACCGCCGGTCATTACTAGTCAAGTTCCTTTATCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGATAGTAAGAAAAAGATATGGTCAAGATAG
Protein sequence

>Msa0721080

MEPIQSNEFHNDPQTLIPNQQEDSVMEDANDSLFDSMLVDSSSKLIQNGFTRSQNSAEECVMFVNAGGEATNEGADGVKFLSDTFFDGGNVFRTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYLVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESLNGSPVVCGICIRRATKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKELTMQCELKAKECYEAWTSLTEMSRKMEKVQMELDQVTFKSLTTEQTAEKQAENLRSISNRYELDKKKWAEAIISLQEKVQLMKSEQSRLSFEAHECVDSIPELNKMVYAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAGCTTVVDFDAAKDGCLGILATGSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWTVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTGELQKTKAMLDKARSECRSKEESLRKLEESLQNIESKAKGKDNIHKNLQEKIKELEGQIELKTSMQNQSEKQVSQLCEKLKGKEETCCTLQHKVKELERKIKEQLQTETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWQQTHCYVEAVKVAATPDIGKSRTSDESPNDIESRILCSSNSVNRQISQGSALLKGTDSTQQMRNKRQLRSNDIENNLVGPPSSTLRDRKMTRKSDPPKIVRTGRLTTKPPVITSQVPLSHKRASTSRDQAQGVKERDSKKKIWSR*